View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10995_low_14 (Length: 220)
Name: NF10995_low_14
Description: NF10995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10995_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 42366158 - 42365955
Alignment:
| Q |
1 |
agtagtatatataaatttaacgaataagaagccatcgacgatgaatatatggtttgtcaaataaacagaattacagaaatggaaagaaaaaagttctaac |
100 |
Q |
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| T |
42366158 |
agtagtatatataaatttaacgaataaaaagccatcgacgatgaatatatggtttgtcaaataaacagaattacagaaatggaaagaaaaaagttctaac |
42366059 |
T |
|
| Q |
101 |
acctgttgtgtatacttagaggagcagcattggttttagtaccctcttcaaccaaagcagcacgtgccatagtgatcttgcttggaactaaaggagcatc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
42366058 |
acctgttgtgtatacttagaggagcagcattggttttagtaccctcttcaaccaaagcagcacgtgccatagtgatcttgcttggaactaaaggagcatc |
42365959 |
T |
|
| Q |
201 |
aaat |
204 |
Q |
| |
|
|||| |
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|
| T |
42365958 |
aaat |
42365955 |
T |
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