View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10996_high_15 (Length: 229)
Name: NF10996_high_15
Description: NF10996
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10996_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 15 - 213
Target Start/End: Complemental strand, 7803771 - 7803573
Alignment:
| Q |
15 |
atgaatgaaactaaattaaaaaatattattaaaatgagtgaagtgattacaaagagtaatatcaagcctttatataagctaactactactagtaataaac |
114 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |
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| T |
7803771 |
atgaatgaaactaaattaaaaaatattattaaaatgagtgaagtgattacaaagagtaatatcaagcctttatataagctaactgttactagtaattaac |
7803672 |
T |
|
| Q |
115 |
caactagccagaaagtgttcctaacacttccagctaaacatatcaaaacaaagagaaatgtgatagaaatacatcagctaaaaatgccatgaaggtagt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7803671 |
caactagccagaaagtgttcctaacacttccagctaaacatatcaaaacaaagagaaatgtgatagaaatacatcagctaaaaatgccatgaaggtagt |
7803573 |
T |
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