View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10997_low_1 (Length: 406)
Name: NF10997_low_1
Description: NF10997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10997_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 11 - 392
Target Start/End: Complemental strand, 10504033 - 10503652
Alignment:
| Q |
11 |
cacagatggttgcaaatttcatggttatttgtctctataatgtttctatcatctttggttcaaagctcacaaacttatgatcatgaatccttagaagact |
110 |
Q |
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| T |
10504033 |
cacaaatggttgcaaatttcatggttatttgtctctataatgtttctatcatctttggttcaaagctcacaaacttatgatcatgaatccttagaagact |
10503934 |
T |
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| Q |
111 |
tgctttgcaagcaagtgaacaaagatatagtaaatccaaaaacaggtgttttctacaacatttcacttccttctaactacacaggaatggaagttagagt |
210 |
Q |
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| T |
10503933 |
tgctttgcaagcaagtgaacaaagatatagtaaatccaaaaacaggtgttttctacaacatttcacttccttctaactacacaggaatggaagttagagt |
10503834 |
T |
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| Q |
211 |
tgttagattaagaacatcttctttttataaaagaggagtgaattctagtttcttcaatgttccaccacatgttgtgccacaacctattagaaaaagaatg |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10503833 |
tgttagattaagaacatcttctttttataaaagaggagtgaattctagtttcttcaatgttccaccacatgttgtgccacaacctattagaaaaagaatg |
10503734 |
T |
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| Q |
311 |
gctatactatatgaaaattttggaaattggtcttctcattacttcaatgtgcctaattacacaatggtggcacctgtttttg |
392 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10503733 |
gctatactatatgaaaattttggaaattggtcttctcattacttcaatgtgcctaattacacaatggtggcacctgtttttg |
10503652 |
T |
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