View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1099_low_28 (Length: 251)

Name: NF1099_low_28
Description: NF1099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1099_low_28
NF1099_low_28
[»] chr2 (5 HSPs)
chr2 (7-251)||(40641850-40642090)
chr2 (102-251)||(9782484-9782629)
chr2 (16-110)||(19812725-19812819)
chr2 (16-91)||(9782616-9782691)
chr2 (97-159)||(24869032-24869094)
[»] chr7 (18 HSPs)
chr7 (16-251)||(17225474-17225704)
chr7 (16-251)||(16917975-16918206)
chr7 (95-245)||(48353806-48353952)
chr7 (95-251)||(9609713-9609864)
chr7 (95-251)||(9837285-9837436)
chr7 (97-251)||(34242683-34242833)
chr7 (102-243)||(16921502-16921639)
chr7 (16-120)||(16916076-16916180)
chr7 (117-206)||(4437356-4437446)
chr7 (117-206)||(4444757-4444847)
chr7 (106-189)||(33558189-33558273)
chr7 (21-92)||(34242814-34242886)
chr7 (201-251)||(12246523-12246573)
chr7 (97-189)||(14939267-14939359)
chr7 (97-189)||(15366860-15366952)
chr7 (202-251)||(4070002-4070051)
chr7 (97-189)||(16382050-16382142)
chr7 (97-189)||(20587233-20587325)
[»] chr8 (8 HSPs)
chr8 (16-251)||(17283658-17283889)
chr8 (95-251)||(15931795-15931947)
chr8 (78-251)||(26009910-26010065)
chr8 (95-157)||(5851976-5852038)
chr8 (149-251)||(29296420-29296518)
chr8 (196-251)||(23228862-23228916)
chr8 (106-189)||(24554194-24554278)
chr8 (200-251)||(19333201-19333252)
[»] chr3 (8 HSPs)
chr3 (16-251)||(12020349-12020580)
chr3 (16-250)||(17203064-17203294)
chr3 (95-251)||(34558338-34558489)
chr3 (96-251)||(15548997-15549147)
chr3 (82-189)||(6230258-6230364)
chr3 (201-251)||(17760008-17760058)
chr3 (201-251)||(19061328-19061378)
chr3 (82-189)||(4147292-4147398)
[»] chr6 (9 HSPs)
chr6 (20-245)||(22363757-22363978)
chr6 (16-251)||(21621526-21621756)
chr6 (16-251)||(25918084-25918309)
chr6 (97-251)||(33539764-33539914)
chr6 (97-186)||(25649745-25649834)
chr6 (117-189)||(32350580-32350653)
chr6 (21-92)||(33539895-33539967)
chr6 (21-92)||(25649692-25649764)
chr6 (106-189)||(15006270-15006354)
[»] chr1 (4 HSPs)
chr1 (78-251)||(17607400-17607568)
chr1 (120-251)||(17022061-17022188)
chr1 (7-88)||(17021972-17022053)
chr1 (97-189)||(49998936-49999028)
[»] chr5 (8 HSPs)
chr5 (16-221)||(21227926-21228127)
chr5 (106-189)||(6455172-6455256)
chr5 (97-189)||(29912539-29912631)
chr5 (201-251)||(14343450-14343500)
chr5 (82-189)||(24082582-24082688)
chr5 (217-251)||(21224265-21224299)
chr5 (201-245)||(11765001-11765045)
chr5 (106-189)||(26561407-26561491)
[»] scaffold0025 (1 HSPs)
scaffold0025 (78-251)||(51790-51958)
[»] scaffold0006 (1 HSPs)
scaffold0006 (99-251)||(198929-199077)
[»] scaffold0010 (1 HSPs)
scaffold0010 (95-251)||(29575-29727)
[»] scaffold0107 (1 HSPs)
scaffold0107 (95-251)||(11907-12059)
[»] scaffold0031 (2 HSPs)
scaffold0031 (97-251)||(98731-98881)
scaffold0031 (50-92)||(98862-98905)
[»] scaffold0047 (1 HSPs)
scaffold0047 (95-251)||(1646-1798)
[»] chr4 (4 HSPs)
chr4 (96-251)||(18275287-18275438)
chr4 (95-251)||(19823999-19824150)
chr4 (97-189)||(38763267-38763360)
chr4 (149-251)||(42707283-42707380)
[»] scaffold1311 (1 HSPs)
scaffold1311 (106-251)||(219-360)
[»] scaffold0009 (1 HSPs)
scaffold0009 (196-251)||(68068-68123)
[»] scaffold0483 (1 HSPs)
scaffold0483 (160-251)||(5265-5352)
[»] scaffold0109 (1 HSPs)
scaffold0109 (160-251)||(50105-50192)
[»] scaffold0175 (1 HSPs)
scaffold0175 (137-251)||(6731-6840)
[»] scaffold0253 (2 HSPs)
scaffold0253 (97-189)||(9837-9929)
scaffold0253 (97-189)||(19262-19354)
[»] scaffold0028 (1 HSPs)
scaffold0028 (166-251)||(64037-64117)
[»] scaffold0021 (1 HSPs)
scaffold0021 (195-251)||(23611-23666)
[»] scaffold0219 (1 HSPs)
scaffold0219 (97-184)||(25564-25651)


Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 7 - 251
Target Start/End: Complemental strand, 40642090 - 40641850
Alignment:
Q  7 tccaagaatatacaatcaagtattcaccaggcacactttataacaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaactt 106  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40642090 tccaagataatacaatcaagtattcaccagacacactttataacaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaactt 40641991  T
Q  107 caacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    || |||||||||||    
T  40641990 caacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgcgcctaacaccgacacctacatgcatgtggt----atcaagcacaacaa 40641895  T
Q  207 cgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||||    
T  40641894 cgtctacgccgttaccccatgatgccaaccgcacatcacttgtaa 40641850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 9782629 - 9782484
Alignment:
Q  102 aacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcac 201  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||    |  || |||    
T  9782629 aacttcaacaattaccattcacatgcaacatatcaactcatgttaattatgcaatgcgtctaacaccgacaactacatgcatgtggt----accaaacac 9782534  T
Q  202 aacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9782533 aacaacgtctaggccgttaccccatgatgccaaccgcacatcatttgtaa 9782484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 19812819 - 19812725
Alignment:
Q  16 atacaatcaagtattcaccaggcacactttat-aacaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaacttcaac 110  Q
    |||||||||||||||||||| ||||| ||||| || ||||||||||||||||| |||||||||||||||||| | |||| ||||||||||||||||    
T  19812819 atacaatcaagtattcaccaagcaca-tttatcaaaaattcacatcattcacattctcatcacaacttcaacgaatattcattcacaaacttcaac 19812725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 9782691 - 9782616
Alignment:
Q  16 atacaatcaagtattcaccaggcacactttat-aacaattcacatcattcacaatctcatcacaacttcaacaatta 91  Q
    |||||||||||||||||||| ||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  9782691 atacaatcaagtattcaccaagcaca-tctatcaacaattcacatcattcacattctcatcacaacttcaacaatta 9782616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 24869032 - 24869094
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtg 159  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||| || |||||||||||    
T  24869032 tcacaagctccaacaattaccattcacatgcaacaaatacaactcatgtcaa-tatgcaatgtg 24869094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 5e-80; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 251
Target Start/End: Complemental strand, 17225704 - 17225474
Alignment:
Q  16 atacaatcaagtattcaccaggcacactttataacaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaacttcaacaatta 115  Q
    ||||||| |||||| ||||| ||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17225704 atacaattaagtatccaccaagcacatttattaataattcacatcattcacaatctcatcacaacttcaacaattattcattcacaaacttcaacaatta 17225605  T
Q  116 ccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctaggc 215  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||| ||||||||||||||    |  ||||||||||||||||||||    
T  17225604 ccattcacatgcaac-aatcaactcatgttaattatgcaatgcgcctaacactaacacctacatgcatgtggt----accaagcacaacaacgtctaggc 17225510  T
Q  216 cattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    | ||||||||||||||||||||||||||||||||||    
T  17225509 cgttaccccatgatgccaaccgcacatcatttgtaa 17225474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 16917975 - 16918206
Alignment:
Q  16 atacaatcaagtattcaccaggcacactttat-aacaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaacttcaacaatt 114  Q
    |||||||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  16917975 atacaatcaagtattccccaagcaca-tttatcaacaattcacatcattcacaatctcatcacaacttcaacaaatattcattcacaaacttcaacaatt 16918073  T
Q  115 accattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctagg 214  Q
    | ||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||    |  |||||||||||||||||||    
T  16918074 atcattcacattcaacaaatcaactcatgttaattatgcaatgcgcctaactccgacacctaaatgcatgtggt----accaagcacaacaacgtctagg 16918169  T
Q  215 ccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    || ||||||||||||| |||||||||||||| |||||    
T  16918170 ccgttaccccatgatgtcaaccgcacatcatatgtaa 16918206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 95 - 245
Target Start/End: Original strand, 48353806 - 48353952
Alignment:
Q  95 attcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaat 194  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||    |     
T  48353806 attcacaaacttcaacaattatcattcacatgcaacaaatcaactcatgttaattatgcaatgcgcctaactccgacacctacatgcatgtggt----ac 48353901  T
Q  195 taagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcat 245  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48353902 caagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcat 48353952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 95 - 251
Target Start/End: Original strand, 9609713 - 9609864
Alignment:
Q  95 attcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaat 194  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||    |     
T  9609713 attcacaaacttcaacaattatcattcacatgcaacaaatcaactcatgttagttatgcaatgcgcctaac-ccgacacttacatgcttgtggt----ac 9609807  T
Q  195 taagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
     |||||||||||||||||| || |||||||||||||||||||||||||||| |||||    
T  9609808 caagcacaacaacgtctagaccgttaccccatgatgccaaccgcacatcatatgtaa 9609864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 95 - 251
Target Start/End: Original strand, 9837285 - 9837436
Alignment:
Q  95 attcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaat 194  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||    |     
T  9837285 attcacaaacttcaacaattatcattcacatgcaacaaatcaactcatgttagttatgcaatgcgcctaac-ccgacacttacatgcttgtggt----ac 9837379  T
Q  195 taagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
     |||||||||||||||||| || |||||||||||||||||||||||||||| |||||    
T  9837380 caagcacaacaacgtctagaccgttaccccatgatgccaaccgcacatcatatgtaa 9837436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 34242833 - 34242683
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaatta 196  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||  |||||| ||||||| ||||||||||||||    |  |    
T  34242833 tcacaatcttcaacaattatcattcacatgcaacaattcaactcatgttaattatgcaatgcacctaactccgacacatacatgcatgtggt----acca 34242738  T
Q  197 agcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| |||||    
T  34242737 agcacaacaacgtctaggccgttaccccatgatgccaacagcacatcatatgtaa 34242683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 16921639 - 16921502
Alignment:
Q  102 aacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcac 201  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||    |  ||||||    
T  16921639 aacttcaacaattatcattcacatgcaacaaatcaactcatgttaattatgcaatgcgcctaactccgacacctacatgcatgtggt----accaagcac 16921544  T
Q  202 aacaacgtctaggccattaccccatgatgccaaccgcacatc 243  Q
    ||||| ||||||| | ||||||||||||||||||| ||||||    
T  16921543 aacaatgtctaggtcgttaccccatgatgccaaccacacatc 16921502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 16916076 - 16916180
Alignment:
Q  16 atacaatcaagtattcaccaggcacactttat-aacaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaacttcaacaatt 114  Q
    |||||||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  16916076 atacaatcaagtattccccaagcaca-tttatcaacaattcacatcattcacaatctcatcacaacttcaacaaatattcattcacaaacttcaacaatt 16916174  T
Q  115 accatt 120  Q
    | ||||    
T  16916175 atcatt 16916180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 4437356 - 4437446
Alignment:
Q  117 cattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaa 206  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||||  ||||||| |||||||||||||||  ||||||  |||||||    
T  4437356 cattcacatgcaacaattacaactcatgttaattatgcaatgcgcctaattccgacacatacatgcatgtggtaccaattaacaacaacaa 4437446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 4444757 - 4444847
Alignment:
Q  117 cattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaa 206  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||||  ||||||| |||||||||||||||  ||||||  |||||||    
T  4444757 cattcacatgcaacaattacaactcatgttaattatgcaatgcgcctaattccgacacatacatgcatgtggtaccaattaacaacaacaa 4444847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 33558189 - 33558273
Alignment:
Q  106 tcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||||| | |||||||||||||||| | |||||||| |||||||||||||| ||||||  ||||||| |||||||||||||||    
T  33558189 tcaacaatcatcattcacatgcaacaattacaactcatattaattatgcaatgcgcctaattccgacacatacatgcatgtggta 33558273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 34242886 - 34242814
Alignment:
Q  21 atcaagtattcaccaggcacactttataacaattcacatcattcacaatctcatcacaa-cttcaacaattat 92  Q
    |||||||||||||||  ||||||||  | |||||||||||||||||||||||||||||| |||||||||||||    
T  34242886 atcaagtattcaccaaacacacttttcatcaattcacatcattcacaatctcatcacaatcttcaacaattat 34242814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 12246523 - 12246573
Alignment:
Q  201 caacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||||||| | |||||||||||||||| ||||||||| |||||    
T  12246523 caacaacgtctaggccgtcaccccatgatgccaactgcacatcatatgtaa 12246573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 14939267 - 14939359
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||| |||||||||||| || ||||||||||||| | | |||||||| || ||||| ||| ||||||  ||||||| |||||||||||||||    
T  14939267 tcacaatcttcaacaattatcaatcacatgcaacaattacgactcatgtcaa-tatgctatgcgcctaattccgacacatacatgcatgtggta 14939359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 15366860 - 15366952
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||| |||||||||||| || ||||||||||||| | | |||||||| || ||||| ||| ||||||  ||||||| |||||||||||||||    
T  15366860 tcacaatcttcaacaattatcaatcacatgcaacaattacgactcatgtcaa-tatgctatgcgcctaattccgacacatacatgcatgtggta 15366952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 4070051 - 4070002
Alignment:
Q  202 aacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    ||||||||||||| | | |||||||||||||||| ||||||||| |||||    
T  4070051 aacaacgtctaggtcgtcaccccatgatgccaactgcacatcatatgtaa 4070002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 16382050 - 16382142
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||| |||||| ||||| |||||||||||||||| | | |||||||  || ||||| ||| ||||||  ||||||| |||||||||||||||    
T  16382050 tcacaatcttcaataattatcattcacatgcaacaattacgactcatgccaa-tatgctatgcgcctaattccgacacatacatgcatgtggta 16382142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 20587325 - 20587233
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||| |||||||||||| ||||||||| |||||| | | ||||||| ||| ||||| ||| ||||||  ||||||| || ||||||||||||    
T  20587325 tcacaaccttcaacaattatcattcacatccaacaattacgactcatgctaa-tatgctatgcgcctaattccgacacatatatgcatgtggta 20587233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 17283658 - 17283889
Alignment:
Q  16 atacaatcaagtattcaccaggcacactttat-aacaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaacttcaacaatt 114  Q
    |||||| ||||||| ||||| ||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  17283658 atacaaccaagtatccaccaagcaca-tttatcaacaattcatatcattcacaatctcatcataacttcaacaaatattcattcacaaacttcaacaatt 17283756  T
Q  115 accattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctagg 214  Q
    | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    |  |||||||||||||||||||    
T  17283757 atcattcacatgcaacaaatcaactcatgttaattatgcaatgcgcctaacaccgacgcctacatgcatgtggt----accaagcacaacaacgtctagg 17283852  T
Q  215 ccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    || ||||||||||||| |||| |||||||||||||||    
T  17283853 ccgttaccccatgatgtcaactgcacatcatttgtaa 17283889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 95 - 251
Target Start/End: Original strand, 15931795 - 15931947
Alignment:
Q  95 attcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaat 194  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||    |     
T  15931795 attcacaaaattcaacaattatcattcacatgcaacaaatcaactcatgttaattatgcaatgcgcctaactccgacacctacatgcatgtggt----ac 15931890  T
Q  195 taagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
     ||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||    
T  15931891 caagcacaacaacgtctaggccgttaccccatgatgccaacagcacatcatatgtaa 15931947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 26009910 - 26010065
Alignment:
Q  78 aacttcaacaattatttattcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttac 177  Q
    ||||||||||||| || ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| | ||||| |||    
T  26009910 aacttcaacaatt-ttcattcataaacttcaacaattagcatccacatgcaacaaatcaactcatgttaattatgcaatgcgcctaactctgacacctac 26010008  T
Q  178 atgcatgtggtattaattaagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
                      |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  26010009 -----------------caagcacaacaacgtctaggccattaccccatgatgccaactgcacatcatatgtaa 26010065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 5851976 - 5852038
Alignment:
Q  95 attcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatg 157  Q
    ||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  5851976 attcacaaacttcaacaattatcattcacatgcaacaaatcaatttatgttaattatgcaatg 5852038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 251
Target Start/End: Original strand, 29296420 - 29296518
Alignment:
Q  149 tatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttg 248  Q
    ||||||||| ||||||  | ||||| |||||||||||||||  |||    |||||||||||||||||| |||||||||||||||||| ||||||||| ||    
T  29296420 tatgcaatgcgcctaaatctgacacctacatgcatgtggtaccaat----cacaacaacgtctaggccgttaccccatgatgccaactgcacatcatatg 29296515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 23228916 - 23228862
Alignment:
Q  196 aagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  23228916 aagcacaacaacgtctaggccgttaccc-atgatgccaaccgcacatcatatgtaa 23228862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 24554278 - 24554194
Alignment:
Q  106 tcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||| ||||| |||||||||||||||| | | |||||||| || ||||| ||| ||||||  ||||||| |||||||||||||||    
T  24554278 tcaataattatcattcacatgcaacaattacgactcatgtcaaatatgctatgcgcctaattccgacacatacatgcatgtggta 24554194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 19333252 - 19333201
Alignment:
Q  200 acaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    ||||||||||||||||| | |||||||||||||||| | ||||||| |||||    
T  19333252 acaacaacgtctaggccttcaccccatgatgccaactgtacatcatatgtaa 19333201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 12020349 - 12020580
Alignment:
Q  16 atacaatcaagtattcaccaggcacactttat-aacaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaacttcaacaatt 114  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  12020349 atacaatcaagtattcaccaagcaca-tttatcaacaattcacaccattcacaatctcatcacaacttcaacaaatattcattcacaaacttcaacaatt 12020447  T
Q  115 accattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctagg 214  Q
    | |||||||||||||||||||||||||| ||||||||||||||  |||||| ||||||| ||||||||||||||    |  |||||||||||||||||||    
T  12020448 atcattcacatgcaacaaatcaactcattttaattatgcaatgcacctaactccgacacctacatgcatgtggt----accaagcacaacaacgtctagg 12020543  T
Q  215 ccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
     | ||||||||||||||||||||||||| || |||||    
T  12020544 tcgttaccccatgatgccaaccgcacattatatgtaa 12020580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 17203064 - 17203294
Alignment:
Q  16 atacaatcaagtattcaccaggcacactttat-aacaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaacttcaacaatt 114  Q
    |||||||||||||||||||| ||||| ||||| || |||||||||||||||||||||||||| |||||||||||  |||  |||||||||||||||||||    
T  17203064 atacaatcaagtattcaccaagcaca-tttatcaaaaattcacatcattcacaatctcatcaaaacttcaacaaacattccttcacaaacttcaacaatt 17203162  T
Q  115 accattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctagg 214  Q
    | ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||||    |  |||||||||||||| |||     
T  17203163 atcattcacatgcaacaaatcaactcatgttaattatgcaatgcgtctaactccgacacctacatgcatgtggt----accaagcacaacaacgtataga 17203258  T
Q  215 ccattaccccatgatgccaaccgcacatcatttgta 250  Q
     | |||||||||||||||||||||||||||| ||||    
T  17203259 acgttaccccatgatgccaaccgcacatcatatgta 17203294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 95 - 251
Target Start/End: Original strand, 34558338 - 34558489
Alignment:
Q  95 attcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaat 194  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||    |     
T  34558338 attcacaaacttcaacaattatcattcacatgccacaa-tcaactcatgttaattatgcaatgcgcctaactccgacacctacatgcatgtggt----ac 34558432  T
Q  195 taagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  34558433 caagcacaacaacgtctaggccgttaccccatgatgccaaccgcacatcatatgtaa 34558489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 96 - 251
Target Start/End: Original strand, 15548997 - 15549147
Alignment:
Q  96 ttcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaatt 195  Q
    ||||||||||||||||||||| |||| |||||||| | ||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||||    |      
T  15548997 ttcacaaacttcaacaattactattcgcatgcaaccattca-ctcatgttaattatgtaatgcgcctaacaccgacacctacatgcatgtggt----acc 15549091  T
Q  196 aagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15549092 aagcacaacaacgtctaggccgttaccccatgatgccaaccgcacatcatttgtaa 15549147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 6230364 - 6230258
Alignment:
Q  82 tcaacaattatttattcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatg 180  Q
    |||||||||||  |||||||| |||||||||||| ||||||||||||| || | | |||||||| || ||||| ||| ||||||  ||||||| ||||||    
T  6230364 tcaacaattatc-attcacaatcttcaacaattatcattcacatgcaaaaattacgactcatgtcaa-tatgctatgcgcctaattccgacacatacatg 6230267  T
Q  181 catgtggta 189  Q
    |||||||||    
T  6230266 catgtggta 6230258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 17760058 - 17760008
Alignment:
Q  201 caacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||||||| | |||||||||||||||| ||||||||| |||||    
T  17760058 caacaacgtctaggccgtcaccccatgatgccaactgcacatcatatgtaa 17760008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 19061378 - 19061328
Alignment:
Q  201 caacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||||||| | |||||||||||||||| ||||||||| |||||    
T  19061378 caacaacgtctaggccgtcaccccatgatgccaactgcacatcatatgtaa 19061328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 4147398 - 4147292
Alignment:
Q  82 tcaacaattatttattcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatg 180  Q
    |||||||||||  |||||||| |||||||||||| |||||||||||||||| | | |||||||  || ||||| ||| ||||||  || |||| ||||||    
T  4147398 tcaacaattatc-attcacaatcttcaacaattatcattcacatgcaacaattacgactcatgacaa-tatgctatgcgcctaattccaacacatacatg 4147301  T
Q  181 catgtggta 189  Q
    |||||||||    
T  4147300 catgtggta 4147292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 22363978 - 22363757
Alignment:
Q  20 aatcaagtattcaccaggcacactttat-aacaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaacttcaacaattacca 118  Q
    ||||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||| |||||| ||||||||| |||| ||    
T  22363978 aatcaagtattcatcaggcaca-tttatcaacaattcgcatcattcacaatctcatcacaacttcaacaaatattcattcacgaacttcaaccattatca 22363880  T
Q  119 ttcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctaggccat 218  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||    |  ||||||||||||||||||| | |    
T  22363879 ttcacatgcaacaaatcaactcatgttaattatgcaatgcgcctaactccgacacctacatgcatgtggt----accaagcacaacaacgtctaggtcgt 22363784  T
Q  219 taccccatgatgccaaccgcacatcat 245  Q
    |||||||||||||||||||||||||||    
T  22363783 taccccatgatgccaaccgcacatcat 22363757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 21621526 - 21621756
Alignment:
Q  16 atacaatcaagtattcaccaggcacactttata-acaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaacttcaacaatt 114  Q
    |||||||||| ||||||||| ||||| |||||  |||| |||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||    
T  21621526 atacaatcaaatattcaccaagcaca-tttatccacaaatcacatcattcacaaa-tcatcacaacttcaacaaatattcattcacaaacttcaacaatt 21621623  T
Q  115 accattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctagg 214  Q
    ||||||| |||||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||    |  ||| |||||||||||||||    
T  21621624 accattcgcatgcaacaattcaactcatgttaattatgcaatgcgcctaactccgacacctacatgcatgtggt----accaagaacaacaacgtctagg 21621719  T
Q  215 ccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    || |||||||||||| |||||||||||||||||||||    
T  21621720 ccgttaccccatgattccaaccgcacatcatttgtaa 21621756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 25918084 - 25918309
Alignment:
Q  16 atacaatcaagtattcaccaggcacactttataacaattcacatcattcacaatctcatcacaacttcaacaattatttattcaca-aacttcaacaatt 114  Q
    |||||||||| |||||| |||||||| ||   |||||||||||||||||||||       ||||||||||  | |||| |||||   || ||||||||||    
T  25918084 atacaatcaaatattcatcaggcacaattgtcaacaattcacatcattcacaa-------acaacttcaatgaatattcattcaaggaaattcaacaatt 25918176  T
Q  115 accattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctagg 214  Q
    |  || |||||||||||||||||||||| |||||||||||||| |||||||||||| || ||||||||||||||    |  |||||||||||||||||||    
T  25918177 aatatccacatgcaacaaatcaactcatattaattatgcaatgcgcctaacaccgatacctacatgcatgtggt----accaagcacaacaacgtctagg 25918272  T
Q  215 ccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    || |||||||||||||| ||||| |||||||||||||    
T  25918273 ccgttaccccatgatgctaaccgaacatcatttgtaa 25918309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 33539914 - 33539764
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaatta 196  Q
    |||||| |||||||||||| ||||| |||||||||| |||||||||||||||||||||||| ||||||  ||||||| ||||||||||||||    |  |    
T  33539914 tcacaatcttcaacaattatcattcgcatgcaacaattcaactcatgttaattatgcaatgcgcctaattccgacacatacatgcatgtggt----acca 33539819  T
Q  197 agcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||| |||||    
T  33539818 agcacaacaacgtctaggccgttaccccattatgccaactgcacatcatatgtaa 33539764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 25649745 - 25649834
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtg 186  Q
    |||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| | ||||| |||| || ||||||| ||||    
T  25649745 tcacaatcttcaacaattatcattcacatgcaacaattcaactcatgttaattatgcaatgcggctaactccgatacatacatgcttgtg 25649834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 32350580 - 32350653
Alignment:
Q  117 cattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||| ||||||||| | ||||||||||||||||||||||| ||||||  ||||||| |||||||||||||||    
T  32350580 cattcatatgcaacaattacaactcatgttaattatgcaatgcgcctaattccgacacatacatgcatgtggta 32350653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 33539967 - 33539895
Alignment:
Q  21 atcaagtattcaccaggcacactttataacaattcacatcattcacaatctcatcacaa-cttcaacaattat 92  Q
    |||||||||| |||| ||||||||   | |||||||||||||||||||||||||||||| |||||||||||||    
T  33539967 atcaagtattaaccaagcacacttatcatcaattcacatcattcacaatctcatcacaatcttcaacaattat 33539895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 25649692 - 25649764
Alignment:
Q  21 atcaagtattcaccaggcacactttataacaattcacatcattcacaatctcatcacaa-cttcaacaattat 92  Q
    ||||||||||||||| ||||||||   | ||||||| |||||||||||||| ||||||| |||||||||||||    
T  25649692 atcaagtattcaccaagcacacttatcatcaattcagatcattcacaatctgatcacaatcttcaacaattat 25649764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 15006354 - 15006270
Alignment:
Q  106 tcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||||| | |||||||||||||||| | |||||||||| |  ||||| ||| ||||||  ||||||| |||||||||||||||    
T  15006354 tcaacaatcatcattcacatgcaacaattacaactcatgtcagatatgctatgcgcctaattccgacacatacatgcatgtggta 15006270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 6e-55; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 17607400 - 17607568
Alignment:
Q  78 aacttcaacaattatttattcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttac 177  Q
    |||||||||||||||  ||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||    
T  17607400 aacttcaacaattatc-attcacaaacttcaacaattatcgttcacatgcaacaaatctactcatgttaattatgcaatgtgcctaactccgacacctac 17607498  T
Q  178 atgcatgtggtattaattaagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||    |  |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  17607499 atgcatgtggt----accaagcacaacaacatctaggccgttaccccatgatgccaaccgcacatcatttgtaa 17607568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 17022061 - 17022188
Alignment:
Q  120 tcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctaggccatt 219  Q
    ||||||||||||| | |  |||||| |||||||||||| ||||||||||||||| |||||||||||||||  ||    ||||||||||||||||||| ||    
T  17022061 tcacatgcaacaattaatttcatgtaaattatgcaatgcgcctaacaccgacacctacatgcatgtggtacaaa----gcacaacaacgtctaggccgtt 17022156  T
Q  220 accccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||||||||||||||||| |||||    
T  17022157 accccatgatgccaaccgcacatcatatgtaa 17022188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 17021972 - 17022053
Alignment:
Q  7 tccaagaatatacaatcaagtattcaccaggcacactttat-aacaattcacatcattcacaatctcatcacaacttcaacaa 88  Q
    |||||||  |||||||||||||||||||| ||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  17021972 tccaagataatacaatcaagtattcaccaagcata-tttatcaacaattcacatcattcacaatctcatcacaacttcaacaa 17022053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 49999028 - 49998936
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||| |||||||||||| |||||| ||||||||| | | ||||||||||| ||||| ||| ||||||  ||||||| |||||||||||||||    
T  49999028 tcacaatcttcaacaattatcattcatatgcaacaattacgactcatgttaa-tatgctatgcgcctaattccgacacatacatgcatgtggta 49998936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 21228127 - 21227926
Alignment:
Q  16 atacaatcaagtattcaccaggcacactttat-aacaattcacatcattcacaatctcatcacaacttcaacaattatttattcacaaacttcaacaatt 114  Q
    |||||||||| ||||||||| ||||| ||||| ||||||||| || ||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  21228127 atacaatcaaatattcaccaagcaca-tttatcaacaattcatattattcacattctcatcacaacttcaacaaatattcattcacaaacttcaacaatt 21228029  T
Q  115 accattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctagg 214  Q
    | ||| ||||||||||||||||||||||||||||||||||||| ||||||| | || |  ||||||||||||||    |  |||||||||||||||||||    
T  21228028 atcatacacatgcaacaaatcaactcatgttaattatgcaatgcgcctaactctgatatctacatgcatgtggt----accaagcacaacaacgtctagg 21227933  T
Q  215 ccattac 221  Q
    |||||||    
T  21227932 ccattac 21227926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 6455172 - 6455256
Alignment:
Q  106 tcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||||| | ||||||||||||| || | |||||||||| || ||||||||||||||||  ||||||| |||||||||||||||    
T  6455172 tcaacaatcaacattcacatgcaataattacaactcatgtcaactatgcaatgtgcctaattccgacacatacatgcatgtggta 6455256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 29912539 - 29912631
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||| |||||||||||| |||||||||||||||| | | |||||||| || ||||| ||| ||||||  ||||||| |||||||||||||||    
T  29912539 tcacaatcttcaacaattatcattcacatgcaacaattacgactcatgtcaa-tatgctatgcgcctaattccgacacatacatgcatgtggta 29912631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 14343500 - 14343450
Alignment:
Q  201 caacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||||||||| |||||||||||||||| | ||||||| |||||    
T  14343500 caacaacgtctaggccatcaccccatgatgccaactgaacatcatatgtaa 14343450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 24082582 - 24082688
Alignment:
Q  82 tcaacaattatttattcacaaacttcaacaattaccattcacatgcaacaaatca--actcatgttaattatgcaatgtgcctaacaccgacacttacat 179  Q
    |||||||||||  |||||||| |||||||||||| |||||||||||||| |||||  |||||||| || ||||| ||| ||||||  ||||||| |||||    
T  24082582 tcaacaattatc-attcacaatcttcaacaattatcattcacatgcaac-aatcacgactcatgtcaa-tatgctatgcgcctaattccgacacatacat 24082678  T
Q  180 gcatgtggta 189  Q
    |||| |||||    
T  24082679 gcatttggta 24082688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 21224299 - 21224265
Alignment:
Q  217 attaccccatgatgccaaccgcacatcatttgtaa 251  Q
    ||||||||||||||||||||||||||||| |||||    
T  21224299 attaccccatgatgccaaccgcacatcatatgtaa 21224265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 11765045 - 11765001
Alignment:
Q  201 caacaacgtctaggccattaccccatgatgccaaccgcacatcat 245  Q
    |||||||||||||||| | |||||||||||||||| | |||||||    
T  11765045 caacaacgtctaggccgtcaccccatgatgccaactgaacatcat 11765001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 26561491 - 26561407
Alignment:
Q  106 tcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||||||| |||||||||||||||| | | |||||||| || ||||| | | ||||||  ||||||| |||||||||| ||||    
T  26561491 tcaacaattatcattcacatgcaacaattacgactcatgtcaaatatgctacgcgcctaattccgacacatacatgcatgcggta 26561407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 51790 - 51958
Alignment:
Q  78 aacttcaacaattatttattcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttac 177  Q
    ||||||| |||||||  ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  51790 aacttcatcaattatc-attcacaaacttcaacaattatcattcacaagcaacaaatcaactcatgttaattatgcaatgcgcctaacaccgacacctac 51888  T
Q  178 atgcatgtggtattaattaagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    ||||||||| |    |  ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  51889 atgcatgtgat----accaagcacaacaatgtctaggccgttaccccatgatgccaaccgcacatcagttgtaa 51958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 99 - 251
Target Start/End: Complemental strand, 199077 - 198929
Alignment:
Q  99 acaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaag 198  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||    |  |||    
T  199077 acaaacttcaacaattatcattcacttgcaacaaatcaactcatgttaattatgcaatgcgcctaactccgacacctacatgcatgtggt----accaag 198982  T
Q  199 cacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  198981 cacaacaacgtctaggccgttaccccatgatgccaaccgcacatcatatgtaa 198929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 95 - 251
Target Start/End: Original strand, 29575 - 29727
Alignment:
Q  95 attcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaat 194  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||| ||||||||||||||    |     
T  29575 attcacaaacttcaacaattatcattcacatgcaacaaatcaactcatgtaaattatgcaatgcgcctaacaccagcacctacatgcatgtggt----ac 29670  T
Q  195 taagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
     ||| ||||||||||||||||| ||||||||||||||||||| |||||||| |||||    
T  29671 caagaacaacaacgtctaggccgttaccccatgatgccaaccacacatcatatgtaa 29727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 95 - 251
Target Start/End: Original strand, 11907 - 12059
Alignment:
Q  95 attcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaat 194  Q
    ||||||||||||||| || || |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||    |     
T  11907 attcacaaacttcaataaatatcattcacatgcaacaaatcaactcatgtcaattatgcaatgcgcctaactccgacacctacatgcatgtggt----ac 12002  T
Q  195 taagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
     ||||||||||||||||||| | |||||||||| |||||||| |||||||| |||||    
T  12003 caagcacaacaacgtctaggtcgttaccccatgttgccaaccacacatcatatgtaa 12059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 98881 - 98731
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaatta 196  Q
    |||||| |||||||||||| ||||||||| |||||  | |||||||| ||||||||||||||||||||| ||||||| ||||||||||||||    |  |    
T  98881 tcacaatcttcaacaattatcattcacatacaacattttaactcatgctaattatgcaatgtgcctaactccgacacatacatgcatgtggt----acca 98786  T
Q  197 agcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  98785 agcacaacaacgtctaggctgttaccccatgatgccaaccgcacatcatatgtaa 98731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 98905 - 98862
Alignment:
Q  50 caattcacatcattcacaatctcatcacaa-cttcaacaattat 92  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  98905 caattaacatcattcacaatctcatcacaatcttcaacaattat 98862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 95 - 251
Target Start/End: Complemental strand, 1798 - 1646
Alignment:
Q  95 attcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaat 194  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||| ||||||| |  |||| ||||||||||||||    |     
T  1798 attcacaaacttcaacaattatcattcatatgcaacagatcaactcatgtgaattatgcaatgcgcctaactctcacacctacatgcatgtggt----ac 1703  T
Q  195 taagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
     |||||||||||||||||||||  |||||| |||||||||||||||||||| |||||    
T  1702 caagcacaacaacgtctaggccgataccccttgatgccaaccgcacatcatatgtaa 1646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 96 - 251
Target Start/End: Original strand, 18275287 - 18275438
Alignment:
Q  96 ttcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaatt 195  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| | ||||  ||||||||||||||    |      
T  18275287 ttcacaaacttcaacaattatcattcacacgcaacaaatcaactcatgttaattatgcaatgcgcctaactctgacagctacatgcatgtggt----acc 18275382  T
Q  196 aagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    ||||||||||||||||||||  ||||  ||||||| |||||||||||||| |||||    
T  18275383 aagcacaacaacgtctaggctgttacaacatgatgtcaaccgcacatcatatgtaa 18275438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 95 - 251
Target Start/End: Complemental strand, 19824150 - 19823999
Alignment:
Q  95 attcacaaacttcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaat 194  Q
    ||||||||||||| | ||||| || ||||||||| ||| |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||    |     
T  19824150 attcacaaacttcgaaaattaacactcacatgca-caagtcaactcatgttaattatgcaatgcgcctaacaccgacactaacatgtatgtggt----ac 19824056  T
Q  195 taagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
     ||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||    
T  19824055 caagcacaacaacgtctaggacgtcaccccatgatgccaaccgcacatgatttgtaa 19823999  T

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Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 38763267 - 38763360
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||| |||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||  ||||||| || ||||||||||||    
T  38763267 tcacaatcttcaacaattatcattcacatgcaacaattacaactcatgttaattatgcaatgcgcctaattccgacacatatatgcatgtggta 38763360  T

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Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 251
Target Start/End: Original strand, 42707283 - 42707380
Alignment:
Q  149 tatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttg 248  Q
    ||||||||| ||||||   |||||| |||||||||||||||  ||    |||||||||||||||| || |||||| ||||||||||||||||||||| ||    
T  42707283 tatgcaatgcgcctaaatacgacacctacatgcatgtggtaccaa----gcacaacaacgtctagtccgttaccc-atgatgccaaccgcacatcatatg 42707377  T

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Target: scaffold1311 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold1311
Description:

Target: scaffold1311; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 106 - 251
Target Start/End: Original strand, 219 - 360
Alignment:
Q  106 tcaacaattaccattcacatgcaacaaatcaactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaaca 205  Q
    |||||||||| ||| ||| |||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||    |  ||||||||||    
T  219 tcaacaattaacatccacgtgcaacaaatgaactcatgttaattatgtaatgcgcctaacaccgacacctacatgcatgtggt----accaagcacaaca 314  T
Q  206 acgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    ||||||||| | ||||| |||||||||||| |||||||||||||||    
T  315 acgtctaggtcgttacctcatgatgccaactgcacatcatttgtaa 360  T

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Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 68068 - 68123
Alignment:
Q  196 aagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  68068 aagcacaacaacgtctaggccgttaccccatgatgccaaccgcacatcatatgtaa 68123  T

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Target: scaffold0483 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 5265 - 5352
Alignment:
Q  160 cctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||||| ||||||||||| |||  ||    ||||||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  5265 cctaacaccgacacctacatgcatgtagtacaaa----gcacaacaacgtctaggccgttaccccatgatgccaatcacacatcatttgtaa 5352  T

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Target: scaffold0109 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 50105 - 50192
Alignment:
Q  160 cctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||||||||| ||||||||||| |||  ||    ||||||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  50105 cctaacaccgacacctacatgcatgtagtacaaa----gcacaacaacgtctaggccgttaccccatgatgccaatcacacatcatttgtaa 50192  T

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Target: scaffold0175 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 251
Target Start/End: Complemental strand, 6840 - 6731
Alignment:
Q  137 actcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggtattaattaagcacaacaacgtctaggccattaccccatgatgccaacc 236  Q
    |||||||  ||| |||||||| ||||||  ||||||| |||||||||||||||  ||    ||||||||||||||||||| ||| ||||||||| |||||    
T  6840 actcatgcaaataatgcaatgcgcctaattccgacacctacatgcatgtggtaccaa----gcacaacaacgtctaggccgtta-cccatgatgtcaacc 6746  T
Q  237 gcacatcatttgtaa 251  Q
    ||||||||| |||||    
T  6745 gcacatcatatgtaa 6731  T

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Target: scaffold0253 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 9837 - 9929
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||| |||||||||||| |||||||||||||||| | | |||||||| || ||||| ||| ||||||  ||||||| |||||||||||||||    
T  9837 tcacaatcttcaacaattatcattcacatgcaacaattacgactcatgtcaa-tatgctatgcgcctaattccgacacatacatgcatgtggta 9929  T

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Target: scaffold0253; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 19262 - 19354
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatgtggta 189  Q
    |||||| |||||||||||| |||||||||||||||| | | |||||||| || ||||| ||| ||||||  ||||||| |||||||||||||||    
T  19262 tcacaatcttcaacaattatcattcacatgcaacaattacgactcatgtcaa-tatgctatgcgcctaattccgacacatacatgcatgtggta 19354  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 64117 - 64037
Alignment:
Q  166 accgacacttacatgcatgtggtattaattaagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||||||| |||||||||||||||  ||    || |||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  64117 accgacacctacatgcatgtggtaccaa----gcgcaacaacgtctaggccgttaccc-atgatgccaaccgcacatcatatgtaa 64037  T

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Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 23666 - 23611
Alignment:
Q  195 taagcacaacaacgtctaggccattaccccatgatgccaaccgcacatcatttgtaa 251  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  23666 taagtacaacaacgtctaggccgttaccc-atgatgccaaccgcacatcatatgtaa 23611  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 25651 - 25564
Alignment:
Q  97 tcacaaacttcaacaattaccattcacatgcaacaaat-caactcatgttaattatgcaatgtgcctaacaccgacacttacatgcatg 184  Q
    |||||| |||||||||||| |||||||||||||||| | | |||||||| || ||||| ||| ||||||  | ||||| ||||||||||    
T  25651 tcacaatcttcaacaattatcattcacatgcaacaattacgactcatgtcaa-tatgctatgcgcctaattctgacacatacatgcatg 25564  T

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