View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11006_high_8 (Length: 535)
Name: NF11006_high_8
Description: NF11006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11006_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 425; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 26 - 526
Target Start/End: Original strand, 22585910 - 22586416
Alignment:
| Q |
26 |
agttgatccaattcatgcaactaaacctaataaaattaccatgcaagttaacnnnnnnnt---gttgaagtgt--tcttaccttgttgatgaaatttgtt |
120 |
Q |
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| T |
22585910 |
agttggtccaattcatgcaactaaacctaatgaaattaccatgcaagttaacaaaaaaataatgttgaagtatattcttaccttgttgatgaaatttgtt |
22586009 |
T |
|
| Q |
121 |
gaaattggttactatggttagtaactaacaaagcattttcaatatctgagatggtaggacctgaataaatatttgaaatgaacctattaaaagcttggtc |
220 |
Q |
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| T |
22586010 |
gaaattggttactatggttagtaactaacaaagcattttcaatatctgaaatggtaggacctgaataaatatttgaaatgaacctattaaaagcttggtc |
22586109 |
T |
|
| Q |
221 |
ttttgaagattcatgacttaaattggctacttcagatactctctcatgtggcaacataagaagaggagtctcatcaactaaaagctctcttaaaagttca |
320 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
22586110 |
ttttgaagaatcatgacttaaattggctacttcagatactctctcatgtggcaacataagaagaggagactcatcaactaaaagctctcttaaaagttca |
22586209 |
T |
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| Q |
321 |
tcattctctgaccaattagaagacattattttctccatcattgtctttgacatggatgagtcaatcatatttattatgctttaaagagaaaatagtataa |
420 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
22586210 |
tcattctctgaccaattagaagacattattttctccatcattgtctttgacatggatgagtcaatcatatttattaggctttaaagagaaaatagtataa |
22586309 |
T |
|
| Q |
421 |
ttgaaatatgaatttaggtgaagtaaagatataataggctaatgagatatgaaagagtggagtagatatatgaagaggtggttgttatgcaatac-ttgt |
519 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
22586310 |
ttgaaatatgaatttaggtgaagtaaagatataataggctaatgagatatgaaagagtggagtagatatatgaagaggtggttgttatgcaatactttgt |
22586409 |
T |
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| Q |
520 |
ttcttct |
526 |
Q |
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||||||| |
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| T |
22586410 |
ttcttct |
22586416 |
T |
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