View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11006_low_35 (Length: 250)
Name: NF11006_low_35
Description: NF11006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11006_low_35 |
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Alignment Details
Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 40340893 - 40340798
Alignment:
| Q |
115 |
aaatattgttttgggttttatgttatatagctggaattggaatgggttgtacccattttctgtttcttg----aagattttattcgagtgatcctt |
206 |
Q |
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| T |
40340893 |
aaatattattttgggttttatgttatatagctggaattggaatgggttgtacccattttctgtttcttgtataaagattttatttgagtgatcctt |
40340798 |
T |
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