View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11007_low_3 (Length: 569)

Name: NF11007_low_3
Description: NF11007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11007_low_3
NF11007_low_3
[»] chr5 (33 HSPs)
chr5 (90-184)||(34371813-34371907)
chr5 (90-184)||(8641886-8641980)
chr5 (88-182)||(3886450-3886544)
chr5 (98-184)||(15512871-15512957)
chr5 (90-182)||(3886908-3887000)
chr5 (91-184)||(2474150-2474243)
chr5 (98-184)||(2474606-2474692)
chr5 (88-184)||(42788495-42788591)
chr5 (90-184)||(189269-189363)
chr5 (90-184)||(2194005-2194099)
chr5 (112-184)||(17445328-17445400)
chr5 (90-181)||(34372272-34372363)
chr5 (90-184)||(34867979-34868073)
chr5 (109-184)||(22557170-22557246)
chr5 (108-176)||(24182115-24182183)
chr5 (89-180)||(30684861-30684952)
chr5 (89-180)||(30720110-30720201)
chr5 (92-162)||(21883938-21884008)
chr5 (112-184)||(22556737-22556810)
chr5 (115-181)||(29679983-29680049)
chr5 (133-184)||(187759-187810)
chr5 (113-184)||(10927277-10927348)
chr5 (120-177)||(8391203-8391260)
chr5 (131-184)||(20039367-20039420)
chr5 (131-183)||(1880278-1880330)
chr5 (125-184)||(1822107-1822166)
chr5 (121-176)||(18750078-18750133)
chr5 (90-180)||(20858393-20858483)
chr5 (103-184)||(11757145-11757226)
chr5 (119-177)||(27646715-27646773)
chr5 (131-172)||(8366678-8366719)
chr5 (112-176)||(18304640-18304704)
chr5 (90-182)||(39147135-39147227)
[»] chr2 (29 HSPs)
chr2 (90-184)||(30966891-30966985)
chr2 (90-184)||(32377758-32377852)
chr2 (92-184)||(30966435-30966527)
chr2 (97-184)||(32377574-32377661)
chr2 (90-184)||(33175157-33175251)
chr2 (90-184)||(5399668-5399762)
chr2 (90-184)||(25337848-25337942)
chr2 (90-183)||(24818527-24818620)
chr2 (87-184)||(33771202-33771299)
chr2 (90-184)||(1912725-1912819)
chr2 (90-180)||(30963114-30963204)
chr2 (115-183)||(16379139-16379207)
chr2 (123-184)||(29259504-29259565)
chr2 (89-181)||(15639938-15640030)
chr2 (108-180)||(30961752-30961824)
chr2 (115-182)||(16379596-16379663)
chr2 (90-161)||(29804871-29804942)
chr2 (90-176)||(83226-83312)
chr2 (115-177)||(20502172-20502234)
chr2 (115-183)||(25433932-25434000)
chr2 (117-177)||(30963598-30963658)
chr2 (112-183)||(11389685-11389756)
chr2 (112-183)||(11406346-11406417)
chr2 (134-184)||(15620099-15620149)
chr2 (117-179)||(36924359-36924421)
chr2 (108-180)||(13191179-13191251)
chr2 (132-177)||(8181254-8181299)
chr2 (120-177)||(18875866-18875923)
chr2 (112-160)||(1952926-1952974)
[»] chr1 (30 HSPs)
chr1 (90-184)||(20054387-20054481)
chr1 (90-184)||(20054843-20054937)
chr1 (90-184)||(20055299-20055393)
chr1 (90-184)||(20055755-20055849)
chr1 (90-184)||(20056211-20056305)
chr1 (90-184)||(20056667-20056761)
chr1 (90-184)||(20057114-20057208)
chr1 (90-184)||(20057570-20057664)
chr1 (90-184)||(20060191-20060285)
chr1 (90-184)||(50002926-50003020)
chr1 (88-184)||(20845510-20845606)
chr1 (90-184)||(38341107-38341201)
chr1 (90-183)||(20053931-20054024)
chr1 (90-181)||(16451784-16451875)
chr1 (90-181)||(16460937-16461028)
chr1 (89-184)||(35759458-35759553)
chr1 (90-184)||(52250407-52250501)
chr1 (90-178)||(35759915-35760003)
chr1 (108-184)||(50002576-50002652)
chr1 (89-184)||(46693585-46693680)
chr1 (90-184)||(52250744-52250838)
chr1 (90-184)||(52251081-52251175)
chr1 (90-184)||(31822970-31823064)
chr1 (98-184)||(51372733-51372819)
chr1 (90-172)||(49996531-49996613)
chr1 (115-184)||(43056941-43057010)
chr1 (90-173)||(39582553-39582636)
chr1 (115-181)||(7547841-7547907)
chr1 (120-176)||(23180939-23180995)
chr1 (98-162)||(28181352-28181416)
[»] scaffold0389 (1 HSPs)
scaffold0389 (87-182)||(13381-13476)
[»] scaffold0322 (1 HSPs)
scaffold0322 (90-184)||(19167-19261)
[»] chr8 (35 HSPs)
chr8 (90-184)||(32292142-32292236)
chr8 (90-182)||(22548400-22548492)
chr8 (90-182)||(22548846-22548938)
chr8 (90-184)||(22026580-22026675)
chr8 (90-184)||(21315961-21316055)
chr8 (90-184)||(34308330-34308424)
chr8 (90-184)||(34308786-34308880)
chr8 (90-183)||(27022190-27022283)
chr8 (90-184)||(12827105-12827199)
chr8 (90-184)||(17103283-17103377)
chr8 (90-181)||(25147740-25147830)
chr8 (108-182)||(12100893-12100967)
chr8 (90-184)||(31283503-31283597)
chr8 (108-182)||(41658974-41659048)
chr8 (90-177)||(25148174-25148261)
chr8 (90-184)||(10844466-10844560)
chr8 (115-184)||(8080218-8080287)
chr8 (87-172)||(9251098-9251183)
chr8 (121-184)||(2044259-2044322)
chr8 (90-184)||(32292598-32292699)
chr8 (90-184)||(27926099-27926193)
chr8 (115-184)||(30527358-30527427)
chr8 (133-184)||(6463438-6463489)
chr8 (108-173)||(6466468-6466533)
chr8 (115-176)||(15818892-15818953)
chr8 (284-344)||(9883634-9883694)
chr8 (112-180)||(25307969-25308037)
chr8 (115-183)||(41913172-41913240)
chr8 (90-153)||(27021840-27021903)
chr8 (101-175)||(12119199-12119273)
chr8 (315-384)||(17290583-17290652)
chr8 (108-177)||(29117444-29117513)
chr8 (131-177)||(34688044-34688090)
chr8 (115-172)||(15567885-15567942)
chr8 (98-175)||(28453548-28453625)
[»] chr7 (36 HSPs)
chr7 (90-184)||(9125160-9125254)
chr7 (88-184)||(2941606-2941702)
chr7 (89-184)||(28496055-28496150)
chr7 (108-184)||(43233158-43233234)
chr7 (89-184)||(7646328-7646423)
chr7 (90-184)||(2193457-2193551)
chr7 (90-180)||(28495470-28495560)
chr7 (90-184)||(36422452-36422546)
chr7 (108-184)||(42515745-42515821)
chr7 (98-184)||(13122363-13122450)
chr7 (90-184)||(18833487-18833581)
chr7 (91-184)||(2189345-2189438)
chr7 (98-182)||(13124994-13125079)
chr7 (90-175)||(6747457-6747542)
chr7 (89-184)||(6718925-6719020)
chr7 (115-184)||(6747952-6748021)
chr7 (107-172)||(26419103-26419168)
chr7 (115-184)||(42515293-42515362)
chr7 (112-184)||(34405464-34405536)
chr7 (90-181)||(7646619-7646710)
chr7 (90-184)||(29038871-29038965)
chr7 (90-149)||(43776321-43776380)
chr7 (115-181)||(2611535-2611601)
chr7 (274-329)||(3312654-3312709)
chr7 (90-176)||(36422591-36422677)
chr7 (115-184)||(22529111-22529180)
chr7 (124-180)||(29357341-29357397)
chr7 (274-329)||(3310953-3311008)
chr7 (127-182)||(43776178-43776233)
chr7 (109-171)||(11372657-11372719)
chr7 (126-184)||(35474008-35474066)
chr7 (90-135)||(18833633-18833678)
chr7 (115-183)||(3305224-3305292)
chr7 (108-180)||(31406456-31406530)
chr7 (112-177)||(33316909-33316974)
chr7 (274-318)||(13695880-13695924)
[»] chr6 (35 HSPs)
chr6 (90-184)||(17027382-17027476)
chr6 (90-184)||(20850522-20850616)
chr6 (90-184)||(7912079-7912173)
chr6 (98-184)||(9352263-9352349)
chr6 (90-182)||(2681071-2681163)
chr6 (90-180)||(23986168-23986258)
chr6 (90-181)||(13191364-13191455)
chr6 (90-182)||(13492535-13492628)
chr6 (88-184)||(20896536-20896633)
chr6 (90-182)||(23776643-23776735)
chr6 (89-183)||(28780312-28780406)
chr6 (88-184)||(13492990-13493087)
chr6 (93-181)||(7912514-7912602)
chr6 (115-184)||(2891170-2891239)
chr6 (90-180)||(15929344-15929434)
chr6 (110-184)||(17730980-17731054)
chr6 (115-181)||(2890715-2890781)
chr6 (90-176)||(9440708-9440794)
chr6 (112-184)||(11062030-11062102)
chr6 (115-182)||(20126058-20126125)
chr6 (114-173)||(27334305-27334364)
chr6 (114-173)||(27395045-27395104)
chr6 (90-150)||(6331219-6331279)
chr6 (115-178)||(17851125-17851188)
chr6 (89-184)||(21312172-21312267)
chr6 (115-181)||(2720439-2720505)
chr6 (122-184)||(3652724-3652786)
chr6 (115-177)||(31415965-31416026)
chr6 (108-180)||(20732783-20732854)
chr6 (100-180)||(28583169-28583249)
chr6 (103-169)||(20735911-20735977)
chr6 (90-184)||(21311716-21311810)
chr6 (124-172)||(3884977-3885025)
chr6 (112-168)||(21557371-21557427)
chr6 (152-184)||(33774915-33774947)
[»] scaffold0243 (1 HSPs)
scaffold0243 (89-184)||(1421-1516)
[»] scaffold0022 (5 HSPs)
scaffold0022 (90-184)||(162985-163079)
scaffold0022 (93-181)||(162531-162620)
scaffold0022 (88-182)||(163274-163368)
scaffold0022 (90-180)||(69666-69756)
scaffold0022 (88-141)||(162481-162534)
[»] chr4 (47 HSPs)
chr4 (90-184)||(15268018-15268112)
chr4 (90-184)||(24629281-24629375)
chr4 (90-176)||(13266295-13266381)
chr4 (90-184)||(35477861-35477955)
chr4 (90-184)||(50398839-50398933)
chr4 (103-184)||(4127276-4127357)
chr4 (89-182)||(23350127-23350220)
chr4 (90-184)||(7678467-7678561)
chr4 (90-184)||(49998837-49998931)
chr4 (108-184)||(35871828-35871904)
chr4 (102-172)||(14571545-14571615)
chr4 (98-180)||(14572007-14572089)
chr4 (90-184)||(50398383-50398477)
chr4 (115-182)||(1645619-1645686)
chr4 (90-184)||(23943087-23943181)
chr4 (115-184)||(7381468-7381537)
chr4 (115-183)||(3169408-3169476)
chr4 (90-184)||(4127739-4127828)
chr4 (122-180)||(8467690-8467748)
chr4 (115-183)||(4414257-4414325)
chr4 (88-184)||(44470718-44470814)
chr4 (90-153)||(50399336-50399399)
chr4 (112-180)||(5810039-5810107)
chr4 (108-180)||(17628716-17628788)
chr4 (108-180)||(27578320-27578392)
chr4 (88-180)||(31816981-31817073)
chr4 (99-185)||(31817707-31817792)
chr4 (90-177)||(27578134-27578218)
chr4 (115-184)||(44471195-44471264)
chr4 (115-184)||(53854717-53854786)
chr4 (121-184)||(21067483-21067546)
chr4 (131-181)||(23942675-23942725)
chr4 (122-168)||(53996007-53996053)
chr4 (90-135)||(10668381-10668426)
chr4 (90-135)||(10668887-10668932)
chr4 (90-135)||(10882526-10882571)
chr4 (115-184)||(40607132-40607201)
chr4 (121-169)||(23976094-23976142)
chr4 (274-329)||(14645765-14645820)
chr4 (90-181)||(51331128-51331218)
chr4 (135-181)||(9423748-9423794)
chr4 (92-177)||(1464355-1464439)
chr4 (115-184)||(21067932-21068001)
chr4 (103-171)||(23091367-23091436)
chr4 (89-153)||(21220198-21220262)
chr4 (124-180)||(27578788-27578844)
chr4 (111-151)||(39102828-39102868)
[»] chr3 (40 HSPs)
chr3 (90-184)||(14820355-14820449)
chr3 (90-184)||(14814150-14814244)
chr3 (90-184)||(32227072-32227166)
chr3 (87-184)||(28561946-28562043)
chr3 (88-181)||(50347950-50348043)
chr3 (90-181)||(8067484-8067575)
chr3 (90-184)||(13150405-13150499)
chr3 (90-184)||(39653365-39653459)
chr3 (92-184)||(11179887-11179979)
chr3 (90-182)||(16811128-16811220)
chr3 (90-181)||(16811585-16811674)
chr3 (98-181)||(27187188-27187272)
chr3 (93-184)||(13149953-13150044)
chr3 (90-181)||(32227704-32227795)
chr3 (100-183)||(32386595-32386678)
chr3 (90-180)||(31284127-31284217)
chr3 (90-182)||(41473744-41473836)
chr3 (90-184)||(25248312-25248407)
chr3 (115-184)||(25230124-25230193)
chr3 (115-184)||(25237711-25237780)
chr3 (115-183)||(4067236-4067304)
chr3 (131-184)||(2911285-2911338)
chr3 (81-181)||(37045236-37045336)
chr3 (115-182)||(25239003-25239070)
chr3 (274-381)||(18534443-18534550)
chr3 (115-183)||(25238560-25238628)
chr3 (279-353)||(3593063-3593138)
chr3 (285-366)||(18705557-18705638)
chr3 (115-181)||(20884993-20885059)
chr3 (110-180)||(53150683-53150753)
chr3 (115-180)||(7477396-7477461)
chr3 (115-180)||(7494086-7494151)
chr3 (121-184)||(25230587-25230650)
chr3 (121-184)||(25238174-25238237)
chr3 (115-182)||(30529889-30529956)
chr3 (115-172)||(25230973-25231030)
chr3 (108-180)||(18318860-18318932)
chr3 (315-376)||(24177926-24177987)
chr3 (108-180)||(3900005-3900077)
chr3 (315-355)||(30993302-30993342)
[»] scaffold0020 (1 HSPs)
scaffold0020 (88-184)||(107312-107408)
[»] scaffold0557 (1 HSPs)
scaffold0557 (88-184)||(2297-2393)
[»] scaffold0168 (1 HSPs)
scaffold0168 (90-184)||(2943-3037)
[»] scaffold0040 (1 HSPs)
scaffold0040 (90-184)||(2061-2155)
[»] scaffold0002 (2 HSPs)
scaffold0002 (90-184)||(154503-154597)
scaffold0002 (93-184)||(154958-155049)
[»] scaffold0024 (1 HSPs)
scaffold0024 (90-183)||(105922-106015)
[»] scaffold0018 (1 HSPs)
scaffold0018 (90-183)||(10501-10594)
[»] scaffold1519 (1 HSPs)
scaffold1519 (88-184)||(1550-1646)
[»] scaffold0277 (1 HSPs)
scaffold0277 (89-184)||(14552-14647)
[»] scaffold0005 (3 HSPs)
scaffold0005 (98-180)||(245287-245369)
scaffold0005 (102-172)||(245761-245831)
scaffold0005 (274-329)||(171470-171525)
[»] scaffold0499 (1 HSPs)
scaffold0499 (112-184)||(1924-1996)
[»] scaffold0217 (1 HSPs)
scaffold0217 (89-181)||(514-606)
[»] scaffold0281 (1 HSPs)
scaffold0281 (278-354)||(1834-1911)
[»] scaffold0333 (3 HSPs)
scaffold0333 (90-184)||(5221-5315)
scaffold0333 (115-184)||(4761-4830)
scaffold0333 (115-184)||(5323-5393)
[»] scaffold0047 (2 HSPs)
scaffold0047 (115-184)||(17474-17543)
scaffold0047 (115-184)||(18011-18080)
[»] scaffold0094 (1 HSPs)
scaffold0094 (274-371)||(48227-48325)
[»] scaffold0065 (2 HSPs)
scaffold0065 (108-162)||(62976-63030)
scaffold0065 (90-151)||(67214-67275)
[»] scaffold0442 (1 HSPs)
scaffold0442 (92-159)||(1-68)
[»] scaffold0088 (1 HSPs)
scaffold0088 (278-364)||(35516-35604)


Alignment Details
Target: chr5 (Bit Score: 79; Significance: 1e-36; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 34371907 - 34371813
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  34371907 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccg 34371813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 8641886 - 8641980
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  8641886 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 8641980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 3886450 - 3886544
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  3886450 agtgtaacatcccagaatgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttac 3886544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 15512871 - 15512957
Alignment:
Q  98 cccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  15512871 cccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcaacgtattttgtcctcactcgcacgcttaccg 15512957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 3886908 - 3887000
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||    
T  3886908 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttgtcagcgtgttttgtcctcactcgcacgcttac 3887000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 2474243 - 2474150
Alignment:
Q  91 gtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||| |||| |||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  2474243 gtaacatcccatactgcttttaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 2474150  T

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Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 2474692 - 2474606
Alignment:
Q  98 cccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||| ||||||||    
T  2474692 cccagactgcttttaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttttcctcactcgcatgcttaccg 2474606  T

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Target: chr5; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 42788495 - 42788591
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||||  ||||||||| |||||||| |||||||||||| ||||||||    
T  42788495 agtgtaacatcccagactgctttcaggattgtcgactgactccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcaagcttaccg 42788591  T

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Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 189363 - 189269
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||  |||||||||||| |||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||| ||||||    
T  189363 tgtaacatcccagactactttcaggattgcggactgatcccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccg 189269  T

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Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 2194099 - 2194005
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||| |||| |||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||| |||||||    
T  2194099 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacacttaccg 2194005  T

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Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 17445328 - 17445400
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  17445328 aggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 17445400  T

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Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 34372363 - 34372272
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    |||||||  |||||||| |||||||||||||||||||| ||| |||||||||| ||| |||||| |||||||| ||||||||||||||||||    
T  34372363 tgtaacattccagactgctttcaggattgccgactgacgccataaaccaacacgagtattttcagcgtgttttttcctcactcgcacgctta 34372272  T

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Target: chr5; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 34868073 - 34867979
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||||||||||||| || |||||||| |||||| |||||||| | |||||||| |||| ||| ||||||||||||    
T  34868073 tgtaacatcccagactgctttcaggattgccgacggatcccacaaatcaacacgagtctttttagcgtgttttgtccttacttgcacgcttaccg 34867979  T

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Target: chr5; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 22557246 - 22557170
Alignment:
Q  109 ttcaggattgccgactgaccccacaaaccaacactagtctttt-caacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||||| |||||||||| |||||||||||| |||||||| || |||||||| |||||||||||||||||||||    
T  22557246 ttcaggattgtcgactgaccctacaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccg 22557170  T

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Target: chr5; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 24182115 - 24182183
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcac 176  Q
    ||||||||||| ||||| ||||||||||||||||| | ||||||||||||||||| |||||||||||||    
T  24182115 tttcaggattgtcgactaaccccacaaaccaacacgaatcttttcaacgtgttttatcctcactcgcac 24182183  T

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Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 30684861 - 30684952
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||||||| | || |||| ||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||| ||||| || ||||||||    
T  30684861 gtgtaacatctcaaactgctttcaagattgccgattgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcgcttgcacgctt 30684952  T

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Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 30720110 - 30720201
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||||||| ||||||||| ||||| ||||| ||| |||| |||||||||||||  |||||||||| |||||||| ||||| |||||||||||    
T  30720110 gtgtaacatcccagactgctttcaagattgtcgattgactccacaaaccaacaggagtcttttcagcgtgttttgtcctcgctcgcacgctt 30720201  T

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Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 21883938 - 21884008
Alignment:
Q  92 taacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgtttt 162  Q
    ||||| ||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  21883938 taacatcccagactgctttcaagattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 21884008  T

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Target: chr5; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 22556810 - 22556737
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtctttt-caacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||||| |||||||||||| |||||||| || |||||||| |||||||||||||||||||||    
T  22556810 aggattgtcgactgaccctacaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccg 22556737  T

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Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 29679983 - 29680049
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||||| |||||| | |||||||||    
T  29679983 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcatttgcacgctta 29680049  T

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Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 187810 - 187759
Alignment:
Q  133 aaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  187810 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 187759  T

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Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 10927277 - 10927348
Alignment:
Q  113 ggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||| |||| ||||| |||||||||||| |||||||||| |||||||| |||||| || |||||||||||    
T  10927277 ggattgtcgaccgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccg 10927348  T

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Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 8391203 - 8391260
Alignment:
Q  120 cgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    |||||||||||||||| |||||| |||||| ||| |||||||| ||||||||||||||    
T  8391203 cgactgaccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactcgcacg 8391260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 20039367 - 20039420
Alignment:
Q  131 acaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||||||  |||||||||| |||||||| |||||||||||||||||||||    
T  20039367 acaaaccaacatgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 20039420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 1880330 - 1880278
Alignment:
Q  131 acaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    |||||||||||| |||||||||| |||||||| ||||||||||| ||||||||    
T  1880330 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgctcgcttacc 1880278  T

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Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 1822166 - 1822107
Alignment:
Q  125 gaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||| || |||||||||||    
T  1822166 gaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccg 1822107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 18750078 - 18750133
Alignment:
Q  121 gactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcac 176  Q
    |||||||||||||||||||| | ||||||||||  ||||||| |||||||||||||    
T  18750078 gactgaccccacaaaccaactcgagtcttttcagtgtgttttgtcctcactcgcac 18750133  T

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Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 20858393 - 20858483
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||| |||| |||  ||||||||||| |||||||||  ||||| |||||| ||| |||||| |||||||| |||||||| ||| ||||    
T  20858393 tgtaacatcccaaacttctttcaggattgtcgactgacctaacaaatcaacacgagtattttcagcgtgttttgtcctcactagcatgctt 20858483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 11757145 - 11757226
Alignment:
Q  103 actgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| ||| ||||||||||||||||||| ||||||||||  |||||||| | ||  |||  ||||||||| |||||||||||    
T  11757145 actgcttttaggattgccgactgaccccgcaaaccaacaagagtcttttaagcggatttcgtcctcactcacacgcttaccg 11757226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 27646715 - 27646773
Alignment:
Q  119 ccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    ||||||||||  |||||||||||  |||||||||| | |||||| ||||||||||||||    
T  27646715 ccgactgaccatacaaaccaacatgagtcttttcagcatgttttgtcctcactcgcacg 27646773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 8366719 - 8366678
Alignment:
Q  131 acaaaccaacactagtcttttcaacgtgttttctcctcactc 172  Q
    |||||||||||| ||||||||||||||||||| || ||||||    
T  8366719 acaaaccaacacgagtcttttcaacgtgttttgtcgtcactc 8366678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 18304704 - 18304640
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcac 176  Q
    |||||||||  ||||||||| ||| |||||| ||| | |||| |||||||| |||||||||||||    
T  18304704 aggattgccatctgaccccagaaatcaacacgagtttgttcagcgtgttttgtcctcactcgcac 18304640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 39147227 - 39147135
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    ||||||| |||||||   ||| || |||||||| |||||| |||||||||||  |||||||  | ||| |||| ||||| |||||||||||||    
T  39147227 tgtaacatcccagacgactttaagcattgccgattgaccctacaaaccaacatgagtctttctagcgttttttgtcctctctcgcacgcttac 39147135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 3e-34; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 30966985 - 30966891
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  30966985 tgtaacatcccagactgctttcaggattgccgactgactccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccg 30966891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 32377758 - 32377852
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  32377758 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 32377852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 30966527 - 30966435
Alignment:
Q  92 taacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  30966527 taacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccg 30966435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 32377574 - 32377661
Alignment:
Q  97 acccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||||||||    
T  32377574 acccagactgcttttaggattgccgactgaccccacaaaccaacacgagttttttcagcgtgttttgtcctcactcgcacgcttaccg 32377661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 33175251 - 33175157
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||| ||||| ||||||| || |||||||| |||||||||||||||||||||    
T  33175251 tgtaacatcccagactgctttcaggattgccgactgaccctacaaactaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccg 33175157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 5399668 - 5399762
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||| ||||||| || |||||||| | |||||||||||||||||||    
T  5399668 tgtaacatcccagactgcttttaggattgtcgactgaccccacaaaccaacacaagtctttccagcgtgttttgttctcactcgcacgcttaccg 5399762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 25337848 - 25337942
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| | ||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  25337848 tgtaacatctcagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 25337942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 90 - 183
Target Start/End: Complemental strand, 24818620 - 24818527
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||| ||| ||||  |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  24818620 tgtaacatccccgactactttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacc 24818527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 33771299 - 33771202
Alignment:
Q  87 gagtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||||| |||||| || |||||| ||||||| |||||||||||||||||||| ||||||||||  ||||||| |||||||||||| ||||||||    
T  33771299 gagtgtaacatcccagattgctttcagaattgccggctgaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcatgcttaccg 33771202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 1912819 - 1912725
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||   ||| || ||||||||||||| | |||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  1912819 tgtaacatcccagacgactttaagcattgccgactgactctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccg 1912725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 30963114 - 30963204
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||| || | |||| ||||| ||||||||| ||||| ||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  30963114 tgtaacatccaaaactgctttcatgattgccgattgacctcacaaaccaacacgagtcttttcaacgtattttatcctcactcgcacgctt 30963204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 16379207 - 16379139
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    |||| |||||||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  16379207 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacc 16379139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 29259504 - 29259565
Alignment:
Q  123 ctgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| ||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  29259504 ctgatcccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccg 29259565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 15640030 - 15639938
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    |||||||| |||||||   ||| || ||||||||||||||| || ||||||||| |||||||||  |||||||| ||||||||||||||||||    
T  15640030 gtgtaacatcccagacgactttaagcattgccgactgaccctaccaaccaacacgagtcttttctgcgtgttttgtcctcactcgcacgctta 15639938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 30961752 - 30961824
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||| ||||||||| ||||||||||||| ||||| ||||||||||  ||||||| |||||||||||||||||    
T  30961752 tttcatgattgccgattgaccccacaaactaacacaagtcttttcactgtgttttgtcctcactcgcacgctt 30961824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 16379663 - 16379596
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    |||| ||| |||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  16379663 attgtcgaatgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttac 16379596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 29804942 - 29804871
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttt 161  Q
    ||||||| ||||||||| |||||| |||| ||||||| ||||||||||||||| |||||||||| |||||||    
T  29804942 tgtaacatcccagactgctttcagcattgtcgactgatcccacaaaccaacacgagtcttttcagcgtgttt 29804871  T

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Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 83312 - 83226
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcac 176  Q
    ||||||| | ||||||  ||||| ||||||||| | ||||||||||||||||  |||||| |||||||||||| |||||||||||||    
T  83312 tgtaacatctcagactactttcatgattgccgaataaccccacaaaccaacataagtcttatcaacgtgttttgtcctcactcgcac 83226  T

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Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 20502234 - 20502172
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    ||||||||||||||| |||||| ||||| |||||||||| |||||||| ||||||||||||||    
T  20502234 attgccgactgaccctacaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacg 20502172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 25433932 - 25434000
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||||||||||| |||||||||||| | |||||||| |||||||| |||| |||| ||||||||||    
T  25433932 attgccgactgaccctacaaaccaacacgaatcttttcagcgtgttttgtccttactcacacgcttacc 25434000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 30963598 - 30963658
Alignment:
Q  117 tgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    |||||||||| |||||||||||| || ||||||||||  ||||||| ||||||||||||||    
T  30963598 tgccgactgatcccacaaaccaaaacgagtcttttcactgtgttttgtcctcactcgcacg 30963658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 11389756 - 11389685
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||| ||||||||||||||||||||||  ||| |||||| | |||||| | |||||||||| |||||||    
T  11389756 aggattgtcgactgaccccacaaaccaacatgagttttttcagcatgttttattctcactcgcatgcttacc 11389685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 11406417 - 11406346
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||| ||||||||||||||||||||||  ||| |||||| | |||||| | |||||||||| |||||||    
T  11406417 aggattgtcgactgaccccacaaaccaacatgagttttttcagcatgttttattctcactcgcatgcttacc 11406346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 15620149 - 15620099
Alignment:
Q  134 aaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| |||||||||| || ||||| |||||||||||||||||||||    
T  15620149 aaccaacacgagtcttttcagcgagttttgtcctcactcgcacgcttaccg 15620099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 36924359 - 36924421
Alignment:
Q  117 tgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgct 179  Q
    |||||||| || | |||||||||||| ||||||| || |||||||| ||||||||||||||||    
T  36924359 tgccgactaactctacaaaccaacacgagtctttccagcgtgttttgtcctcactcgcacgct 36924421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 13191251 - 13191179
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||| ||||| |||||||| ||| ||||||||||||||||||| | |||||||| ||| || || |||||||    
T  13191251 tttcaagattgtcgactgactccataaaccaacactagtctttttagcgtgttttgtccgcattcacacgctt 13191179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 8181254 - 8181299
Alignment:
Q  132 caaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    ||||||||||| |||||||||| |||||||| |||||||| |||||    
T  8181254 caaaccaacacgagtcttttcagcgtgttttgtcctcacttgcacg 8181299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 18875866 - 18875923
Alignment:
Q  120 cgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    |||||| ||||||||||||||||  |||||| ||  ||||||| ||||||||||||||    
T  18875866 cgactgtccccacaaaccaacacgtgtctttacagtgtgttttgtcctcactcgcacg 18875923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 1952974 - 1952926
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgtt 160  Q
    |||| ||||||||||||||||||||||||||  ||||||| | ||||||    
T  1952974 aggagtgccgactgaccccacaaaccaacacgggtctttttagcgtgtt 1952926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 3e-34; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 20054387 - 20054481
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  20054387 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 20054481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 20054843 - 20054937
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  20054843 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 20054937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 20055299 - 20055393
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  20055299 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 20055393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 20055755 - 20055849
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  20055755 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 20055849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 20056211 - 20056305
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  20056211 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 20056305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 20056667 - 20056761
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  20056667 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 20056761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 20057114 - 20057208
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  20057114 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 20057208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 20057570 - 20057664
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  20057570 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 20057664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 20060191 - 20060285
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || |||||||| |||||||||||||||||||||    
T  20060191 tgtaacaccccagactgctttcaggattgccgactgaccccacaaaccaacacgagtctttccatcgtgttttgtcctcactcgcacgcttaccg 20060285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 50002926 - 50003020
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  50002926 tgtaacatcccagactgctttcaggattgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 50003020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 20845510 - 20845606
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| | ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  20845510 agtgtaacatctcagactgctttcaagattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 20845606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 38341201 - 38341107
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||  |||||||| |||||||||||||||||||||    
T  38341201 tgtaacatcccagactgctttcaggattgccgactgaccccataaaccaacacgagtcttttccgcgtgttttgtcctcactcgcacgcttaccg 38341107  T

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Target: chr1; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 20053931 - 20054024
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| | |||||| ||||||||||||||||||||    
T  20053931 tgtaacatcccagactgctttcaggattgtcgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttacc 20054024  T

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Target: chr1; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 16451784 - 16451875
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| || |||| ||||||||||    
T  16451784 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgctta 16451875  T

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Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 16460937 - 16461028
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| || |||| ||||||||||    
T  16460937 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgctta 16461028  T

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Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 184
Target Start/End: Original strand, 35759458 - 35759553
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||| ||||||||  ||||| |||||||||||||||||| |||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  35759458 gtgtaacaccccagactactttcatgattgccgactgaccccaaaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 35759553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 52250501 - 52250407
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  52250501 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 52250407  T

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Target: chr1; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 35759915 - 35760003
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgc 178  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||||||    
T  35759915 tgtaacatcccagactgctttcatgattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcgctcgcacgc 35760003  T

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Target: chr1; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 50002576 - 50002652
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  50002576 tttcaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 50002652  T

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Target: chr1; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 184
Target Start/End: Original strand, 46693585 - 46693680
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||| |||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||| |||||    
T  46693585 gtgtaacatcccaaactgctttcaggattgtcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcataccg 46693680  T

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Target: chr1; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 52250838 - 52250744
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| || |||||||||| |||||||    
T  52250838 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccg 52250744  T

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Target: chr1; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 52251175 - 52251081
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| || |||||||||| |||||||    
T  52251175 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccg 52251081  T

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Target: chr1; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 31822970 - 31823064
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||| || |||| ||||||| ||||||||||||||| |||||| |||||||||| | |||||| |||||||||||| ||||||||    
T  31822970 tgtaacatcccagaatgctttctggattgctgactgaccccacaaatcaacacgagtcttttcagcatgttttgtcctcactcgcatgcttaccg 31823064  T

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Target: chr1; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 51372733 - 51372819
Alignment:
Q  98 cccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| |||| ||||| ||||||||| ||||||||||||||||||| |||||||||| ||  |||| |||||||||||||||||||||    
T  51372733 cccatactgctttcaagattgccgattgaccccacaaaccaacacgagtcttttcagcggattttgtcctcactcgcacgcttaccg 51372819  T

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Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 49996531 - 49996613
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactc 172  Q
    ||||||| | ||||||| ||| ||||||||||||||||||||||||| ||||  |||||||||| |||||||| |||||||||    
T  49996531 tgtaacatctcagactgcttttaggattgccgactgaccccacaaactaacaagagtcttttcagcgtgttttgtcctcactc 49996613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 43056941 - 43057010
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||||||||| |||||||||||| ||| ||||||  ||||||| |||||||||||| ||||||||    
T  43056941 attgccgactgaccctacaaaccaacacaagttttttcagtgtgttttgtcctcactcgcatgcttaccg 43057010  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 39582636 - 39582553
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcg 173  Q
    ||||||| |||| |||  ||| || |||||||||||| || ||||||||| || |||||| ||| |||||||| ||||||||||    
T  39582636 tgtaacatcccaaactactttaagcattgccgactgatcctacaaaccaaaacgagtcttctcagcgtgttttgtcctcactcg 39582553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 7547907 - 7547841
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    |||| |||||||||| ||||| |||||| || |||||||  ||||||| |||| |||||||||||||    
T  7547907 attgtcgactgaccctacaaatcaacacgagacttttcagtgtgttttgtccttactcgcacgctta 7547841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 23180995 - 23180939
Alignment:
Q  120 cgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcac 176  Q
    ||||| |||| ||||||||||| ||||||||||| | |||||| || ||||||||||    
T  23180995 cgactaacccgacaaaccaacattagtcttttcagcatgttttgtcgtcactcgcac 23180939  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 28181352 - 28181416
Alignment:
Q  98 cccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgtttt 162  Q
    |||| |||| ||||||||||| | |||| | |||||||||||||| ||||||||||  |||||||    
T  28181352 cccatactgctttcaggattgtcaactgcctccacaaaccaacacgagtcttttcagagtgtttt 28181416  T

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Target: scaffold0389 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 13381 - 13476
Alignment:
Q  87 gagtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  13381 gagtgtaacatcccggactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttac 13476  T

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Target: scaffold0322 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 19261 - 19167
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||||||||    
T  19261 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccg 19167  T

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Target: chr8 (Bit Score: 71; Significance: 7e-32; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 32292236 - 32292142
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  32292236 tgtaacatcccagactgctttcaggattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 32292142  T

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Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 22548400 - 22548492
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    ||||||| |||| |||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  22548400 tgtaacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttac 22548492  T

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Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 22548846 - 22548938
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    ||||||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||||||||||||||    
T  22548846 tgtaacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtctgttcagcgtgttttatcctcactcgcacgcttac 22548938  T

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Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 22026675 - 22026580
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtg-ttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||| |||||||||||||||||||||    
T  22026675 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagtgtgtttttgtcctcactcgcacgcttaccg 22026580  T

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Target: chr8; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 21315961 - 21316055
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||| ||||||| ||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  21315961 tgtaacatcccagactgcttttaggattgtcgattgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 21316055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 34308330 - 34308424
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| ||||||||| || ||||||||    
T  34308330 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccagcacgagtcttttcagcgtgttttgtcctcactcacatgcttaccg 34308424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 34308786 - 34308880
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||| ||||||||| || ||||||||    
T  34308786 tgtaacatcccagactgctttcaggattgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttaccg 34308880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 27022190 - 27022283
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||||    
T  27022190 tgtaacatcccagactgcttttaggattgtcgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttacc 27022283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 12827105 - 12827199
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| || |||||||  |||||||||||| |||||||    
T  12827105 tgtaacatcccagactgctttcaggattgtcgactgaccccacaaaccaacacgagtcttttaaaagtgttttaacctcactcgcacacttaccg 12827199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 17103377 - 17103283
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||   ||| ||||||| ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  17103377 tgtaacatcccagacgacttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 17103283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 25147830 - 25147740
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||| || |||||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||| | ||||||||||||||||    
T  25147830 tgtaacacccaagactgctttcaggattgccgactgaccc-acaaaccaacacgagtcttttcagcgtgttttgtactcactcgcacgctta 25147740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 12100967 - 12100893
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  12100967 tttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttac 12100893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 31283503 - 31283597
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||   |||||  |||| ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  31283503 tgtaacatcccagacgactttcaacattgtcgactgaccccacaaaccaacacgagtcttttcaacgcgttttgtcctcactcgcacgcttaccg 31283597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 41658974 - 41659048
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||    
T  41658974 tttcagcattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttac 41659048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 25148261 - 25148174
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    ||||||| | || |||| ||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||    
T  25148261 tgtaacatctcatactgcttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgacctcactcgcacg 25148174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 10844466 - 10844560
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||   ||| ||||||| |||||||||| |||||| ||||| |||||||||| |||||||| |||||||||||| ||||||||    
T  10844466 tgtaacatcccagacgacttttaggattgtcgactgaccctacaaacaaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaccg 10844560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 8080218 - 8080287
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| |||||| ||| |||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  8080218 attgtcgactggccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 8080287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 9251183 - 9251098
Alignment:
Q  87 gagtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactc 172  Q
    |||||||||| |  |||||| ||||||||||| ||| ||||||||||||||||||| ||| |||||| |||||||| |||||||||    
T  9251183 gagtgtaacatcatagactgctttcaggattgtcgattgaccccacaaaccaacacaagttttttcagcgtgttttgtcctcactc 9251098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 2044322 - 2044259
Alignment:
Q  121 gactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| ||||||||| || |||||||||| |||||||| |||||||||||||||||||||    
T  2044322 gactgaccctacaaaccaatacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 2044259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 32292699 - 32292598
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaa-------ccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    ||||||| ||||||||| ||| |||||||||||||||||| |||||       ||||||| |||||||||| |||||||| ||||||||| |||||||||    
T  32292699 tgtaacatcccagactgcttttaggattgccgactgaccctacaaagtacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttac 32292600  T
Q  183 cg 184  Q
    ||    
T  32292599 cg 32292598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 27926193 - 27926099
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||   ||| || |||| |||||||||| |||||||||||| |||||||||| | |||||| ||||||||||||| |||||||    
T  27926193 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccg 27926099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 30527358 - 30527427
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| ||||||| || ||||| |||||| |||||||||| |||||||| |||||||||||||||||||||    
T  30527358 attgtcgactgatcctacaaatcaacacgagtcttttcagcgtgttttatcctcactcgcacgcttaccg 30527427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 6463438 - 6463489
Alignment:
Q  133 aaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  6463438 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 6463489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 6466533 - 6466468
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcg 173  Q
    |||||| ||||||||||| |||||||||||||||| |||||||| | |||| ||| ||||||||||    
T  6466533 tttcagtattgccgactggccccacaaaccaacacaagtctttttagcgtgctttgtcctcactcg 6466468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 15818892 - 15818953
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcac 176  Q
    ||||||||||| |||||||||||||||| ||||||||||  ||| ||| |||||||||||||    
T  15818892 attgccgactggccccacaaaccaacacaagtcttttcagtgtgctttgtcctcactcgcac 15818953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 9883694 - 9883634
Alignment:
Q  284 ggaaatcatcaattcggcaaagtagaggtatgggggagtctctatttaccttaacggttgt 344  Q
    |||||||||||||||  |||| ||||||||||||||||| |||||||||| ||| ||||||    
T  9883694 ggaaatcatcaattctacaaactagaggtatgggggagtttctatttaccataagggttgt 9883634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 25308037 - 25307969
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||||||||||| |||| ||| |||||| |||||||||| |||  ||| |||||||||||||||||    
T  25308037 aggattgccgactgatcccataaatcaacacgagtcttttcagcgtactttgtcctcactcgcacgctt 25307969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 41913240 - 41913172
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    |||| |||||||||| | |||| ||||| ||| ||||||||||||||| |||||||| |||||||||||    
T  41913240 attgtcgactgaccctataaactaacacgagttttttcaacgtgttttgtcctcacttgcacgcttacc 41913172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 27021840 - 27021903
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttca 153  Q
    ||||||| | || |||| ||||||||||||||||||||  ||||||||||||| ||||||||||    
T  27021840 tgtaacatctcatactgttttcaggattgccgactgacttcacaaaccaacacgagtcttttca 27021903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 12119199 - 12119273
Alignment:
Q  101 agactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgca 175  Q
    ||||||||||||||||  || ||  ||||||||||||||||| ||| ||||||| ||| ||| ||||||||||||    
T  12119199 agactgatttcaggatcaccaacgaaccccacaaaccaacacgagtattttcaatgtgctttgtcctcactcgca 12119273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 315 - 384
Target Start/End: Complemental strand, 17290652 - 17290583
Alignment:
Q  315 gggggagtctctatttaccttaacggttgtatgaacatatgaatagtgaaggatttttatttgttttcat 384  Q
    ||||||||||||||| ||| ||| ||||||||||| |||||  | ||||||| ||||| |||||||||||    
T  17290652 gggggagtctctattcaccataagggttgtatgaatatatgggttgtgaagggtttttgtttgttttcat 17290583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 29117513 - 29117444
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    |||||||||| ||||| ||||| |||||||||||| ||||||||||   || ||| ||||||||||||||    
T  29117513 tttcaggattaccgaccgaccctacaaaccaacacgagtcttttcaggatgatttgtcctcactcgcacg 29117444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 34688090 - 34688044
Alignment:
Q  131 acaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    |||||||||||  ||||||||||||||||||| |||||| |||||||    
T  34688090 acaaaccaacatgagtcttttcaacgtgttttgtcctcattcgcacg 34688044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 15567885 - 15567942
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactc 172  Q
    ||||||||||| ||||||| || |||||  ||||||| |||||||||| |||||||||    
T  15567885 attgccgactggccccacatactaacacgggtctttttaacgtgttttgtcctcactc 15567942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 28453625 - 28453548
Alignment:
Q  98 cccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgca 175  Q
    ||||||||| ||| ||||||| ||||||| |  |||||| ||||| | |||||||| | |||||| ||||||||||||    
T  28453625 cccagactgcttttaggattgtcgactgatcttacaaacaaacacgactcttttcagcatgttttgtcctcactcgca 28453548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 7e-32; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 9125254 - 9125160
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||||    
T  9125254 tgtaacaccccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccg 9125160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 2941606 - 2941702
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| ||||||||| ||||  ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  2941606 agtgtaacatcccagactgctttcgtgattgccgactgaccgcacaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgcttaccg 2941702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 184
Target Start/End: Complemental strand, 28496150 - 28496055
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||  ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  28496150 gtgtaacattccaaactgttttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 28496055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 43233234 - 43233158
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  43233234 tttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 43233158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 184
Target Start/End: Original strand, 7646328 - 7646423
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||| ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  7646328 gtgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 7646423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 2193551 - 2193457
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||| |||||||||||    
T  2193551 tgtaacatctcagactgctttcaggattgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccg 2193457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 28495470 - 28495560
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||||||||||    
T  28495470 tgtaacatcgcagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgggttttgtcctcactcgcacgctt 28495560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 36422546 - 36422452
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  36422546 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 36422452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 42515821 - 42515745
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  42515821 tttcaagattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 42515745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 13122363 - 13122450
Alignment:
Q  98 cccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtg-ttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||| |||||||||||||||||||||    
T  13122363 cccagactgctttcaggattgccgattgaccccacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgcttaccg 13122450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 18833581 - 18833487
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||| | |||||||| |||||| |||||||||| |||||||| |||||||||||||| ||||||    
T  18833581 tgtaacaccccagactgctttcaggattgccgacttatcccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccg 18833487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 2189438 - 2189345
Alignment:
Q  91 gtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||| |||||| |||||| ||| |||||||| ||||||||| |||||||||||    
T  2189438 gtaacatcccagactgctttcaggattgccgactgtccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactcacacgcttaccg 2189345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 13124994 - 13125079
Alignment:
Q  98 cccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtg-ttttctcctcactcgcacgcttac 182  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||| |||||||||||||||||||    
T  13124994 cccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcctttcagcgtgtttttgtcctcactcgcacgcttac 13125079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 6747457 - 6747542
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgca 175  Q
    ||||||| ||||||||| ||| || ||||||||||||||| |||||||||||| |||||||||||| |||||| ||||||||||||    
T  6747457 tgtaacatcccagactgctttaagcattgccgactgaccctacaaaccaacacaagtcttttcaacttgttttgtcctcactcgca 6747542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 184
Target Start/End: Original strand, 6718925 - 6719020
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||| |||||||   ||| |||||||| |||||||||||||||||||||| | ||||||||  ||||||| |||||||||||||||||||||    
T  6718925 gtgtaacatcccagacgacttttaggattgctgactgaccccacaaaccaacacgattcttttcagtgtgttttgtcctcactcgcacgcttaccg 6719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 6747952 - 6748021
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  6747952 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 6748021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 26419103 - 26419168
Alignment:
Q  107 atttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactc 172  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| |||||||||    
T  26419103 atttcaggattgtcgactgaccccacaaaccaacacgagtcttttcaacatgttttgtcctcactc 26419168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 42515362 - 42515293
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||| |||||||||||||    
T  42515362 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcacccgcacgcttaccg 42515293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 34405464 - 34405536
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||||||||||| ||||||  ||||||||| |||||||| |||||||||||||||||||||    
T  34405464 aggattgtcgactgaccccacaaatcaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttaccg 34405536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 7646710 - 7646619
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||| |||||||   ||| ||||||| ||||| ||||||||||||||||| ||||||||||  ||||||| ||||||||||||||||||    
T  7646710 tgtaacatcccagacgacttttaggattgtcgactaaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgctta 7646619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 29038871 - 29038965
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||   ||| || ||||||||||||||| |||||||||||| |||||||||| |||||||| |||||| || |||||||||||    
T  29038871 tgtaacatcccagacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcagtcacacgcttaccg 29038965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 43776380 - 43776321
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtctt 149  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  43776380 tgtaacatcccagactgctttcaggattgccgactaaccccacaaaccaacacgagtctt 43776321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 2611535 - 2611601
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    |||| |||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||||    
T  2611535 attgtcgactgaccctacaaaccaacacgagtcttttcagagtgttttgtcctcactcgcacgctta 2611601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 3312709 - 3312654
Alignment:
Q  274 ttcaaccgtaggaaatcatcaattcggcaaagtagaggtatgggggagtctctatt 329  Q
    |||||||||||||| |||||||||||||||| ||||| || |||||||||||||||    
T  3312709 ttcaaccgtaggaagtcatcaattcggcaaactagagataagggggagtctctatt 3312654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 36422677 - 36422591
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcac 176  Q
    ||||||| |||||| |  ||| || |||| |||||||||||||||| |||||| ||||||||||  ||||||| |||||||||||||    
T  36422677 tgtaacatcccagattacttttagcattgtcgactgaccccacaaatcaacacgagtcttttcagtgtgttttgtcctcactcgcac 36422591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 22529111 - 22529180
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| |||||||||| |||||||||||  |||||||||| ||| |||| ||||||||| |||||||||||    
T  22529111 attgtcgactgaccctacaaaccaacatgagtcttttcagcgtattttgtcctcactcacacgcttaccg 22529180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 29357341 - 29357397
Alignment:
Q  124 tgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||||| |||||||||||| ||||||||||||||| ||| | |||||||||||||||    
T  29357341 tgaccctacaaaccaacacgagtcttttcaacgtgctttgttctcactcgcacgctt 29357397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 3311008 - 3310953
Alignment:
Q  274 ttcaaccgtaggaaatcatcaattcggcaaagtagaggtatgggggagtctctatt 329  Q
    |||||| ||||||| ||||||||||| |||| |||||||| |||||||||||||||    
T  3311008 ttcaacagtaggaagtcatcaattcgacaaactagaggtaagggggagtctctatt 3310953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 43776178 - 43776233
Alignment:
Q  127 ccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    |||||||||||||||| |||||||||| |||||||| || ||| ||||||||||||    
T  43776178 ccccacaaaccaacacgagtcttttcagcgtgttttgtcttcattcgcacgcttac 43776233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 11372719 - 11372657
Alignment:
Q  109 ttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcact 171  Q
    ||||||||||| || |||||| |||||||||||| |||||||||| | |||||| ||||||||    
T  11372719 ttcaggattgctgagtgaccctacaaaccaacacgagtcttttcagcatgttttgtcctcact 11372657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 35474008 - 35474066
Alignment:
Q  126 accccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| |||||||||||| |||| ||||| |||||||| ||||||||||||| |||||||    
T  35474008 accctacaaaccaacacaagtcatttcagcgtgttttgtcctcactcgcacacttaccg 35474066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 18833678 - 18833633
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaa 135  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  18833678 tgtaacaccccagactgctttcaggattgccgactgatcccacaaa 18833633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 3305224 - 3305292
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||| |||||| || ||||| |||||| |||||||||| |||||||| | ||||||||||| ||||||    
T  3305224 attgctgactgatcctacaaatcaacacgagtcttttcagcgtgttttgttctcactcgcactcttacc 3305292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 31406456 - 31406530
Alignment:
Q  108 tttcaggattgccgactgacccc--acaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||||||||| ||||||||| ||  ||||||||||||  ||||||||| | |||||| ||||||||| |||||||    
T  31406456 tttcaggattaccgactgacaccctacaaaccaacacatgtcttttcagcatgttttgtcctcactcacacgctt 31406530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 33316974 - 33316909
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    ||||||| ||||||||| ||||||||||||   ||||||||||||| |||| || | |||||||||    
T  33316974 aggattgtcgactgacctcacaaaccaacatgggtcttttcaacgtattttgtcattactcgcacg 33316909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 13695924 - 13695880
Alignment:
Q  274 ttcaaccgtaggaaatcatcaattcggcaaagtagaggtatgggg 318  Q
    ||||||||||| || |||||||||||||||| |||||||| ||||    
T  13695924 ttcaaccgtagaaattcatcaattcggcaaactagaggtaagggg 13695880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 7e-32; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 17027382 - 17027476
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||||||||    
T  17027382 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccg 17027476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 20850616 - 20850522
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||| |||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  20850616 tgtaacaccccatactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 20850522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 7912173 - 7912079
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||| ||||||||    
T  7912173 tgtaacatcccagactgctttcaggattgtcgactgaccccacaaaccaacacaagtcttttcagcgtgttttgtcctcactcgcatgcttaccg 7912079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 9352349 - 9352263
Alignment:
Q  98 cccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||||    
T  9352349 cccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccg 9352263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 2681071 - 2681163
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||||||||    
T  2681071 tgtaacatcccagacagctttcaggattgccgactgaccccacaaaccaacacgagtcttctcaacgtgttttgtcctcacttgcacgcttac 2681163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 23986168 - 23986258
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||| |||| |||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  23986168 tgtaacatcccatactgctttcagaattgccgactgaccccacaaaccaacacaagtcttttcagcgtgtcttctcctcactcgcacgctt 23986258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 13191364 - 13191455
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||  || |||| ||||||||||||||||||    
T  13191364 tgtaacaccccagactgctttcaagattgccgactgaccccacaaaccaacacgagtcttttcagtgtattttgtcctcactcgcacgctta 13191455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 13492628 - 13492535
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtg-ttttctcctcactcgcacgcttac 182  Q
    ||||||| || |||||| ||||| ||||||||||||||||||||||||||||| |||||||||| |||| |||| |||||||||||||||||||    
T  13492628 tgtaacaccctagactgctttcaagattgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttttttcctcactcgcacgcttac 13492535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 20896536 - 20896633
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtg-ttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| ||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||  ||| |||||||||||||||||| |||||||    
T  20896536 agtgtaacatcccagactgctttcaagattgccggctgaccccacaaaccaacacgagtcttttcagtgtgtttttctcctcactcgcacacttaccg 20896633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 23776735 - 23776643
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||||||||||| | |||||||| |||||||| || ||||||||||| ||||    
T  23776735 tgtaacatcccagactgctttcaggattgccgactgactccacaaaccaacacgaatcttttcagcgtgttttgtcgtcactcgcacgtttac 23776643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 89 - 183
Target Start/End: Complemental strand, 28780406 - 28780312
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    |||||||| ||||||||| |||||| |||| || |||||||||||||||||||| |||||||||||  |||||| ||||||||||||| ||||||    
T  28780406 gtgtaacatcccagactgctttcagcattgtcggctgaccccacaaaccaacacgagtcttttcaaaatgttttatcctcactcgcacacttacc 28780312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 13493087 - 13492990
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtg-ttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| ||||||||| |||||||||||| ||||||||| ||||| |||||| |||||||||| | || |||| |||||||||||||||||||||    
T  13493087 agtgtaacaccccagactgctttcaggattgctgactgaccctacaaatcaacacgagtcttttcagcatgtttttgtcctcactcgcacgcttaccg 13492990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 7912602 - 7912514
Alignment:
Q  93 aacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    |||| |||||| || ||||||||||||||||| ||||||||||||||||  |||||||||| |||||||| |||||||||| |||||||    
T  7912602 aacatcccagattgctttcaggattgccgactaaccccacaaaccaacatgagtcttttcagcgtgttttgtcctcactcgtacgctta 7912514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 2891170 - 2891239
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||||||||| |||||||||||| | |||||||| |||||||| |||||||||||||||||||||    
T  2891170 attgccgactgaccctacaaaccaacacgaatcttttcagcgtgttttgtcctcactcgcacgcttaccg 2891239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 15929434 - 15929344
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||| ||||||||| ||| ||||||||||| |||||||||||| |||||| |||||||| | ||| |||| ||||||||| |||||||    
T  15929434 tgtaacatcccagactgctttaaggattgccgagtgaccccacaaatcaacacaagtctttttagcgtattttgtcctcactcacacgctt 15929344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 17730980 - 17731054
Alignment:
Q  110 tcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| |||||||||| |||||||||||| |||||||| | |||||||| |||||||| ||||||||||||    
T  17730980 tcaggattgtcgactgaccctacaaaccaacacgagtctttttagcgtgttttgtcctcacttgcacgcttaccg 17731054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 2890715 - 2890781
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    |||| |||||||||| |||||||||||| |||||||| | |||||||| ||||||||||||||||||    
T  2890715 attgtcgactgaccctacaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgctta 2890781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 9440708 - 9440794
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcac 176  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||| ||| |||||| ||| |||| || ||||| ||||    
T  9440708 tgtaacatcccagactgctttcaagattgccgactgaccccacaaaccagcacgagttttttcagcgtattttgtcatcacttgcac 9440794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 11062102 - 11062030
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||| |||||| |||| |||||||||||| ||| |||| | |||||||| |||||||||||||||||||||    
T  11062102 aggattaccgactaaccctacaaaccaacacgagtttttttagcgtgttttgtcctcactcgcacgcttaccg 11062030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 20126058 - 20126125
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  20126058 attgtcgacggaccctacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgcttac 20126125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 27334364 - 27334305
Alignment:
Q  114 gattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcg 173  Q
    ||||| |||||||||||||||| |||||| |||||||||| |||||||| ||||||||||    
T  27334364 gattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 27334305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 27395104 - 27395045
Alignment:
Q  114 gattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcg 173  Q
    ||||| |||||||||||||||| |||||| |||||||||| |||||||| ||||||||||    
T  27395104 gattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 27395045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 6331219 - 6331279
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttt 150  Q
    ||||||| | ||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  6331219 tgtaacatctcagactgctttcaagattgccgactgaccctacaaaccaacacgagtcttt 6331279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 17851188 - 17851125
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgc 178  Q
    |||||||| |||||| |||||||||||| ||||||||| || |||||| |||| ||||||||||    
T  17851188 attgccgattgaccctacaaaccaacacgagtcttttcgacttgttttgtcctaactcgcacgc 17851125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 184
Target Start/End: Complemental strand, 21312267 - 21312172
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||| |||||||   ||| || |||| |||||||||| |||||||||||| ||||||||||| ||||||| || |||||  ||| |||||||    
T  21312267 gtgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacaccagtcttttcaatgtgttttgtcttcacttacacacttaccg 21312172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 2720439 - 2720505
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    |||||||||||||||  |||||| |||| |||||| ||| |||||||| | ||||||||||||||||    
T  2720439 attgccgactgaccctgcaaaccgacacgagtcttctcagcgtgttttgttctcactcgcacgctta 2720505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 3652786 - 3652724
Alignment:
Q  122 actgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||| |||||||||||  |||||||||| | | |||| |||||||||||||||||||||    
T  3652786 actgaccctacaaaccaacaagagtcttttcagctttttttgtcctcactcgcacgcttaccg 3652724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 31415965 - 31416026
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    |||||||||||| ||||||||||||||| | |||||||| |||||||| ||||||||| ||||    
T  31415965 attgccgactgatcccacaaaccaacacga-tcttttcagcgtgttttgtcctcactcacacg 31416026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 20732854 - 20732783
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||||||||||| || ||||||||||||||||||| |  |||||||  ||||||| |||||||||||| ||||    
T  20732854 tttcaggattgctgaatgaccccacaaaccaacac-aaacttttcagtgtgttttttcctcactcgcaagctt 20732783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 28583249 - 28583169
Alignment:
Q  100 cagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||| ||||  ||||||||||||||||||||||| ||||  ||||||||||   |||||| ||| ||||| |||||||    
T  28583249 cagactgctttcgagattgccgactgaccccacaaactaacatgagtcttttcagtatgttttgtccccactcacacgctt 28583169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 20735977 - 20735911
Alignment:
Q  103 actgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctca 169  Q
    |||| ||||||||||| | |||||||||||||||| || | |||||||| | |||||||| ||||||    
T  20735977 actgctttcaggattgtcaactgaccccacaaaccgacgcaagtctttttagcgtgttttgtcctca 20735911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 21311810 - 21311716
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||   ||| || |||| ||| |||||| |||||||||||| |||| || || |||||||| || |||||||||| |||||||    
T  21311810 tgtaacatcccagacgactttaagcattgtcgattgaccctacaaaccaacacgagtccttacagcgtgttttgtcttcactcgcacacttaccg 21311716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 3884977 - 3885025
Alignment:
Q  124 tgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactc 172  Q
    |||||| |||||||||||| ||||||| || |||||||| |||||||||    
T  3884977 tgaccctacaaaccaacacaagtctttacatcgtgttttgtcctcactc 3885025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 21557371 - 21557427
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctc 168  Q
    |||||| |||||| |||||  |||||||||| ||||||||||| ||||||| |||||    
T  21557371 aggattaccgacttacccccaaaaccaacacgagtcttttcaatgtgttttttcctc 21557427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 33774915 - 33774947
Alignment:
Q  152 caacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||||| |||||||||||||||||||||    
T  33774915 caacgtgttttttcctcactcgcacgcttaccg 33774947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 184
Target Start/End: Complemental strand, 1516 - 1421
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||| ||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  1516 gtgtaacatcccagactgctttcaggattgtcgactgacgccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 67; Significance: 2e-29; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 162985 - 163079
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||||||||||| |||||||||| |||||||| |||||||||| ||||||||||    
T  162985 tgtaacatcccagactgttttcaggattgccgactggccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgaacgcttaccg 163079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 162531 - 162620
Alignment:
Q  93 aacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtc-ttttcaacgtgttttctcctcactcgcacgctta 181  Q
    |||| |||| |||| ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| ||||||||||||||||||    
T  162531 aacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtctttttcagcgtgttttgtcctcactcgcacgctta 162620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 163368 - 163274
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    ||||||||| |||||||   ||||||||||| |||| ||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  163368 agtgtaacatcccagacgactttcaggattgtcgacagaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttac 163274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 69666 - 69756
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||| |||| |||| ||||||||||||||||||| || |||||||||||| |||||||| | |||| ||| || |||||| |||||||    
T  69666 tgtaacatcccaaactgctttcaggattgccgactgaaccaacaaaccaacacgagtctttttagcgtggtttgtcatcactcacacgctt 69756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 162481 - 162534
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaaca 141  Q
    ||||||||| | |||| || ||| ||||||||||||||||||||||||||||||    
T  162481 agtgtaacatctcagattgcttttaggattgccgactgaccccacaaaccaaca 162534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 2e-29; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 15268018 - 15268112
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  15268018 tgtaacagccgagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 15268112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 24629281 - 24629375
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||||||    
T  24629281 tgtaacatcacagactgctttcaggattgccgactgaccccacaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 24629375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 13266381 - 13266295
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcac 176  Q
    ||||||| |||| |||| ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  13266381 tgtaacatcccatactgctttcaggattgtcgactgaccccacaaaccaacacaagtcttttcaacatgttttctcctcactcgcac 13266295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 35477955 - 35477861
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||| |||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||||| ||||||    
T  35477955 tgtaacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctctctcgcacgtttaccg 35477861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 50398839 - 50398933
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||| ||||| ||||||    
T  50398839 tgtaacatcccagactgctttcaggattgccgactgaccctacaaaccaacacgagtctttccaacgtgttttgtcctcacttgcacgtttaccg 50398933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 4127276 - 4127357
Alignment:
Q  103 actgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||||||||    
T  4127276 actgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccg 4127357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 23350127 - 23350220
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||||| |||||||||    
T  23350127 gtgtaacaccccagactgctttcagaattgccgactgaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcacacgcttac 23350220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 7678467 - 7678561
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||| |||| |||||||||||||||||| |||| |||||||||| |||||||| ||||||||||||| |||||||    
T  7678467 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaacctacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 7678561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 49998931 - 49998837
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||| |||| |||||| ||||||||||| |||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  49998931 tgtaacaccccaaactgctttcagaattgccgactgtccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 49998837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 35871904 - 35871828
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||| ||||||    
T  35871904 tttcaggattgccgactgatcccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccg 35871828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 14571545 - 14571615
Alignment:
Q  102 gactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactc 172  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  14571545 gactgctttcaggattcccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactc 14571615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 14572007 - 14572089
Alignment:
Q  98 cccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| ||||||||| |||||||    
T  14572007 cccatactgctttcaggattgccgactgaccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctt 14572089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 50398383 - 50398477
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| | ||||||| |||||||||||||||||||||| |||||||||||| ||||||| ||  || |||| |||||||||||||||||||||    
T  50398383 tgtaacatctcagactgctttcaggattgccgactgaccctacaaaccaacacgagtctttccagtgtattttgtcctcactcgcacgcttaccg 50398477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 1645619 - 1645686
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  1645619 attgccaactgaccctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttac 1645686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 23943087 - 23943181
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||   ||| || |||| |||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  23943087 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 23943181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 7381537 - 7381468
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||||||||| ||||||||||||  ||||||||| |||||||| |||||||||||||||||||||    
T  7381537 attgccgactgaccctacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttaccg 7381468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 3169476 - 3169408
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    |||||| |||||||| |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  3169476 attgccaactgaccctacaaaccaacacgagtattttcaacgtgttttgtcctcactcgcacgcttacc 3169408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 4127739 - 4127828
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||| ||||||||||     |||||||||||||| |||||||||| |||||||| ||||||||| |||||||||||    
T  4127739 tgtaacatcccagactgctttcaagattgccgac-----ccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccg 4127828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 8467690 - 8467748
Alignment:
Q  122 actgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  8467690 actgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgctt 8467748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 4414257 - 4414325
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||||||||||| |||||||||||| ||||||||||  ||||||| |||| |||||||||||||||    
T  4414257 attgccgactgaccctacaaaccaacacgagtcttttcagtgtgttttgtcctgactcgcacgcttacc 4414325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 44470718 - 44470814
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| |||||||   ||| || ||||  ||||||||| |||||||||||| ||||||| || |||||||| |||||||||||||||||||||    
T  44470718 agtgtaacaccccagacgactttaagaattgttgactgaccctacaaaccaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccg 44470814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 50399399 - 50399336
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttca 153  Q
    ||||||| | ||||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  50399399 tgtaacatcgcagactgctttcaggattgccgactgaccctacaaaccaacacgagtcttttca 50399336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 5810107 - 5810039
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||||||||| |||||||||| |||||  |||||||||| |||||||| ||||||||| |||||||    
T  5810107 aggattgccgactaaccccacaaatcaacatgagtcttttcagcgtgttttatcctcactcacacgctt 5810039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 17628788 - 17628716
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||||||||||||||||||| ||||| |||||||| ||||||| ||  ||||||| ||||||||| |||||||    
T  17628788 tttcaggattgccgactgactccacataccaacacaagtctttccagtgtgttttgtcctcactcacacgctt 17628716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 27578320 - 27578392
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||||||||||  |||||| ||||||||||| ||| |||||||||  |||||||| |||||||||||||||||    
T  27578320 tttcaggattgttgactgatcccacaaaccatcacgagtcttttctgcgtgttttgtcctcactcgcacgctt 27578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 31816981 - 31817073
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||||| |||| |||  | ||||||||| ||| || |||||||||||| ||| |||||||||||| |||||| |||||||||| ||||||    
T  31816981 agtgtaacatcccatactactatcaggattgtcgattggccccacaaaccagcacgagtcttttcaacatgttttgtcctcactcgtacgctt 31817073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 31817707 - 31817792
Alignment:
Q  99 ccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccgc 185  Q
    |||||||| |||||||||||| |||||| ||| ||||||||||| ||||  |||||| || ||| ||||||||||||||||| ||||    
T  31817707 ccagactgctttcaggattgctgactgatccctcaaaccaacacgagtc-attcaacatgatttgtcctcactcgcacgctttccgc 31817792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 27578134 - 27578218
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    ||||||| ||||||||  |||||||||| ||||||   || |||| ||||||| |||||||||| |||||||| ||||||||||||||    
T  27578134 tgtaacatcccagactcctttcaggattaccgact---cctacaacccaacacgagtcttttcagcgtgttttgtcctcactcgcacg 27578218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 44471195 - 44471264
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| |||||||||| |||||||||||| ||||||| || | |||||| ||||||||||| |||||||||    
T  44471195 attgtcgactgaccctacaaaccaacacgagtctttccagcatgttttgtcctcactcgcccgcttaccg 44471264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 53854717 - 53854786
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||||| |||| ||||| |||||| |||||||||||||| |||| || ||||||||||| ||||||    
T  53854717 attgccgactaaccctacaaatcaacacgagtcttttcaacgtattttgtcatcactcgcacgtttaccg 53854786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 21067546 - 21067483
Alignment:
Q  121 gactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| |||||| ||||| ||||||||||  ||||||| ||| |||||||||||||||||    
T  21067546 gactgacccaacaaactaacacgagtcttttcagtgtgttttgtccccactcgcacgcttaccg 21067483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 23942675 - 23942725
Alignment:
Q  131 acaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||||||||  ||| |||||||||||||| ||||||||||||||||||    
T  23942675 acaaaccaacacgggtcctttcaacgtgttttgtcctcactcgcacgctta 23942725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 53996007 - 53996053
Alignment:
Q  122 actgaccccacaaaccaacactagtcttttcaacgtgttttctcctc 168  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||||    
T  53996007 actgaccctacaaaccaacacgagtcttttcaacgtgttttgtcctc 53996053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 10668426 - 10668381
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaa 135  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  10668426 tgtaacaccccagactgctttcaggattgcccactgaccccacaaa 10668381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 10668932 - 10668887
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaa 135  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  10668932 tgtaacaccccagactgctttcaggattgccaactgaccccacaaa 10668887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 10882571 - 10882526
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaa 135  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  10882571 tgtaacaccccagactgctttcaggattgcccactgaccccacaaa 10882526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 40607201 - 40607132
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||||||  ||||||| |||||| ||| |||||| ||| |||| |||||||||| ||||||||||    
T  40607201 attgccgactgattccacaaatcaacacgagttttttcagcgtattttgtcctcactcgaacgcttaccg 40607132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 23976094 - 23976142
Alignment:
Q  121 gactgaccccacaaaccaacactagtcttttcaacgtgttttctcctca 169  Q
    ||||||||||| ||||||||| ||||||||||| |||||||| ||||||    
T  23976094 gactgaccccataaaccaacattagtcttttcagcgtgttttttcctca 23976142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 14645820 - 14645765
Alignment:
Q  274 ttcaaccgtaggaaatcatcaattcggcaaagtagaggtatgggggagtctctatt 329  Q
    |||||| || |||| |||||||||||| ||| |||||||| |||||||||||||||    
T  14645820 ttcaactgtgggaagtcatcaattcggaaaactagaggtaagggggagtctctatt 14645765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 51331128 - 51331218
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||| || |||||  ||| |||||||||||||||||| |||||| || || |||| |||||  ||||||| |||||| |||||||||||    
T  51331128 tgtaacatcctagactacttttaggattgccgactgaccctacaaactaatacgagtc-tttcagtgtgttttgtcctcattcgcacgctta 51331218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 9423748 - 9423794
Alignment:
Q  135 accaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    |||||||| |||||||||| |||||||| |||||||||||| |||||    
T  9423748 accaacacgagtcttttcagcgtgttttgtcctcactcgcatgctta 9423794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 1464439 - 1464355
Alignment:
Q  92 taacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacg 177  Q
    ||||| ||||||||| ||| ||||||  |||| ||||||||||| |||||| ||| |||||| |||||| | |||| |||||||||    
T  1464439 taacatcccagactgcttttaggattatcgaccgaccccacaaatcaacacgagt-ttttcagcgtgttgtgtcctaactcgcacg 1464355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 21068001 - 21067932
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||||| | || |||||||||||| | | ||||||  ||||||| |||||||||||||| ||||||    
T  21068001 attgccgactaagcctacaaaccaacacgaattttttcagtgtgttttgtcctcactcgcacgtttaccg 21067932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 23091367 - 23091436
Alignment:
Q  103 actgatttcaggattgccgactga-ccccacaaaccaacactagtcttttcaacgtgttttctcctcact 171  Q
    |||| ||||||| ||||||||||| ||||| |||| ||||||||| |||| | |||||||| ||||||||    
T  23091367 actgctttcagggttgccgactgacccccataaactaacactagtttttttagcgtgttttatcctcact 23091436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 21220198 - 21220262
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttca 153  Q
    |||||||| | || |||| ||||| |||||||||||||||||| ||| || ||| ||||||||||    
T  21220198 gtgtaacacctcaaactgctttcaagattgccgactgaccccagaaatcagcacaagtcttttca 21220262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 27578788 - 27578844
Alignment:
Q  124 tgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||||| ||||| |||||| |||||||||| | || ||| |||||||||||||||||    
T  27578788 tgaccctacaaatcaacacaagtcttttcagcatgatttgtcctcactcgcacgctt 27578844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 39102828 - 39102868
Alignment:
Q  111 caggattgccgactgaccccacaaaccaacactagtctttt 151  Q
    ||||||||| |||||| ||||||||||||||||| ||||||    
T  39102828 caggattgctgactgagcccacaaaccaacactaatctttt 39102868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 14820449 - 14820355
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| ||| ||||||||    
T  14820449 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccg 14820355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 14814244 - 14814150
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||| |||||||||| ||||||||||||||||| |||||||||| |||||||| || ||||||||||||||||||    
T  14814244 tgtaacatcccagactgctttcagtattgccgactaaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacgcttaccg 14814150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 32227072 - 32227166
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||    
T  32227072 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttaccg 32227166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 28562043 - 28561946
Alignment:
Q  87 gagtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||||| | || |||| ||||| |||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  28562043 gagtgtaacatctcatactgctttcaagattaccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 28561946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 50348043 - 50347950
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||||| ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||    
T  50348043 agtgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacactta 50347950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 8067575 - 8067484
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||| ||||||||| ||| ||||||||||| ||||| ||||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  8067575 tgtaacatcccagactgcttttaggattgccgattgacctcacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgctta 8067484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 13150405 - 13150499
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||| |||| |||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  13150405 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 13150499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 39653459 - 39653365
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||| || |||| ||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  39653459 tgtaacatcccagactgcttttagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 39653365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 11179887 - 11179979
Alignment:
Q  92 taacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||| ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| ||||||||| ||| |||||||    
T  11179887 taacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacacttaccg 11179979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 16811220 - 16811128
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    ||||||| |||||| || |||||||||||||||| |||||||||||||||||| | |||||||| ||| |||| |||||||||||||||||||    
T  16811220 tgtaacatcccagattgctttcaggattgccgaccgaccccacaaaccaacacgaatcttttcagcgtattttgtcctcactcgcacgcttac 16811128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 16811674 - 16811585
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  | ||||| |||||||||||| |||||    
T  16811674 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttca--gcgttttgtcctcactcgcatgctta 16811585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 27187188 - 27187272
Alignment:
Q  98 cccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtg-ttttctcctcactcgcacgctta 181  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||    
T  27187188 cccagactgttttcagaattgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgctta 27187272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 13149953 - 13150044
Alignment:
Q  93 aacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| |||||||| |||| |||||||    
T  13149953 aacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcacacttaccg 13150044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 32227795 - 32227704
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||||| ||||||||| |||||| |||| |||||||||| |||||||||||| ||||||||||| ||||||| ||||||||||||| ||||    
T  32227795 tgtaacatcccagactgctttcagcattgtcgactgaccctacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacactta 32227704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 32386595 - 32386678
Alignment:
Q  100 cagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| |||||||| | |||||||| |||||||||| |||||||||    
T  32386595 cagactgctttcaagattgccgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcggacgcttacc 32386678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 31284127 - 31284217
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    ||||||| |||||| || ||||| ||||||||||||||||||||||||||||| |||||||||  |||||||| ||| |||||||||||||    
T  31284127 tgtaacatcccagattgctttcatgattgccgactgaccccacaaaccaacacgagtcttttcggcgtgttttgtccccactcgcacgctt 31284217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 41473836 - 41473744
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    ||||||| | || |||| ||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||    
T  41473836 tgtaacatctcatactgctttcacgattggcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttac 41473744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 25248407 - 25248312
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtctttt-caacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| ||| ||||||| ||||| ||| |||||| |||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  25248407 tgtaacatcccagactgcttttaggattgtcgactaacctcacaaatcaacacgagtctttttcaacgtgttttgtcctcactcgcacgcttaccg 25248312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 25230124 - 25230193
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  25230124 attgtcgactgaccctacaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccg 25230193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 25237711 - 25237780
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  25237711 attgtcgactgaccctacaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccg 25237780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 4067236 - 4067304
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||| |||||||||||    
T  4067236 attgccgactgaccctacaaaccaacactggtcttttcagcgtgttttgtcctcacttgcacgcttacc 4067304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 2911338 - 2911285
Alignment:
Q  131 acaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  2911338 acaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccg 2911285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 37045336 - 37045236
Alignment:
Q  81 aaaccagagtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||||| | ||||||| |||||||   ||| || |||| |||||||||| |||||||||||| |||||||||| |||||||| |||||||||||| ||||    
T  37045336 aaaccaaactgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgctt 37045237  T
Q  181 a 181  Q
    |    
T  37045236 a 37045236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 25239003 - 25239070
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    |||| |||||||||| |||||||||||| |||||||||| |||||||| ||||||||| |||||||||    
T  25239003 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttac 25239070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 381
Target Start/End: Original strand, 18534443 - 18534550
Alignment:
Q  274 ttcaaccgtaggaaatcatcaattcggcaaag-tagaggtatgggggagtctctatttaccttaacggttgtatgaacatatgaatagtgaaggattttt 372  Q
    ||||||| ||||||||||||||||  |||||  |||||||| ||||||||||||||| ||| ||| | |||||||||||||||  ||||||||| |||||    
T  18534443 ttcaaccataggaaatcatcaatttcgcaaaactagaggtaagggggagtctctattcaccataaggattgtatgaacatatg-gtagtgaagggttttt 18534541  T
Q  373 atttgtttt 381  Q
     ||| ||||    
T  18534542 ttttttttt 18534550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 25238560 - 25238628
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||||| ||||  |||||||||||| |||||||||| |||||||| |||||||||||| |||||||    
T  25238560 attgccgaccgaccatacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttacc 25238628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 353
Target Start/End: Complemental strand, 3593138 - 3593063
Alignment:
Q  279 ccgtaggaaatcatcaattcggcaaagtagaggtatgggg-gagtctctatttaccttaacggttgtatgaacata 353  Q
    |||||||||||||||||||||||||| |||||||| |||| ||||||||||| | | ||| |||||||||| ||||    
T  3593138 ccgtaggaaatcatcaattcggcaaactagaggtaaggggagagtctctattcatcataagggttgtatgatcata 3593063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 285 - 366
Target Start/End: Original strand, 18705557 - 18705638
Alignment:
Q  285 gaaatcatcaatt-cggcaaagtagaggtatgggggagtctctatttaccttaacggttgtatgaacatatgaatagtgaagg 366  Q
    ||||||||||||| ||  ||| |||||||||||||||||||||||||||| ||| ||||||||||||||| |  |||||||||    
T  18705557 gaaatcatcaatttcgtaaaactagaggtatgggggagtctctatttaccataa-ggttgtatgaacataagggtagtgaagg 18705638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 20884993 - 20885059
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    ||||| ||||||||| |||||||||||| |||||||||| |||||||| |||| ||| |||||||||    
T  20884993 attgcagactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctaacttgcacgctta 20885059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 53150683 - 53150753
Alignment:
Q  110 tcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||||||||  |||||||||||||||| ||||  |||||||||||| |||||| ||||||||||| |||||    
T  53150683 tcaggattgttgactgaccccacaaactaacatgagtcttttcaacatgttttgtcctcactcgcccgctt 53150753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 7477461 - 7477396
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||| |||||||||||||| |||||||  ||||||||||||||| ||| | |||||||||||||||    
T  7477461 attgtcgactgaccccacataccaacatgagtcttttcaacgtgctttgttctcactcgcacgctt 7477396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 7494151 - 7494086
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||| |||||||||||||| |||||||  ||||||||||||||| ||| | |||||||||||||||    
T  7494151 attgtcgactgaccccacataccaacatgagtcttttcaacgtgctttgttctcactcgcacgctt 7494086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 25230587 - 25230650
Alignment:
Q  121 gactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| |||||||||||| ||||||| || ||||||||   |||||||||||||||||||    
T  25230587 gactgaccctacaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccg 25230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 25238174 - 25238237
Alignment:
Q  121 gactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| |||||||||||| ||||||| || ||||||||   |||||||||||||||||||    
T  25238174 gactgaccctacaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccg 25238237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 30529956 - 30529889
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttac 182  Q
    |||||||||| ||||  ||||||||||| |||||||| | |||||||| |||||||||||| ||||||    
T  30529956 attgccgactaaccctgcaaaccaacacaagtctttttagcgtgttttgtcctcactcgcatgcttac 30529889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 25230973 - 25231030
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactc 172  Q
    ||||||||| ||||  |||||||||||| |||||||||| |||||||| |||||||||    
T  25230973 attgccgaccgaccatacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 25231030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 18318932 - 18318860
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||| |||||||||| || ||| |||||||||| | | |||||||| |||||||| | |||||||||||||||    
T  18318932 tttctggattgccgattgtcccaacaaaccaacccgaatcttttcagcgtgttttgttctcactcgcacgctt 18318860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 376
Target Start/End: Original strand, 24177926 - 24177987
Alignment:
Q  315 gggggagtctctatttaccttaacggttgtatgaacatatgaatagtgaaggatttttattt 376  Q
    ||||||||||||||| ||| ||| | || ||||||||||||  ||||||||| |||||||||    
T  24177926 gggggagtctctattcaccataaggattctatgaacatatgggtagtgaagggtttttattt 24177987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 3900077 - 3900005
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||||| ||||| ||||||||||||| | |||||| |||||||||| | |||||| |||  |||| |||||||    
T  3900077 tttcagaattgctgactgaccccacagatcaacacgagtcttttcaccttgttttgtccatactcacacgctt 3900005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 30993302 - 30993342
Alignment:
Q  315 gggggagtctctatttaccttaacggttgtatgaacatatg 355  Q
    ||||||||||||||| ||| ||| |||||||||||||||||    
T  30993302 gggggagtctctattcaccataagggttgtatgaacatatg 30993342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 107312 - 107408
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| ||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||||    
T  107312 agtgtaacatcccagactgctttcagaatagccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccg 107408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 2393 - 2297
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| | ||||||||| ||| ||||||| ||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  2393 agtgtaaaatcccagactgcttttaggattgtcgactgatcctacaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgcttaccg 2297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 3037 - 2943
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| || |||||| |||||| ||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  3037 tgtaacatccgagactgctttcagcattgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 2943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 2061 - 2155
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||   ||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  2061 tgtaacatcccagacaacttttaggattgtcgactgaccccacaaaccaacacgagtcttttcaatgtgttttgtcctcactcgcacgcttaccg 2155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 154597 - 154503
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||| |||||| |||| |||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  154597 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 154503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 155049 - 154958
Alignment:
Q  93 aacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| |||||||| |||| |||||||    
T  155049 aacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactagcacacttaccg 154958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 90 - 183
Target Start/End: Complemental strand, 106015 - 105922
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||| | ||||||| |||||| ||||||||||||||| | |||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  106015 tgtaacatctcagactgctttcagaattgccgactgaccctataaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacc 105922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 90 - 183
Target Start/End: Complemental strand, 10594 - 10501
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttacc 183  Q
    ||||||| ||| ||||  |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  10594 tgtaacatccccgactactttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacc 10501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 1550 - 1646
Alignment:
Q  88 agtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||| |||||||| | |||||||| ||||||||| || ||||||||    
T  1550 agtgtaacatcccagactgctttcaggattatcgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcacatgcttaccg 1646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 89 - 184
Target Start/End: Original strand, 14552 - 14647
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||||||| ||||||||| |||||| |||| || |||||||||||||||||||| |||||||||| | |||||| ||||||||||||| |||||||    
T  14552 gtgtaacatcccagactgctttcagcattgtcggctgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccg 14647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 245369 - 245287
Alignment:
Q  98 cccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctt 180  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| ||||||||| |||||||    
T  245369 cccatactgctttcaggattgccgactgaccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctt 245287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 245831 - 245761
Alignment:
Q  102 gactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactc 172  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  245831 gactgctttcaggattcccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactc 245761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 171470 - 171525
Alignment:
Q  274 ttcaaccgtaggaaatcatcaattcggcaaagtagaggtatgggggagtctctatt 329  Q
    |||||| || |||| |||||||||||| ||| |||||||| |||||||||||||||    
T  171470 ttcaactgtgggaagtcatcaattcggaaaactagaggtaagggggagtctctatt 171525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 1924 - 1996
Alignment:
Q  112 aggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| ||||||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||||    
T  1924 aggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtattttgtcctcactcgcacgcttaccg 1996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 606 - 514
Alignment:
Q  89 gtgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgctta 181  Q
    |||||||| || |||||  ||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| || |||||    
T  606 gtgtaacatccgagactacttttaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgctta 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 354
Target Start/End: Complemental strand, 1911 - 1834
Alignment:
Q  278 accgtaggaaatcatcaattcggcaaagtagaggtatg-ggggagtctctatttaccttaacggttgtatgaacatat 354  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||| ||| ||||||||||| ||||    
T  1911 accgtaggaaatcatcaattctgcaaactagaggtatggggggagtctctatttaccataagggttgtatgaatatat 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 5315 - 5221
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||| |||||||   ||| || |||| |||||||||| |||||||||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  5315 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 5221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 4830 - 4761
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| |||||||||| |||||||||||| |||||||||| |||||||| ||||||||||||| |||||||    
T  4830 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccg 4761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 5393 - 5323
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtg-ttttctcctcactcgcacgcttaccg 184  Q
    |||| ||||| |||| |||||||||||| |||||||||| |||| |||| ||||||||||||| |||||||    
T  5393 attgtcgacttaccctacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacacttaccg 5323  T

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Target: scaffold0047 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 17474 - 17543
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    ||||||||||||||| |  ||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  17474 attgccgactgaccctatgaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg 17543  T

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Target: scaffold0047; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 18011 - 18080
Alignment:
Q  115 attgccgactgaccccacaaaccaacactagtcttttcaacgtgttttctcctcactcgcacgcttaccg 184  Q
    |||| ||| |||||| ||||| |||||| |||||||||| |||||| | |||||||||||||| ||||||    
T  18011 attgtcgattgaccctacaaatcaacacgagtcttttcagcgtgttgtgtcctcactcgcacgtttaccg 18080  T

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Target: scaffold0094 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 48325 - 48227
Alignment:
Q  274 ttcaaccgtaggaaatcatcaattcggcaaagtagaggt-atgggggagtctctatttaccttaacggttgtatgaacatatgaatagtgaaggatttt 371  Q
    |||||||||||||| |||||||||||| ||| ||||||| | ||||||||||||||| ||| ||| | |||||||| ||||||  ||||||||| ||||    
T  48325 ttcaaccgtaggaattcatcaattcggaaaactagaggtaaggggggagtctctattcaccataaggattgtatgatcatatgggtagtgaaggctttt 48227  T

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Target: scaffold0065 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 62976 - 63030
Alignment:
Q  108 tttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgtttt 162  Q
    |||||||||||||||||||||||||||||||| || |||||||||| ||||||||    
T  62976 tttcaggattgccgactgaccccacaaaccaatacgagtcttttcagcgtgtttt 63030  T

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Target: scaffold0065; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 67214 - 67275
Alignment:
Q  90 tgtaacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtctttt 151  Q
    ||||||| | ||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||    
T  67214 tgtaacatcacagactgctttcaggattgccgattgaccccacaaaccaacacaagtgtttt 67275  T

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Target: scaffold0442 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 68 - 1
Alignment:
Q  92 taacaacccagactgatttcaggattgccgactgaccccacaaaccaacactagtcttttcaacgtgt 159  Q
    ||||| |||| |||| ||| ||||||||| |||||||| |||||||||||| |||||||||| |||||    
T  68 taacatcccaaactgcttttaggattgcctactgaccctacaaaccaacacgagtcttttcagcgtgt 1  T

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Target: scaffold0088 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 364
Target Start/End: Original strand, 35516 - 35604
Alignment:
Q  278 accgtaggaaatcatcaa-ttcggcaaagtagaggtatgggg-gagtctctatttaccttaacggttgtatgaacatatgaatagtgaa 364  Q
    |||||||||| ||||||| |||| |||| |||||||| |||| ||||||||||| | | ||| |||||||| ||||||||  |||||||    
T  35516 accgtaggaactcatcaaattcgacaaactagaggtaaggggggagtctctattcagcgtaagggttgtatcaacatatgggtagtgaa 35604  T

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