View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11008_high_12 (Length: 454)

Name: NF11008_high_12
Description: NF11008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11008_high_12
NF11008_high_12
[»] chr6 (11 HSPs)
chr6 (19-334)||(18781685-18782002)
chr6 (43-319)||(20419557-20419833)
chr6 (43-334)||(30518189-30518480)
chr6 (43-319)||(20414824-20415100)
chr6 (43-334)||(18553296-18553586)
chr6 (108-334)||(20417455-20417682)
chr6 (37-171)||(20417683-20417817)
chr6 (64-265)||(6230608-6230808)
chr6 (196-260)||(21299377-21299442)
chr6 (132-192)||(2147847-2147908)
chr6 (199-240)||(12639527-12639568)
[»] chr1 (10 HSPs)
chr1 (19-334)||(20127003-20127318)
chr1 (37-334)||(22062047-22062345)
chr1 (75-334)||(6473763-6474022)
chr1 (80-334)||(20190330-20190588)
chr1 (83-334)||(24156956-24157210)
chr1 (351-419)||(49032721-49032789)
chr1 (351-439)||(28443953-28444041)
chr1 (196-240)||(37260438-37260482)
chr1 (129-192)||(40554445-40554509)
chr1 (134-192)||(48463137-48463195)
[»] scaffold0010 (1 HSPs)
scaffold0010 (19-334)||(136689-137004)
[»] chr8 (6 HSPs)
chr8 (43-334)||(20730831-20731122)
chr8 (351-439)||(9385222-9385310)
chr8 (197-266)||(18446237-18446306)
chr8 (196-260)||(16417535-16417600)
chr8 (196-260)||(18774284-18774349)
chr8 (132-192)||(23015809-23015870)
[»] chr7 (10 HSPs)
chr7 (80-334)||(9595340-9595594)
chr7 (80-334)||(9646303-9646557)
chr7 (43-335)||(32706295-32706589)
chr7 (41-192)||(5247437-5247589)
chr7 (351-426)||(8524197-8524272)
chr7 (196-260)||(16157057-16157122)
chr7 (133-228)||(14575569-14575663)
chr7 (133-228)||(14578845-14578939)
chr7 (196-260)||(21368624-21368689)
chr7 (196-240)||(22707689-22707733)
[»] chr4 (18 HSPs)
chr4 (78-334)||(15019186-15019442)
chr4 (78-334)||(15017546-15017802)
chr4 (83-334)||(39488053-39488304)
chr4 (37-334)||(17266600-17266902)
chr4 (37-334)||(34098671-34098967)
chr4 (80-335)||(9167179-9167434)
chr4 (37-335)||(17780664-17780970)
chr4 (59-228)||(23090830-23090998)
chr4 (251-334)||(20264941-20265024)
chr4 (373-439)||(40451975-40452041)
chr4 (373-419)||(633591-633637)
chr4 (351-406)||(40452035-40452090)
chr4 (110-176)||(19460135-19460201)
chr4 (351-406)||(633542-633597)
chr4 (126-192)||(19180483-19180550)
chr4 (196-237)||(11475673-11475714)
chr4 (132-192)||(19459912-19459973)
chr4 (132-191)||(11099045-11099105)
[»] chr5 (9 HSPs)
chr5 (79-334)||(244345-244599)
chr5 (43-334)||(4568208-4568498)
chr5 (80-334)||(29950111-29950365)
chr5 (80-334)||(29951749-29952003)
chr5 (132-274)||(11126379-11126518)
chr5 (373-431)||(6703401-6703459)
chr5 (126-285)||(34597760-34597919)
chr5 (351-406)||(6703453-6703508)
chr5 (196-260)||(22821276-22821341)
[»] chr2 (9 HSPs)
chr2 (43-334)||(6050127-6050419)
chr2 (78-331)||(15409791-15410043)
chr2 (43-334)||(33809331-33809625)
chr2 (216-330)||(23732354-23732468)
chr2 (351-439)||(940588-940676)
chr2 (196-260)||(44794775-44794840)
chr2 (129-192)||(44792884-44792948)
chr2 (132-192)||(24808197-24808258)
chr2 (153-192)||(31939075-31939114)
[»] scaffold0076 (1 HSPs)
scaffold0076 (37-334)||(54722-55019)
[»] scaffold0017 (1 HSPs)
scaffold0017 (43-334)||(4497-4788)
[»] chr3 (17 HSPs)
chr3 (76-334)||(5553462-5553720)
chr3 (45-305)||(17236774-17237030)
chr3 (111-334)||(22271157-22271383)
chr3 (206-331)||(23433138-23433262)
chr3 (19-113)||(16345391-16345487)
chr3 (373-433)||(21563910-21563970)
chr3 (132-266)||(16019425-16019556)
chr3 (351-426)||(39687753-39687828)
chr3 (196-260)||(13179870-13179935)
chr3 (196-260)||(13184528-13184593)
chr3 (133-228)||(13956976-13957070)
chr3 (133-228)||(15381933-15382027)
chr3 (133-228)||(15387669-15387763)
chr3 (199-260)||(33757949-33758011)
chr3 (132-192)||(16347198-16347259)
chr3 (132-192)||(47418036-47418097)
chr3 (133-228)||(13962709-13962803)
[»] scaffold0083 (1 HSPs)
scaffold0083 (37-334)||(33166-33465)
[»] scaffold0075 (1 HSPs)
scaffold0075 (19-274)||(25724-25980)
[»] scaffold0585 (1 HSPs)
scaffold0585 (44-334)||(776-1065)
[»] scaffold0146 (3 HSPs)
scaffold0146 (45-334)||(6576-6863)
scaffold0146 (45-332)||(9471-9756)
scaffold0146 (45-332)||(17138-17423)
[»] scaffold0096 (1 HSPs)
scaffold0096 (122-334)||(22519-22730)
[»] scaffold0269 (1 HSPs)
scaffold0269 (80-150)||(1490-1560)
[»] scaffold0359 (1 HSPs)
scaffold0359 (196-260)||(8747-8812)
[»] scaffold0003 (1 HSPs)
scaffold0003 (196-260)||(288993-289058)
[»] scaffold0671 (1 HSPs)
scaffold0671 (196-240)||(2155-2199)
[»] scaffold0065 (1 HSPs)
scaffold0065 (196-240)||(33780-33824)
[»] scaffold0254 (1 HSPs)
scaffold0254 (132-192)||(24311-24372)
[»] scaffold0180 (1 HSPs)
scaffold0180 (132-192)||(10850-10911)
[»] scaffold0139 (1 HSPs)
scaffold0139 (132-192)||(6465-6526)
[»] scaffold0018 (1 HSPs)
scaffold0018 (132-192)||(141-202)
[»] scaffold0002 (1 HSPs)
scaffold0002 (132-192)||(374790-374851)
[»] scaffold0025 (1 HSPs)
scaffold0025 (132-192)||(55425-55486)
[»] scaffold0013 (1 HSPs)
scaffold0013 (132-192)||(241614-241675)


Alignment Details
Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 19 - 334
Target Start/End: Original strand, 18781685 - 18782002
Alignment:
Q  19 ccattgagatacttgcaacaagtgctctataaattgtaagtttctctatgaaatagaaaag-gttgaattttatagaattttacacatatgtgtattgag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  18781685 ccattgagatacttgcaacaagtgctctataaattgtaagtttctctatgaaatagaaaaaagttgaatattatagaattttacacatatgtgtattgag 18781784  T
Q  118 agctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttctt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18781785 agctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttctt 18781884  T
Q  218 ggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattca-taatttgcttccgacg 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  18781885 ggattagaaagtgtggcgtccctgtctatccattccatttcttcatcttttagtcttttcaccatttccaccaacaatattcattaatttgcttccgacg 18781984  T
Q  317 gctccgtggcactcatca 334  Q
    |||| |||||||||||||    
T  18781985 gctctgtggcactcatca 18782002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 43 - 319
Target Start/End: Complemental strand, 20419833 - 20419557
Alignment:
Q  43 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 142  Q
    ||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  20419833 ctctataaattgtaagtttctctatgaaataaagggagttgaattttatagaattttacacatatgtgtattgagagtcttgtctcttgtggttctggat 20419734  T
Q  143 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20419733 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 20419634  T
Q  243 ctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggct 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20419633 ctatccattccatttcttcatcttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggct 20419557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 43 - 334
Target Start/End: Complemental strand, 30518480 - 30518189
Alignment:
Q  43 ctctataaattgtaagtttctctatgaaatagaaaa-ggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctgga 141  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30518480 ctctataaattgtaactttctctatgaaataaaaaaaggttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctgga 30518381  T
Q  142 ttgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctg 241  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30518380 ttgaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctg 30518281  T
Q  242 tctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    |||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30518280 tctatccatttcatttcttcat-ttttagtcttttcaccattttcaccaacaatattcataatttgcttccgacggcttcgtggcactcatca 30518189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 43 - 319
Target Start/End: Complemental strand, 20415100 - 20414824
Alignment:
Q  43 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 142  Q
    ||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20415100 ctctataaattgtaagtttctctatgaaataaagggagttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggttctggat 20415001  T
Q  143 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20415000 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttagattagaaagtgtggcgtccctgt 20414901  T
Q  243 ctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggct 319  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20414900 ctatccattcaatttcttcatcttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggct 20414824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 43 - 334
Target Start/End: Original strand, 18553296 - 18553586
Alignment:
Q  43 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 142  Q
    ||||||||||||||| |||||||||||||||  | | ||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  18553296 ctctataaattgtaactttctctatgaaataagataagttgaattttatagaattttacacat--gtgtattgagagccttgtctcttgtggttctggat 18553393  T
Q  143 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18553394 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 18553493  T
Q  243 ctatccattccatttcttca-ttttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  18553494 ctatcaattccatttcttcatttttttagtcttctcaccatttccaccaacattattcataatttgcttccgacggctccatgacactcatca 18553586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 108 - 334
Target Start/End: Complemental strand, 20417682 - 20417455
Alignment:
Q  108 gtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagactta 207  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20417682 gtgtattgagagccttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagactta 20417583  T
Q  208 tcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcatt-ttttagtcttctcaccatttccaccaacaatattcataattt 306  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  20417582 tcactttcttggattagaaagtgtggcgtccctgtctatcaattccatttcttcatttttttagtcttctcaccatttccaccaacattattcataattt 20417483  T
Q  307 gcttccgacggctccgtggcactcatca 334  Q
    ||||||||||||||||||||||||||||    
T  20417482 gcttccgacggctccgtggcactcatca 20417455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 20417817 - 20417683
Alignment:
Q  37 caagtgctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 136  Q
    |||| |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20417817 caagagctctataaattgtaagtttcattatgaaatagaaaaagttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggtt 20417718  T
Q  137 ctggattgaaccaaccttgatcttatcaagaaatc 171  Q
    |||||||||||||||||||||||||||||||||||    
T  20417717 ctggattgaaccaaccttgatcttatcaagaaatc 20417683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 64 - 265
Target Start/End: Complemental strand, 6230808 - 6230608
Alignment:
Q  64 ctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatc 163  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  6230808 ctatgaaataaaaaag-ttgaattttgtagaattttacacatatgtgtattgagagttttgactcttgtggttctggattgaaccatccttgatcttatc 6230710  T
Q  164 aagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaagtgtggcgtccctgtctatccattccatttcttc 261  Q
    ||||||||| ||||||| |||||||| |  ||||||| | |||||||  |||| |||||||  |||| |||  |  ||||||||||||||||||||||||    
T  6230709 aagaaatcacatttcttatggcgatctt--catccatcggcttatcattcttttttggattgaaaagagtgtggcgcctgtctatccattccatttcttc 6230612  T
Q  262 attt 265  Q
    ||||    
T  6230611 attt 6230608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 21299442 - 21299377
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||   || |||||||||||||||    
T  21299442 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 21299377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 2147908 - 2147847
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  2147908 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 2147847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 12639527 - 12639568
Alignment:
Q  199 atagacttatcactttcttggattagaaagtgtggcgtccct 240  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  12639527 atagacttatcattttctaggattagaaagtgtggcgtccct 12639568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 334
Target Start/End: Original strand, 20127003 - 20127318
Alignment:
Q  19 ccattgagatacttgcaacaagtgctctataaattgtaagtttctctatgaaat-agaaaaggttgaattttatagaattttacacatatgtgtattgag 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||||    
T  20127003 ccattgagatacttgcaacaagtgctctataaattgtaagtttctctatgaaatgaaaaaaagttgaatattatagaattttacacatatgtgtattgag 20127102  T
Q  118 agctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttctt 217  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20127103 agctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcgctttctt 20127202  T
Q  218 ggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacgg 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  20127203 ggattagaaagtgtggcgtccctgtctatccattccatttcttca-gttttagtcttttcaccattttcaccaacaatattcataatttgcttccgacgg 20127301  T
Q  318 ctccgtggcactcatca 334  Q
    |||||||||||||||||    
T  20127302 ctccgtggcactcatca 20127318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 37 - 334
Target Start/End: Complemental strand, 22062345 - 22062047
Alignment:
Q  37 caagtgctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 136  Q
    |||| |||||||||||||||||||||  ||||||||| |  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062345 caagagctctataaattgtaagtttcattatgaaataaaggaagttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 22062246  T
Q  137 ctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062245 ctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgt 22062146  T
Q  237 ccctgtctatccattccatttcttcatt-ttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  22062145 ccctgtctatccattccatttcttcatttttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctcagtgacactcatca 22062047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 75 - 334
Target Start/End: Original strand, 6473763 - 6474022
Alignment:
Q  75 aaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcata 174  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  6473763 aaaaagttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggttctggattgaatcatccttgatcttatcaagaaatcaca 6473862  T
Q  175 tttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtctt 274  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6473863 tttcttgtgacgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtctt 6473962  T
Q  275 ctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
     |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  6473963 ttcaccatttccaccaacattaatcataatttgcttccgacggctccgtggcactcatca 6474022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 80 - 334
Target Start/End: Complemental strand, 20190588 - 20190330
Alignment:
Q  80 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 179  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || || ||    
T  20190588 gttgaactttgtagaattttacacttatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagacattatgtt-ct 20190490  T
Q  180 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcat-----tttttagtctt 274  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||     |||||||||||    
T  20190489 tgtggcaatcctcgcttccatagacttatcagtttcttggattagaaagtgtggcgtccttgtctatccattccatttcttcattttaatttttagtctt 20190390  T
Q  275 ctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
     |||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  20190389 ttcaccatttccaccaacattattcataagttgcttccgacggctccgtgacactcatca 20190330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 83 - 334
Target Start/End: Complemental strand, 24157210 - 24156956
Alignment:
Q  83 gaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||| ||||||||    
T  24157210 gaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttatggatcgaaccatccttgatcttatcaagaaatcat-tttcttgt 24157112  T
Q  183 ggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcatttt-----ttagtcttctc 277  Q
    || ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||     | |||| | ||    
T  24157111 ggtgatcctcgcatccattgacttatcactttcttgaattagaaagtgcggcgtccctgtctatccattccatttcttcattttaattttgagtcatttc 24157012  T
Q  278 accatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||| |||||||||  | |||||||| || |||||||||||||||| | |||||||||    
T  24157011 accttttccaccataattattcatagtt-gcttccgacggctccgcgacactcatca 24156956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 351 - 419
Target Start/End: Original strand, 49032721 - 49032789
Alignment:
Q  351 ctctgcatgatgctgctcaagatgctgctgctgaggaggctcgacatactgctgctcaggctgataccc 419  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49032721 ctctgcatgctgctgctcaggatgctgctgctgaggaggctcgacatactgctgctcaggctgataccc 49032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 351 - 439
Target Start/End: Complemental strand, 28444041 - 28443953
Alignment:
Q  351 ctctgcatgatgctgctcaagatgctgctgctgaggaggctcgacatactgctgctcaggctgatacccctcgtgaaactgaggttgat 439  Q
    ||||||||| |||||||||   |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  28444041 ctctgcatgctgctgctcattctgctgctgttgaggaggctccacatactgctgctcaggctgatacccctcgtgaaactaaggctgat 28443953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 37260438 - 37260482
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct 240  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  37260438 tccatagacttatcattttctaggattagaaagtgtggcgtccct 37260482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 40554445 - 40554509
Alignment:
Q  129 ttgtggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    |||||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  40554445 ttgtggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 40554509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 48463137 - 48463195
Alignment:
Q  134 gttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||   ||||||||||||||||| ||  ||||||||| ||||||||    
T  48463137 gttctggattgaaccattattgatcttatcaagaaaccacgtttcttgtgacgatcctc 48463195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 19 - 334
Target Start/End: Original strand, 136689 - 137004
Alignment:
Q  19 ccattgagatacttgcaacaagtgctctataaattgtaagtttctctatgaaatagaaaag-gttgaattttatagaattttacacatatgtgtattgag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||    
T  136689 ccattgagatacttgcaacaagtgctctataaattgtaagtttctctatgaaataaaaaaaagttgaatattatagaattttacacatatgtgtattgag 136788  T
Q  118 agctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttctt 217  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  136789 agctttgtctcttgtggttctggattaaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttctt 136888  T
Q  218 ggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacgg 317  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||| ||||| ||||| |||||| ||||||||||    
T  136889 ggattagaaagtgtggcgtccctgtctatccaatccatttcttca-tttttagtcttttcaccatttccatcaacattattcttaatttccttccgacgg 136987  T
Q  318 ctccgtggcactcatca 334  Q
    || ||||||||||||||    
T  136988 cttcgtggcactcatca 137004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 248; Significance: 1e-137; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 43 - 334
Target Start/End: Original strand, 20730831 - 20731122
Alignment:
Q  43 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 142  Q
    ||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20730831 ctctataaattgtaactttctctatgaaataagataggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 20730930  T
Q  143 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20730931 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 20731030  T
Q  243 ctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    |||||||||| ||||||||| | ||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  20731031 ctatccattcaatttcttcaatctttagtcttttcaccatttccatcaacattattcttaatttgcttccgacggctccgtggcactcatca 20731122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 351 - 439
Target Start/End: Complemental strand, 9385310 - 9385222
Alignment:
Q  351 ctctgcatgatgctgctcaagatgctgctgctgaggaggctcgacatactgctgctcaggctgatacccctcgtgaaactgaggttgat 439  Q
    |||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9385310 ctctacatgctgttgctcaagatgctgctgctgaggaggctcgacatactgctgctcaggctgatacccctcgtgaaactgaggctgat 9385222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 18446237 - 18446306
Alignment:
Q  197 ccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcatttt 266  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||    
T  18446237 ccatagacttatcactttcttggattagaaagtgtggcgtccctttctttccattccatttctccatttt 18446306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 16417600 - 16417535
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||   || |||||||||||||||    
T  16417600 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 16417535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 18774349 - 18774284
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||   || |||||||||||||||    
T  18774349 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 18774284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 23015870 - 23015809
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  23015870 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 23015809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 243; Significance: 1e-134; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 80 - 334
Target Start/End: Complemental strand, 9595594 - 9595340
Alignment:
Q  80 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9595594 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttct 9595495  T
Q  180 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcac 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  9595494 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccatttcatttcttcattttttagtcttttcac 9595395  T
Q  280 catttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9595394 catttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 9595340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 80 - 334
Target Start/End: Complemental strand, 9646557 - 9646303
Alignment:
Q  80 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9646557 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttct 9646458  T
Q  180 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcac 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  9646457 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccatttcatttcttcattttttagtcttttcac 9646358  T
Q  280 catttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9646357 catttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 9646303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 43 - 335
Target Start/End: Original strand, 32706295 - 32706589
Alignment:
Q  43 ctctataaattgtaagtttctctatgaaatagaaa-aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctgga 141  Q
    ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32706295 ctctataaattgtaactttctctatgaaataaaaagaagttgaattttatagaattttacacatatgtgtattaagagctttgtctcttgtggttctgga 32706394  T
Q  142 ttgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctg 241  Q
    |||||||| |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||     
T  32706395 ttgaaccatccttgatcttatcaagaaatcacatttcttgtggcaatcctcgcatctatagacttatcactttcttggattagaaagtgtggtgtccctc 32706494  T
Q  242 tctatccattccatttcttcattttt-tagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatcag 335  Q
    |||||| ||| ||||||||||||||| |||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  32706495 tctatctatttcatttcttcatttttctagttttttcaccatttccaccaacattattcttaatttgcttccgacggctccgtggcactcatcag 32706589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 41 - 192
Target Start/End: Complemental strand, 5247589 - 5247437
Alignment:
Q  41 tgctctataaattgtaagtttctctat-gaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctg 139  Q
    |||||||||||||||||||||  |||  |||||| || | |||||||| | ||||||||||||| |||| || |||||||||||||||||| ||||||||    
T  5247589 tgctctataaattgtaagttttcctaaagaaataaaacaagttgaattgtgtagaattttacacgtatgagtgttgagagctttgtctcttatggttctg 5247490  T
Q  140 gattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||| || ||||||||||||||||||||||||||| |||||| |||||||    
T  5247489 gattgaatcatccttgatcttatcaagaaatcatattttttgtggagatcctc 5247437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 8524197 - 8524272
Alignment:
Q  351 ctctgcatgatgctgctcaagatgctgctgctgaggaggctcgacatactgctgctcaggctgatacccctcgtga 426  Q
    ||||||||| ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  8524197 ctctgcatgttgctgctcaggatgctgctgctgaggaggctaaacatactgctgctcaggctgatacccctggtga 8524272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 16157057 - 16157122
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||   || |||||||||||||||    
T  16157057 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 16157122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 14575663 - 14575569
Alignment:
Q  133 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 228  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  14575663 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 14575569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 14578939 - 14578845
Alignment:
Q  133 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 228  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  14578939 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 14578845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 21368689 - 21368624
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||   || |||||||||||||||    
T  21368689 tccatagacttatcattttctaggattagaaagtgtggcatccctaaactctccattccatttctt 21368624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 22707733 - 22707689
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct 240  Q
    ||||||| ||||||| ||||| ||||||||||||| |||||||||    
T  22707733 tccataggcttatcagtttctaggattagaaagtgaggcgtccct 22707689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 78 - 334
Target Start/End: Complemental strand, 15019442 - 15019186
Alignment:
Q  78 aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatattt 177  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15019442 aggttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatattt 15019343  T
Q  178 cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15019342 cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcatcttttagtcttctc 15019243  T
Q  278 accatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15019242 accatttccaccaacaatattcataatttgcttccgacggctccgtagcactcatca 15019186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 78 - 334
Target Start/End: Complemental strand, 15017802 - 15017546
Alignment:
Q  78 aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatattt 177  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15017802 aggttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatattt 15017703  T
Q  178 cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctc 277  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  15017702 cttatggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccattccttcattttttagtcttttc 15017603  T
Q  278 accatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15017602 accatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 15017546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 83 - 334
Target Start/End: Complemental strand, 39488304 - 39488053
Alignment:
Q  83 gaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  39488304 gaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaatcatccttgatcttatcaagaaatcatatttcttgt 39488205  T
Q  183 ggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcaccat 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||     
T  39488204 ggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtattttcaccaa 39488105  T
Q  283 ttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39488104 ttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 39488053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 37 - 334
Target Start/End: Complemental strand, 17266902 - 17266600
Alignment:
Q  37 caagtgctctataaattgtaagtttctctatgaaatagaaa---aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtg 133  Q
    |||| |||||||||||||||||||||  ||||||||| |||   | |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17266902 caagagctctataaattgtaagtttcattatgaaataaaaagagaagttgaattttgtagaattttacacatatgtgtattgagagctttgtctcttgtg 17266803  T
Q  134 gttctggattgaaccaaccttgatcttatcaagaaatcatattt-cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtg 232  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17266802 gttctggattgaaccatccttgatcttatcaagaaatcagattttcttgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtg 17266703  T
Q  233 gcgtccctgtctatccattccatttcttcatt-ttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactca 331  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17266702 gcgtccctgtctatccattccatttcttcatttttttagtcttttcaccatttccaccaacattattcataatttgcttccgacggctccgtggcactca 17266603  T
Q  332 tca 334  Q
    |||    
T  17266602 tca 17266600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 37 - 334
Target Start/End: Original strand, 34098671 - 34098967
Alignment:
Q  37 caagtgctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 136  Q
    |||| |||||||||||||||||||||  ||||||||| | || |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  34098671 caagagctctataaattgtaagtttcattatgaaataaagaaagttgaattttatagaattttacacttatgtgtattgagaactttgtctcttgtggtt 34098770  T
Q  137 ctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgt 236  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  34098771 ctggattgaaccatccttgatcttatcaagaaattat-tttcttgtggcgatcctcgcatctatagacttatcactttattggattagaaagtgtggcgt 34098869  T
Q  237 ccctgtctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  34098870 ccctgtctatccatttcatttcttcattttttagtcatttcaccatttccaccaacattattcataatttgcttccgacggctcagtgacactcatca 34098967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 80 - 335
Target Start/End: Original strand, 9167179 - 9167434
Alignment:
Q  80 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9167179 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 9167278  T
Q  180 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcac 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||     
T  9167279 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatcaatttcatttcttcattttttagtcttttcat 9167378  T
Q  280 catttccaccaacaatattcataatttgcttccgacggctccgtggcactcatcag 335  Q
    |||||||| ||||| ||||| |||||| |||||||||||| |||| ||||||||||    
T  9167379 catttccatcaacattattcttaatttacttccgacggcttcgtgacactcatcag 9167434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 37 - 335
Target Start/End: Original strand, 17780664 - 17780970
Alignment:
Q  37 caagtgctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 136  Q
    |||| |||||||| |||||||||||||| |||||||  |  | ||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||    
T  17780664 caagagctctatatattgtaagtttctcaatgaaatgaaggaagttgaattttatacaattttacacatatgtgtattgagagctct-tctcttgtggtt 17780762  T
Q  137 ctggatt----gaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattag--aaag 228  Q
     ||||||    |||| | | ||||| |||||||||||||| |||||||||||||||||| ||||  |  | |||||||  ||||||||||||||  ||||    
T  17780763 atggattgatcgaactatctttgattttatcaagaaatcacatttcttgtggcgatccttgcatgtaccggcttatcaatctttcttggattagaaaaag 17780862  T
Q  229 tgtggcgtccctgtctatccattccatttcttcatttttt---agtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtgg 325  Q
    || |||| |||||||  |||| | |||||| |||||||||   | |||| ||||| |||||| ||| ||||||| ||||| ||||  ||||| || | |     
T  17780863 tgcggcgcccctgtc--tccagttcatttcatcatttttttaaaatcttttcaccttttccatcaaaaatattcctaattcgcttatgacggttctgcga 17780960  T
Q  326 cactcatcag 335  Q
    ||||||||||    
T  17780961 cactcatcag 17780970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 23090998 - 23090830
Alignment:
Q  59 tttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatc 158  Q
    ||||||||||||||| || | ||| ||||||||||||||||| ||||||||||||||| |||||||||||||| |||| | ||||||| || ||||||||    
T  23090998 tttctctatgaaataaaataagttaaattttatagaattttatacatatgtgtattgatagctttgtctcttgcggttttagattgaatcatccttgatc 23090899  T
Q  159 ttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 228  Q
    ||||||| ||||  | ||||||||||||||| |   |||||| | |||||||  ||||||||||||||||||    
T  23090898 ttatcaataaattct-tttcttgtggcgatctt--tatccatcggcttatcattctttcttggattagaaag 23090830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 20265024 - 20264941
Alignment:
Q  251 tccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||||||||||| ||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  20265024 tccatttcttctttttttaatcttttcaccatttccacaaacattattcataatttgcttccgacggctccgtgacactcatca 20264941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 373 - 439
Target Start/End: Complemental strand, 40452041 - 40451975
Alignment:
Q  373 tgctgctgctgaggaggctcgacatactgctgctcaggctgatacccctcgtgaaactgaggttgat 439  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  40452041 tgctgctgctgagcaggctctacatactgctgctcaggctgatacccctcgtgaaactgaggctgat 40451975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 633591 - 633637
Alignment:
Q  373 tgctgctgctgaggaggctcgacatactgctgctcaggctgataccc 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||    
T  633591 tgctgctgctgaggaggctccacatactgctgctcagactgataccc 633637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 40452090 - 40452035
Alignment:
Q  351 ctctgcatgatgctgctcaagatgctgctgctgaggaggctcgacatactgctgct 406  Q
    ||||||||| |||||||||   | ||||||||||||||||||||||||||||||||    
T  40452090 ctctgcatgctgctgctcatcctactgctgctgaggaggctcgacatactgctgct 40452035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 19460135 - 19460201
Alignment:
Q  110 gtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatt 176  Q
    ||||| |||| |||||| ||||||||| || ||||||| |  |||||||||||||||||||||||||    
T  19460135 gtattaagagttttgtcccttgtggttatgaattgaactattcttgatcttatcaagaaatcatatt 19460201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 633542 - 633597
Alignment:
Q  351 ctctgcatgatgctgctcaagatgctgctgctgaggaggctcgacatactgctgct 406  Q
    ||||||||| |||||||||   | ||||| ||||||||||||||||||||||||||    
T  633542 ctctgcatgctgctgctcatcctactgctactgaggaggctcgacatactgctgct 633597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 19180550 - 19180483
Alignment:
Q  126 ctcttgtggttctggattgaaccaacctt-gatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||| ||||||||||||| |||||  || ||||||||||||||| ||  ||||||||||||||||||    
T  19180550 ctcttttggttctggattggaccaaattttgatcttatcaagaaaccacgtttcttgtggcgatcctc 19180483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 11475673 - 11475714
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtc 237  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||    
T  11475673 tccatggacttatcattttctaggattagaaagtgtggcgtc 11475714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 19459912 - 19459973
Alignment:
Q  132 tggttctggattgaaccaacctt-gatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    |||||||  |||||||||| ||| |||||||| |||||| ||| ||||||||||||||||||    
T  19459912 tggttctaaattgaaccaaactttgatcttataaagaaagcatgtttcttgtggcgatcctc 19459973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 11099045 - 11099105
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcct 191  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||| |||||    
T  11099045 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcaatcct 11099105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 79 - 334
Target Start/End: Complemental strand, 244599 - 244345
Alignment:
Q  79 ggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttc 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  244599 ggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttc 244500  T
Q  179 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctca 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  244499 ttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcat-ttttagtcttttca 244401  T
Q  279 ccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  244400 ccattttcaccaacaatattcataatttgcttccgacggctccgtggcactcatca 244345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 43 - 334
Target Start/End: Original strand, 4568208 - 4568498
Alignment:
Q  43 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 142  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  4568208 ctctataaattgtaactttctctatgaaataaaaaaagttgaattttatagaattttatacttatgtgtattgagagctttgtctcttgtggttctggat 4568307  T
Q  143 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 242  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4568308 tgaaccattcttgatcttatcaaaaaatcatatttcttgtggcgatcctcgcatccatagacttatcacttttttggattagaaagtgtggcgtccctgt 4568407  T
Q  243 ctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  4568408 ctatccatt-catttcttcattttttagtcttttcaccatttccaccaacaatattcataatttgcttccgacggctcagtggtactcatca 4568498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 80 - 334
Target Start/End: Original strand, 29950111 - 29950365
Alignment:
Q  80 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 179  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29950111 gttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 29950210  T
Q  180 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcac 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||     
T  29950211 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattacatttcttcattttttagtcttttcat 29950310  T
Q  280 catttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| || ||||||    
T  29950311 catttccaccaacaatattcataattcacttccgacggctccgtgacattcatca 29950365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 80 - 334
Target Start/End: Original strand, 29951749 - 29952003
Alignment:
Q  80 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 179  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29951749 gttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttct 29951848  T
Q  180 tgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcac 279  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||     
T  29951849 tgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattacatttcttcattttttagtcttttcat 29951948  T
Q  280 catttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| || ||||||    
T  29951949 catttccaccaacaatattcataattcacttccgacggctccgtgacattcatca 29952003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 11126518 - 11126379
Alignment:
Q  132 tggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 231  Q
    ||||||| ||||| |||||  |||||| |||||||||  |   |||||||||| |||||||    ||||||||||| |||||||||||||||||||||||    
T  11126518 tggttcttgattggaccaattttgatcatatcaagaatcc---tttcttgtggtgatcctcaatcccatagacttaccactttcttggattagaaagtgt 11126422  T
Q  232 ggcgtccctgtctatccattccatttcttcattttttagtctt 274  Q
    ||| ||||||| | ||||||||||||||  |||||| ||||||    
T  11126421 ggcatccctgtatttccattccatttctcaatttttgagtctt 11126379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 431
Target Start/End: Complemental strand, 6703459 - 6703401
Alignment:
Q  373 tgctgctgctgaggaggctcgacatactgctgctcaggctgatacccctcgtgaaactg 431  Q
    |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||    
T  6703459 tgctgctgctgaggaggctccacatactgctgctcaggttgacacccctcgtgaaactg 6703401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 285
Target Start/End: Original strand, 34597760 - 34597919
Alignment:
Q  126 ctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatc--actttcttggatta 223  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||   ||| |||| | ||||||  ||||||   |||||||   |||||||| ||||    
T  34597760 ctcttgtggttctggattgaaccatcctt-atcttatcaagaaatc--cttttttgtagagatcct--catccaccaacttatcgttctttcttgaatta 34597854  T
Q  224 gaa--agtgtggcgtccctgtctatccattccatttcttcatt-ttttagtcttctcaccatttc 285  Q
    |||  ||||| | || | ||||||||||||||||||||||||| ||| |||||| ||||| ||||    
T  34597855 gaaagagtgtagtgttcttgtctatccattccatttcttcattgtttgagtcttttcaccttttc 34597919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 6703508 - 6703453
Alignment:
Q  351 ctctgcatgatgctgctcaagatgctgctgctgaggaggctcgacatactgctgct 406  Q
    ||||||||| |||||||||   | ||||||||||||||||||||||||||||||||    
T  6703508 ctctgcatgttgctgctcatcctactgctgctgaggaggctcgacatactgctgct 6703453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 22821341 - 22821276
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||   || |||||||||||||||    
T  22821341 tccatagacttatcattttctaagattagaaagtgtggcgttcctaaactctccattccatttctt 22821276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 43 - 334
Target Start/End: Complemental strand, 6050419 - 6050127
Alignment:
Q  43 ctctataaattgtaagtttctctatgaaatagaaaag--gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctgg 140  Q
    ||||||||||||||| ||| ||||||||||| ||||   ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6050419 ctctataaattgtaactttttctatgaaataaaaaaaaagttgaatattatagaattttacacatatgtgtattaagagctttgtctcttgtggttctgg 6050320  T
Q  141 attgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccct 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6050319 attgaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccct 6050220  T
Q  241 gtctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6050219 gtctatccattccatttcttcat-ttttagtcttttcaccattttcaccaacaatattcataatttgcttccgacggcttcgtggcactcatca 6050127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 78 - 331
Target Start/End: Original strand, 15409791 - 15410043
Alignment:
Q  78 aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatattt 177  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15409791 aggttgaatattatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatattt 15409890  T
Q  178 cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  15409891 cttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttca-tttttagtcttttc 15409989  T
Q  278 accatttccaccaacaatattcataatttgcttccgacggctccgtggcactca 331  Q
    |||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||    
T  15409990 accatttccatcaacattattcttaatttgcttccgacggcttcgtggcactca 15410043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 43 - 334
Target Start/End: Original strand, 33809331 - 33809625
Alignment:
Q  43 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 142  Q
    |||||||||| |||||||| ||||||||||| || | |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||| |||||    
T  33809331 ctctataaatcgtaagtttttctatgaaataaaataagttgaattttatagaattttacacatatgtgtgttgagagtcttgtctcttgtggttttggat 33809430  T
Q  143 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaa--agtgtggcgtcc 238  Q
      ||||| |||| |||||      ||||    |||||||||||||||||||||||||| | |||||||  |||||||||||| |||  ||||||||| ||    
T  33809431 caaaccatccttaatctt------aaatttcttttcttgtggcgatcctcgcatccatcggcttatcattctttcttggattggaaagagtgtggcgccc 33809524  T
Q  239 ctgtctatccattccatttcttc----attttttagtcttctcaccatttccacc--aacaatattcataatttgcttccgacggctccgtggcactcat 332  Q
     |||||||| |||||||||||||    |||||| | |||| ||||||||||||||  || ||||||| |||||||||||||||||||||  | |||||||    
T  33809525 ttgtctatcgattccatttcttcacttatttttgaatcttttcaccatttccaccaaaaaaatattc-taatttgcttccgacggctccacgacactcat 33809623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 216 - 330
Target Start/End: Complemental strand, 23732468 - 23732354
Alignment:
Q  216 ttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgac 315  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  23732468 ttggatttgaaagtgtggcgtccctgtctatccgttctatttcttcattttttagtctcctcaccatttcaaccaacaatattcataatttgcttccgac 23732369  T
Q  316 ggctccgtggcactc 330  Q
    ||||||||| |||||    
T  23732368 ggctccgtgacactc 23732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 351 - 439
Target Start/End: Complemental strand, 940676 - 940588
Alignment:
Q  351 ctctgcatgatgctgctcaagatgctgctgctgaggaggctcgacatactgctgctcaggctgatacccctcgtgaaactgaggttgat 439  Q
    ||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  940676 ctctgcatgttgttgctcaggatgctgctgctgaggaggctcgacatactgctgctcaggctgatacctctcgtgaaactgaggctgat 940588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 44794775 - 44794840
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||   || |||||||||||||||    
T  44794775 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 44794840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 44792948 - 44792884
Alignment:
Q  129 ttgtggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    |||||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  44792948 ttgtggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 44792884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 24808258 - 24808197
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  24808258 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 24808197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 192
Target Start/End: Original strand, 31939075 - 31939114
Alignment:
Q  153 ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  31939075 ttgatcttatcaagaaaccatgtttcttgtggcgatcctc 31939114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 37 - 334
Target Start/End: Original strand, 54722 - 55019
Alignment:
Q  37 caagtgctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggtt 136  Q
    |||| |||||||||||||||||||||  ||||||||| |  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  54722 caagagctctataaattgtaagtttcattatgaaataaaggaagttgaattttatagaattttacacatatgtgtattgagagccttgtctcttgtggtt 54821  T
Q  137 ctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  54822 ctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatactcgcatccatagacttatcactttcttggattagaaagtgtggcgt 54921  T
Q  237 ccctgtctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    |||| | |||||||||||||||||||| |||||||||| ||| |||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  54922 ccctatatatccattccatttcttcatcttttagtcttttcatcatttccatcaacattattcttaatttgcttccgacggctccgtggcattcatca 55019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 43 - 334
Target Start/End: Complemental strand, 4788 - 4497
Alignment:
Q  43 ctctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggat 142  Q
    ||||||||||||||| ||| |||||||||||  | | ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4788 ctctataaattgtaactttttctatgaaataagataagttgaatattatagaattttacacatatgtgtattgagagccttgtctcttgtggttctggat 4689  T
Q  143 tgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgt 242  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4688 tgaaccaaccttgatcttatcaagaaatcatatttcttgcggcgatccttgcatccatagacttatcactttcttggattagaaagtgtggcatccctgt 4589  T
Q  243 ctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  4588 ctatccattccatttctacattttttagtcttttcatcatttccaccaacattattcataatttgcttccgacggctccgtgatactcatca 4497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 76 - 334
Target Start/End: Original strand, 5553462 - 5553720
Alignment:
Q  76 aaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatat 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  5553462 aaaggttgaattttatagaattttacacatatgtgtattgagagctttatctcttgtggttctggattgaaccatcattgatcttatcaagaaatcatat 5553561  T
Q  176 ttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttc 275  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  5553562 ttcttgtggcgatcctcgcatacatagacttatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttt 5553661  T
Q  276 tcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||| |||||||| ||||| ||||| |||||||||||||||||||||||| |||||||||    
T  5553662 tcatcatttccatcaacattattcttaatttgcttccgacggctccgtgacactcatca 5553720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 45 - 305
Target Start/End: Complemental strand, 17237030 - 17236774
Alignment:
Q  45 ctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattg 144  Q
    ||||| ||||||||||||| ||||||||| || | |||||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||    
T  17237030 ctatatattgtaagtttctttatgaaataaaacaagttgaattttgtagaattttacacttatgtgtatcgagagttttgtctcttgtggttctggtttg 17236931  T
Q  145 aaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtct 244  Q
    |||||       ||||||||| |||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| |||||||||    
T  17236930 aaccat------tcttatcaaaaaatcacatttcttgtggcgatcctcgcatcgataaacttatcactttcttggattaaaaagtgtggcatccctgtct 17236837  T
Q  245 atccattccatttcttcatt--ttttagtcttctcaccatttccaccaacaatattcataatt 305  Q
     |||||||||||||||||||  |||||||||| |||||||||||||||||| |||||||||||    
T  17236836 gtccattccatttcttcattttttttagtcttttcaccatttccaccaacattattcataatt 17236774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 111 - 334
Target Start/End: Original strand, 22271157 - 22271383
Alignment:
Q  111 tattgagagctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatc--ctcgcatccatagacttat 208  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  22271157 tattgagagttttgtctcttgtggttctggattgaaccatcattgatcttatcaagaaatcacatttcttgtggcgatcatctcgcatccatagacttat 22271256  T
Q  209 cactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcatttttt-agtcttctcaccatttccaccaacaatattcataa-ttt 306  Q
    |||||||| ||||||||||||||||||||   || ||||||||| |||||| |||||||| |||||| | ||| ||| |||||| ||||||| ||| |||    
T  22271257 cactttctgggattagaaagtgtggcgtctgagtttatccattctatttctacattttttcagtctttttaccttttacaccaaaaatattcctaatttt 22271356  T
Q  307 gcttccgacggctccgtggcactcatca 334  Q
    |||||||| ||||||| | |||||||||    
T  22271357 gcttccga-ggctccgcgacactcatca 22271383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 23433138 - 23433262
Alignment:
Q  206 tatcactttcttggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatt 305  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||| ||||    
T  23433138 tatcactttcttggattagaaagtgtggcgtccatgtctatccattccatttcttca-tttttagtcttttcaccattttcaccaacattattcagaatt 23433236  T
Q  306 tgcttccgacggctccgtggcactca 331  Q
    ||||||||||||||||||| ||||||    
T  23433237 tgcttccgacggctccgtgacactca 23433262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 16345487 - 16345391
Alignment:
Q  19 ccattgagatacttgcaacaagtgctctataaattgtaagtttctctatgaaat--agaaaaggttgaattttatagaattttacacatatgtgtat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||    
T  16345487 ccattgagatacttgcaacaagtgctctataaattgtaagtttctctatgaaataaaaaaaaagttgaattttatagaattttacacatatgtgtat 16345391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 21563970 - 21563910
Alignment:
Q  373 tgctgctgctgaggaggctcgacatactgctgctcaggctgatacccctcgtgaaactgag 433  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  21563970 tgctgctgctgaggaggctcgacatactgctgctcaggtcgatacccctcgtgaaactgag 21563910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 16019556 - 16019425
Alignment:
Q  132 tggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgt 231  Q
    ||||||||||||  |||||  |||||| |||||||||  |   |||||||||| |||||||    ||| |||||||||||||||||||||||||||||||    
T  16019556 tggttctggatttgaccaattttgatcatatcaagaatcc---tttcttgtggtgatcctcaatcccagagacttatcactttcttggattagaaagtgt 16019460  T
Q  232 ggcgtccctgtctatccattccatttcttcatttt 266  Q
     | |||||| ||| |||||||||||||| ||||||    
T  16019459 agtgtccctttctttccattccatttctccatttt 16019425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 39687753 - 39687828
Alignment:
Q  351 ctctgcatgatgctgctcaagatgctgctgctgaggaggctcgacatactgctgctcaggctgatacccctcgtga 426  Q
    ||||||||| || |||| | |||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  39687753 ctctgcatgctgttgcttaggatgctgctgctgaggaggctcgacatattgctgctcaggttgatacccctggtga 39687828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 13179935 - 13179870
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||   || |||||||||||||||    
T  13179935 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 13179870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 13184593 - 13184528
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||   || |||||||||||||||    
T  13184593 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 13184528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 13957070 - 13956976
Alignment:
Q  133 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 228  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  13957070 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 13956976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 15381933 - 15382027
Alignment:
Q  133 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 228  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  15381933 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 15382027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 15387669 - 15387763
Alignment:
Q  133 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 228  Q
    |||||||||||| |||||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  15387669 ggttctggattggaccaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 15387763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 33758011 - 33757949
Alignment:
Q  199 atagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    |||||||||||| ||||| |||||||||||||||||||||||   || |||||||||||||||    
T  33758011 atagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 33757949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 16347198 - 16347259
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  16347198 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 16347259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 47418097 - 47418036
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  47418097 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 47418036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 13962803 - 13962709
Alignment:
Q  133 ggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatca--ctttcttggattagaaag 228  Q
    |||||||||||| | |||   |||||||||||||||||| | |||||||||| ||||||  ||||||||| |||||||  || |||||||||||||||    
T  13962803 ggttctggattggatcaaaactgatcttatcaagaaatcct-tttcttgtggtgatcct--catccataggcttatcattctctcttggattagaaag 13962709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 37 - 334
Target Start/End: Original strand, 33166 - 33465
Alignment:
Q  37 caagtgctctataaattgtaagtttctctatgaaatagaaa---aggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtg 133  Q
    |||| |||||||||||||||||||||  ||||||||| |||   | |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33166 caagagctctataaattgtaagtttcattatgaaataaaaagagaagttgaattttgtagaattttacacatatgtgtattgagagctttgtctcttgtg 33265  T
Q  134 gttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtgg 233  Q
    |||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33266 gttctggattgaaccatccttgatcttatcaagaaattat-tttcttgtggcgatcctcgcatccatagacttatcaatttcttggattagaaagtgtgg 33364  T
Q  234 cgtccctgtctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatc 333  Q
    |||||||||||||| |||||||||||||||||| ||||||| |||||||||| |||||||| |||||||||||| |||||||||||||||| ||||||||    
T  33365 cgtccctgtctatcaattccatttcttcattttctagtcttttcaccatttctaccaacaaaattcataatttgtttccgacggctccgtgacactcatc 33464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 213; Significance: 1e-116; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 25980 - 25724
Alignment:
Q  19 ccattgagatacttgcaacaagtgctctataaattgtaagtttctctatgaaatagaaa-aggttgaattttatagaattttacacatatgtgtattgag 117  Q
    ||||||||||||||||||||||| |||||||||||||||||||   ||||||||| ||| | ||||||||||||||||||||||||||||||||| ||||    
T  25980 ccattgagatacttgcaacaagtactctataaattgtaagttttattatgaaataaaaagaagttgaattttatagaattttacacatatgtgtagtgag 25881  T
Q  118 agctttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttctt 217  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25880 agctttgtctcttgtagttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatatacttatcactttctt 25781  T
Q  218 ggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtctt 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25780 ggattagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtctt 25724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 44 - 334
Target Start/End: Complemental strand, 1065 - 776
Alignment:
Q  44 tctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggatt 143  Q
    |||||| |||||||||||| | ||||| || |||| || |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1065 tctatatattgtaagtttcacaatgaa-taaaaaaagtggaatattatagaattttacacatatgtgtattgagaactttgtctcttgtggttctggatt 967  T
Q  144 gaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtc 243  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  966 gaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctctcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtc 867  T
Q  244 tatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    ||||||||||||||||||| | |||| |||| |||||||||||| ||||| ||||| |||||| |||||||||||||||||||||||||||    
T  866 tatccattccatttcttcaatctttattcttttcaccatttccatcaacattattcttaattttcttccgacggctccgtggcactcatca 776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 206; Significance: 1e-112; HSPs: 3)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 45 - 334
Target Start/End: Original strand, 6576 - 6863
Alignment:
Q  45 ctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattg 144  Q
    ||||| ||||||||||||| ||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  6576 ctatatattgtaagtttctttatgaaataaacaag-ttgaattttatagaattttacacttatgtgtattgagagctttgtctcttgtggttttggattg 6674  T
Q  145 aaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtct 244  Q
    |||||  ||||||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6675 aaccattcttgatcttatcaagaattttt-tttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtct 6773  T
Q  245 atccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcatca 334  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||    
T  6774 atccattccatttcttcattttctagtcttttcaccatttccaccaacattcttcttaatttgcttccgacggctccgtgacactcatca 6863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 45 - 332
Target Start/End: Original strand, 9471 - 9756
Alignment:
Q  45 ctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattg 144  Q
    ||||| ||| ||||||||| ||||||||| | ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9471 ctatatattttaagtttctttatgaaataaacaag-ttgaatttgatagaattttacacttatgtgtattgagagctttgtctcttgtggttctggattg 9569  T
Q  145 aaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtct 244  Q
    |||||  |||| |||||||||||| |  | |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  9570 aaccattcttgttcttatcaagaatttct-tttcttgtggggatcctcgcatccaccgacttatcactttcttggattagaaagtgtggtgtccctgtct 9668  T
Q  245 atccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcat 332  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||| |||||||    
T  9669 atccattccatatcttcattttctagtcttttcaccatttccaccaacattattcttaatttgcttccgacgactccgtgacactcat 9756  T

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Target: scaffold0146; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 45 - 332
Target Start/End: Original strand, 17138 - 17423
Alignment:
Q  45 ctataaattgtaagtttctctatgaaatagaaaaggttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattg 144  Q
    ||||| ||| ||||||||| ||||||||| | ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17138 ctatatattttaagtttctttatgaaataaacaag-ttgaatttgatagaattttacacttatgtgtattgagagctttgtctcttgtggttctggattg 17236  T
Q  145 aaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccctgtct 244  Q
    |||||  |||| |||||||||||| |  | |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  17237 aaccattcttgttcttatcaagaatttct-tttcttgtggggatcctcgcatccaccgacttatcactttcttggattagaaagtgtggtgtccctgtct 17335  T
Q  245 atccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctccgtggcactcat 332  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||| |||||||    
T  17336 atccattccatatcttcattttctagtcttttcaccatttccaccaacattattcttaatttgcttccgacgactccgtgacactcat 17423  T

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Target: scaffold0096 (Bit Score: 181; Significance: 1e-97; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 122 - 334
Target Start/End: Complemental strand, 22730 - 22519
Alignment:
Q  122 ttgtctcttgtggttctggattgaaccaaccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggat 221  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22730 ttgtctcttgtggttctggattgaaccatccttgatcttatcaagaaatcatatttcttgtggcgatcctcgcatccatagacttatcactttcttggat 22631  T
Q  222 tagaaagtgtggcgtccctgtctatccattccatttcttcattttttagtcttctcaccatttccaccaacaatattcataatttgcttccgacggctcc 321  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||| |    
T  22630 tagaaagtgtggcgtccctgtctatccattccatttcttcat-ttttagtcttttcaccatttccatcaacattattcttaatttgcttccgacggcttc 22532  T
Q  322 gtggcactcatca 334  Q
    |||||||||||||    
T  22531 gtggcactcatca 22519  T

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Target: scaffold0269 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 1560 - 1490
Alignment:
Q  80 gttgaattttatagaattttacacatatgtgtattgagagctttgtctcttgtggttctggattgaaccaa 150  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  1560 gttgaattttatagaattttacacttatgtgtattgagagctttgtctcttatggttctggattgaaccaa 1490  T

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Target: scaffold0359 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 8812 - 8747
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||   || |||||||||||||||    
T  8812 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 8747  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 288993 - 289058
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccattccatttctt 260  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||   || |||||||||||||||    
T  288993 tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttctt 289058  T

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Target: scaffold0671 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 2155 - 2199
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct 240  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  2155 tccatagacttatcattttctaggattagaaagtgtggcgtccct 2199  T

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Target: scaffold0065 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 33824 - 33780
Alignment:
Q  196 tccatagacttatcactttcttggattagaaagtgtggcgtccct 240  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  33824 tccatagacttatcattttctaggattagaaagtgtggcgtccct 33780  T

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Target: scaffold0254 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 24372 - 24311
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  24372 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 24311  T

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Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 10911 - 10850
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  10911 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 10850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 6465 - 6526
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  6465 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 6526  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 202 - 141
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  202 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 141  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 374851 - 374790
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||||    
T  374851 tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctc 374790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 55425 - 55486
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||| ||||||||| ||  ||||||||||||||||||    
T  55425 tggttctggattgaaccatgcattgatctcatcaagaaaccacgtttcttgtggcgatcctc 55486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 241614 - 241675
Alignment:
Q  132 tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc 192  Q
    ||||||||||||||||||  | ||||||||||||||||| ||  |||||||||| |||||||    
T  241614 tggttctggattgaaccatgcgttgatcttatcaagaaaccacgtttcttgtggtgatcctc 241675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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