View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11008_high_58 (Length: 212)
Name: NF11008_high_58
Description: NF11008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11008_high_58 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 42307107 - 42306908
Alignment:
| Q |
1 |
ccgaactttgaaaattacaatgcatgaaaacaactgcagacacatgcatattggggcagtgccttacagctgtggataatacaacaaaaacacaaattaa |
100 |
Q |
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| T |
42307107 |
ccgaactttgaaaattacaatgcatgaaaacaactgcagacacatgcatattggggcagtgccttacagctgtggataatacaacaaaaacacaaattaa |
42307008 |
T |
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| Q |
101 |
atacaaataaacgcagccctctaaacaatcttaatcaaatgctgacgaaatatatgtgaagaatccccttgatcttctttgtgcatggctttctctgctt |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
42307007 |
atacaaataaacggagccctctaaacaatcttaatcaaatgctgacgaaatatatgtgaagaatccccttgatcttctttgtgcatggctttctttgctt |
42306908 |
T |
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