View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11008_low_2 (Length: 736)

Name: NF11008_low_2
Description: NF11008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11008_low_2
NF11008_low_2
[»] chr7 (9 HSPs)
chr7 (10-718)||(32888616-32889324)
chr7 (256-372)||(23117278-23117394)
chr7 (261-365)||(30900036-30900140)
chr7 (301-363)||(47822727-47822789)
chr7 (292-371)||(7245903-7245983)
chr7 (338-372)||(2219526-2219560)
chr7 (278-364)||(21173837-21173923)
chr7 (291-336)||(8558815-8558860)
chr7 (327-356)||(30644310-30644339)
[»] chr8 (5 HSPs)
chr8 (260-365)||(42822618-42822723)
chr8 (319-369)||(32616750-32616800)
chr8 (286-395)||(9714549-9714658)
chr8 (338-373)||(10987794-10987829)
chr8 (327-365)||(2722194-2722232)
[»] chr6 (13 HSPs)
chr6 (294-371)||(34881740-34881817)
chr6 (276-380)||(1912445-1912549)
chr6 (338-397)||(33735436-33735495)
chr6 (305-366)||(19390976-19391037)
chr6 (335-380)||(26373101-26373146)
chr6 (331-411)||(7932400-7932480)
chr6 (299-361)||(264088-264150)
chr6 (295-365)||(7939908-7939978)
chr6 (291-365)||(9074090-9074164)
chr6 (331-364)||(2730832-2730865)
chr6 (318-371)||(2732963-2733016)
chr6 (336-397)||(28502959-28503020)
chr6 (336-397)||(29815364-29815425)
[»] chr4 (6 HSPs)
chr4 (272-380)||(207489-207599)
chr4 (331-397)||(13298530-13298596)
chr4 (291-365)||(34417855-34417929)
chr4 (294-366)||(34417365-34417437)
chr4 (256-379)||(30617188-30617310)
chr4 (331-380)||(34581597-34581646)
[»] chr1 (8 HSPs)
chr1 (260-371)||(44417824-44417935)
chr1 (319-380)||(6025952-6026013)
chr1 (306-369)||(26161574-26161637)
chr1 (279-379)||(15255160-15255260)
chr1 (330-365)||(35742553-35742588)
chr1 (331-365)||(1118941-1118975)
chr1 (256-397)||(7991519-7991660)
chr1 (338-367)||(26161667-26161696)
[»] chr3 (7 HSPs)
chr3 (278-364)||(8936695-8936781)
chr3 (278-365)||(3533525-3533612)
chr3 (256-370)||(50402572-50402686)
chr3 (321-380)||(28802757-28802816)
chr3 (331-369)||(1138436-1138474)
chr3 (311-405)||(1813263-1813356)
chr3 (280-366)||(7877806-7877892)
[»] chr5 (5 HSPs)
chr5 (286-355)||(42440138-42440207)
chr5 (338-397)||(41015004-41015063)
chr5 (256-315)||(38516596-38516655)
chr5 (334-380)||(28734169-28734215)
chr5 (338-371)||(27731594-27731627)
[»] chr2 (7 HSPs)
chr2 (332-397)||(28044709-28044774)
chr2 (318-365)||(3110521-3110568)
chr2 (317-384)||(42173917-42173984)
chr2 (338-380)||(18569437-18569479)
chr2 (319-372)||(27705434-27705487)
chr2 (328-373)||(27711681-27711726)
chr2 (305-398)||(41631852-41631945)
[»] scaffold0153 (2 HSPs)
scaffold0153 (256-323)||(16116-16183)
scaffold0153 (256-323)||(31373-31440)
[»] scaffold0913 (1 HSPs)
scaffold0913 (330-380)||(1271-1321)
[»] scaffold0898 (1 HSPs)
scaffold0898 (330-380)||(4280-4330)
[»] scaffold1242 (1 HSPs)
scaffold1242 (328-373)||(919-964)


Alignment Details
Target: chr7 (Bit Score: 664; Significance: 0; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 664; E-Value: 0
Query Start/End: Original strand, 10 - 718
Target Start/End: Complemental strand, 32889324 - 32888616
Alignment:
Q  10 gcagagaacagcaaaagtaatcacaaatgtcaaaaccaattcagcagcagccccggtatgcaagtccactttcaaagaaggacccctgatcatgtgtttg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32889324 gcagagaacagcaaaagtaatcacaaatgtcaaaaccaattcagcagcagccccggtatgcaagtccactttcaaagaaggacccctgatcatgtgtttg 32889225  T
Q  110 tatttcggatgaatcaactccgcaattgccattgcaccacccgcagcaccgagtgcctacacaacgattatgcatgttttagggtaagcatctgatatac 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32889224 tatttcggatgaatcaactccgcaattgccattgcaccacccgcagcaccgagtgcctacacaacgattatgcatgttttagggtaagcatctgatatac 32889125  T
Q  210 gttgtttattttaaaaaattgatctggatccaattgagtttgaacaagtgttgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatg 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32889124 gttgtttattttaaaaaattgatctggatccaattgagtttgaacaagtgttgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatg 32889025  T
Q  310 ctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatcaccgaacaaaagtagcttgttcaaatcccactgtgcaa 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32889024 ctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatcactgaacaaaagtagcttgttcaaatcccactgtgcaa 32888925  T
Q  410 tattacatcacgtagctatagttgctatttgacaacaccgattgaacaaagtgacactgaattcttcaagttaaatttagcttgaatttcaaaattaact 509  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||    
T  32888924 tattacatcacgtagctatagttgctatttgacaacactgattgaacaaagtgaaactgaattcttcaagttaaatttagcttaaattccaaaattaact 32888825  T
Q  510 agagaaaataatcaatttagtctcatcaattcaaaatcctaaaatgtttctaaattgnnnnnnnttctccaatatatatcattatcattgcaatttgcaa 609  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  32888824 agagaaaataatcaatttagtctcatcaattcaaaatcctaaaatgtttctaaattgaaaaaaattctccaatatatatcattatcattgcaatttgcaa 32888725  T
Q  610 caatttcaggactaaactgactgattcagagtaatcgtaaaagaaaattttcaattttagagatcaaattcattaatttcagttggcctaattcaccaat 709  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32888724 caatttcaggactaaactgactgattcagagtaatcgtaaaagagaattttcaattttagagatcaaattcattaatttcagttggcctaattcaccaat 32888625  T
Q  710 gtcttcttt 718  Q
    |||||||||    
T  32888624 gtcttcttt 32888616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 256 - 372
Target Start/End: Original strand, 23117278 - 23117394
Alignment:
Q  256 agtgttgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttg 355  Q
    ||||||||||| ||| ||| ||||||||| |||| ||||||||||||| ||| |  |||| | |||||||| || ||| ||||||||| |||| | ||||    
T  23117278 agtgttgtcaattgcggattgcggaaaatagtggtttgttcaaattccgctacgtgacagtgctatagcgctgctatacccactatttcacaacattttg 23117377  T
Q  356 tactaaatagcatatca 372  Q
    | |||||||||||||||    
T  23117378 tgctaaatagcatatca 23117394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 30900036 - 30900140
Alignment:
Q  261 tgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtacta 360  Q
    |||||| ||||||| || |||||| |||| ||| ||||||||| |||||  ||||   |||||| |||| ||||||||||||| |||||| |||||||||    
T  30900036 tgtcaattgcagattgcagaaaatagtggtttgctcaaattccgctatgtaacagtactatagcaccgcgatagccactatttcacaatattttgtacta 30900135  T
Q  361 aatag 365  Q
    |||||    
T  30900136 aatag 30900140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 47822789 - 47822727
Alignment:
Q  301 tccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaat 363  Q
    ||||||| ||||||| |||||||||| || |||||||||| |||||||| | |||||||||||    
T  47822789 tccactacgctacagtgttatagcgctgctatagccactagttgacaattccttgtactaaat 47822727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 292 - 371
Target Start/End: Original strand, 7245903 - 7245983
Alignment:
Q  292 tgttcaaattccactatgct-acagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatc 371  Q
    |||| ||||||||||||||| |||| ||| ||| || |  |||||| ||||||||||| ||||||||||||||||| ||||    
T  7245903 tgttgaaattccactatgcttacagtgttgtagtgctgatatagccgctatttgacaacactttgtactaaatagcgtatc 7245983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 2219526 - 2219560
Alignment:
Q  338 ctatttgacaatactttgtactaaatagcatatca 372  Q
    ||||||||||||| |||||||||||||||||||||    
T  2219526 ctatttgacaatattttgtactaaatagcatatca 2219560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 278 - 364
Target Start/End: Original strand, 21173837 - 21173923
Alignment:
Q  278 ggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaata 364  Q
    ||||||| | || |||||||||||||||||||| || | ||||||  ||||  ||| || |||||| |||||| |||||||||||||    
T  21173837 ggaaaatagcggattgttcaaattccactatgcaactgtgttataatgccgttatatccgctatttcacaatattttgtactaaata 21173923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 336
Target Start/End: Original strand, 8558815 - 8558860
Alignment:
Q  291 ttgttcaaattccactatgctacagagttatagcgccgcaatagcc 336  Q
    ||||||||||||| ||||||||||  |||||||| |||||||||||    
T  8558815 ttgttcaaattccgctatgctacaatgttatagctccgcaatagcc 8558860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 327 - 356
Target Start/End: Original strand, 30644310 - 30644339
Alignment:
Q  327 cgcaatagccactatttgacaatactttgt 356  Q
    ||||||||||||||||||||||||||||||    
T  30644310 cgcaatagccactatttgacaatactttgt 30644339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 260 - 365
Target Start/End: Complemental strand, 42822723 - 42822618
Alignment:
Q  260 ttgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtact 359  Q
    ||||||| |||||||||||||||||    | |||||||||||||||||||| |||| | ||||||||||| ||||||||||||| ||| || ||||| ||    
T  42822723 ttgtcaattgcagatagcggaaaatatcagtttgttcaaattccactatgcaacagtgctatagcgccgctatagccactatttcacagtattttgtcct 42822624  T
Q  360 aaatag 365  Q
    ||||||    
T  42822623 aaatag 42822618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 369
Target Start/End: Original strand, 32616750 - 32616800
Alignment:
Q  319 tatagcgccgcaatagccactatttgacaatactttgtactaaatagcata 369  Q
    |||||| |||| ||||  |||||||||||||||||||||||||||||||||    
T  32616750 tatagcaccgctatagtaactatttgacaatactttgtactaaatagcata 32616800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 9714658 - 9714549
Alignment:
Q  286 gtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatcaccgaacaaaagta 385  Q
    |||| ||||| ||||||||||| |||| || | ||||| ||  |||| ||||||||| |||||||||||||| |||||||  |||| | |||||| | |     
T  9714658 gtggtttgtttaaattccactacgctatagggctatagagcttcaatcgccactattcgacaatactttgtattaaatagggtatcgcagaacaacaatg 9714559  T
Q  386 gcttgttcaa 395  Q
    ||||||||||    
T  9714558 gcttgttcaa 9714549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 10987829 - 10987794
Alignment:
Q  338 ctatttgacaatactttgtactaaatagcatatcac 373  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10987829 ctatttgacaaaactttgtactaaatagcatatcac 10987794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 2722194 - 2722232
Alignment:
Q  327 cgcaatagccactatttgacaatactttgtactaaatag 365  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  2722194 cgcaatagccactattcgacaatattttgtactaaatag 2722232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 7e-17; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 294 - 371
Target Start/End: Complemental strand, 34881817 - 34881740
Alignment:
Q  294 ttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatc 371  Q
    |||||||||||||||||||||  ||||||  |||||| ||| ||||||||||||| ||||||||||||||||| ||||    
T  34881817 ttcaaattccactatgctacaatgttataaagccgcagtagacactatttgacaagactttgtactaaatagcgtatc 34881740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 276 - 380
Target Start/End: Original strand, 1912445 - 1912549
Alignment:
Q  276 gcggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatcaccg 375  Q
    ||||||||| | || ||||||||||||| |||||| || | | ||||||| | | |||| | ||||||||||||| |||||||||||||| ||||| | |    
T  1912445 gcggaaaatagaggtttgttcaaattccgctatgcaacggtgctatagcgtcactatagtcgctatttgacaataatttgtactaaatagtatatcgcag 1912544  T
Q  376 aacaa 380  Q
    |||||    
T  1912545 aacaa 1912549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 33735436 - 33735495
Alignment:
Q  338 ctatttgacaatactttgtactaaatagcatatcaccgaacaaaagtagcttgttcaaat 397  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||| | ||||| ||||    
T  33735436 ctatttgacaacattttgtactaaatagcatatcacggaacaaaagtggtttgttaaaat 33735495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 366
Target Start/End: Complemental strand, 19391037 - 19390976
Alignment:
Q  305 ctatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagc 366  Q
    ||||||||||| | ||||||||| | ||| |  |||||||||||||||||||||||||||||    
T  19391037 ctatgctacagtgctatagcgccactataactgctatttgacaatactttgtactaaatagc 19390976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 380
Target Start/End: Complemental strand, 26373146 - 26373101
Alignment:
Q  335 ccactatttgacaatactttgtactaaatagcatatcaccgaacaa 380  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||    
T  26373146 ccactatttgacaacactttgtactaaatagcgtatcacagaacaa 26373101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 7932400 - 7932480
Alignment:
Q  331 atagccactatttgacaatactttgtactaaatagcatatcaccgaacaaaagtagcttgttcaaatcccactgtgcaata 411  Q
    |||| ||||||||||| | |||||||||||||| ||||||||  |||||| ||| | ||||| ||||||| || |||||||    
T  7932400 atagtcactatttgactaaactttgtactaaatcgcatatcaaggaacaatagttgtttgttaaaatcccgctatgcaata 7932480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 299 - 361
Target Start/End: Complemental strand, 264150 - 264088
Alignment:
Q  299 attccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaa 361  Q
    ||||| ||| ||||||| ||| |||| || |||||| | ||||||||||||||||||||||||    
T  264150 attccgctaagctacagggttgtagcacctcaatagtcgctatttgacaatactttgtactaa 264088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 7939978 - 7939908
Alignment:
Q  295 tcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatag 365  Q
    ||||||||| ||||||||||| | ||||| ||| | |||||| ||||||||||  |||||||||| |||||    
T  7939978 tcaaattccgctatgctacagtgctatagagccactatagccgctatttgacatcactttgtactgaatag 7939908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 9074090 - 9074164
Alignment:
Q  291 ttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatag 365  Q
    |||||||||||||| ||| | |||| | ||||||||||| |||||| |||||||| || | |||||| |||||||    
T  9074090 ttgttcaaattccattatacaacagtgctatagcgccgctatagcctctatttgataacattttgtagtaaatag 9074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 2730832 - 2730865
Alignment:
Q  331 atagccactatttgacaatactttgtactaaata 364  Q
    |||||||||||||||||| |||||||||||||||    
T  2730832 atagccactatttgacaacactttgtactaaata 2730865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 2733016 - 2732963
Alignment:
Q  318 ttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatc 371  Q
    |||||||||| | |||||  ||||||||||| | ||||||||||||||||||||    
T  2733016 ttatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatc 2732963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 28502959 - 28503020
Alignment:
Q  336 cactatttgacaatactttgtactaaatagcatatcaccgaacaaaagtagcttgttcaaat 397  Q
    ||||||||||||| ||||| |||||||| ||||||||| | ||||||| || ||||| ||||    
T  28502959 cactatttgacaacactttttactaaatcgcatatcactgcacaaaagcagtttgttaaaat 28503020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 29815364 - 29815425
Alignment:
Q  336 cactatttgacaatactttgtactaaatagcatatcaccgaacaaaagtagcttgttcaaat 397  Q
    ||||||||||||| ||||| |||||||| ||||||||| | ||||||| || ||||| ||||    
T  29815364 cactatttgacaacactttttactaaatcgcatatcactgcacaaaagcagtttgttaaaat 29815425  T

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Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 272 - 380
Target Start/End: Complemental strand, 207599 - 207489
Alignment:
Q  272 gatagcggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgc--aatagccactatttgacaatactttgtactaaatagcata 369  Q
    ||||||| |||||||  | ||||||||| |||  | ||||||||||||| ||  |||   ||||||||||||||||||||||||||||||||||||||||    
T  207599 gatagcgaaaaattgctgtttgttcaaactccgatgtgctacagagttacagtaccgtgaaatagccactatttgacaatactttgtactaaatagcata 207500  T
Q  370 tcaccgaacaa 380  Q
    || | ||||||    
T  207499 tcgcggaacaa 207489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 13298596 - 13298530
Alignment:
Q  331 atagccactatttgacaatactttgtactaaatagcatatcaccgaacaaaagtagcttgttcaaat 397  Q
    |||| ||||||||||||  |||||||||||||||||||||||| |||||| |||   ||||||||||    
T  13298596 atagtcactatttgacagcactttgtactaaatagcatatcacagaacaatagtgatttgttcaaat 13298530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 34417929 - 34417855
Alignment:
Q  291 ttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatag 365  Q
    |||||| |||| | ||||||||||  | |||||| ||||||||||  ||||||||||| ||||||||||||||||    
T  34417929 ttgttcgaatttcgctatgctacaatgatatagcaccgcaatagcggctatttgacaacactttgtactaaatag 34417855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 34417437 - 34417365
Alignment:
Q  294 ttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagc 366  Q
    |||||||||  ||||||||| | | |||||| || |||||||  ||||||||||| |||||||||||||||||    
T  34417437 ttcaaattctgctatgctaccgtgctatagcaccacaatagcggctatttgacaacactttgtactaaatagc 34417365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 30617188 - 30617310
Alignment:
Q  256 agtgttgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttg 355  Q
    ||||||||||| ||  ||| || |||||| | || ||||||||||||||||| || |||  | ||||||  ||| || |||||||||| |||||| ||||    
T  30617188 agtgttgtcaattggggattgcagaaaatagcggtttgttcaaattccactacgcaacaatgctatagcatcgctattgccactatttcacaatattttg 30617287  T
Q  356 tactaaatagcatatcaccgaaca 379  Q
    |||| |||||| |||||| |||||    
T  30617288 tact-aatagcgtatcacagaaca 30617310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 34581646 - 34581597
Alignment:
Q  331 atagccactatttgacaatactttgtactaaatagcatatcaccgaacaa 380  Q
    |||||| ||||||||||| | ||||||||||||||| |||||| ||||||    
T  34581646 atagccgctatttgacaacattttgtactaaatagcgtatcacggaacaa 34581597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 260 - 371
Target Start/End: Complemental strand, 44417935 - 44417824
Alignment:
Q  260 ttgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtact 359  Q
    ||||||||||| ||| ||||||||| || | || ||||||||||||||   ||||| | || |  |||||||||| ||||||||||||| |||||| |||    
T  44417935 ttgtcaactgcggatcgcggaaaatagtagtttcttcaaattccactacattacagggctacactgccgcaatagtcactatttgacaacactttgcact 44417836  T
Q  360 aaatagcatatc 371  Q
    ||||| ||||||    
T  44417835 aaataacatatc 44417824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 380
Target Start/End: Original strand, 6025952 - 6026013
Alignment:
Q  319 tatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatcaccgaacaa 380  Q
    |||||||| || |||||||||||||||||| | |||||||||||||||||||| | ||||||    
T  6025952 tatagcgctgctatagccactatttgacaacattttgtactaaatagcatatcgcggaacaa 6026013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 26161574 - 26161637
Alignment:
Q  306 tatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagcata 369  Q
    |||||||||  | |||||||| || |||||  ||||||||||||||||||||||||||||||||    
T  26161574 tatgctacaatgctatagcgcggctatagctgctatttgacaatactttgtactaaatagcata 26161637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 379
Target Start/End: Original strand, 15255160 - 15255260
Alignment:
Q  279 gaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatcaccgaac 378  Q
    |||||| |||| ||||| ||||||  |||||| |||  | ||||| ||||| ||||||||| ||| |||||| | || ||||||||||||||||| ||||    
T  15255160 gaaaatagtggtttgtttaaattctgctatgcaacattgctatagtgccgctatagccactgtttcacaatattatgcactaaatagcatatcacggaac 15255259  T
Q  379 a 379  Q
    |    
T  15255260 a 15255260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 330 - 365
Target Start/End: Original strand, 35742553 - 35742588
Alignment:
Q  330 aatagccactatttgacaatactttgtactaaatag 365  Q
    ||||||| ||||||||||||||||||||||||||||    
T  35742553 aatagccgctatttgacaatactttgtactaaatag 35742588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 331 - 365
Target Start/End: Complemental strand, 1118975 - 1118941
Alignment:
Q  331 atagccactatttgacaatactttgtactaaatag 365  Q
    |||||||||||||||||| ||||||||||||||||    
T  1118975 atagccactatttgacaacactttgtactaaatag 1118941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 256 - 397
Target Start/End: Complemental strand, 7991660 - 7991519
Alignment:
Q  256 agtgttgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttg 355  Q
    ||||||||||| |||||||  ||| |||| | || |||||  |||||||||| || |||  | ||||||||| |  ||||  |||||| |||||| | ||    
T  7991660 agtgttgtcaattgcagatcacggtaaatagcggtttgttataattccactaagcaacactgctatagcgccactctagctgctatttcacaatattatg 7991561  T
Q  356 tactaaatagcatatcaccgaacaaaagtagcttgttcaaat 397  Q
    |||||||| || |||||| |||||| ||| | ||||||||||    
T  7991560 tactaaatggcgtatcacggaacaatagtggtttgttcaaat 7991519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 367
Target Start/End: Original strand, 26161667 - 26161696
Alignment:
Q  338 ctatttgacaatactttgtactaaatagca 367  Q
    ||||||||||||||||||||||||||||||    
T  26161667 ctatttgacaatactttgtactaaatagca 26161696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 278 - 364
Target Start/End: Original strand, 8936695 - 8936781
Alignment:
Q  278 ggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaata 364  Q
    |||||||||  | |||||||||||||||| ||||  | || ||||||||||| ||||||| |||||||||| ||||||| |||||||    
T  8936695 ggaaaattgcagtttgttcaaattccactgtgctgtatagctatagcgccgctatagccattatttgacaacactttgttctaaata 8936781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 278 - 365
Target Start/End: Complemental strand, 3533612 - 3533525
Alignment:
Q  278 ggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatag 365  Q
    ||||||| |||| ||||||||| ||| ||| | | ||| | |||||||||||||||| | ||||||||||  ||||||||||||||||    
T  3533612 ggaaaatagtggtttgttcaaactcctctacgttgcagggctatagcgccgcaatagtccctatttgacagcactttgtactaaatag 3533525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 256 - 370
Target Start/End: Original strand, 50402572 - 50402686
Alignment:
Q  256 agtgttgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttg 355  Q
    ||||||||||| ||||||| ||  ||||| ||||| ||||||| |||  ||||| |  || | |||||||| || |||||  ||||||||||| |||||     
T  50402572 agtgttgtcaattgcagatcgcaaaaaatagtggcgtgttcaatttctgctatgttgtagtgctatagcgcagctatagctgctatttgacaacacttta 50402671  T
Q  356 tactaaatagcatat 370  Q
    |||||||||||||||    
T  50402672 tactaaatagcatat 50402686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 380
Target Start/End: Original strand, 28802757 - 28802816
Alignment:
Q  321 tagcgccgcaatagccactatttgacaatactttgtactaaatagcatatcaccgaacaa 380  Q
    |||||| || |||||||||||||||||| ||||| || ||||||||||||| | ||||||    
T  28802757 tagcgctgctatagccactatttgacaacactttatattaaatagcatatcgcggaacaa 28802816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 331 - 369
Target Start/End: Original strand, 1138436 - 1138474
Alignment:
Q  331 atagccactatttgacaatactttgtactaaatagcata 369  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  1138436 atagccactatttgacaactctttgtactaaatagcata 1138474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 311 - 405
Target Start/End: Complemental strand, 1813356 - 1813263
Alignment:
Q  311 tacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatcaccgaacaaaagtagcttgttcaaatcccactgt 405  Q
    ||||| ||||||| ||||| |||||||||||||||||| |||| || || ||| ||||||| | |||||| |||   |||||||||| |||||||    
T  1813356 tacagtgttatagtgccgctatagccactatttgacaacacttcgtgct-aatggcatatcgcggaacaatagtgatttgttcaaattccactgt 1813263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 280 - 366
Target Start/End: Complemental strand, 7877892 - 7877806
Alignment:
Q  280 aaaattgtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagc 366  Q
    |||||| ||| |||||||||||||||||  |||||| | ||||||| | |||||||| |||||||| || |   |||||||||||||    
T  7877892 aaaattatggtttgttcaaattccactacactacagtgctatagcgtcccaatagcctctatttgataacaaactgtactaaatagc 7877806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 42440207 - 42440138
Alignment:
Q  286 gtggcttgttcaaattccactatgctacagagttatagcgccgcaatagccactatttgacaatactttg 355  Q
    |||| ||||||||||||| ||||||||||| |||||||| | || |||||| ||||||||||| ||||||    
T  42440207 gtggtttgttcaaattccgctatgctacagtgttatagcactgctatagcctctatttgacaaaactttg 42440138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 41015004 - 41015063
Alignment:
Q  338 ctatttgacaatactttgtactaaatagcatatcaccgaacaaaagtagcttgttcaaat 397  Q
    |||| |||||| |||||||||||||||||||||||| |||||| || || ||||||||||    
T  41015004 ctatatgacaacactttgtactaaatagcatatcacggaacaatagcagtttgttcaaat 41015063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 38516655 - 38516596
Alignment:
Q  256 agtgttgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatgctacag 315  Q
    ||||||||||||||| ||||| ||||||| | || |||||||||||  ||||||||||||    
T  38516655 agtgttgtcaactgcggatagtggaaaatagcggtttgttcaaattttactatgctacag 38516596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 28734169 - 28734215
Alignment:
Q  334 gccactatttgacaatactttgtactaaatagcatatcaccgaacaa 380  Q
    |||||||||||||||  |||||||||||||||| |||||| ||||||    
T  28734169 gccactatttgacaactctttgtactaaatagcgtatcacggaacaa 28734215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 27731594 - 27731627
Alignment:
Q  338 ctatttgacaatactttgtactaaatagcatatc 371  Q
    ||||||||||| ||||||||||||||||||||||    
T  27731594 ctatttgacaaaactttgtactaaatagcatatc 27731627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 28044709 - 28044774
Alignment:
Q  332 tagccactatttgacaatactttgtactaaatagcatatcaccgaacaaaagtagcttgttcaaat 397  Q
    ||||||||||||||||| |||||||||||||| |||||||||  ||||| ||||| || |||||||    
T  28044709 tagccactatttgacaacactttgtactaaatcgcatatcacaaaacaatagtagtttattcaaat 28044774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 3110521 - 3110568
Alignment:
Q  318 ttatagcgccgcaatagccactatttgacaatactttgtactaaatag 365  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||    
T  3110521 ttatagcgccgctatagccactatttgacaacgctttgtactaaatag 3110568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 42173917 - 42173984
Alignment:
Q  317 gttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatcaccgaacaaaagt 384  Q
    |||| ||||||||||||||  ||||||||||| | |||||| |||||| | |||||| ||||||||||    
T  42173917 gttacagcgccgcaatagcagctatttgacaacaatttgtattaaataacgtatcacagaacaaaagt 42173984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 338 - 380
Target Start/End: Complemental strand, 18569479 - 18569437
Alignment:
Q  338 ctatttgacaatactttgtactaaatagcatatcaccgaacaa 380  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||    
T  18569479 ctatttgacaacactttatactaaatagcatatcacagaacaa 18569437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 27705487 - 27705434
Alignment:
Q  319 tatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatca 372  Q
    ||||| || |||||||||||| || ||||| ||||||||||||||| |||||||    
T  27705487 tatagtgctgcaatagccactgttggacaacactttgtactaaataacatatca 27705434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 27711726 - 27711681
Alignment:
Q  328 gcaatagccactatttgacaatactttgtactaaatagcatatcac 373  Q
    ||||||||||||||| ||||| |||| ||||| |||||||||||||    
T  27711726 gcaatagccactattggacaacacttcgtactgaatagcatatcac 27711681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 398
Target Start/End: Original strand, 41631852 - 41631945
Alignment:
Q  305 ctatgctacagagttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatcaccgaacaaaagtagcttgttcaaatc 398  Q
    ||||||||||| | ||||||  | | ||| |||||||| ||||| |||| |||||||||||||||||||  ||||| || |  |||||||||||    
T  41631852 ctatgctacagcgctatagcatcactataaccactattcgacaacacttcgtactaaatagcatatcacaaaacaatagcaatttgttcaaatc 41631945  T

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Target: scaffold0153 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 323
Target Start/End: Complemental strand, 16183 - 16116
Alignment:
Q  256 agtgttgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatgctacagagttatag 323  Q
    ||||||||||| || |||| | ||||||| |||| ||||||||||||| |||  ||||||||||||||    
T  16183 agtgttgtcaattgtagatggtggaaaatagtggattgttcaaattccgctacactacagagttatag 16116  T

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Target: scaffold0153; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 323
Target Start/End: Complemental strand, 31440 - 31373
Alignment:
Q  256 agtgttgtcaactgcagatagcggaaaattgtggcttgttcaaattccactatgctacagagttatag 323  Q
    ||||||||||| || |||| | ||||||| |||| ||||||||||||| |||  ||||||||||||||    
T  31440 agtgttgtcaattgtagatggtggaaaatagtggattgttcaaattccgctacactacagagttatag 31373  T

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Target: scaffold0913 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0913
Description:

Target: scaffold0913; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 1271 - 1321
Alignment:
Q  330 aatagccactatttgacaatactttgtactaaatagcatatcaccgaacaa 380  Q
    ||||||| ||||||||||| ||||||||||||||||  |||||| ||||||    
T  1271 aatagcctctatttgacaacactttgtactaaatagtgtatcacggaacaa 1321  T

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Target: scaffold0898 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0898
Description:

Target: scaffold0898; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 380
Target Start/End: Complemental strand, 4330 - 4280
Alignment:
Q  330 aatagccactatttgacaatactttgtactaaatagcatatcaccgaacaa 380  Q
    ||||||| ||||||||||| ||||||||||||||||  |||||| ||||||    
T  4330 aatagcctctatttgacaacactttgtactaaatagtgtatcacggaacaa 4280  T

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Target: scaffold1242 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1242
Description:

Target: scaffold1242; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 964 - 919
Alignment:
Q  328 gcaatagccactatttgacaatactttgtactaaatagcatatcac 373  Q
    ||||||||||||||| ||||| |||| ||||| |||||||||||||    
T  964 gcaatagccactattggacaacacttcgtactgaatagcatatcac 919  T

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