View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11008_low_21 (Length: 381)

Name: NF11008_low_21
Description: NF11008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11008_low_21
NF11008_low_21
[»] chr7 (51 HSPs)
chr7 (187-381)||(11685331-11685525)
chr7 (17-317)||(45464683-45464983)
chr7 (11-155)||(11684057-11684201)
chr7 (187-320)||(34784308-34784441)
chr7 (17-317)||(4321375-4321673)
chr7 (11-362)||(38614327-38614669)
chr7 (11-316)||(2168343-2168649)
chr7 (202-317)||(34692439-34692554)
chr7 (17-317)||(48302444-48302744)
chr7 (187-317)||(1547338-1547467)
chr7 (208-317)||(30108857-30108966)
chr7 (36-321)||(3690440-3690725)
chr7 (11-317)||(23954794-23955099)
chr7 (17-178)||(30109024-30109185)
chr7 (246-317)||(19712014-19712085)
chr7 (187-318)||(36766074-36766205)
chr7 (11-154)||(46995119-46995261)
chr7 (36-318)||(36756398-36756681)
chr7 (36-318)||(36762195-36762478)
chr7 (188-302)||(40785216-40785330)
chr7 (187-321)||(46810995-46811129)
chr7 (207-321)||(7403476-7403590)
chr7 (187-315)||(8421712-8421840)
chr7 (202-320)||(13036191-13036309)
chr7 (187-321)||(45360929-45361062)
chr7 (295-372)||(19712098-19712175)
chr7 (187-315)||(35342722-35342850)
chr7 (187-319)||(37791965-37792097)
chr7 (186-320)||(23904917-23905052)
chr7 (187-317)||(6605032-6605162)
chr7 (187-321)||(13169302-13169435)
chr7 (187-321)||(39857999-39858133)
chr7 (187-317)||(47384608-47384738)
chr7 (31-116)||(40785079-40785164)
chr7 (187-259)||(48850929-48851001)
chr7 (265-320)||(12904046-12904101)
chr7 (187-302)||(46994970-46995085)
chr7 (202-320)||(48311427-48311543)
chr7 (231-321)||(3921007-3921096)
chr7 (187-317)||(38549845-38549975)
chr7 (73-178)||(48705396-48705499)
chr7 (17-154)||(34692250-34692386)
chr7 (188-320)||(22155495-22155626)
chr7 (188-320)||(22211410-22211541)
chr7 (187-319)||(38472573-38472705)
chr7 (189-320)||(34775362-34775493)
chr7 (100-154)||(8421867-8421921)
chr7 (130-217)||(12903939-12904026)
chr7 (326-372)||(34784243-34784289)
chr7 (253-309)||(27956933-27956988)
chr7 (284-320)||(48227707-48227743)
[»] chr8 (47 HSPs)
chr8 (187-372)||(11031643-11031828)
chr8 (17-317)||(40019448-40019748)
chr8 (109-320)||(25356622-25356834)
chr8 (11-321)||(33369050-33369362)
chr8 (17-308)||(28432520-28432810)
chr8 (187-317)||(10269206-10269336)
chr8 (11-320)||(9876053-9876361)
chr8 (187-317)||(9186302-9186432)
chr8 (31-321)||(461467-461756)
chr8 (31-317)||(33158951-33159236)
chr8 (22-320)||(38881691-38881992)
chr8 (187-317)||(10268093-10268223)
chr8 (189-321)||(10770636-10770768)
chr8 (187-317)||(44620343-44620472)
chr8 (36-321)||(1321829-1322115)
chr8 (215-320)||(25373335-25373440)
chr8 (240-321)||(25705571-25705652)
chr8 (187-317)||(15684048-15684178)
chr8 (214-320)||(25402504-25402610)
chr8 (214-320)||(25707013-25707119)
chr8 (187-292)||(12515395-12515499)
chr8 (202-321)||(11719746-11719865)
chr8 (254-321)||(25370798-25370865)
chr8 (11-154)||(33748793-33748935)
chr8 (66-321)||(42895061-42895317)
chr8 (187-320)||(17807313-17807446)
chr8 (187-318)||(11790496-11790627)
chr8 (187-321)||(31823142-31823276)
chr8 (187-321)||(32823938-32824072)
chr8 (33-178)||(25371636-25371781)
chr8 (297-372)||(9186447-9186522)
chr8 (202-321)||(24527184-24527303)
chr8 (203-321)||(37525149-37525267)
chr8 (187-321)||(41041032-41041166)
chr8 (187-320)||(13484831-13484964)
chr8 (31-116)||(37525333-37525418)
chr8 (187-320)||(41824261-41824394)
chr8 (187-315)||(31199781-31199909)
chr8 (187-302)||(33748644-33748759)
chr8 (11-64)||(11719994-11720047)
chr8 (187-320)||(22273535-22273668)
chr8 (11-64)||(31822975-31823028)
chr8 (187-319)||(29693963-29694095)
chr8 (36-83)||(32823816-32823863)
chr8 (11-64)||(11790317-11790370)
chr8 (17-49)||(42895321-42895353)
chr8 (87-155)||(44620244-44620311)
[»] chr3 (39 HSPs)
chr3 (13-321)||(26448037-26448342)
chr3 (99-319)||(30501391-30501610)
chr3 (113-317)||(40962981-40963184)
chr3 (11-319)||(1847154-1847462)
chr3 (17-317)||(41945600-41945898)
chr3 (23-319)||(32842721-32843017)
chr3 (87-313)||(49494787-49495011)
chr3 (20-321)||(48634872-48635173)
chr3 (202-317)||(37865676-37865791)
chr3 (32-321)||(24382004-24382293)
chr3 (187-321)||(2975749-2975883)
chr3 (40-302)||(31885827-31886088)
chr3 (208-317)||(33051144-33051253)
chr3 (17-145)||(37886239-37886367)
chr3 (11-153)||(33112298-33112441)
chr3 (11-321)||(35861831-35862141)
chr3 (11-154)||(45897496-45897640)
chr3 (17-221)||(23775149-23775353)
chr3 (11-149)||(2975887-2976024)
chr3 (36-321)||(18429030-18429314)
chr3 (36-321)||(45255773-45256058)
chr3 (36-302)||(33851291-33851555)
chr3 (187-320)||(2378576-2378709)
chr3 (187-320)||(42282135-42282268)
chr3 (187-321)||(610850-610984)
chr3 (187-317)||(51686013-51686143)
chr3 (187-320)||(17516608-17516741)
chr3 (187-320)||(21350257-21350390)
chr3 (187-320)||(30598658-30598791)
chr3 (189-321)||(44268301-44268432)
chr3 (187-302)||(10380604-10380719)
chr3 (18-64)||(13466609-13466655)
chr3 (187-321)||(23887489-23887622)
chr3 (187-321)||(27897512-27897646)
chr3 (187-320)||(23875963-23876095)
chr3 (195-320)||(45897342-45897467)
chr3 (187-321)||(23291889-23292023)
chr3 (326-372)||(30501321-30501367)
chr3 (11-64)||(22218719-22218772)
[»] chr2 (29 HSPs)
chr2 (17-317)||(11021825-11022125)
chr2 (17-317)||(28247674-28247974)
chr2 (187-317)||(363354-363485)
chr2 (28-317)||(11313127-11313402)
chr2 (17-317)||(38149535-38149836)
chr2 (187-317)||(7744932-7745062)
chr2 (187-320)||(17948601-17948734)
chr2 (12-319)||(10715400-10715690)
chr2 (17-321)||(37418263-37418569)
chr2 (194-317)||(2359394-2359516)
chr2 (11-317)||(35575-35881)
chr2 (17-320)||(42880309-42880610)
chr2 (187-321)||(34400628-34400762)
chr2 (187-321)||(42517877-42518011)
chr2 (187-315)||(15373554-15373683)
chr2 (188-320)||(17697776-17697903)
chr2 (187-321)||(19907036-19907170)
chr2 (36-154)||(42002990-42003108)
chr2 (60-220)||(40150664-40150825)
chr2 (109-321)||(40152135-40152346)
chr2 (187-315)||(41708097-41708225)
chr2 (187-301)||(26581316-26581430)
chr2 (240-321)||(16377082-16377163)
chr2 (265-320)||(4047703-4047758)
chr2 (306-344)||(363509-363547)
chr2 (279-320)||(161813-161854)
chr2 (275-320)||(2359542-2359587)
chr2 (187-259)||(14387765-14387837)
chr2 (187-315)||(31474719-31474847)
[»] chr1 (26 HSPs)
chr1 (17-317)||(5784366-5784666)
chr1 (11-320)||(42558248-42558546)
chr1 (87-317)||(51123115-51123342)
chr1 (17-317)||(11152837-11153136)
chr1 (187-304)||(25172701-25172818)
chr1 (11-321)||(31803190-31803500)
chr1 (11-321)||(46637056-46637365)
chr1 (36-321)||(45379374-45379658)
chr1 (36-315)||(44158807-44159088)
chr1 (36-321)||(42135761-42136045)
chr1 (189-321)||(6576774-6576906)
chr1 (11-154)||(18183063-18183205)
chr1 (187-321)||(50554500-50554634)
chr1 (190-321)||(33679549-33679680)
chr1 (187-321)||(31237139-31237273)
chr1 (36-321)||(35478378-35478660)
chr1 (187-320)||(18058121-18058254)
chr1 (187-317)||(15105986-15106116)
chr1 (187-320)||(6817200-6817333)
chr1 (188-270)||(18180818-18180900)
chr1 (187-320)||(45045232-45045365)
chr1 (187-302)||(27952167-27952282)
chr1 (187-321)||(2870712-2870845)
chr1 (187-321)||(3012175-3012309)
chr1 (36-154)||(33679696-33679814)
chr1 (279-317)||(33599542-33599580)
[»] chr4 (37 HSPs)
chr4 (17-317)||(39922506-39922806)
chr4 (17-317)||(39084651-39084951)
chr4 (17-317)||(39190318-39190618)
chr4 (17-317)||(42879576-42879876)
chr4 (17-317)||(43778681-43778979)
chr4 (17-317)||(5485551-5485851)
chr4 (18-317)||(44993100-44993399)
chr4 (187-316)||(13438146-13438275)
chr4 (187-317)||(230740-230869)
chr4 (190-306)||(25994781-25994897)
chr4 (17-317)||(32653130-32653430)
chr4 (11-321)||(4519959-4520270)
chr4 (188-260)||(39294553-39294625)
chr4 (36-302)||(44556917-44557183)
chr4 (37-321)||(27626246-27626530)
chr4 (207-319)||(28100865-28100977)
chr4 (31-320)||(51041027-51041314)
chr4 (187-319)||(13449984-13450107)
chr4 (187-321)||(2691684-2691818)
chr4 (187-320)||(20820290-20820423)
chr4 (294-370)||(39294645-39294721)
chr4 (187-315)||(47942413-47942541)
chr4 (187-320)||(54387537-54387670)
chr4 (43-321)||(35997284-35997568)
chr4 (18-125)||(10544498-10544605)
chr4 (187-302)||(44793243-44793358)
chr4 (187-321)||(11254378-11254512)
chr4 (230-315)||(10544693-10544778)
chr4 (240-321)||(26397635-26397715)
chr4 (187-320)||(49524394-49524527)
chr4 (187-321)||(35402069-35402202)
chr4 (11-51)||(27385940-27385980)
chr4 (294-372)||(230650-230728)
chr4 (121-178)||(25994708-25994765)
chr4 (11-68)||(28101122-28101179)
chr4 (283-320)||(42982211-42982248)
chr4 (284-320)||(20494146-20494182)
[»] chr6 (12 HSPs)
chr6 (17-317)||(17950853-17951152)
chr6 (17-317)||(35174674-35174974)
chr6 (23-319)||(17936042-17936339)
chr6 (17-317)||(34344824-34345123)
chr6 (189-317)||(4289710-4289838)
chr6 (195-368)||(31210129-31210313)
chr6 (187-321)||(33277101-33277234)
chr6 (187-320)||(7371453-7371586)
chr6 (195-319)||(30639903-30640027)
chr6 (202-321)||(11356803-11356922)
chr6 (240-317)||(33267342-33267419)
chr6 (231-307)||(14337985-14338061)
[»] chr5 (33 HSPs)
chr5 (187-321)||(1344478-1344612)
chr5 (17-317)||(42619581-42619875)
chr5 (192-317)||(24497749-24497874)
chr5 (11-321)||(18726853-18727164)
chr5 (19-321)||(38176923-38177225)
chr5 (19-321)||(38204147-38204449)
chr5 (11-317)||(35291343-35291644)
chr5 (11-302)||(40330004-40330296)
chr5 (187-319)||(1343482-1343614)
chr5 (11-321)||(32089411-32089725)
chr5 (87-317)||(27350095-27350322)
chr5 (11-154)||(43317186-43317329)
chr5 (17-302)||(32836186-32836470)
chr5 (87-321)||(6116465-6116700)
chr5 (11-155)||(18341593-18341737)
chr5 (187-321)||(18623765-18623899)
chr5 (187-321)||(32134556-32134690)
chr5 (187-320)||(34328466-34328600)
chr5 (39-302)||(35400226-35400489)
chr5 (187-320)||(12738337-12738470)
chr5 (187-320)||(12801160-12801293)
chr5 (187-320)||(27077123-27077256)
chr5 (187-320)||(33257426-33257559)
chr5 (11-58)||(33257262-33257309)
chr5 (310-372)||(24497885-24497947)
chr5 (190-308)||(41494167-41494285)
chr5 (240-321)||(30464263-30464344)
chr5 (240-320)||(28035772-28035852)
chr5 (17-64)||(27076963-27077010)
chr5 (231-321)||(28821770-28821860)
chr5 (283-317)||(29620495-29620529)
chr5 (283-319)||(8541036-8541072)
chr5 (240-320)||(19998149-19998229)
[»] scaffold0006 (1 HSPs)
scaffold0006 (87-315)||(37856-38082)
[»] scaffold0070 (1 HSPs)
scaffold0070 (189-321)||(57669-57802)
[»] scaffold1041 (2 HSPs)
scaffold1041 (254-321)||(2643-2710)
scaffold1041 (254-321)||(2356-2423)
[»] scaffold0722 (1 HSPs)
scaffold0722 (192-321)||(4446-4574)
[»] scaffold0564 (1 HSPs)
scaffold0564 (187-320)||(9533-9666)
[»] scaffold0345 (1 HSPs)
scaffold0345 (202-321)||(1164-1283)


Alignment Details
Target: chr7 (Bit Score: 151; Significance: 8e-80; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 187 - 381
Target Start/End: Original strand, 11685331 - 11685525
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  11685331 attaggttttgaagctttttgaattggtgaagaacgttacctctaattattgaaagaaattttggagattttggagtgtagattacagattgtaaaatta 11685430  T
Q  287 gggttccaattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccac 381  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  11685431 gggttccaattttatatatttgggggagaaagagcaaagcattttctacaaatcaatcaatttgatccttggaaattttggtcgctatcgaccac 11685525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 45464683 - 45464983
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  45464683 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 45464782  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| | |||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  45464783 tagattcaatttcaacagtattgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttgggga 45464882  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  |||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  45464883 agaacgtgacccttaattattgaaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttgaggaagaa 45464982  T
Q  317 a 317  Q
    |    
T  45464983 a 45464983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 11684057 - 11684201
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgc-ttttgcccttacacccacccctc 109  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||    
T  11684057 ggacaccaacattcaagtactctcacatcaccattaaacatggagcttaaagatgaagctcgactttcataattgctttttgcccttaca-ccacccctc 11684155  T
Q  110 atcatttcagattcaaattgaacaattttgcttgaagaaattttgg 155  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  11684156 atcatttcggattcaaattgaacaattttgcttgaagaaattttgg 11684201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 34784441 - 34784308
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||| | |||||||||  |||||||||||||||||| | ||||||||||||    
T  34784441 attagggtttggagttttttgaattggggaagaacgttaccactaattattgacataaattttggagattttggagtgtagattaaagattgtaaaatta 34784342  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    |||||||||||||||||||||| |||||||||||    
T  34784341 gggttccaattttatatatttggggaagaaagag 34784308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 4321673 - 4321375
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||| ||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| ||||||||    
T  4321673 caacattcaagcactctcacatcaacattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccc-catcattt 4321575  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || || | |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  4321574 tagattcaatttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgcaattttttgatttgggga 4321476  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| ||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||    
T  4321475 agaacgtgacccttaattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaa 4321376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 11 - 362
Target Start/End: Original strand, 38614327 - 38614669
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||| |||||||||||||||||||||| || |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||    
T  38614327 ggacaccaacatttaagcactctcacatcaccattagacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccacccc-ca 38614425  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 210  Q
    ||||||||||||||| || || | |||||||| |||||||||||  ||| |||  |||| ||||||||        |||||||||||||| |||||||||    
T  38614426 tcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacgaaaaaattagggtttgaagttttttgaat 38614525  T
Q  211 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 310  Q
     || |||||||   |||||| ||||||| | ||||||||||  ||||       |||||| || |||||  ||||||| ||||||||||||| |  || |    
T  38614526 cggagaagaactggaccacttattattggaggaaattttggtgattt-------tagattgcagattgtgtaattaggattccaattttatacagctggg 38614618  T
Q  311 gaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaat 362  Q
    ||||||||  |||| |||||||| ||||||||| |||||  ||||| |||||    
T  38614619 gaagaaag-ccaaaacattttctgcaaatcaatcaatttagtcctttgaaat 38614669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 316
Target Start/End: Original strand, 2168343 - 2168649
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttg--cccttacacccacccct 108  Q
    ||||| |||||||  |||||||| ||||||||||||||| |||||||| ||||||||||| ||||||||||| |  ||||   ||| ||  ||||||||     
T  2168343 ggacaccaacatttgagcactctgacatcaccattaaacttggagcttgaagataaagctcgactttcataactattttttttcccatattcccacccc- 2168441  T
Q  109 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 208  Q
    |||||||| |||||||| || || | |||||||| |||||||||||  ||| |||  |||| ||||||||        |||||||||||||| |||||||    
T  2168442 catcattttagattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacgaaaaaattagggtttgaagttttttga 2168541  T
Q  209 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 308  Q
    ||||| |||||||   || ||| ||||||| | ||||||||||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | |||    
T  2168542 attggagaagaactggactacttattattggaggaaattttggtgattttagagtgtagattgcagattgtgtaattagggttacaattttatacaattg 2168641  T
Q  309 aggaagaa 316  Q
     |||||||    
T  2168642 gggaagaa 2168649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 202 - 317
Target Start/End: Original strand, 34692439 - 34692554
Alignment:
Q  202 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 301  Q
    ||||||| |||||||||||||| |||||||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||    
T  34692439 tttttgatttggggaagaacgtgaccactaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttat 34692538  T
Q  302 atatttgaggaagaaa 317  Q
    ||||||| ||||||||    
T  34692539 atatttggggaagaaa 34692554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 48302744 - 48302444
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    ||||||||||||||||||||||||||||||||||||||   | ||||| || ||||||||| |||  |  |||||||| ||   |||||||  |||||||    
T  48302744 caacattcaagcactctcacatcaccattaaacatggaagatgaagatgaaacttgactttgatagctctttttgcccatatgaccacccccaatcattt 48302645  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
      | ||||| || |||| |||||||||||  |||||||  ||| |||  ||||  |||||||        ||||||||||| |  ||||||| |||||||    
T  48302644 ttgtttcaatttcaacagttttgcttgaatgaattttgaagattttggttttcatattcaattaaaaaaaattagggtttgcaattttttgatttgggga 48302545  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| ||   ||||||||| ||| || |||||  ||||||||||||||| |||| ||||||||||||| ||| |||||||||||||||| |||||||    
T  48302544 agaacgtgactcttaattattggaagcaaatttggagattttggagtgtagaatacacattgtaaaattagagtttcaattttatatatttggggaagaa 48302445  T
Q  317 a 317  Q
    |    
T  48302444 a 48302444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 1547338 - 1547467
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||| | | ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| | ||||||||||||    
T  1547338 attagggtttgaggttatttcaatcggggaagaacgttaccactaattattgaaagaa-ttttgggaattttagagtgtggattaaagattgtaaaatta 1547436  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    ||||| |||||||||| ||||| ||||||||    
T  1547437 gggtttcaattttatacatttggggaagaaa 1547467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 30108966 - 30108857
Alignment:
Q  208 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 307  Q
    |||||||||||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30108966 aattggggaagaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatattt 30108867  T
Q  308 gaggaagaaa 317  Q
    | ||||||||    
T  30108866 ggggaagaaa 30108857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 321
Target Start/End: Complemental strand, 3690725 - 3690440
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    |||||||| ||||| |||||||| ||||| |||||||||||||||||    |||| ||| ||  ||||||||   ||||||||||||||| || || | |    
T  3690725 catcaccactaaacttggagcttgaagatgaagcttgactttcataacaattttttcccatattcccaccccatttcatttcagattcaatttcaatagt 3690626  T
Q  136 tttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 235  Q
    ||||||| |||||||||||  ||| |||  |||| ||||||||        |||||||||| ||| ||||||||||||||||||||   |||||| ||||    
T  3690625 tttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaattagggtttcaagttttttgaattggggaagaactggaccacttatta 3690526  T
Q  236 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  3690525 ttggaggaaatttaggtgattttagaatgtagattgcaaattgtgtaattagggttccaattttatacaattggggaagacagagc 3690440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 317
Target Start/End: Original strand, 23954794 - 23955099
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||||| ||| ||||||||||| |||||||  ||||| ||||| || |||||||| || ||||  || ||  | |||||| |     
T  23954794 ggacaccaacattcaagcactctaacaacaccattaaacttggagctcgaagatgaagctcgattttcataactgtttttttccatattctcacccc-cg 23954892  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 210  Q
    |||||||||||||||  | || | |||||||| |||||||||||  ||| ||   |||| ||||||||        |||||||||||||| || ||||||    
T  23954893 tcatttcagattcaatgtcaatagttttgcttcaagaaattttgaggattttagctttcagattcaataccaagaaattagggtttgaagtttgttgaat 23954992  T
Q  211 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 310  Q
    ||| |||||||   |||||| ||||||| | |||||||| |  ||||| ||||||||| |  | |||||  ||||||||||||||||||||| | ||| |    
T  23954993 tggcgaagaactggaccacttattattggaggaaatttttgttattttagagtgtagactgaagattgtgtaattagggttccaattttatacaattggg 23955092  T
Q  311 gaagaaa 317  Q
    |||||||    
T  23955093 gaagaaa 23955099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 30109185 - 30109024
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| ||| ||  |||||||| ||   ||||| | ||||||||    
T  30109185 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagttctttttgcccatatgaccacctcccatcattt 30109086  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaat 178  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||| |||| ||||||||    
T  30109085 tagattcaatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaat 30109024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 19712014 - 19712085
Alignment:
Q  246 ttttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 317  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19712014 ttttggaaattttggagtgtagattacagattgtaaaattagggttccaattttatatatttggggaagaaa 19712085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 318
Target Start/End: Original strand, 36766074 - 36766205
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||| |||||    
T  36766074 attagggtttgaagttttttgaattggggaagaactaaaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtataatta 36766173  T
Q  287 gggttccaattttatatatttgaggaagaaag 318  Q
    ||||| |||||||||| | ||| |||||||||    
T  36766174 gggtttcaattttatacaattggggaagaaag 36766205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 46995261 - 46995119
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | || |  || ||  |||||||| ||    
T  46995261 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccg-ttatttccatattcccaccccaca 46995163  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttg 154  Q
    ||||||||||||||| || || | |||||||| |||||||||||    
T  46995162 tcatttcagattcaatttcaatagttttgcttcaagaaattttg 46995119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 318
Target Start/End: Original strand, 36756398 - 36756681
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  36756398 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccccatcattttggattttatttcaatagt 36756497  T
Q  136 tttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 234  Q
    ||||||| |||||||||||  ||  |||  |||  ||||||||        | ||||||||||||| ||||||||||||||||||||   |||||| |||    
T  36756498 tttgcttcaagaaattttgaggaatttggttttatgattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactaaaccacttatt 36756597  T
Q  235 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 318  Q
    |||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||    
T  36756598 attggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaag 36756681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 36 - 318
Target Start/End: Original strand, 36762195 - 36762478
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  36762195 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccccatcattttggattttatttcaatagt 36762294  T
Q  136 tttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 234  Q
    ||||||| |||||||||||  ||  |||  |||  ||||||||        | ||||||||||||| ||||||||||||||||||||   |||||| |||    
T  36762295 tttgcttcaagaaattttgaggaatttggttttatgattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactaaaccacttatt 36762394  T
Q  235 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 318  Q
    |||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||    
T  36762395 attggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaag 36762478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 188 - 302
Target Start/End: Original strand, 40785216 - 40785330
Alignment:
Q  188 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 287  Q
    ||||||||||||| ||||||||||||||||||||   |||||| |||| || | ||||||||||  ||||||||||||||||| || |||||| ||||||    
T  40785216 ttagggtttgaagatttttgaattggggaagaactggaccacttattagtggaggaaattttggtgattttggagtgtagattgcagattgtacaattag 40785315  T
Q  288 ggttccaattttata 302  Q
    |||| ||||||||||    
T  40785316 ggttacaattttata 40785330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 46811129 - 46810995
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || | |||  |||||    
T  46811129 attagggtttgaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagactgtgtaatta 46811030  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    | |||||||||||||| | ||| | ||||||||||    
T  46811029 gagttccaattttatacaattgggaaagaaagagc 46810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 7403476 - 7403590
Alignment:
Q  207 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 306  Q
    ||||||| ||||||||||  ||  ||||| || ||||||| ||||  |||||||| | ||||||||||||||||||| |||||||||||||| ||| |||    
T  7403476 gaattggagaagaacgttgtcatcaattaatggaagaaatcttggagattttggactctagattacatattgtaaaactagggttccaatttaatagatt 7403575  T
Q  307 tgaggaagaaagagc 321  Q
    || | ||||||||||    
T  7403576 tgggaaagaaagagc 7403590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 315
Target Start/End: Complemental strand, 8421840 - 8421712
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  8421840 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 8421741  T
Q  287 gggttccaattttatatatttgaggaaga 315  Q
    ||||| |||||||||||| ||| ||||||    
T  8421740 gggtttcaattttatataattggggaaga 8421712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 13036191 - 13036309
Alignment:
Q  202 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 301  Q
    |||||||||||||||||||| ||  ||  ||||| || ||||||||||||| |||||| | | ||| | ||| ||| |||||| ||| |||||| |||||    
T  13036191 tttttgaattggggaagaactttgtcatcaattaatggaagaaattttggggattttgaactctaggtgacaaattataaaataaggattccaaatttat 13036290  T
Q  302 atatttgaggaagaaagag 320  Q
    ||||||| |||||||||||    
T  13036291 atatttggggaagaaagag 13036309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 321
Target Start/End: Original strand, 45360929 - 45361062
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  |||| ||| ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  45360929 attagggttttaagttttttgaattggggaagaacattgacatcaattcttgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 45361028  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||| ||||||| ||||||||||||    
T  45361029 gggttccaaattta-atatttggggaagaaagagc 45361062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 19712098 - 19712175
Alignment:
Q  295 attttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcact 372  Q
    |||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||  ||||| ||| || ||||||||    
T  19712098 attttatatatttggggaagaaagggcaaaacattttcaacaaatcaattaatttagtcctttgaagttatggtcact 19712175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 315
Target Start/End: Complemental strand, 35342850 - 35342722
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| ||||||||||||||||||||   || ||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  35342850 attagggttttaagttttttgaattggggaagaactggactacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 35342751  T
Q  287 gggttccaattttatatatttgaggaaga 315  Q
    |||||||||||||||| | ||| ||||||    
T  35342750 gggttccaattttatacaattggggaaga 35342722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 319
Target Start/End: Complemental strand, 37792097 - 37791965
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| || |||  | ||   | |||||||||| || |||||| | | ||| | ||| ||| ||| ||||    
T  37792097 attagggttttaagttttttgaattggggaagaactttgccataagttcagggaagaaatttttgggattttgaactctaggtgacaaattataacatta 37791998  T
Q  287 gggttccaattttatatatttgaggaagaaaga 319  Q
    ||||||||| |||||||||||| ||||||||||    
T  37791997 gggttccaaatttatatatttggggaagaaaga 37791965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 320
Target Start/End: Complemental strand, 23905052 - 23904917
Alignment:
Q  186 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 285  Q
    ||||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| |||    
T  23905052 tattagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctagttgacaaattataacatt 23904953  T
Q  286 agggttccaattttatatattt-gaggaagaaagag 320  Q
    |||||||||| ||||||||||| | |||||||||||    
T  23904952 agggttccaaatttatatatttgggggaagaaagag 23904917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 6605032 - 6605162
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||| ||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  6605032 attagggttttaagttttttgaattggggaaaaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtaacaaattataacatta 6605131  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    ||||||||| |||||||||||| ||||||||    
T  6605132 gggttccaaatttatatatttggggaagaaa 6605162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 321
Target Start/End: Original strand, 13169302 - 13169435
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  13169302 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 13169401  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||| ||||| |||||||||||| ||||||||||||    
T  13169402 ggg-tccaaatttatatatttggggaagaaagagc 13169435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 39858133 - 39857999
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||| ||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  39858133 attagggttttaagttttttgaattggtgaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 39858034  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||| | |||||||||||| ||||||||||||    
T  39858033 gggttccgaatttatatatttggggaagaaagagc 39857999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 47384738 - 47384608
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||| |||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  47384738 attagggttttaagttttttgaattggggaagaactttgacatcaattcatggaagacattttggggattttgaactctaggtgacaaattataacatta 47384639  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    ||||||||| |||||||| ||| ||||||||    
T  47384638 gggttccaaatttatataattggggaagaaa 47384608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 40785079 - 40785164
Alignment:
Q  31 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    ||||||||||||||||||| |||||||| ||||  ||||| |||||||||||||| ||||  || ||  |||||||| ||||||||    
T  40785079 tctcacatcaccattaaacttggagcttgaagaagaagctcgactttcataattgtttttttccatattcccaccccccatcattt 40785164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 48851001 - 48850929
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttg 259  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||| || ||||||||||||||||||||    
T  48851001 attagggttttaagttttttgaattggggaagaactttggcatcaattaatggaagaaattttgggaattttg 48850929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 12904046 - 12904101
Alignment:
Q  265 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||  ||||||||||    
T  12904046 tagattacagattgtaaaattagggttcaaattttatagatttggagaagaaagag 12904101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 46995085 - 46994970
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    ||||||||||| || |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  46995085 attagggtttggagttttttgaattggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 46994986  T
Q  287 gggttccaattttata 302  Q
     |||||||||||||||    
T  46994985 aggttccaattttata 46994970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 48311427 - 48311543
Alignment:
Q  202 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 301  Q
    |||||||||||||||||||| ||  ||  ||||| |||||||||||||| | |||||| | | ||| | ||| ||| |||||||| ||||||||   |||    
T  48311427 tttttgaattggggaagaactttgtcatcaattaatgaaagaaattttgaggattttgaattctaggtgacaaattataaaattaaggttccaa--atat 48311524  T
Q  302 atatttgaggaagaaagag 320  Q
    ||||||| |||||||||||    
T  48311525 atatttggggaagaaagag 48311543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 321
Target Start/End: Complemental strand, 3921096 - 3921007
Alignment:
Q  231 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||| || ||||||||||||| |||||| | | ||||||||| |||||| ||||| |||| |||||||||| ||| | ||||||||||||    
T  3921096 aattaatggaagaaattttggggattttgtactatagattacagattgtagaatta-ggtttcaattttatagattcggggaagaaagagc 3921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 38549975 - 38549845
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||| ||| ||| |||||||||||||||||||| ||   |  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  38549975 attaggattttaagttttttgaattggggaagaactttggtatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacatta 38549876  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    ||||||||| |||||||||||  ||||||||    
T  38549875 gggttccaaatttatatatttagggaagaaa 38549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 48705396 - 48705499
Alignment:
Q  73 actttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcgga 172  Q
    ||||| ||||||  |||||||| ||  ||||||||  |||||||| ||||||| ||||||| ||||||||||||||||| ||| |||  ||  |||||||    
T  48705396 actttgataattctttttgcccatatgcccacccc--atcatttcggattcaatttgaacagttttgcttgaagaaattatggagattctggttttcgga 48705493  T
Q  173 ttcaat 178  Q
    ||||||    
T  48705494 ttcaat 48705499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 34692250 - 34692386
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    ||||||||||||| ||||||||||| |||||||||| ||  | ||||| |||||||||||| |||  |  |||||||| ||   | ||||| ||||||||    
T  34692250 caacattcaagcattctcacatcactattaaacatgtaggatgaagatgaagcttgactttgatagctctttttgcccatatgactacccc-catcattt 34692348  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttg 154  Q
     |||||||| || || | |||||||||||  |||||||    
T  34692349 tagattcaatttcaatagttttgcttgaatgaattttg 34692386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 320
Target Start/End: Original strand, 22155495 - 22155626
Alignment:
Q  188 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 287  Q
    ||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | ||| ||| ||| ||||     
T  22155495 ttagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaagtgacaaattataacattaa 22155594  T
Q  288 ggttccaattttatatatttgaggaagaaagag 320  Q
    |||||||| |||||||||||| |||||||||||    
T  22155595 ggttccaa-tttatatatttggggaagaaagag 22155626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 320
Target Start/End: Original strand, 22211410 - 22211541
Alignment:
Q  188 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 287  Q
    ||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | ||| ||| ||| ||||     
T  22211410 ttagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaagtgacaaattataacattaa 22211509  T
Q  288 ggttccaattttatatatttgaggaagaaagag 320  Q
    |||||||| |||||||||||| |||||||||||    
T  22211510 ggttccaa-tttatatatttggggaagaaagag 22211541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 319
Target Start/End: Complemental strand, 38472705 - 38472573
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||  ||| |||||| | | ||| | ||| ||| ||| ||||    
T  38472705 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaattcgggggattttgaactctaggtgacaaattataacatta 38472606  T
Q  287 gggttccaattttatatatttgaggaagaaaga 319  Q
     |||||||| |||||||||||| |||| |||||    
T  38472605 aggttccaaatttatatatttggggaataaaga 38472573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 320
Target Start/End: Complemental strand, 34775493 - 34775362
Alignment:
Q  189 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 288  Q
    |||||||| ||| ||| |||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||    
T  34775493 tagggttttaagttttctgaattggggaagaacattgacatcaattcatgtaagaaatttgggagattttgaactctaggtaacaaattataacattagg 34775394  T
Q  289 gttccaattttatatatttgaggaagaaagag 320  Q
    ||||||| |||||||||||  |||||||||||    
T  34775393 gttccaaatttatatatttagggaagaaagag 34775362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 8421921 - 8421867
Alignment:
Q  100 cccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttg 154  Q
    |||||||||||||||||||||||||| || ||   |||||||| |||||||||||    
T  8421921 cccacccctcatcatttcagattcaatttcaagcgttttgcttcaagaaattttg 8421867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 12903939 - 12904026
Alignment:
Q  130 aacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa 217  Q
    |||||||||||||||||||||||||| ||  ||| ||||||| ||||||        |||||||||||| | |||| |||||||||||    
T  12903939 aacaattttgcttgaagaaattttggagactttggatttcgggttcaataaaaacaaattagggtttgacgtttttagaattggggaa 12904026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 34784289 - 34784243
Alignment:
Q  326 cattttctacaaatcaattaatttgatccttggaaattttggtcact 372  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  34784289 cattttctgcaaatcaatcaatttcgtccttggaaattttggtcact 34784243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 27956933 - 27956988
Alignment:
Q  253 aattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 309  Q
    |||||||||||||||||| || |||||  |||||| ||||||| |||||||||||||    
T  27956933 aattttggagtgtagattgcagattgtgtaattagagttccaa-tttatatatttga 27956988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 48227707 - 48227743
Alignment:
Q  284 ttagggttccaattttatatatttgaggaagaaagag 320  Q
    |||||||||||| |||||||||||| |||||||||||    
T  48227707 ttagggttccaaatttatatatttggggaagaaagag 48227743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 7e-65; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 187 - 372
Target Start/End: Complemental strand, 11031828 - 11031643
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||    
T  11031828 attagggtttgaagttttttgaattagggaagaacgttaccactaattattggaagaaattttggggattttggagtgtagattatagattgtaaaatta 11031729  T
Q  287 gggttccaattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcact 372  Q
    || ||||||||||||||||||| |||||||| |||||| |||||| | ||||||||| |||||  |||||||||||||||||||||    
T  11031728 ggcttccaattttatatatttggggaagaaaaagcaaaacattttatgcaaatcaataaatttagtccttggaaattttggtcact 11031643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 40019748 - 40019448
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  40019748 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 40019649  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  40019648 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 40019549  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  40019548 agaacgtgacccttaattattggaagaaaatttggagattttggggtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 40019449  T
Q  317 a 317  Q
    |    
T  40019448 a 40019448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 109 - 320
Target Start/End: Complemental strand, 25356834 - 25356622
Alignment:
Q  109 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttg 207  Q
    ||||||||| ||||||| || || | |||||||| |||||||||||| ||| ||| ||||| ||||||||        | ||||||||||||| ||||||    
T  25356834 catcatttctgattcaatttcaatagttttgcttcaagaaattttggggattttggatttcagattcaataaaaaagaaattagggtttgaagttttttg 25356735  T
Q  208 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 307  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||    
T  25356734 aattggggaagaacgttaccacttattattggaagaaattttggtgattttggagtgtagattacatatagtataattagagttccagttttatatattt 25356635  T
Q  308 gaggaagaaagag 320  Q
    | |||||||||||    
T  25356634 ggggaagaaagag 25356622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 321
Target Start/End: Complemental strand, 33369362 - 33369050
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| |||||||||||| |||||||||||||||||||  |||||||| |||||||||||  ||||||||||  | |||| | | ||  |||||  | ||    
T  33369362 ggacaccaacattcaagcgctctcacatcaccattaaatttggagcttgaagataaagctcaactttcataaccgttttttctcatattcccacgtccca 33369263  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnnta--ttagggtttgaagctttttga 208  Q
    ||||||||||||||| || || | |||||||| ||||| ||||||  || |||  |||| ||||||||        |  || |||||||||| |||||||    
T  33369262 tcatttcagattcaatttcaatagttttgcttcaagaagttttgggaattttggctttcagattcaataagaaaaaaaattcgggtttgaagttttttga 33369163  T
Q  209 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 308  Q
    |||||||||||||   |||||| ||||||| ||||| ||||||  ||||||||||||||||| || ||| |  |||||||||||||||||||||||||||    
T  33369162 attggggaagaactggaccacttattattggaagaagttttggtgattttggagtgtagattgcagattatgtaattagggttccaattttatatatttg 33369063  T
Q  309 aggaagaaagagc 321  Q
     ||||||||||||    
T  33369062 gggaagaaagagc 33369050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 17 - 308
Target Start/End: Complemental strand, 28432810 - 28432520
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| || |||||||||  ||  |  |||||||| ||   ||||||| ||||||||    
T  28432810 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaaacttgactttggtagctctttttgcccatatgaccacccc-catcattt 28432712  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || ||||  ||||||||||  |||||||  ||| |||  |||| ||||||||        | || |||||| |  ||||||| |||||||    
T  28432711 tagattcaatttcaacagatttgcttgaatgaattttgtagattttggttttcagattcaattaaaaaaaaatacggtttgcaattttttgatttgggga 28432612  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 308  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28432611 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttg 28432520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 10269206 - 10269336
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||  | ||||||||||||    
T  10269206 attagcgtttgaagttttttgaattggggaagaacgttaccactaattattggaagaaattttggggattttggtgtgtagattgtagattgtaaaatta 10269305  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    || ||||||||||||||||||| | ||||||    
T  10269306 ggcttccaattttatatatttgggaaagaaa 10269336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 320
Target Start/End: Original strand, 9876053 - 9876361
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||| |||||||  |||||||||| |||||| | ||||| |||||||||||||||||  | |||| ||| ||  |||||||| ||    
T  9876053 ggacaccaacattcaagcattctcacaataccattaaacttggagcctgaagatgaagcttgactttcataacagttttttcccatattcccacccc-ca 9876151  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 210  Q
    ||||||||||||||| || || | |||||||| || ||||||||  ||| |||  |||| |||||| |        |||||||||||||| |||||||||    
T  9876152 tcatttcagattcaatttcaatagttttgcttcaaaaaattttgaggattttggctttcagattcactacgaaaaaattagggtttgaagttttttgaat 9876251  T
Q  211 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 310  Q
    ||||| |||||   |||||| ||||||| | |||||||| |  ||| | ||||||||||| || |||||| |||||||||| |||||||||| | ||| |    
T  9876252 tggggcagaactggaccacttattattggaggaaatttttgtgattatagagtgtagattgcagattgtataattagggtttcaattttatacaattggg 9876351  T
Q  311 gaagaaagag 320  Q
    ||||||||||    
T  9876352 gaagaaagag 9876361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 9186302 - 9186432
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| ||||||||||||| |||||||||| |||||||||||| |||||||||  || |||||||||||||||||||| ||||||||||||    
T  9186302 attagggtttaaagttttttgaattgggtaagaacgttatcactaattattggaagaaatttatgggattttggagtgtagattacagattgtaaaatta 9186401  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    ||||| |||||||| ||||||| ||||||||    
T  9186402 gggtttcaattttaaatatttggggaagaaa 9186432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 31 - 321
Target Start/End: Complemental strand, 461756 - 461467
Alignment:
Q  31 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 130  Q
    ||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || || | ||| ||  ||||| || ||||||||||||||||| || |    
T  461756 tctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgtttcttcccatattcccacaccccatcatttcagattcaatttca 461657  T
Q  131 acaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 230  Q
    | | ||||| || || ||||||||  ||| |||| |||| ||||||||         ||||||||||||| ||||||||||||||||||||   ||||||    
T  461656 atagttttgtttcaa-aaattttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttttgaattggggaagaactggaccact 461558  T
Q  231 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
     ||||  | | ||||||||||  |||||||||||||||||  | |||||  |||||||||| |||||||||| | ||||||||||||||||    
T  461557 tattacaggaggaaattttggtgattttggagtgtagattggagattgtgtaattagggttacaattttatacaattgaggaagaaagagc 461467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 31 - 317
Target Start/End: Complemental strand, 33159236 - 33158951
Alignment:
Q  31 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 130  Q
    ||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||| || | |  ||||||||  |||||||||||||||| || |    
T  33159236 tctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgctttttccat-attcccaccccctatcatttcagattcaatttca 33159138  T
Q  131 acaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 230  Q
    | | |||||||| || ||| ||||  ||| |||| |||| ||||||||         ||||||||||||| ||||||||||||||||||||   ||||||    
T  33159137 atagttttgcttcaaaaaaatttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttttgaattggggaagaaccgaaccact 33159038  T
Q  231 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 317  Q
     |||| || | ||||||||||  ||||||||||||||||| || |||||  |||||||||| |||||||||| | ||| ||||||||    
T  33159037 tattactggaggaaattttggtgattttggagtgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaaa 33158951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 320
Target Start/End: Complemental strand, 38881992 - 38881691
Alignment:
Q  22 ttcaagcactctca--catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacc-cctcatcatttca 118  Q
    ||||||||||||||  ||||||| |||||| |||||||| ||||| ||||| |||||||||||||| |||| ||| ||  | |||| || ||||||||||    
T  38881992 ttcaagcactctcatacatcaccgttaaacttggagcttgaagatgaagctcgactttcataattgttttttcccatattctcacctccccatcatttca 38881893  T
Q  119 gattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaag 218  Q
    ||||||| || || | |||||||| |||||||||||  ||| |||  |||  || | |          |||||||||| ||| |||||||||||||||||    
T  38881892 gattcaatttcaatagttttgcttcaagaaattttgaggattttggcttttagaataagaaaaaaaaaattagggtttcaagttttttgaattggggaag 38881793  T
Q  219 aacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 318  Q
    |||   |||||| ||||||| ||||||||| ||   |||||||||||| ||| ||||||||  ||||| ||||||||||||||||||||| |||||||||    
T  38881792 aactggaccacttattattggaagaaatttgggtggttttggagtgtacattgcatattgtgtaattaaggttccaattttatatatttggggaagaaag 38881693  T
Q  319 ag 320  Q
    ||    
T  38881692 ag 38881691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 10268223 - 10268093
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| | |||  |||||||||||| ||||| ||||||||||| ||||||||| ||| |||||||||||||||||| | |||| |||||||    
T  10268223 attagggtttgaagttatttacattggggaagaatgttactactaattattggaagaaatttgggggattttggagtgtagattatagattgaaaaatta 10268124  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    ||||||||||| |||||||||| ||||||||    
T  10268123 gggttccaattctatatatttggggaagaaa 10268093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 189 - 321
Target Start/End: Complemental strand, 10770768 - 10770636
Alignment:
Q  189 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 288  Q
    |||||||||||| |||| |||||| |||| ||||||  || |||||| | |||||||||||||| |||||||||||  ||||||| ||||||||||||||    
T  10770768 tagggtttgaagtttttagaattgaggaaaaacgttgtcattaattaattaaagaaattttggggattttggagtgcggattacagattgtaaaattagg 10770669  T
Q  289 gttccaattttatatatttgaggaagaaagagc 321  Q
    | |||||||||||| ||||| ||||||||||||    
T  10770668 gctccaattttatagatttggggaagaaagagc 10770636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 44620343 - 44620472
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||| | | ||| ||||||| |||||| |||||||||||||||| ||||| ||||| |||||||||||||| ||||| | ||||||||||||    
T  44620343 attagggtttgaggttatttcaattggg-aagaacattaccactaattattggaagaatttttgtgaattttggagtgtggattaaagattgtaaaatta 44620441  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    ||||| |||||||||| ||||| ||||||||    
T  44620442 gggtttcaattttatacatttggggaagaaa 44620472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 36 - 321
Target Start/End: Original strand, 1321829 - 1322115
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  1321829 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccatattcccaccccccttcatttcagattcaatttcaatagt 1321928  T
Q  136 tttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 234  Q
    ||||||| |||||||||||  ||| |||  ||||  |||||||        | ||||||||| ||| ||||||||||||||||||||   |||||| |||    
T  1321929 tttgcttcaagaaattttgtggattttggctttcatattcaatacgaaaaaaattagggtttcaagttttttgaattggggaagaactgaaccacttatt 1322028  T
Q  235 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    |||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  1322029 attggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttccaattttatacaattggggaagacagagc 1322115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 320
Target Start/End: Original strand, 25373335 - 25373440
Alignment:
Q  215 gaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaag 314  Q
    |||||| ||||| ||| ||||||| ||||||||||||  ||||||||||||||||||||||| | | ||| ||||||||||||| |||||||||||||||    
T  25373335 gaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacatatagcacaatcagggttccaatttcatatatttgaggaag 25373434  T
Q  315 aaagag 320  Q
    ||||||    
T  25373435 aaagag 25373440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 25705652 - 25705571
Alignment:
Q  240 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  25705652 aagaaattttggtgattttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaagagc 25705571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 15684178 - 15684048
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||| ||||||  |||| ||||||||||||||||||  ||  ||||| || |||||||||| ||||||||| | | ||||||||| |||||||||||     
T  15684178 attaggttttgaaatttttagaattggggaagaacgttgtcatcaattaatggaagaaatttttggaattttgaactctagattacagattgtaaaattg 15684079  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    |||||||||||||||| ||||| ||||||||    
T  15684078 gggttccaattttatagatttggggaagaaa 15684048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 320
Target Start/End: Original strand, 25402504 - 25402610
Alignment:
Q  214 ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaa 313  Q
    ||||||| ||||| ||| ||||||| ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||| ||||    
T  25402504 ggaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaa 25402603  T
Q  314 gaaagag 320  Q
    |||||||    
T  25402604 gaaagag 25402610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 320
Target Start/End: Original strand, 25707013 - 25707119
Alignment:
Q  214 ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaa 313  Q
    ||||||| ||||| ||| ||||||| ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||| ||||    
T  25707013 ggaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaa 25707112  T
Q  314 gaaagag 320  Q
    |||||||    
T  25707113 gaaagag 25707119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 12515499 - 12515395
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| ||||||||| |||||||||||||| | |||||||  ||| ||||||||||| |||||||||||||||||| | ||||||||||||    
T  12515499 attagggtttgaagttttttgaatcggggaagaacgttatcgctaattagggaa-gaaattttggggattttggagtgtagattaaagattgtaaaatta 12515401  T
Q  287 gggttc 292  Q
     |||||    
T  12515400 cggttc 12515395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 11719865 - 11719746
Alignment:
Q  202 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 301  Q
    |||||||||||||||||||||||  ||  ||||| || ||||||||||||| |||||||| | ||| | | | ||||||||||| |||||||||||||||    
T  11719865 tttttgaattggggaagaacgttgtcatcaattaatggaagaaattttggggattttggactctaggtgataaattgtaaaattggggttccaattttat 11719766  T
Q  302 atatttgaggaagaaagagc 321  Q
    | ||||| ||||||||||||    
T  11719765 agatttggggaagaaagagc 11719746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 25370865 - 25370798
Alignment:
Q  254 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  25370865 attttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaagagc 25370798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 33748935 - 33748793
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||||||||| ||| ||||||| |||||||| ||||| || ||||||||||||||  | ||||  || ||  |||||||| ||    
T  33748935 ggacaccaacattcaagcactctcacaacactattaaacttggagcttgaagatgaaacttgactttcataaccg-ttttttccatattcccaccccaca 33748837  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttg 154  Q
    ||||||||||||||| || || | |||||||| |||||||||||    
T  33748836 tcatttcagattcaatttcaatagttttgcttcaagaaattttg 33748793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 66 - 321
Target Start/End: Complemental strand, 42895317 - 42895061
Alignment:
Q  66 aagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaa 165  Q
    ||||| ||||||||| | || |||| ||| ||  |||||||| ||||||||||||||||| || || | |||||||| |||||||||||  ||| |||      
T  42895317 aagctcgactttcatgactgttttttcccatattcccaccccccatcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattttggc 42895218  T
Q  166 tttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtg 264  Q
    ||||  |||||||        | ||||||||||||| ||||||||||||||||||||   |||| | || |||| |||| |||||||  ||||| |||||    
T  42895217 tttcaaattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactggaccatttataattggaagatattttggtgattttagagtg 42895118  T
Q  265 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    || ||| || |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  42895117 taaattgcagattgtgtaattagggttccaatgttatacaattggggaagaaagagc 42895061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 17807446 - 17807313
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||| ||||||| ||||||||||||||||||| |||  ||  ||||| || ||||| ||||||| |||||| | | ||| | ||| ||| ||||||||    
T  17807446 attaggttttgaagttttttgaattggggaagaatgttgtcatcaattaatggaagaatttttggggattttgaactctaggtgacaaattataaaatta 17807347  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||||||| |||||||||||    
T  17807346 gggttccaaatttatatatttgtggaagaaagag 17807313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 187 - 318
Target Start/End: Original strand, 11790496 - 11790627
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||| ||||||| |||| ||||| |||||||| |||  ||  ||||| || ||||||||||||| |||||||| | ||||| ||| |||||||||| |    
T  11790496 attaggttttgaagtttttagaatttgggaagaaggttgtcatcaattaatggaagaaattttggggattttggactatagataacaaattgtaaaatca 11790595  T
Q  287 gggttccaattttatatatttgaggaagaaag 318  Q
     ||||||| ||||||| |||||||||||||||    
T  11790596 aggttccatttttatagatttgaggaagaaag 11790627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 321
Target Start/End: Original strand, 31823142 - 31823276
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| |||||||||||||| |||||   |||||||||||||  | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  31823142 attagggtttgaagttttttgaattggggcagaactgaaccactaattatttgaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 31823241  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    |||||||||||||||| | ||| ||||||||||||    
T  31823242 gggttccaattttatacaattggggaagaaagagc 31823276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 321
Target Start/End: Original strand, 32823938 - 32824072
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| |||||||||||||||| |||   |||||| ||||||| | ||||||| ||  |||||  |||||||||| || |||||  |||||    
T  32823938 attagggtttgaagttttttgaattggggaaaaactgaaccacttattattggaggaaatttaggcgattttatagtgtagattgcagattgtgtaatta 32824037  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    |||||||||||||| | | ||| ||||||||||||    
T  32824038 gggttccaattttaaacaattggggaagaaagagc 32824072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 25371636 - 25371781
Alignment:
Q  33 tcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaac 132  Q
    ||||||||||||||||| |||||||| ||||| ||||| ||| ||||||| || |||| ||| ||  |||||||||||||||||| ||||||| || ||     
T  25371636 tcacatcaccattaaacttggagcttgaagatgaagctcgacattcataactgttttttcccatatgcccacccctcatcatttcggattcaatttcaat 25371735  T
Q  133 aattttgcttgaagaaattttggtgatcttgaatttcggattcaat 178  Q
    | |||||||  || |||||||   ||| ||| ||||| ||||||||    
T  25371736 agttttgctgcaataaattttttggattttggatttcagattcaat 25371781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 9186447 - 9186522
Alignment:
Q  297 tttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcact 372  Q
    |||||||||||| ||||||||||||||  |||||||| ||||||||| |||||  || ||||||||||||||||||    
T  9186447 tttatatatttggggaagaaagagcaagtcattttctgcaaatcaatcaatttagtcattggaaattttggtcact 9186522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 24527303 - 24527184
Alignment:
Q  202 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 301  Q
    ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||    
T  24527303 tttttgaattggggaagaactggaccacttattattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttccaattttat 24527204  T
Q  302 atatttgaggaagaaagagc 321  Q
    | | ||| |||||| |||||    
T  24527203 acaattggggaagatagagc 24527184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 37525267 - 37525149
Alignment:
Q  203 ttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 302  Q
    |||||||||||||||||||   |||||| |||| || | ||||||||||  |||||||||||||||||  | |||||  |||||||||| ||||||||||    
T  37525267 ttttgaattggggaagaactgaaccacttattagtggaggaaattttggtgattttggagtgtagattgaagattgtgcaattagggttacaattttata 37525168  T
Q  303 tatttgaggaagaaagagc 321  Q
     | ||| |||| |||||||    
T  37525167 caattggggaataaagagc 37525149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 41041166 - 41041032
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| | |||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  41041166 attagggttttaagttatttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 41041067  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||||||||||| ||||||||||||    
T  41041066 gggttccaaatttatatatttggggaagaaagagc 41041032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 13484964 - 13484831
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  13484964 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 13484865  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
     |||||||| |||||||||||| |||||||||||    
T  13484864 aggttccaaatttatatatttggggaagaaagag 13484831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 37525418 - 37525333
Alignment:
Q  31 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    ||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||||||||    
T  37525418 tctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccaccccccatcattt 37525333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 41824394 - 41824261
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||  | ||| ||| ||| ||||    
T  41824394 attagggttttaagttttttgaattggggaagaactttgacatcaattcatggaagaaattttggggattttgaactctacgtgacaaattataacatta 41824295  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||| ||| | |||||||||| |||||||||||    
T  41824294 gggtttcaaatatatatatttggggaagaaagag 41824261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 315
Target Start/End: Complemental strand, 31199909 - 31199781
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| || |||||||| ||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  31199909 attagggttttaagtttgttgaattgaggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 31199810  T
Q  287 gggttccaattttatatatttgaggaaga 315  Q
    |||||||||||||||| | ||| ||||||    
T  31199809 gggttccaattttatacaattggggaaga 31199781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 33748759 - 33748644
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||  |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  33748759 attagggtttgaatttttttgaattggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 33748660  T
Q  287 gggttccaattttata 302  Q
     |||||||||||||||    
T  33748659 aggttccaattttata 33748644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 11720047 - 11719994
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagat 64  Q
    ||||| ||||||||||| ||||||||||||||||||| ||| |||||| |||||    
T  11720047 ggacaccaacattcaagtactctcacatcaccattaagcatagagcttgaagat 11719994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 22273535 - 22273668
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||| ||| ||| || ||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||    
T  22273535 attaggattttaagtttcttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtgacaaattataacatta 22273634  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||||||| |||||||||||    
T  22273635 gggttccaaatttatatatttggggaagaaagag 22273668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 31822975 - 31823028
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagat 64  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||| || |||||    
T  31822975 ggacaccaacattcaagcactctcacaacaccattaaacttggagtttgaagat 31823028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 319
Target Start/End: Original strand, 29693963 - 29694095
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| ||||| |||||| ||||||| ||  ||  ||||  || ||||||| ||| | |||||| | | ||| | ||| ||| ||| ||||    
T  29693963 attagggttttaagttttttaaattggagaagaactttgtcatcaattcatggaagaaatcttgcggattttgaactctaggtgacaaattataacatta 29694062  T
Q  287 gggttccaattttatatatttgaggaagaaaga 319  Q
    ||||||||| |||||||||||| ||||||||||    
T  29694063 gggttccaaatttatatatttggggaagaaaga 29694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 32823816 - 32823863
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataat 83  Q
    |||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  32823816 catcaccattaaacttgaagcttgaagataaagctcgactttcataat 32823863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 11790317 - 11790370
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagat 64  Q
    ||||| ||||||||||| ||||||||||||||||| || || |||||| |||||    
T  11790317 ggacaccaacattcaagtactctcacatcaccattcaagatagagcttgaagat 11790370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 42895353 - 42895321
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaac 49  Q
    ||||||||||||||||||||| |||||||||||    
T  42895353 caacattcaagcactctcacaacaccattaaac 42895321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 44620244 - 44620311
Alignment:
Q  87 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttgg 155  Q
    |||||||  |||||||||||| ||||||||||||||||| |  |||| ||||| |||||| ||||||||    
T  44620244 ttttgccgatacacccacccc-catcatttcagattcaattacaacagttttgtttgaaggaattttgg 44620311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 1e-63; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 13 - 321
Target Start/End: Complemental strand, 26448342 - 26448037
Alignment:
Q  13 acatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatc 112  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| ||| | |||||||||||| |||| |  || ||||| ||  ||||||| |||||    
T  26448342 acatcaacattcaaacactctcacatcaccattaaagatggagcttgaaggtgaagcttgactttgataactctttgtgcccatatgcccaccc-tcatc 26448244  T
Q  113 atttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattg 212  Q
    ||||||||||||| ||||||| |||||||||||||||||||||  ||  ||  |||  ||||||||        |||||||||||||| |||||||||||    
T  26448243 atttcagattcaatttgaacagttttgcttgaagaaattttgggtattctggtttttagattcaataaaaaaa-attagggtttgaagttttttgaattg 26448145  T
Q  213 gggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgagga 312  Q
     | ||| ||||||||||||||||||| |||||||||| ||  ||||||||| ||||| | |||||||||||||| |||||||||||||||||||||||||    
T  26448144 agaaaggacgttaccactaattattggaagaaattttaggg-ttttggagtatagataaaatattgtaaaattaaggttccaattttatatatttgagga 26448046  T
Q  313 agaaagagc 321  Q
     ||||||||    
T  26448045 tgaaagagc 26448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 99 - 319
Target Start/End: Complemental strand, 30501610 - 30501391
Alignment:
Q  99 acccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttga 198  Q
    ||||||||  ||||||||||||||||| ||||||| ||||||||||||||||||| | ||   ||| |||||||||||||        || ||||||||     
T  30501610 acccacccaccatcatttcagattcaatttgaacagttttgcttgaagaaattttagggaatctgattttcggattcaataaaaaaaaat-agggtttgg 30501512  T
Q  199 agctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattt 298  Q
     | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  30501511 ggttttttgaattggggaagtacgttaccactaattattgaaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattt 30501412  T
Q  299 tatatatttgaggaagaaaga 319  Q
    |||||||| ||||||||||||    
T  30501411 tatatattggaggaagaaaga 30501391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 113 - 317
Target Start/End: Original strand, 40962981 - 40963184
Alignment:
Q  113 atttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattg 212  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||  ||   ||||||||||||        |||||||||||||  |||||||||||    
T  40962981 atttcagattcaatttgaacaattttgcttgaagaaattttgtggattctggtattcggattcaataaaaaaa-attagggtttgaatttttttgaattg 40963079  T
Q  213 gggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgagga 312  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||    
T  40963080 gggaagaacgttaccactaattattgtaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattttatatatttgggga 40963179  T
Q  313 agaaa 317  Q
    |||||    
T  40963180 agaaa 40963184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 11 - 319
Target Start/End: Original strand, 1847154 - 1847462
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||    
T  1847154 ggacaccaacattcaagctctctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccacccccca 1847253  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 210  Q
    |||||||||||||||  | || | |||||||| |||||||||||  ||| |||  ||||  |||||||        ||||||||||| || ||||| |||    
T  1847254 tcatttcagattcaatatcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgtagttttttaaat 1847353  T
Q  211 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 310  Q
    |||||||||||   |||| |  |||||| | ||||||||||  |||||| ||||||||||||| |||||  ||||||||||||||||||||| ||||| |    
T  1847354 tggggaagaactgaaccattttttattggatgaaattttggtgattttgaagtgtagattacaaattgtgtaattagggttccaattttatacatttggg 1847453  T
Q  311 gaagaaaga 319  Q
    |||||||||    
T  1847454 gaagaaaga 1847462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 41945600 - 41945898
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| | ||||||    
T  41945600 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccaccccccttcattt 41945699  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| ||||||||||| || |||||  ||| |||  |||| ||||||||        |||||| |||| |  ||||||| |||||||    
T  41945700 tagattcaatttcaacagttttgcttgaataa-ttttgcagattttggttttcagattcaattaaaaaa-attaggatttgcaattttttgatttgggga 41945797  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| ||| |  |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  41945798 agaacgtgacccttaattattggaagaaaatttagagattttggagtgtagattacacatcgtaaaattagggttccaattttatatatttggggaagaa 41945897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 23 - 319
Target Start/End: Complemental strand, 32843017 - 32842721
Alignment:
Q  23 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 122  Q
    ||||||| ||| |||||||||||||||||  || || ||||| ||||| |||||| | || |  | |||||| ||| |||||| | |||||||||  |||    
T  32843017 tcaagcattctgacatcaccattaaacataaagtttgaagatgaagctcgactttgagaacttgtgttgcccatacgcccaccacccatcatttcgcatt 32842918  T
Q  123 caaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 222  Q
    |||  ||||||||||||||||||    |||||| ||| ||| ||||| ||||||||        |||||||||||||| |||| ||| |  |||||||||    
T  32842917 caatctgaacaattttgcttgaattttttttggggattttggatttcagattcaatcaaaacaaattagggtttgaagtttttagaagtaaggaagaacg 32842818  T
Q  223 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 319  Q
    ||  || |||||| || |||||||||||||||||||||| ||||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||    
T  32842817 ttgtcattaattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggttccaattttatagatttgaggaagaaaga 32842721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 87 - 313
Target Start/End: Complemental strand, 49495011 - 49494787
Alignment:
Q  87 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttga-atttcggattcaatnnnnnnn 185  Q
    |||||||| |||||||||||| ||||||||||||||||| |  |||| ||||| |||||| |||||| | ||| ||   ||||||||||||||           
T  49495011 ttttgcccatacacccacccc-catcatttcagattcaattataacagttttgtttgaaggaattttcgggatttttttatttcggattcaatcaaaaa- 49494914  T
Q  186 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 285  Q
     |||||||||||| | | ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||    
T  49494913 -attagggtttgaggttatttgaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatt 49494815  T
Q  286 agggttccaattttatatatttgaggaa 313  Q
    ||||||||||||||||| ||||| ||||    
T  49494814 agggttccaattttatacatttggggaa 49494787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 20 - 321
Target Start/End: Original strand, 48634872 - 48635173
Alignment:
Q  20 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 119  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| || ||||  || ||  |||||||| |||||||||||    
T  48634872 cattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactgtttttttccatattcccaccccccatcatttcag 48634971  T
Q  120 attcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 219  Q
    |||||| || || | |||||||| |||||||||||  ||| |||| ||||  |||||||        |||||||||||||| ||||||||||||||||||    
T  48634972 attcaatttcaatagttttgctttaagaaattttgaggattttgactttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaaga 48635071  T
Q  220 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 319  Q
    ||   |||| | || |||| | || ||||| |  ||||| ||||||| |||  | |||||  ||||||||||||||| ||||| | ||| ||||||||||    
T  48635072 actggaccatttataattggaggatattttagtgattttagagtgtaaattgtagattgtgtaattagggttccaatgttatacaattggggaagaaaga 48635171  T
Q  320 gc 321  Q
    ||    
T  48635172 gc 48635173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 37865791 - 37865676
Alignment:
Q  202 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 301  Q
    ||||||| |||||||||||||| |||  ||||||||  |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  37865791 tttttgatttggggaagaacgtgacccttaattattagaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttat 37865692  T
Q  302 atatttgaggaagaaa 317  Q
    ||||||| ||||||||    
T  37865691 atatttggggaagaaa 37865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 32 - 321
Target Start/End: Complemental strand, 24382293 - 24382004
Alignment:
Q  32 ctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaa 131  Q
    ||||||||||||||| || |||||||| ||||| ||| |  ||||||||||  | ||||  || ||  |||||||| ||||||||||||||||| || ||    
T  24382293 ctcacatcaccattatacttggagcttcaagatgaagttaaactttcataacagtttttttccatattcccaccccccatcatttcagattcaatttcaa 24382194  T
Q  132 caattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccacta 231  Q
     | |||||||| || |||| |||  ||| |||| |||| ||||||||        |||||||||||||| ||||| ||||||||||||||   | ||||     
T  24382193 tagttttgcttcaaaaaatcttgaggattttgactttcagattcaatgcgaaaaaattagggtttgaagattttttaattggggaagaactggatcactt 24382094  T
Q  232 attattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    |||| |||| ||||||||||  |||||||||||||||||  | |||||  |||||||||| ||| |||||| | ||| ||||||||||||    
T  24382093 attactgaaggaaattttggtgattttggagtgtagattgaagattgtgtaattagggttacaactttatacaattggggaagaaagagc 24382004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 2975883 - 2975749
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| ||||||||||||||||||||   ||| || ||||||| ||||||||||||  ||||||||||||||| |  | |||||  |||||    
T  2975883 attagggtttgaagttttttgaattggggaagaactggaccgcttattattggaagaaattttggtgattttggagtgtagaatgaagattgtgtaatta 2975784  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
      |||||||||||||||||||| ||||||||||||    
T  2975783 aagttccaattttatatatttggggaagaaagagc 2975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 302
Target Start/End: Complemental strand, 31886088 - 31885827
Alignment:
Q  40 accattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttg 139  Q
    |||||||||| |||| ||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| | |||||| |||||||| || || | | |||    
T  31886088 accattaaacttggatcttgaagatgaagctcgactttcataactgttttttcccatattcccacccc-cgtcattttagattcaatttcaatagtcttg 31885990  T
Q  140 cttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattga 239  Q
    ||| |||||||||||  ||| |||  ||||  |||||||        |||||||||||||| ||||| ||||||||||||||   |||||| |||||||     
T  31885989 cttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttcaattggggaagaactgaaccacttattattgg 31885890  T
Q  240 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 302  Q
    | ||||||||||  ||||| ||||||||||| || |||||  |||||| ||||||||||||||    
T  31885889 aggaaattttggtgattttagagtgtagattgcagattgtgtaattagagttccaattttata 31885827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 33051144 - 33051253
Alignment:
Q  208 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 307  Q
    ||||||||||||| ||||||||||||||||| ||||  |||||| ||||||||||||| ||||| |||||||| ||||| |||||| |||||||| ||||    
T  33051144 aattggggaagaatgttaccactaattattggaagattttttggaaattttggagtgtggattaaatattgtataattatggttcctattttatacattt 33051243  T
Q  308 gaggaagaaa 317  Q
    | ||||||||    
T  33051244 ggggaagaaa 33051253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 37886367 - 37886239
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||||||||||||    
T  37886367 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccctcatcattt 37886268  T
Q  117 cagattcaaattgaacaattttgcttgaa 145  Q
     |||||||| || |||| |||||||||||    
T  37886267 tagattcaatttcaacagttttgcttgaa 37886239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 33112441 - 33112298
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacaccca-cccctc 109  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || |||| ||| ||  |||| |||| |    
T  33112441 ggacaccaacattcaagcactctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgttttttcccatattcccaccccccc 33112342  T
Q  110 atcatttcagattcaaattgaacaattttgcttgaagaaatttt 153  Q
    |||||||||||| ||| || || | |||||||| ||||||||||    
T  33112341 atcatttcagatccaatttcaatagttttgcttcaagaaatttt 33112298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 321
Target Start/End: Complemental strand, 35862141 - 35861831
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||| |||| |||||||||||||||||||||||| |||||| ||||| ||  |  ||||| ||||||| |||||||| |||  ||||| | ||    
T  35862141 ggacaccaacactcaaacactctcacatcaccattaaacatagagcttgaagatgaaaatcaactttgataattgtttttgcccatacgtccaccaccca 35862042  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatc-ttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaa 209  Q
    |||||||||||||||  ||||||      ||||||| |||||||| |||| ||||||||||||||||||        | |||| || |||| ||||| ||    
T  35862041 tcatttcagattcaacctgaacaccaaaacttgaaggaattttggggatctttgaatttcggattcaataaaaaaa-aataggtttagaag-ttttttaa 35861944  T
Q  210 ttggggaagaacgttaccactaattattgaaaga-aattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 308  Q
     |||||||||| |||  ||  |||||  | |||| | ||||||| |||||||| | ||||||||| ||| || |||||||||| |||||||||| |||||    
T  35861943 atggggaagaatgttgtcatcaattaaaggaagatatttttggggattttggactatagattacaaattttataattagggtttcaattttatagatttg 35861844  T
Q  309 aggaagaaagagc 321  Q
     ||||||||||||    
T  35861843 gggaagaaagagc 35861831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 45897640 - 45897496
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattg-cttttgcccttacacccacccctc 109  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||| ||||  |  |||| ||| ||  |||||||| |    
T  45897640 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgacttttataaccgtttttttcccatattcccaccccac 45897541  T
Q  110 atcatttcagattcaaattgaacaattttgcttgaagaaattttg 154  Q
    ||||||||| |||||| || || | |||||||| |||||||||||    
T  45897540 atcatttcatattcaatttcaatagttttgcttcaagaaattttg 45897496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 23775149 - 23775353
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    ||||||||||||||||||||| ||||||| ||| | |||||  ||||| ||||| ||||||||||| || |||| ||| ||  |||| ||| ||||||||    
T  23775149 caacattcaagcactctcacaacaccattgaacttagagctcgaagatgaagctcgactttcataactgttttttcccatattcccatcccccatcattt 23775248  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
    ||||||||| || || | |||||||| |||||||||||  ||| |||  ||||  ||| |||        |||||||||||||| |||||||| ||||||    
T  23775249 cagattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattaaatacgaaaaaattagggtttgaagttttttgaagtgggga 23775348  T
Q  217 agaac 221  Q
    |||||    
T  23775349 agaac 23775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 2976024 - 2975887
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||| ||||||||||||||||||| |||| ||| ||||| ||||| |||||| |||| || |||| ||| ||  ||||||||| |    
T  2976024 ggacaacaacattcaagcaatctcacatcaccattaaacttggaacttgaagatgaagctcgactttgataactg-tttttcccatattcccacccctta 2975926  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaa 149  Q
    ||||||||||||||| || || | |||||||| ||||||    
T  2975925 tcatttcagattcaatttcaatagttttgcttcaagaaa 2975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 321
Target Start/End: Complemental strand, 18429314 - 18429030
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    ||||||| |||||| |||||||| ||||| ||||| |||||||||||    |||| ||||||  | ||||||   |||||||| |||||| || || | |    
T  18429314 catcaccgttaaacttggagcttgaagatgaagctcgactttcataacaattttttcccttattctcaccccgt-tcatttcaaattcaatttcaatagt 18429216  T
Q  136 tttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 235  Q
    ||||||| |||||||||||  ||| |||| |||| ||||||||        ||| |||||| ||| ||||||||||||||||||||   |||||| ||||    
T  18429215 tttgcttcaagaaattttgtagattttgactttcagattcaatacaaaaaaattcgggtttcaagttttttgaattggggaagaactggaccacttatta 18429116  T
Q  236 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||  | ||||||| ||  ||||| || | |||||| || |||||  |||||||||| |||||||||| | ||| |||||| |||||    
T  18429115 ttagaggaaatttaggtgattttagaatatagattgcagattgtgtaattagggtttcaattttatacaattggggaagacagagc 18429030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 321
Target Start/End: Complemental strand, 45256058 - 45255773
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataat--tgcttttgcccttacacccacccctcatcatttcagattcaaattgaaca 133  Q
    |||||||||||||| |||||||| || || ||||| |||||||||||   |  |||| ||| ||  | |||||| | ||||||||||||||| || || |    
T  45256058 catcaccattaaacttggagcttgaaaatgaagctcgactttcataacaattttttttcccatattctcacccc-cttcatttcagattcaatttcaata 45255960  T
Q  134 attttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaat 233  Q
     ||||| || |||||||||||  ||| |||  |||| ||||||||        |||||||||| ||| ||||||||||||||||||||   |||||| ||    
T  45255959 gttttgtttcaagaaattttgtggattttggctttcagattcaatacgaaaa-attagggtttcaagttttttgaattggggaagaactggaccacttat 45255861  T
Q  234 tattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||| ||||||||| | ||| |||||| |||||    
T  45255860 tattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttcaaattttatacaattggggaagacagagc 45255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 302
Target Start/End: Complemental strand, 33851555 - 33851291
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| |||  |  || ||||| | ||||||||||||||| || || | |    
T  33851555 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccagattcc-accccccttcatttcagattcaatttcaatagt 33851457  T
Q  136 tttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 235  Q
    ||| ||| |||||||||||  ||| |||  |||| ||||||||        |||||||||| ||  ||||||||||||||||||||   |||||| ||||    
T  33851456 ttttcttcaagaaattttgtggattttggctttcagattcaatacaaaaaaattagggtttcaaattttttgaattggggaagaactggaccacttatta 33851357  T
Q  236 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 302  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||| |||||||||||||||    
T  33851356 ttggaggaaatttaggtgattttagaatgtagattgcagattgtgtaatta-ggttccaattttata 33851291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 2378576 - 2378709
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||| ||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  2378576 attagggttttaagttttttgaattagggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataatatta 2378675  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||||||| |||||||||||    
T  2378676 gggttccaaatttatatatttggggaagaaagag 2378709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 42282135 - 42282268
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||  | ||| ||| ||| ||||    
T  42282135 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttggggattttgaattctatgtgacaaattataacatta 42282234  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||||||  |||||||||||    
T  42282235 gggttccaaatttatatatttagggaagaaagag 42282268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 321
Target Start/End: Original strand, 610850 - 610984
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  |||||||||||||||| ||| || | | | | | ||| ||| ||| ||||    
T  610850 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgaaagaaattttggggattgtgaactcttggtgacaaattataacatta 610949  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
     ||||||||  ||||||||||| ||||||||||||    
T  610950 aggttccaaaattatatatttggggaagaaagagc 610984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 51686013 - 51686143
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  51686013 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacatta 51686112  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    |||||  || |||||||||||| ||||||||    
T  51686113 gggttagaaatttatatatttggggaagaaa 51686143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 17516608 - 17516741
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||| ||||||||| ||  ||  ||||  || ||||||||| | | |||||| | | ||| ||||| ||| ||| ||||    
T  17516608 attagggttttaagttttttgaattagggaagaacattgacatcaattcatggaagaaatttggaggattttgaactctaggttacaaattataacatta 17516707  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    | ||||||| |||||||||||| |||||||||||    
T  17516708 gagttccaaatttatatatttggggaagaaagag 17516741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 21350257 - 21350390
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| ||||||||||||||||| || ||  ||  ||||  || ||||||||| ||| |||||  | | ||| | ||| ||| ||| ||||    
T  21350257 attagggttttaagttttttgaattggggaagtacattgacatcaattcatggaagaaatttgggggattttaaactctaggtgacaaattataacatta 21350356  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||||||| |||||||||||    
T  21350357 gggttccaaatttatatatttggggaagaaagag 21350390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 30598791 - 30598658
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||    
T  30598791 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtgacaaattataacatta 30598692  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||||||| || ||||||||    
T  30598691 gggttccaaatttatatatttggggtagaaagag 30598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 321
Target Start/End: Complemental strand, 44268432 - 44268301
Alignment:
Q  189 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 288  Q
    |||||||| ||| ||||||||||||| |||||| ||  || |||||  || ||||||||| ||| |||||| | | | | | ||| ||| ||| ||||||    
T  44268432 tagggttt-aagttttttgaattgggaaagaacattgacattaattcatggaagaaatttgggggattttgaactctgggtgacaaattataacattagg 44268334  T
Q  289 gttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||| |||||||||||| ||||||||||||    
T  44268333 gttccaaatttatatatttggggaagaaagagc 44268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 10380604 - 10380719
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| ||||||||||||||||||||   |||| | || |||| | || |||||||  |||||  |||||| |||||| |||||  |||||    
T  10380604 attagggtttgaagatttttgaattggggaagaactggaccatttataattggaggatattttggagattttaaagtgtaaattacagattgtgtaatta 10380703  T
Q  287 gggttccaattttata 302  Q
    ||||| |||| |||||    
T  10380704 gggtttcaatgttata 10380719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 13466609 - 13466655
Alignment:
Q  18 aacattcaagcactctcacatcaccattaaacatggagcttaaagat 64  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||||    
T  13466609 aacattcaagtactctcacatcaccattaaacatagagcttcaagat 13466655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 23887622 - 23887489
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||  |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  23887622 attagggtttgaaattttttgaattggggcagaactcaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 23887523  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    || || |||||||||| | ||| ||||||||||||    
T  23887522 ggatttcaattttatacaattg-ggaagaaagagc 23887489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 27897646 - 27897512
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||| ||||| ||| ||||| |||||||||||||| ||  ||  ||||  || |||||||||  || |||||| | | ||| | ||| ||| ||| ||||    
T  27897646 attatggttttaagtttttttaattggggaagaacattgacatcaattcatgtaagaaatttgagggattttgaactctaggtaacaaattataacatta 27897547  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||||||||||| ||||||||||||    
T  27897546 gggttccaaatttatatatttggggaagaaagagc 27897512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 23876095 - 23875963
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||| ||||||| |||||||||||||||||||  ||  ||  ||||| || ||||||||||| |||||||| | | || || ||| ||  |||||| |    
T  23876095 attaggttttgaagttttttgaattggggaagaagattgtcatcaattaatggaagaaattttgagaattttgaactcta-atgacaaatgataaaataa 23875997  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||||||| || ||||  |||||||||||    
T  23875996 gggttccaattttgtagattttgggaagaaagag 23875963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 320
Target Start/End: Complemental strand, 45897467 - 45897342
Alignment:
Q  195 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 294  Q
    |||||| |||||||||||| | |||||   | |||| ||||||| | ||||||||    ||| | ||||||||||| ||||||||  ||||||||||| |    
T  45897467 ttgaagttttttgaattggagcagaactgaagcacttattattggaggaaattttcatgattatagagtgtagattgcatattgtgtaattagggttcta 45897368  T
Q  295 attttatatatttgaggaagaaagag 320  Q
    |||||||| | ||| |||||||||||    
T  45897367 attttatacaattggggaagaaagag 45897342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 23292023 - 23291889
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| |||  ||||||||||||||||||| ||  |  |||||  || ||||||||| ||  |||||| | | ||||| ||  ||| ||| ||||    
T  23292023 attagggttttaagtcttttgaattggggaagaacattgacgttaattcatggaagaaatttgggagattttgaactctagatgacgaattataacatta 23291924  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||||||||||   |||||||||||    
T  23291923 gggttccaaatttatatatttatagaagaaagagc 23291889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 30501367 - 30501321
Alignment:
Q  326 cattttctacaaatcaattaatttgatccttggaaattttggtcact 372  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  30501367 cattttctgcaaatcaatcaatttcgtccttggaaattttggtcact 30501321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 22218772 - 22218719
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagat 64  Q
    ||||| ||||||||||| |||||||||||||||||| |||| || ||| |||||    
T  22218772 ggacaccaacattcaagtactctcacatcaccattagacatagaacttgaagat 22218719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 11022125 - 11021825
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||| || ||   ||||||||||||||||    
T  11022125 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgtccatatgaccacccctcatcattt 11022026  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||| |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  11022025 tagattcaatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 11021926  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  11021925 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 11021826  T
Q  317 a 317  Q
    |    
T  11021825 a 11021825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 28247674 - 28247974
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  28247674 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 28247773  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  28247774 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 28247873  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  28247874 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 28247973  T
Q  317 a 317  Q
    |    
T  28247974 a 28247974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 363354 - 363485
Alignment:
Q  187 attagggtttgaagctttt-tgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 285  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||    
T  363354 attagggtttgaagtttttttgaattggagaagaacgttaccactaattattggaagaaattttgaggattttggagtgtagattacatattgtaaaatt 363453  T
Q  286 agggttccaattttatatatttgaggaagaaa 317  Q
    ||||||||||||||||||||||| ||||||||    
T  363454 agggttccaattttatatatttggggaagaaa 363485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 28 - 317
Target Start/End: Complemental strand, 11313402 - 11313127
Alignment:
Q  28 cactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaat 127  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| || | |  |||||||| ||  |||||||| ||||| ||   |||||| |    
T  11313402 cactctcacatcaccattaaacatggagcttgaagataaagcttgactttgatgactctttttgcccatatgcccacccc-catcagtttctattcaatt 11313304  T
Q  128 tgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttacc 227  Q
    |||||| |||||||||||||||||||||  ||  |   |||||||||||||        || |||||||| || ||||| ||||||||||||||||||||    
T  11313303 tgaacagttttgcttgaagaaattttgggaattctagttttcggattcaataaaaaaaaatgagggtttggagtttttttaattggggaagaacgttacc 11313204  T
Q  228 actaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 317  Q
    |||             |||| |||| ||||||||||||| |||| | |||||||||||||||||| ||||||||||||||| ||||||||    
T  11313203 act-------------aattgtggggattttggagtgtacattaaagattgtaaaattagggttctaattttatatatttggggaagaaa 11313127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 38149535 - 38149836
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    ||||||| ||||| |||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  38149535 caacatttaagcattctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 38149634  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntatt-agggtttgaagctttttgaattgggg 215  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        | | ||| |||| |  ||||||| ||||||    
T  38149635 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaaatcaggatttgcaattttttgatttgggg 38149734  T
Q  216 aagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 315  Q
    || ||||| |||  ||||||||| |||||| |||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||    
T  38149735 aataacgtgacccttaattattggaagaaaatttggagattttagagtgtagattacacattgtaaaattagggttccaattttatatatttgggaaaga 38149834  T
Q  316 aa 317  Q
    ||    
T  38149835 aa 38149836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 7744932 - 7745062
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||    
T  7744932 attagggtttgaggttatttcaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaatta 7745031  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    ||||| |||||||||| ||||| | ||||||    
T  7745032 gggtttcaattttatacatttgggaaagaaa 7745062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 17948601 - 17948734
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||| | | ||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||    
T  17948601 attagggtttgaggttatttcaattggggaagaacgttaccaccaattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaatta 17948700  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||| |||||||||| ||||| | |||||||||    
T  17948701 gggtttcaattttatacatttgggaaagaaagag 17948734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 319
Target Start/End: Complemental strand, 10715690 - 10715400
Alignment:
Q  12 gacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcat 111  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||             |||||| |||| |  ||||| || ||  |||||||  |||    
T  10715690 gacaccaacattcaagcactctcacagcaccattaaacatggagctt-------------gactttgataactctttttgtccatatgcccacccg-cat 10715605  T
Q  112 catttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaatt 211  Q
    ||||||  |||||| ||||||| ||||||||||||||||||||| |||  |   ||| |||||||||        |||||||||||||| ||||||||||    
T  10715604 catttcgaattcaatttgaacagttttgcttgaagaaattttggggattctagtttttggattcaataaaaaa--attagggtttgaagttttttgaatt 10715507  T
Q  212 ggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgagg 311  Q
    ||| || ||||||||  |||||||| | ||| |||||||||||||||  || |||||||| | |||||||||||||||||||||||||||||||||| ||    
T  10715506 ggg-aacaacgttactgctaattatcggaaggaattttgggaattttttagggtagattaaagattgtaaaattagggttccaattttatatatttgggg 10715408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 321
Target Start/End: Original strand, 37418263 - 37418569
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgc-ccttacacccacccctcatcatt 115  Q
    ||||||||||||||||||||| ||||||||||| || ||||  ||||| || || ||||||||||| || ||||   || ||  |||||||| |||||||    
T  37418263 caacattcaagcactctcacaacaccattaaacttgaagctcgaagatgaaactcgactttcataactgttttttttccatattcccaccccccatcatt 37418362  T
Q  116 tcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggg 214  Q
    |||||||||| || || | |||||||| |||||| ||||  ||| |||  ||||  |||||||        | ||||||||||||| ||||||||||||     
T  37418363 tcagattcaatttcaatagttttgcttcaagaaactttgaggattttggctttcaaattcaatacgaaaaaaattagggtttgaagttttttgaattggc 37418462  T
Q  215 gaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaag 314  Q
    |||||||   |||| | || |||| | || |||||||  ||||| ||||||| ||| || |||||  ||||||||||||||| ||||| | ||| |||||    
T  37418463 gaagaactggaccatttataattggaggatattttggtgattttagagtgtaaattgcagattgtgtaattagggttccaatgttatacaattggggaag 37418562  T
Q  315 aaagagc 321  Q
    |||||||    
T  37418563 aaagagc 37418569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 2359516 - 2359394
Alignment:
Q  194 tttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcc 293  Q
    ||||||| |||| ||||||||||||||||||  ||  ||||| ||| ||||||||||||| ||||||| | ||||| ||| ||||||||||||||||| |    
T  2359516 tttgaagtttttagaattggggaagaacgttgtcatcaattaatgatagaaattttggga-ttttggactctagatgacaaattgtaaaattagggtttc 2359418  T
Q  294 aattttatatatttgaggaagaaa 317  Q
    ||||||||| ||||| ||||||||    
T  2359417 aattttatagatttggggaagaaa 2359394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 317
Target Start/End: Complemental strand, 35881 - 35575
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| || ||| ||||||||||  | ||||  || ||  ||||| || ||    
T  35881 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaaacttaactttcataaccg-ttttttccatattcccactccaca 35783  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 209  Q
    ||||||||||||||| || || | |||||||| |||||||||||  |||  ||  |||| |||||| |         |||||||||||||| ||||||||    
T  35782 tcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattctggctttcagattcactacgaaaaaaattagggtttgaagttttttgaa 35683  T
Q  210 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 309  Q
    |||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||| ||| || |||||  ||||| ||||| ||||||||| | |||     
T  35682 ttggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtatattgcagattgtgtaattaaggttcgaattttatacaattgg 35583  T
Q  310 ggaagaaa 317  Q
    ||||||||    
T  35582 ggaagaaa 35575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 320
Target Start/End: Original strand, 42880309 - 42880610
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||| ||   ||||||||||| | ||||| |||||| ||||| ||||||||||| || |||| ||| ||  |||| ||| ||| ||||    
T  42880309 caacattcaagcactcgcaa--caccattaaacttagagctcaaagatgaagctcgactttcataactgttttttcccatattcccaacccccatgattt 42880406  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
    | ||||||| || || | |||||||| |||||||||||  ||| |||  ||||  ||| |||        |||||||||||||| ||||| |||||||||    
T  42880407 ctgattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaatttaatacgaaaaaattagggtttgaagttttttaaattgggga 42880506  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    |||||   |||| | || |||| | || |||||||  ||||| ||||||| ||| || |||||  |||||||||| |||| ||||| | ||| |||||||    
T  42880507 agaactggaccatttataattggaggatattttggtgattttagagtgtaaattgcagattgtgtaattagggtttcaatgttatacaattggggaagaa 42880606  T
Q  317 agag 320  Q
    ||||    
T  42880607 agag 42880610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 34400762 - 34400628
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | | | | ||| ||| ||| ||||    
T  34400762 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctgggtgacaaattataacatta 34400663  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||||||||||| ||||||||||||    
T  34400662 gggttccaaatttatatatttggggaagaaagagc 34400628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 42518011 - 42517877
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||||| || ||| |||||| | | ||| | ||| ||| ||| ||||    
T  42518011 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaaattgggggattttgaactctaggtgacaaattataacatta 42517912  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||||||||||| ||||||||||||    
T  42517911 gggttccaaatttatatatttggggaagaaagagc 42517877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 315
Target Start/End: Original strand, 15373554 - 15373683
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgt-taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 285  Q
    |||||||||| ||| |||||||||||||||||||| |  |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  ||||    
T  15373554 attagggttttaagttttttgaattggggaagaacttggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatt 15373653  T
Q  286 agggttccaattttatatatttgaggaaga 315  Q
    ||||||||||||||||| | ||| ||||||    
T  15373654 agggttccaattttatacaattggggaaga 15373683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 320
Target Start/End: Original strand, 17697776 - 17697903
Alignment:
Q  188 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 287  Q
    ||||||||| ||| ||||||||||||||||||||    |||  | |||| ||| ||||||||||| |||||| | | ||| | ||| ||| ||| |||||    
T  17697776 ttagggttttaagttttttgaattggggaagaac----ccatcatttatggaa-gaaattttggggattttgaactctaggtgacaaattataacattag 17697870  T
Q  288 ggttccaattttatatatttgaggaagaaagag 320  Q
    |||||||| |||||||||||| |||||||||||    
T  17697871 ggttccaaatttatatatttggggaagaaagag 17697903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 19907170 - 19907036
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||| ||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  19907170 attagggttttaagttttttgaattggtgaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 19907071  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||| | |||||||||||| ||||||||||||    
T  19907070 gggttccgaatttatatatttggggaagaaagagc 19907036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 42002990 - 42003108
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  ||||||||  |||||||||||||  | || || | |    
T  42002990 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccctatcatttcagattttatttcaatagt 42003089  T
Q  136 tttgcttgaagaaattttg 154  Q
    ||||||| |||||||||||    
T  42003090 tttgcttcaagaaattttg 42003108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 60 - 220
Target Start/End: Complemental strand, 40150825 - 40150664
Alignment:
Q  60 aagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttg-cttgaagaaattttggtga 158  Q
    ||||| || ||||||||| | ||||| |||||||| |||  ||||| | |||||||| ||||||||  ||||||||||||  ||||||||||||||  ||    
T  40150825 aagatgaaacttgactttgagaattgtttttgcccatacggccaccacccatcattttagattcaatctgaacaattttgatttgaagaaattttgaaga 40150726  T
Q  159 tcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaa 220  Q
    | ||| |||| |||||||||        | |||||||||||| |||| |||| |||||||||    
T  40150725 ttttggattttggattcaatgaaaacaaaatagggtttgaagtttttagaataggggaagaa 40150664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 321
Target Start/End: Original strand, 40152135 - 40152346
Alignment:
Q  109 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 208  Q
    ||||||||  |||||||  |||||||||||| |||||||||||||   ||| ||| ||||||||||||||        |||||||||| ||| |||| ||    
T  40152135 catcattttggattcaatctgaacaattttggttgaagaaattttcaggattttggatttcggattcaatcaaatcaaattagggttttaagtttttaga 40152234  T
Q  209 attggggaagaa--cgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 306  Q
    ||||||||||||   |||     |||||| || |||||||| |||  ||||||||  |||||| | | |||| |||||| ||||| |||||||||| |||    
T  40152235 attggggaagaaatggtt---gttaattaatggaagaaattgtggagattttggaccgtagatgagagattgaaaaatttgggtttcaattttatagatt 40152331  T
Q  307 tgaggaagaaagagc 321  Q
    || | ||||||||||    
T  40152332 tgggaaagaaagagc 40152346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 315
Target Start/End: Original strand, 41708097 - 41708225
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| ||||||||||| ||||||||   |||||| ||||| | | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  41708097 attagggttttaagttttttgaattgaggaagaactggaccacttattatgggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 41708196  T
Q  287 gggttccaattttatatatttgaggaaga 315  Q
    |||||||||||||||| | ||| ||||||    
T  41708197 gggttccaattttatacaattggggaaga 41708225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 26581430 - 26581316
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||| ||||||| |||||||||||||||| | ||||  ||  ||||| || |||||||||||||||||||| | | ||| | ||| ||| ||||||||    
T  26581430 attaggttttgaagttttttgaattggggaacagcgttgtcatcaattaatggaagaaattttgggaattttgaactctaggtgacaaattataaaatta 26581331  T
Q  287 gggttccaattttat 301  Q
    || ||| ||| ||||    
T  26581330 ggattctaatcttat 26581316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 16377163 - 16377082
Alignment:
Q  240 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| | | |||||| | ||||| | ||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  16377163 aagaaatttagaggattttgaactgtaggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagc 16377082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 4047703 - 4047758
Alignment:
Q  265 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 320  Q
    ||||| ||| ||| ||||||||||||| |||||||||| ||||| |||||||||||    
T  4047703 tagatgacaaattataaaattagggtttcaattttatagatttggggaagaaagag 4047758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 363509 - 363547
Alignment:
Q  306 ttgaggaagaaagagcaaagcattttctacaaatcaatt 344  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  363509 ttgaggaagaaagagcaaaacattttctgcaaatcaatt 363547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 161813 - 161854
Alignment:
Q  279 taaaattagggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||||||||||| ||| |||||||| |||||||||||    
T  161813 taaaattagggttccaaatttttatatttggggaagaaagag 161854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 2359542 - 2359587
Alignment:
Q  275 attgtaaaattagggttccaattttatatatttgaggaagaaagag 320  Q
    ||||| |||||||||||||||||| ||| ||||| |||||||||||    
T  2359542 attgtcaaattagggttccaatttaatagatttggggaagaaagag 2359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 14387837 - 14387765
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttg 259  Q
    |||||||||  ||| |||||||||||||||||||  ||  ||  |||||||| ||||||||||||| ||||||    
T  14387837 attagggttctaagttttttgaattggggaagaaaattgacatcaattattggaagaaattttggggattttg 14387765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 315
Target Start/End: Original strand, 31474719 - 31474847
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| | | ||||||||||||| |||| | ||  ||||||||  || ||||||| ||| | |||||| | |  || | ||| ||| ||| ||||    
T  31474719 attagggttttaggttttttgaattgggaaagatctttgtcactaattcatggaagaaatcttgaggattttgaactcaaggtcacaaattataatatta 31474818  T
Q  287 gggttccaattttatatatttgaggaaga 315  Q
    ||||||||| |||||||||||| ||||||    
T  31474819 gggttccaaatttatatatttggggaaga 31474847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 5784366 - 5784666
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||| || ||   ||||||||||||||||    
T  5784366 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgtccatatgaccacccctcatcattt 5784465  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||| |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  5784466 tagattcaatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 5784565  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  5784566 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 5784665  T
Q  317 a 317  Q
    |    
T  5784666 a 5784666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 11 - 320
Target Start/End: Complemental strand, 42558546 - 42558248
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||  | ||| |||| || |||||||| ||| |||||| | ||    
T  42558546 ggacaccaacattcaagcactctcacatcaccattaaacatggagcttgaagatgaagctcaaatttgataactgattttgcccatacgcccaccaccca 42558447  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 210  Q
    |||||||||||||||  ||||||||| |||||||||||||||||  ||| ||| |||| |||||||||        |||||||||||||| |||| ||||    
T  42558446 tcatttcagattcaatctgaacaattatgcttgaagaaattttgcggattttggattttggattcaatcaaaaga-attagggtttgaagtttttagaat 42558348  T
Q  211 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 310  Q
    |||| ||||||||   || |||||| || ||||| ||||||  |          ||||| ||| ||||||||||||||||||||||||| || ||||| |    
T  42558347 tgggaaagaacgtcgtcattaattaatggaagaatttttggaga----------tagatgacagattgtaaaattagggttccaattttctagatttggg 42558258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 87 - 317
Target Start/End: Original strand, 51123115 - 51123342
Alignment:
Q  87 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnnt 186  Q
    |||||||| |||||||||||| ||||||||||||||||| |  |||| ||||  |||||| |||||||| ||| ||    ||||||||||||            
T  51123115 ttttgcccatacacccacccc-catcatttcagattcaattacaacagttttatttgaaggaattttggggattttttgattcggattcaatcaaaaa-- 51123211  T
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||| | | ||| |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| |||||   ||||||||||||    
T  51123212 attagggtttgaggttatttcaattggggaagaacgttacctctaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatta 51123311  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    |||||||||||||||| ||||||||||||||    
T  51123312 gggttccaattttatacatttgaggaagaaa 51123342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 11153136 - 11152837
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    ||||| ||||||| |||||||||||||||||||||||||  | ||||| ||| |||||||| |||  |  |||||||| ||   ||||||| ||||||||    
T  11153136 caacactcaagcattctcacatcaccattaaacatggaggatgaagatgaagtttgactttgatagctctttttgcccatatgaccacccc-catcattt 11153038  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| ||   |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  11153037 tagattcaatttcaacagttttgcttgaatgaattttgcagattttagttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 11152938  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||| | |||  ||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||| ||||| |||||||    
T  11152937 agaacatgacccttaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaa 11152838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 187 - 304
Target Start/End: Original strand, 25172701 - 25172818
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||| |||| | ||||||||||||    
T  25172701 attagggtttgaatttttttaaattggggaagaacgttaccactaattattggaagaaattttggagattttggagcgtacattaaagattgtaaaatta 25172800  T
Q  287 gggttccaattttatata 304  Q
    |||||| |||||||||||    
T  25172801 gggttctaattttatata 25172818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 321
Target Start/End: Original strand, 31803190 - 31803500
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||||||||| ||| ||||||| |||||||| ||||| || ||||||||||||||  | ||||  || ||  |||||||| ||    
T  31803190 ggacaccaacattcaagcactctcacaacactattaaacttggagcttgaagatgaaacttgactttcataaccg-ttttttccatattcccaccccaca 31803288  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 209  Q
    ||||||||||||||| || || | |||||||| |||||||||||  |||  ||  |||| |||||| |         |||||||||||||| ||||||||    
T  31803289 tcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattctggctttcagattcactacgaaaaaaattagggtttgaagttttttgaa 31803388  T
Q  210 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 309  Q
    |||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||  |||||||||||||| | |||     
T  31803389 ttggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaacgttccaattttatacaattgg 31803488  T
Q  310 ggaagaaagagc 321  Q
    ||||||||||||    
T  31803489 ggaagaaagagc 31803500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 321
Target Start/End: Complemental strand, 46637365 - 46637056
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | ||||  || ||  |||||||| ||    
T  46637365 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccg-ttttttccatattcccaccccaca 46637267  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 209  Q
    |||||| |||||||| || || | |||||||| |||||||||||  |||  ||  ||||  ||||| |         |||||||||||||| ||||||||    
T  46637266 tcattttagattcaatttcaatagttttgcttcaagaaattttgaggattctggctttcaaattcactacgaaaaaaattagggtttgaagttttttgaa 46637167  T
Q  210 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 309  Q
    |||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  ||||| ||||||||||||||| | |||     
T  46637166 ttggggtagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaaggttccaattttata-aattgg 46637068  T
Q  310 ggaagaaagagc 321  Q
    ||||||||||||    
T  46637067 ggaagaaagagc 46637056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 321
Target Start/End: Complemental strand, 45379658 - 45379374
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    ||||||| |||||| |||||||||||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  45379658 catcaccgttaaacttggagcttaaagatgaagctcgactttcataacaattttttcccatattcccacccc-cttcatttcagattcaatttcaatagt 45379560  T
Q  136 tttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 235  Q
    ||||||| |||||||||||  ||| |||  |||| ||||||||        |||||||||| ||| ||| ||||||||||||||||   |||||| ||||    
T  45379559 tttgcttcaagaaattttgtggattttggctttcagattcaatacaaaaaaattagggtttcaagttttctgaattggggaagaactagaccacttatta 45379460  T
Q  236 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||| ||||||||| | ||| |||||| |||||    
T  45379459 ttggaggaaatttaggtgattttagaatgtagattgcaaattgtgtaattagggttctaattttatacaattggggaagacagagc 45379374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 315
Target Start/End: Original strand, 44158807 - 44159088
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    |||||||||||||| || ||||| ||||| ||||| ||||||||||| |  |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  44158807 catcaccattaaacttgaagcttgaagatgaagctcgactttcataactattttttcccataatcccaccccccttcatttcagattcaatttcaatagt 44158906  T
Q  136 tttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnnta--ttagggtttgaagctttttgaattggggaagaacgttaccactaat 233  Q
    ||||||| |||||||||||  ||| |||  |||| ||||||||        |  ||||||||| ||| |||||||||||||||||||| | |||||| ||    
T  44158907 tttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaaaattagggtttcaagttttttgaattggggaagaacttgaccacttat 44159006  T
Q  234 tattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 315  Q
    ||||| | ||||||| ||  ||||| || |||||||| || |||||  ||| |||||| |||||||||| | ||| ||||||    
T  44159007 tattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaatcagggtttcaattttatacaattggggaaga 44159088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 321
Target Start/End: Original strand, 42135761 - 42136045
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  42135761 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccatattcccaccccccttcatttcagattcaatttcaatagt 42135860  T
Q  136 tttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 235  Q
    ||||||| |||||||||||   || |||| |||| ||||||||        |||| ||||| ||| ||||||||||||||||||||   | |||| ||||    
T  42135861 tttgcttcaagaaattttgtgaattttgactttcagattcaatacgaaaaaatta-ggtttcaagttttttgaattggggaagaactggagcacttatta 42135959  T
Q  236 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||| |  |||||| ||  ||||| || |||||||| || |||||  ||||||| ||||||||||||| | ||| |||||| |||||    
T  42135960 ttggagaaaatttaggtgattttagaatgtagattgcagattgtgtaattaggattccaattttatacaattggggaagatagagc 42136045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 321
Target Start/End: Original strand, 6576774 - 6576906
Alignment:
Q  189 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 288  Q
    |||||||||||| ||||||||||||| || |||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||    
T  6576774 tagggtttgaagttttttgaattgggaaaaaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtttaattagg 6576873  T
Q  289 gttccaattttatatatttgaggaagaaagagc 321  Q
    |||||||||||||| | ||| ||||||||||||    
T  6576874 gttccaattttatacaattggggaagaaagagc 6576906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 18183205 - 18183063
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||  ||||||||||||||||||| |||||||| ||||| || || ||||||||||| || |||| ||| |   |||||||| ||    
T  18183205 ggacaccaacattcaagctttctcacatcaccattaaacttggagcttgaagatgaaactcgactttcataactgttttttcccatgttcccacccc-ca 18183107  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttg 154  Q
    ||||||||||| ||| || || | |||||||| |||||||||||    
T  18183106 tcatttcagatccaatttcaatagttttgcttcaagaaattttg 18183063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 50554634 - 50554500
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| ||| ||| | ||| ||| ||| ||||    
T  50554634 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaagtctaggtaacaaattataacatta 50554535  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||||||||||| ||||||||||||    
T  50554534 gggttccaaatttatatatttggggaagaaagagc 50554500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 33679680 - 33679549
Alignment:
Q  190 agggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattaggg 289  Q
    ||||||||||| ||||||||||||||||||||   || | | ||||||| | ||||||| ||  ||||| ||||||| ||| || |||||  ||||||||    
T  33679680 agggtttgaagttttttgaattggggaagaactggactagttattattggaggaaatttaggtgattttagagtgtatattgcagattgtgtaattaggg 33679581  T
Q  290 ttccaattttatatatttgaggaagaaagagc 321  Q
    |||||||||| || | ||||||||||||||||    
T  33679580 ttccaattttgtacaattgaggaagaaagagc 33679549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 31237273 - 31237139
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||| || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  31237273 attagggttttaagttttttgaattggggaagaacattgacatcaattaatggaagaaatttgggggattttgaactctaggtaacaaattataacatta 31237174  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    |||||||||  ||||||||||| ||||||||||||    
T  31237173 gggttccaaaattatatatttggggaagaaagagc 31237139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 321
Target Start/End: Complemental strand, 35478660 - 35478378
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    |||||||||||||| || ||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  35478660 catcaccattaaacttgaagcttcaagatgaagctcgactttcataacaattttttcccatattcccaccccccatcattttggattttatttcaatagt 35478561  T
Q  136 tttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 235  Q
    ||||||| ||||| |||||  ||| |||  |||  ||||||||        |||||||||||||| |||||||||||||||| |||   |||||| ||||    
T  35478560 tttgcttcaagaagttttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaaaaactaaaccacttatta 35478461  T
Q  236 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||| | ||||||| ||  ||||| ||||||||||   | |||||  |||||||||| |||||||| | | ||||||||||||||||    
T  35478460 ttggaggaaatttaggtgattttagagtgtagat---agattgtgtaattagggtttcaattttaaacaattgaggaagaaagagc 35478378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 18058254 - 18058121
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||| ||||||| |||| |||||||||||||| |||  ||  ||||| |  ||||| ||||| | |||||| | | ||||| ||| ||||||||||||    
T  18058254 attaggttttgaagtttttagaattggggaagaatgttgtcatcaattaattgaagaagttttgaggattttgaactctagatgacaaattgtaaaatta 18058155  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
     ||||||||||||||| ||||| |||||||||||    
T  18058154 aggttccaattttataaatttggggaagaaagag 18058121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 15105986 - 15106116
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | ||||| | ||  ||| ||| ||||    
T  15105986 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgtaagaaattttggggattttgaactgtaggtgacgaattataacatta 15106085  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    || |||||| |||||||||||| ||||||||    
T  15106086 ggattccaaatttatatatttggggaagaaa 15106116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 6817333 - 6817200
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| |||  ||||||||||||||||||| ||  ||  ||||  || |||||||||| ||||||||| | | ||| | ||| ||| ||| ||||    
T  6817333 attagggttttaagtcttttgaattggggaagaacattgacatcaattcatggaagaaattttaggaattttgaactctaggtaacaaattataacatta 6817234  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    |||||| || |||||||||||| |||||||||||    
T  6817233 gggttctaaatttatatatttggggaagaaagag 6817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 18180900 - 18180818
Alignment:
Q  188 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagatt 270  Q
    ||||||||||||| |||||||||||||||||||    |||||| |||| || | ||||||||||  |||||||||||||||||    
T  18180900 ttagggtttgaagttttttgaattggggaagaatcggaccacttattactggaggaaattttggtgattttggagtgtagatt 18180818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 45045365 - 45045232
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | | | ||| ||| ||||    
T  45045365 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctatgtgataaattataacatta 45045266  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||||||| |||||||||||    
T  45045265 gggttccaaatttatatatttggggaagaaagag 45045232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 27952167 - 27952282
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | |||||||  |  || || || ||||||||| | |||||  |||||    
T  27952167 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaagtgatattagaatgtagattaaaaattgtgtaatta 27952266  T
Q  287 gggttccaattttata 302  Q
    ||||| ||||||||||    
T  27952267 gggttacaattttata 27952282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 321
Target Start/End: Original strand, 2870712 - 2870845
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  2870712 attagggttttaag-tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 2870810  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| || ||||||||| | ||||||||||    
T  2870811 gggttccaaattgatatatttgggaaagaaagagc 2870845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 3012309 - 3012175
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| |   |||||| | | ||| | ||| |||  || ||||    
T  3012309 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttggtagattttgaactataggtgacaaattagaacatta 3012210  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||||||||||| ||||||||||||    
T  3012209 gggttccaaatttatatatttggggaagaaagagc 3012175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 33679814 - 33679696
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||  ||  |||||||| ||||||||| ||||  | || || | |    
T  33679814 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcctatattcccaccccccatcatttcggattttatttcaatagt 33679715  T
Q  136 tttgcttgaagaaattttg 154  Q
    ||||||| |||||||||||    
T  33679714 tttgcttcaagaaattttg 33679696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 33599580 - 33599542
Alignment:
Q  279 taaaattagggttccaattttatatatttgaggaagaaa 317  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  33599580 taaaattagggttccaaatttatatatttgtggaagaaa 33599542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 3e-61; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 39922506 - 39922806
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  | ||||||||| ||   ||||| | ||||||||    
T  39922506 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctccttttgcccatatgaccacctcccatcattt 39922605  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  39922606 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttgggga 39922705  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  39922706 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 39922805  T
Q  317 a 317  Q
    |    
T  39922806 a 39922806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 39084651 - 39084951
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  39084651 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 39084750  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  39084751 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttgggga 39084850  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  39084851 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttggggaagaa 39084950  T
Q  317 a 317  Q
    |    
T  39084951 a 39084951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 39190318 - 39190618
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  39190318 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 39190417  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || || | |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  39190418 tagattcaatttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 39190517  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  39190518 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 39190617  T
Q  317 a 317  Q
    |    
T  39190618 a 39190618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 42879876 - 42879576
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||| ||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | ||||||||    
T  42879876 caacattcaatcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattt 42879777  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  42879776 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 42879677  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  42879676 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 42879577  T
Q  317 a 317  Q
    |    
T  42879576 a 42879576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 43778979 - 43778681
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  | ||||||||| ||   ||||| | ||||||||    
T  43778979 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctccttttgcccatatgaccacctcccatcattt 43778880  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  43778879 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgcaattttttga-ttgggga 43778782  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||    
T  43778781 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggcgaagaa 43778682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 5485551 - 5485851
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||  |||||||||||| |||  |  |||||||| ||   || || | ||||||||    
T  5485551 caacattcaagcactctcacatcaccattaaacatggaggatgaagacgaagcttgactttgatagctctttttgcccatatgaccgcctcccatcattt 5485650  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  5485651 tagattcaatttcaacatttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttgggga 5485750  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  5485751 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacatggtaaaattagggttccaattttatatatttggggaagaa 5485850  T
Q  317 a 317  Q
    |    
T  5485851 a 5485851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 18 - 317
Target Start/End: Complemental strand, 44993399 - 44993100
Alignment:
Q  18 aacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttc 117  Q
    |||||||||||||| |||||||||||||||||||||||  | ||||| || ||||||||| |||  |  |||||||| ||   ||||| | ||||||||     
T  44993399 aacattcaagcactttcacatcaccattaaacatggaggatgaagatgaaacttgactttgatagctctttttgcccatatgaccacctcccatcatttt 44993300  T
Q  118 agattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa 217  Q
    |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||    
T  44993299 agattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaa 44993200  T
Q  218 gaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 317  Q
    |||||| |||  ||||||||| |||||| ||||   |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  44993199 gaacgtgacccttaattattggaagaaaatttgaagattttggagtgtagattacacattgtaaaattaggattccaattttatatatttggggaagaaa 44993100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 187 - 316
Target Start/End: Complemental strand, 13438275 - 13438146
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||    
T  13438275 attagggtttgaagttttttgaattggggaagaaagttaccactaattattggaagaaattttgggaattttggagtgtacattaaagattgtaaaatta 13438176  T
Q  287 gggttccaattttatatatttgaggaagaa 316  Q
    ||||| | |||||||||||||| |||||||    
T  13438175 gggtttctattttatatatttggggaagaa 13438146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 230869 - 230740
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||  |||||||||| || ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||    
T  230869 attagggtttgaaattttttgaattagg-aagaacgttaccactaattattggaagaaattttggggactttggagtgtagattacagattgtaaaatta 230771  T
Q  287 gggttccaattttatatatttgaggaagaaa 317  Q
    || | |||||||||||||||||  |||||||    
T  230770 ggatgccaattttatatatttggagaagaaa 230740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 190 - 306
Target Start/End: Original strand, 25994781 - 25994897
Alignment:
Q  190 agggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattaggg 289  Q
    |||||||| || ||||||||||| ||||||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||| |||| |    
T  25994781 agggtttggagttttttgaattgaggaagaatgttaccactaattattggaagaaattttgaggattttggagtgtagattacagattgtaaatttagag 25994880  T
Q  290 ttccaattttatatatt 306  Q
    |||||||||||||||||    
T  25994881 ttccaattttatatatt 25994897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 32653130 - 32653430
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||| ||||||||||||||||||||||||||| ||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| | ||||||    
T  32653130 caacattcgagcactctcacatcaccattaaacatgaaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccc-cttcattt 32653228  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattgggg 215  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  ||||  |||||||        | |||||||||| |  ||||||| ||||||    
T  32653229 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcatattcaattaaaaaaaaattagggtttgtaattttttgatttgggg 32653328  T
Q  216 aagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 315  Q
    |||||| | |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||  ||||||    
T  32653329 aagaacatgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagtttcaattttatatattttgggaaga 32653428  T
Q  316 aa 317  Q
    ||    
T  32653429 aa 32653430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 321
Target Start/End: Original strand, 4519959 - 4520270
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||| | ||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||   ||||||| ||    
T  4519959 ggacaccaacattcaagcactttgacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatatttccacccc-ca 4520057  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaat--nnnnnnntattagggtttgaagctttttga 208  Q
    |||||||| |||||  || || | |||||||| |||||||||||  ||| |||  |||| ||||||||          |||||||||| ||| |||||||    
T  4520058 tcatttcatattcattttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacaaaaaaaaattagggtttcaagttttttga 4520157  T
Q  209 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 308  Q
    ||||| |||||||   |||||| |||||   | ||||||||||  ||||| ||||||||||| || ||| |  ||||||||||||||||||||||| |||    
T  4520158 attggagaagaactgaaccacttattatcagaggaaattttggtgattttagagtgtagattgcaaattttgtaattagggttccaattttatataattg 4520257  T
Q  309 aggaagaaagagc 321  Q
      |||||||||||    
T  4520258 gcgaagaaagagc 4520270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 39294553 - 39294625
Alignment:
Q  188 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttgg 260  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  39294553 ttagggtttgaagttttttgaattggggaagaacgttaccactaattattggaagaaattttggggattttgg 39294625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 302
Target Start/End: Complemental strand, 44557183 - 44556917
Alignment:
Q  36 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 135  Q
    |||||||||||||| |||||||  ||||| ||||| |||||||||||  | |||| ||| ||  |||||||||||||||||  ||||  | || || | |    
T  44557183 catcaccattaaacttggagctagaagatgaagctcgactttcataacagttttttcccatattcccacccctcatcattttggattttatttcaatagt 44557084  T
Q  136 tttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 235  Q
    ||||||| ||||| |||||  ||| |||  |||  ||||||||        |||||||||||||| ||||||||||||||||||||   |||||| ||||    
T  44557083 tttgcttcaagaatttttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaactggaccacttatta 44556984  T
Q  236 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 302  Q
    ||| | ||||||| ||  ||||| ||||||||||| || |||||  ||||||  |||||||||||||    
T  44556983 ttggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagaattccaattttata 44556917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 321
Target Start/End: Original strand, 27626246 - 27626530
Alignment:
Q  37 atcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatt 136  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||||  | ||||  || ||  |||||||| ||||||||  ||||  | || || | ||    
T  27626246 atcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttgccatattcccaccccccatcattttggattttatttcaatagtt 27626345  T
Q  137 ttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattat 236  Q
    |||||| |||||||||||  ||| |||  |||  ||||||||        |||||||||||||| |||||||||||||||||||    |||||| |||||    
T  27626346 ttgcttcaagaaattttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaattggaccacttattat 27626445  T
Q  237 tgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    || | |||||||     ||||| |||||||||||  | |||||  ||||||||||||||||||||| | ||| ||||||||||||    
T  27626446 tggaggaaatttaaatgattttagagtgtagattgtagattgtgtaattagggttccaattttatacaattggggaagaaagagc 27626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 319
Target Start/End: Complemental strand, 28100977 - 28100865
Alignment:
Q  207 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 306  Q
    ||||||||||||||||||  ||  ||||| || |||||||||||||||||||||| | ||||||| | |||||| |||||| ||| |||||||||| |||    
T  28100977 gaattggggaagaacgttgtcatcaattaatggaagaaattttgggaattttggactctagattataaattgtacaattagagtttcaattttatagatt 28100878  T
Q  307 tgaggaagaaaga 319  Q
    || ||||||||||    
T  28100877 tggggaagaaaga 28100865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 320
Target Start/End: Complemental strand, 51041314 - 51041027
Alignment:
Q  31 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 130  Q
    ||||||||||||||||||| |||||||| ||||| || || ||||||||||| || |||| ||| ||  |||||||  |||||||||| |||||| || |    
T  51041314 tctcacatcaccattaaacttggagcttgaagatgaaactcgactttcataactgttttttcccatattcccaccc--catcatttcatattcaatttca 51041217  T
Q  131 acaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 230  Q
    | | |||||||| ||    |||||  ||| |||| |||| ||||||||         ||||||||||||| ||| ||||| ||||||||||   ||||||    
T  51041216 atagttttgcttcaaatttttttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttatgaataggggaagaaccgaaccact 51041117  T
Q  231 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 320  Q
     ||||  | | |||||  |||  |||||||| |||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||||    
T  51041116 tattaccggaggaaatcatggtgattttggaatgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaaagag 51041027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 319
Target Start/End: Original strand, 13449984 - 13450107
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| ||||||||||||||||||| ||||  | ||||||||| ||||         |||||||||||||| |||| | ||||||||||||    
T  13449984 attagggtttgaagttttttgaattggggaagaatgttaaaaataattattggaaga---------aattttggagtgtacattaaagattgtaaaatta 13450074  T
Q  287 gggttccaattttatatatttgaggaagaaaga 319  Q
    ||||| |||||||||| |||||  |||||||||    
T  13450075 gggtttcaattttatacatttggtgaagaaaga 13450107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 2691818 - 2691684
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||  ||  ||  ||||| || ||||||||||||  |||||| | | ||| | ||| ||| ||| ||||    
T  2691818 attagggttttaagttttttgaattggggaagaattttgtcatcaattaatggaagaaattttggagattttgaactctaggtgacaaattataacatta 2691719  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||||||||||| ||||||||||||    
T  2691718 gggttccaaatttatatatttggggaagaaagagc 2691684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 20820423 - 20820290
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||| ||| ||| |||||||||||| ||||||| ||  ||  ||||| || ||||||||||||| |||||  | | ||| | ||| ||| ||||||||    
T  20820423 attaggtttttaagttttttgaattggagaagaactttgtcatcaattagtggaagaaattttggggattttaaactttaggtgacaaattataaaatta 20820324  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||||||||| |||||||||    
T  20820323 gggttccaaatttatatatttgagaaagaaagag 20820290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 370
Target Start/End: Original strand, 39294645 - 39294721
Alignment:
Q  294 aattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtca 370  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||   | ||||||||||||||||    
T  39294645 aattttatatatttggggaagaaagagaaaagcattttctgcaaatcaatcaatttagcctttggaaattttggtca 39294721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 315
Target Start/End: Original strand, 47942413 - 47942541
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  47942413 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 47942512  T
Q  287 gggttccaattttatatatttgaggaaga 315  Q
    |||||||||||||||| | ||| ||||||    
T  47942513 gggttccaattttatacaattggggaaga 47942541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 54387537 - 54387670
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||| | |||||| | | ||| | ||| ||||||| ||||    
T  54387537 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttgaggattttgaactctaggtgacaaattgtaacatta 54387636  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||||||  || ||||||||    
T  54387637 gggttccaaatttatatatttagggcagaaagag 54387670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 321
Target Start/End: Original strand, 35997284 - 35997568
Alignment:
Q  43 attaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgctt 142  Q
    ||||||| || ||||| ||||| ||||| ||||||| |||  | |||| ||| ||  |||||||| ||||||||||||||||| || || | ||||||||    
T  35997284 attaaacttgcagcttgaagatgaagctcgactttcttaacagttttttcccatattcccaccccccatcatttcagattcaatttcaatagttttgctt 35997383  T
Q  143 gaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa------gaacgttaccactaattat 236  Q
     |||||||||||  ||| |||  |||| ||||||||         ||||||||| ||| ||||| ||||||||||      ||||   |||||| |||||    
T  35997384 caagaaattttgtggattttggctttcagattcaatacgaaaaatttagggtttcaagttttttaaattggggaagaactggaactggaccacttattat 35997483  T
Q  237 tgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    || | ||||||| ||  || || || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  35997484 tggaggaaatttaggttatattagaatgtagattgcagattgtgtaattagggttccaattttatacaattggggaagacagagc 35997568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 10544498 - 10544605
Alignment:
Q  18 aacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttc 117  Q
    ||||||||| || ||| ||||||||||||||||| |||||| ||||| ||| | |||||| | || || |||||||| ||| |||||| | |||||||||    
T  10544498 aacattcaaacattctgacatcaccattaaacatagagcttgaagatgaagttcgactttgagaactgtttttgcccatacgcccaccacccatcatttc 10544597  T
Q  118 agattcaa 125  Q
    | ||||||    
T  10544598 atattcaa 10544605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 44793358 - 44793243
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | |||||||  |  || || || ||||||||| | |||||  |||||    
T  44793358 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttatgtgatattagaatgtagattatagattgtgtaatta 44793259  T
Q  287 gggttccaattttata 302  Q
    ||||||||||||||||    
T  44793258 gggttccaattttata 44793243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 11254512 - 11254378
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    ||||||||||  || |||||||||||||||||||| ||  ||  ||||| || ||||| ||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  11254512 attagggttttgagttttttgaattggggaagaacattgacatcaattaatggaagaattttgggggattttgaactctaggtgacaaattataacatta 11254413  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||| ||| |||||||||||| ||||||||||||    
T  11254412 gggtttcaaatttatatatttggggaagaaagagc 11254378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 315
Target Start/End: Original strand, 10544693 - 10544778
Alignment:
Q  230 taattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 315  Q
    |||||| || ||||||||||||| |||||||| ||||||  |   |||| ||||||||||||||||||||||| ||||| ||||||    
T  10544693 taattaatggaagaaattttggggattttggactgtagacgagggattgaaaaattagggttccaattttatagatttggggaaga 10544778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 321
Target Start/End: Original strand, 26397635 - 26397715
Alignment:
Q  240 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||||||| |||||| | | ||||| ||| ||| |||| ||||||||| ||||||||| ||||||||||||||||||    
T  26397635 aagaaattttggggattttgaactctagatgacaaattataaa-ttagggttctaattttatagatttgaggaagaaagagc 26397715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 49524394 - 49524527
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | |  || | ||| ||| ||| ||||    
T  49524394 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactccaggtgacaaattataacatta 49524493  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||| ||| |||||||||||    
T  49524494 gggttccaaatttatatacttggggaagaaagag 49524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 35402202 - 35402069
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| ||||| |||||||||||||| ||  ||  ||||  || ||||||||| ||| |||| | | | ||| | ||| ||| ||| ||||    
T  35402202 attagggttttaagtttttttaattggggaagaacattgacatcaattcatggaagaaatttgggggattt-gaactctaggtgacaaattataacatta 35402104  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||||||||||| ||||||||||||    
T  35402103 gggttccaaatttatatatttggggaagaaagagc 35402069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 27385940 - 27385980
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacat 51  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  27385940 ggacaccaacattcaagtactctcacatcaccattaaacat 27385980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 230728 - 230650
Alignment:
Q  294 aattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcact 372  Q
    ||||||||||| ||| |||||||| ||||||||||||||  |||||||   || ||  |||||||||||| ||||||||    
T  230728 aattttatataattggggaagaaaaagcaaagcattttcagcaaatcagccaaattagtccttggaaattatggtcact 230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 25994708 - 25994765
Alignment:
Q  121 ttcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaat 178  Q
    ||||| ||||||| ||||||||||||||||||||| |||  ||  |||||||||||||    
T  25994708 ttcaatttgaacagttttgcttgaagaaattttggggattctggttttcggattcaat 25994765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 28101179 - 28101122
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaag 68  Q
    ||||| ||| |||||||||| ||||||||||||||| |||| |||||| ||||| |||    
T  28101179 ggacaccaatattcaagcaccctcacatcaccattatacatagagcttgaagatgaag 28101122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 42982211 - 42982248
Alignment:
Q  283 attagggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  42982211 attagggttccaaatttatatatttggggaagaaagag 42982248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 20494182 - 20494146
Alignment:
Q  284 ttagggttccaattttatatatttgaggaagaaagag 320  Q
    |||||||||||| |||||||||||| |||||||||||    
T  20494182 ttagggttccaaatttatatatttggggaagaaagag 20494146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 4e-54; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 17951152 - 17950853
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||||||  |   ||||| | ||||||||    
T  17951152 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccaaatgaccacctcccatcattt 17951053  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  17951052 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgtaattttttgatttgggga 17950954  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  17950953 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 17950854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 35174974 - 35174674
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    ||||||||| ||||||||| |||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||    |||| | ||| ||||    
T  35174974 caacattcaggcactctcatatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgatcacctcccattattt 35174875  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  35174874 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 35174775  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  35174774 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaa 35174675  T
Q  317 a 317  Q
    |    
T  35174674 a 35174674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 23 - 319
Target Start/End: Original strand, 17936042 - 17936339
Alignment:
Q  23 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgctttt-gcccttacacccacccctcatcatttcagat 121  Q
    ||||||| ||| |||||||||||||||||  |  || ||||| ||||| |||||| | || || |||| |||| |||  ||||| | ||||||||| |||    
T  17936042 tcaagcattctgacatcaccattaaacataaattttgaagatgaagctcgactttgagaactgttttttgcccatacgtccaccacccatcatttcggat 17936141  T
Q  122 tcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaac 221  Q
    ||||  ||||||||||||||||||    |||||| ||| ||| ||||| ||||||||        |||||||||||||| |||| ||| | || || |||    
T  17936142 tcaatctgaacaattttgcttgaattttttttggggattttggatttcagattcaatcaaaacaaattagggtttgaagtttttagaagtaggcaataac 17936241  T
Q  222 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 319  Q
    |||  || |||||| || |||||||||||||||||||||| ||||||||| | |||| |||||||||||| |||||||||| ||||||||||||||||    
T  17936242 gttgtcattaattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggtttcaattttatagatttgaggaagaaaga 17936339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 34344824 - 34345123
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||| | |||||||||||| |||  |  |||||||| ||   |||||||  |||||||    
T  34344824 caacattcaagcactctcacatcaccattaaacatggaggatgaagttgaagcttgactttgatagctctttttgcccatatgaccacccca-atcattt 34344922  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||| ||  |||||||  ||| |||  ||||  || ||||        ||||||||||| |  ||||| | | |||||    
T  34344923 tagattcaatttcaacacttttgcttaaatgaattttgcagattttggttttcatatccaattaaaaaaaattagggtttgcaatttttttattcgggga 34345022  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| ||||   |||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  34345023 agaacgtgacccttaattattggaagaaaatttgaagattttggagtgtagattacacattgtaaagttagggttccaattttatatattttaggaagaa 34345122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 4289838 - 4289710
Alignment:
Q  189 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 288  Q
    ||||||||| |  ||||||| |||||||||||||| |||  ||||||||| |||||| |||||  |||||||||| ||||||||| ||||||||||||||    
T  4289838 tagggtttgcaattttttgatttggggaagaacgtgacccttaattattggaagaaaatttggagattttggagtatagattacacattgtaaaattagg 4289739  T
Q  289 gttccaattttatatatttgaggaagaaa 317  Q
     ||||||||||||||||||| ||||||||    
T  4289738 attccaattttatatatttggggaagaaa 4289710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 368
Target Start/End: Original strand, 31210129 - 31210313
Alignment:
Q  195 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 294  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| |  | ||||| |  |||||||||||||||||||| |||||||||||||| || ||    
T  31210129 ttgaagttttttgaattggggaagaaagttaccactaattattggataatatttttgagattttggagtgtagattacagattgtaaaattaggttttca 31210228  T
Q  295 atttt--------atata---tttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggt 368  Q
    || ||        | |||    |||||| ||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||    
T  31210229 atatttggggaagaaataaccgttgagggagaaagagcaaagcattttctacaaatcaatcaatttagtccttgaaaattttggt 31210313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 33277234 - 33277101
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| |||  |  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| |||||| |    
T  33277234 attagggttttaagttttttgaattggggaagaactttaatatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataaaatca 33277135  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| ||||||||||||| |||||||||||    
T  33277134 gggttccaaatttatatatttga-gaagaaagagc 33277101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 7371586 - 7371453
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  7371586 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 7371487  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| |||||||||||| |||||||||||    
T  7371486 gggttccaaatttatatatttggggaagaaagag 7371453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 30640027 - 30639903
Alignment:
Q  195 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 294  Q
    |||||| ||||||||||  ||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||  ||||| |||||||    
T  30640027 ttgaagttttttgaattatggaagaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattatggttcca 30639928  T
Q  295 attttatatatttgaggaagaaaga 319  Q
    |||||||| | || |||||||||||    
T  30639927 attttatacaattaaggaagaaaga 30639903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 11356803 - 11356922
Alignment:
Q  202 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 301  Q
    |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||    
T  11356803 tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtaacaaattataacattagggttccaaatttat 11356902  T
Q  302 atatttgaggaagaaagagc 321  Q
    ||||||| ||||||||||||    
T  11356903 atatttggggaagaaagagc 11356922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 33267419 - 33267342
Alignment:
Q  240 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 317  Q
    ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||||||||||| ||| |||||||| ||||||||    
T  33267419 aagaaattttggggattttgaactctaggtgacaaattataacattagggttccaaatttgtatatttggggaagaaa 33267342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 14338061 - 14337985
Alignment:
Q  231 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 307  Q
    ||||| || ||||||||||||| |||||| | | ||  | ||| ||| ||||||||||||||||| |||||||||||    
T  14338061 aattaatggaagaaattttggggattttgaactctatgtgacaaattataaaattagggttccaaatttatatattt 14337985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 187 - 321
Target Start/End: Original strand, 1344478 - 1344612
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||||| | ||||||||||||    
T  1344478 attagggtttgaagttttttgaattggggaagaacgttaccaccaattattggaagaaattttggagattttggagtgtagattaaagattgtaaaatta 1344577  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    |||||||||||||||||||||  ||||||||||||    
T  1344578 gggttccaattttatatatttagggaagaaagagc 1344612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 42619875 - 42619581
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||  ||   |||    ||| ||   ||||||| ||||||||    
T  42619875 caacattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttggta---gctc---cccatatgaccaccccccatcattt 42619782  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
     |||||||| || |||| |||||||||||  |||||||  ||| |||  |||| ||||||||        ||||||||||| |  ||||||| |||||||    
T  42619781 tagattcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttgggga 42619682  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 316  Q
    ||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||| ||||| |||||||    
T  42619681 agaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaa 42619582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 24497749 - 24497874
Alignment:
Q  192 ggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggtt 291  Q
    ||||||||| |||||||||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  24497749 ggtttgaaggtttttgaattggggaagaacgttatcattgattattggaagaaattttgggaattttggagtgtagattacttattgtaaaattagagtt 24497848  T
Q  292 ccaattttatatatttgaggaagaaa 317  Q
     |||||||||||||||  ||||||||    
T  24497849 tcaattttatatatttagggaagaaa 24497874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 321
Target Start/End: Complemental strand, 18727164 - 18726853
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||| ||||||||||  | |||| ||  ||  |||||||| ||    
T  18727164 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagctttactttcataaccgttttttcctatattcccaccccaca 18727065  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 209  Q
    ||||||||||||||| || || | | |||||| |||||||||||  ||| |||  |||  |||||| |         |||||||||||||| ||||||||    
T  18727064 tcatttcagattcaatttcaatagtcttgcttcaagaaattttgaggattttggctttgagattcactacgaaaaaaattagggtttgaagttttttgaa 18726965  T
Q  210 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 309  Q
    |||||| |||||   |||||| ||||||| |  |||||||    ||| | |||||||||||||| |||||  ||||||||||||||||||||| | |||     
T  18726964 ttggggcagaactgaaccacttattattggagaaaattttcatgattatagagtgtagattacagattgtgtaattagggttccaattttatacaattgg 18726865  T
Q  310 ggaagaaagagc 321  Q
    ||||||||||||    
T  18726864 ggaagaaagagc 18726853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 321
Target Start/End: Complemental strand, 38177225 - 38176923
Alignment:
Q  19 acattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttca 118  Q
    ||||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| ||||||||||    
T  38177225 acattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttca 38177126  T
Q  119 gattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaag 218  Q
    ||||||| || || | |||||||| |||||||||||  ||| |||  ||||  |||||||        |||||||||||||| |||||||||||||||||    
T  38177125 gattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaag 38177026  T
Q  219 aacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 318  Q
    |||   |||| | || |||| | || ||||||| |||||| ||||||| |||    |||||  ||||||||||||||| ||||| | ||| |||||||||    
T  38177025 aactggaccatttataattggaggatattttggtaattttagagtgtaaattgttgattgtgtaattagggttccaatgttatacaattggggaagaaag 38176926  T
Q  319 agc 321  Q
    |||    
T  38176925 agc 38176923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 321
Target Start/End: Complemental strand, 38204449 - 38204147
Alignment:
Q  19 acattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttca 118  Q
    ||||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| ||||||||||    
T  38204449 acattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttca 38204350  T
Q  119 gattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaag 218  Q
    ||||||| || || | |||||||| |||||||||||  ||| |||  ||||  |||||||        |||||||||||||| |||||||||||||||||    
T  38204349 gattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaag 38204250  T
Q  219 aacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 318  Q
    |||   |||| | || |||| | || ||||||| |||||| ||||||| |||    |||||  ||||||||||||||| ||||| | ||| |||||||||    
T  38204249 aactggaccatttataattggaggatattttggtaattttagagtgtaaattgttgattgtgtaattagggttccaatgttatacaattggggaagaaag 38204150  T
Q  319 agc 321  Q
    |||    
T  38204149 agc 38204147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 11 - 317
Target Start/End: Complemental strand, 35291644 - 35291343
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||| ||||| || |||||||||||||| || |||| ||| ||  |||||||| ||    
T  35291644 ggacaccaacattcaagcactatcacatcaccattaaacttggagcttgaagatgaaacttgactttcataactgttttttcccatattcccacccc-ca 35291546  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 210  Q
    ||||||||||| ||| || || | |||||||| |||||||||||  ||| ||||  |||  |||||||         ||||||||||||| ||| |||||    
T  35291545 tcatttcagatccaatttcaatagttttgcttcaagaaattttgaggattttgacattcaaattcaatgcaaaaa-gttagggtttgaagttttgtgaat 35291447  T
Q  211 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 310  Q
    |||||||||||   |||||| |||| || | ||||||||||  ||||||||||||||||| |   ||||  ||| |||||| |||||||||| | ||| |    
T  35291446 tggggaagaaccggaccacttattactggaggaaattttggtgattttggagtgtagattgc---ttgtgtaatcagggtttcaattttatacaattggg 35291350  T
Q  311 gaagaaa 317  Q
    |||||||    
T  35291349 gaagaaa 35291343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 11 - 302
Target Start/End: Original strand, 40330004 - 40330296
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||  || ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| ||    
T  40330004 ggacaccaacattcaagcactctcacatcaccattaaacttggaaattgaagatgaagctcgactttcataactattttttcccatatttccacccccca 40330103  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 209  Q
    |||||||||| |||| || || | |||||||| ||||||||||   ||| |||  ||||  |||||||         |||||||||| ||| || |||||    
T  40330104 tcatttcagaatcaatttcaatagttttgcttcaagaaattttcaagattttggctttcatattcaatacggaaaaaattagggtttcaagtttgttgaa 40330203  T
Q  210 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 302  Q
    |||||||||| |   |||||| ||||||| | |||||||| |  ||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  40330204 ttggggaagagctggaccacttattattggaggaaatttttgtgattttggagtgtagattgcatattgtgtaattagggttccaattttata 40330296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 187 - 319
Target Start/End: Complemental strand, 1343614 - 1343482
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    ||||||||||| || ||||| |||||||||| |||||||||||||| ||||| ||||||||||||  |||||||||||||| ||| | ||| ||||||||    
T  1343614 attagggtttggagttttttaaattggggaaaaacgttaccactaactattggaagaaattttggagattttggagtgtagtttaaagattataaaatta 1343515  T
Q  287 gggttccaattttatatatttgaggaagaaaga 319  Q
    ||||  |||||||||||||||  ||||||||||    
T  1343514 gggtgtcaattttatatatttagggaagaaaga 1343482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 321
Target Start/End: Original strand, 32089411 - 32089725
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | |||| ||| ||  |||||||| ||    
T  32089411 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccgttttttcccatattcccaccccaca 32089510  T
Q  111 tcattt--cag-attcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaat-nnnnnnntattagggtttgaagcttttt 206  Q
    ||||||   || |||||| || || | |||||||| |||||||||||  ||| |||  |||| |||||| |         |||||||||||||| |||||    
T  32089511 tcattttgaagtattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcactacgaaaaaaattagggtttgaagtttttt 32089610  T
Q  207 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 306  Q
    ||||||||| |||||   ||| || ||||||| |  |||||||    ||| | ||||||||||| || |||||  ||||||||||||||||||||| | |    
T  32089611 gaattggggcagaactgaacctcttattattggagtaaattttcatgattatagagtgtagattgcagattgtgtaattagggttccaattttatacaat 32089710  T
Q  307 tgaggaagaaagagc 321  Q
    || ||||||||||||    
T  32089711 tggggaagaaagagc 32089725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 317
Target Start/End: Original strand, 27350095 - 27350322
Alignment:
Q  87 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttga-atttcggattcaatnnnnnnn 185  Q
    |||||||| |||||||||||| |||||||||  |||||| |  |||| ||||| ||||||||||||||| ||| ||   |||| |||||||||           
T  27350095 ttttgcccatacacccacccc-catcatttcttattcaattacaacagttttgtttgaagaaattttggggatttttttattttggattcaataaaaaa- 27350192  T
Q  186 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 285  Q
     | |||||||||| | | ||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||  |||| | ||| |||||||    
T  27350193 -aatagggtttgaggttatttcaattggggatgaacgttac-actaattattgaaagaatttttgggaattttggcgtgtgaattaaagattataaaatt 27350290  T
Q  286 agggttccaattttatatatttgaggaagaaa 317  Q
    ||||||||||||||||| ||||| | ||||||    
T  27350291 agggttccaattttatacatttgggaaagaaa 27350322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 43317329 - 43317186
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || ||||  || ||  |||||||| ||    
T  43317329 ggacaccaacattcaagcactctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgtttttttccatattcccacccccca 43317230  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttg 154  Q
    ||||||||||| ||| || |  | |||||||| |||||||||||    
T  43317229 tcatttcagatccaatttcactagttttgcttcaagaaattttg 43317186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 302
Target Start/End: Complemental strand, 32836470 - 32836186
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 116  Q
    ||||||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| || |||| | | ||  |||||||| ||||||||    
T  32836470 caacattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactgttttttcacatattcccacccc-catcattt 32836372  T
Q  117 cagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattgggga 216  Q
    ||||||||| || || | |||||||| || |  |||||  ||| |||  |||   |||||||        |||||||||||||| |||||||||||||||    
T  32836371 cagattcaatttcaatagttttgcttcaaaattttttgaggattttggcttttaaattcaatacgaaaaaattagggtttgaagttttttgaattgggga 32836272  T
Q  217 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 302  Q
    ||||| | |||| | ||  ||| | || |||||||  |||||  |||||| ||| || |||||  ||||||||||||||| |||||    
T  32836271 agaacttgaccatttatatttggaggatattttggtgattttatagtgtaaattgcagattgtgtaattagggttccaatgttata 32836186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 321
Target Start/End: Original strand, 6116465 - 6116700
Alignment:
Q  87 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnnt 186  Q
    |||||||  |||||||| | | ||||||||| ||||||| |||||||||||||  |||||||||||||| ||| ||| |||||  |||||||            
T  6116465 ttttgcctatacacccatcacccatcatttcggattcaatttgaacaattttgaatgaagaaattttggggattttggatttcatattcaatcaaaacaa 6116564  T
Q  187 a--ttagggtttgaagctttttgaattggggaagaac--gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaa 282  Q
    |  ||||||||||||| |||| ||||  ||||||||   |||     |||||| || ||||||||||||| ||||| || ||||||||| | |||| |||    
T  6116565 aaattagggtttgaagtttttagaatcagggaagaaatggttgt---taattaatggaagaaattttggggatttttgactgtagattagagattgaaaa 6116661  T
Q  283 attagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||||||||| ||||| ||||||||||||    
T  6116662 attagggtttcaattttatagatttggggaagaaagagc 6116700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 18341593 - 18341737
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 110  Q
    ||||| ||||||||||||| ||| |||||||| |||||||| ||| || | ||| |||||  | ||| | || || |||||||| |||  ||||| | ||    
T  18341593 ggacaccaacattcaagcattcttacatcaccgttaaacatagagtttgaggatgaagctcaagtttgagaactgtttttgcccatacgaccaccaccca 18341692  T
Q  111 tcatttcagattcaaattgaacaattttgcttgaagaaattttgg 155  Q
    |||||||||||||||  |||||||||||| |||||||||||||||    
T  18341693 tcatttcagattcaatctgaacaattttgattgaagaaattttgg 18341737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 18623899 - 18623765
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||  ||| ||| ||||    
T  18623899 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgtaagaaattttggggattttgaactctaggtgacgaattataacatta 18623800  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| |||||||||||| ||||||||||||    
T  18623799 gggttccaaatttatatatttggggaagaaagagc 18623765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 32134690 - 32134556
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  32134690 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactataggtgacaaattataacatta 32134591  T
Q  287 gggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| ||||||||||||  |||||||||||    
T  32134590 gggttccaaatttatatatttgtagaagaaagagc 32134556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 34328466 - 34328600
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttggga-attttggagtgtagattacatattgtaaaatt 285  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||||||||||||  |||||| | | |||   ||| ||| ||| |||    
T  34328466 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaattttgggggattttgaactctaggcgacaaattataatatt 34328565  T
Q  286 agggttccaattttatatatttgaggaagaaagag 320  Q
    |||||||||| |||||||||||| |||||||||||    
T  34328566 agggttccaaatttatatatttggggaagaaagag 34328600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 302
Target Start/End: Original strand, 35400226 - 35400489
Alignment:
Q  39 caccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatttt 138  Q
    ||||||||||| ||||| || ||||| || ||||||||||| ||    |||| ||| ||  |||||||| ||||||||||||||||| || || | ||||    
T  35400226 caccattaaacttggagtttgaagatgaaacttgactttcaaaacctttttttcccatattcccaccccccatcatttcagattcaatttcaatagtttt 35400325  T
Q  139 gcttgaagaaattttggtgatcttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattg 238  Q
    |||| |||||||||||  ||| |||  |||| || ||| |        | |  ||||||||| ||||| |||||||  ||||    |||||| |||||||    
T  35400326 gcttcaagaaattttgaggattttggctttcagactcactacgaaaaaaattaggtttgaagttttttaaattgggacagaattggaccacttattattg 35400425  T
Q  239 aaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 302  Q
     | ||||||||   |||| | ||||||||||| ||||||||  |||||||||||||||||||||    
T  35400426 gaggaaattttcataattatagagtgtagattgcatattgtgtaattagggttccaattttata 35400489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 12738337 - 12738470
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  12738337 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 12738436  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| ||||||| |||  |||||||||||    
T  12738437 gggttccaaatttatatgtttagggaagaaagag 12738470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 12801160 - 12801293
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  12801160 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 12801259  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||| ||||||| |||  |||||||||||    
T  12801260 gggttccaaatttatatgtttagggaagaaagag 12801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 27077123 - 27077256
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||| ||||||| |||||||||||||||||||||||  ||  ||||| || |||||||||| |  |||||| | | |   | ||| ||| ||||||||    
T  27077123 attaggttttgaagttttttgaattggggaagaacgttgtcatcaattaatggaagaaattttagagattttgaactctcagtgacaaattataaaatta 27077222  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    |||||||||| ||||  ||||| |||||||||||    
T  27077223 gggttccaatgttatggatttggggaagaaagag 27077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 33257426 - 33257559
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||||||| |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||| ||| || |||||  ||| |    
T  33257426 attagggtttgaagttttttgaattggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtatattgcagattgtgtaatca 33257525  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||| |||||||||| | ||| |||||||||||    
T  33257526 gggttacaattttatacaattggggaagaaagag 33257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 33257262 - 33257309
Alignment:
Q  11 ggacatcaacattcaagcactctcacatcaccattaaacatggagctt 58  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  33257262 ggacaccaacattcaagcactctcacaacaccattaaacttggagctt 33257309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 372
Target Start/End: Original strand, 24497885 - 24497947
Alignment:
Q  310 ggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcact 372  Q
    ||||||||||||||| |||||| | ||||||||| |||||| |||||| |||||||| |||||    
T  24497885 ggaagaaagagcaaaacattttatgcaaatcaatcaatttggtccttgtaaattttgatcact 24497947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 308
Target Start/End: Complemental strand, 41494285 - 41494167
Alignment:
Q  190 agggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattaggg 289  Q
    ||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||| |||    
T  41494285 agggttttaagttttttgaattggggaagaactttgtcatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacattcggg 41494186  T
Q  290 ttccaattttatatatttg 308  Q
    |||||| ||||||||||||    
T  41494185 ttccaaatttatatatttg 41494167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 30464344 - 30464263
Alignment:
Q  240 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  30464344 aagaaatttgggggattttgaactctaggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagc 30464263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 320
Target Start/End: Complemental strand, 28035852 - 28035772
Alignment:
Q  240 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 320  Q
    |||||||||||| ||||||  | |||| |||| | |||| ||| ||| |||| ||||||||||||| ||||||||||||||    
T  28035852 aagaaattttggaaattttaaactgtaaattagagattgaaaagttaaggtttcaattttatatatctgaggaagaaagag 28035772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 27076963 - 27077010
Alignment:
Q  17 caacattcaagcactctcacatcaccattaaacatggagcttaaagat 64  Q
    ||||||||||| |||||||||||||||||||| || |||||| |||||    
T  27076963 caacattcaagtactctcacatcaccattaaaaatagagcttgaagat 27077010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 321
Target Start/End: Original strand, 28821770 - 28821860
Alignment:
Q  231 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||| || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||||||| ||| |||||||||||| ||||||||||||    
T  28821770 aattaatggaagaaatttgggggattttgaactctaggtgacaaattataacattagggtttcaaatttatatatttggggaagaaagagc 28821860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 317
Target Start/End: Complemental strand, 29620529 - 29620495
Alignment:
Q  283 attagggttccaattttatatatttgaggaagaaa 317  Q
    ||||||||||||| |||||||||||||||||||||    
T  29620529 attagggttccaaatttatatatttgaggaagaaa 29620495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 319
Target Start/End: Original strand, 8541036 - 8541072
Alignment:
Q  283 attagggttccaattttatatatttgaggaagaaaga 319  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  8541036 attagggttccaaatttatatatttggggaagaaaga 8541072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 19998149 - 19998229
Alignment:
Q  240 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 320  Q
    ||||||||||| |||||||  | | ||| | ||| ||| ||||||||||||| | |||||||| ||||| |||||||||||    
T  19998149 aagaaattttgagaattttaaactctaggtgacaaattataaaattagggtttccattttatagatttggggaagaaagag 19998229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 87 - 315
Target Start/End: Original strand, 37856 - 38082
Alignment:
Q  87 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgatcttga-atttcggattcaatnnnnnnn 185  Q
    |||||||| ||||||||||| |||||||||||||||||| |  |||| ||||| |||||| |||||||| ||| ||   ||||||||||||||           
T  37856 ttttgcccatacacccaccc-tcatcatttcagattcaattacaacagttttgtttgaaggaattttggggattttttgatttcggattcaatcaaaaa- 37953  T
Q  186 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 285  Q
     |||||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||    
T  37954 -attagggtttgaggttatttcaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatt 38052  T
Q  286 agggttccaattttatatatttgaggaaga 315  Q
    ||||||||||||||||| ||||| ||||||    
T  38053 agggttccaattttatacatttggggaaga 38082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 321
Target Start/End: Complemental strand, 57802 - 57669
Alignment:
Q  189 tagggtttgaagctttttgaattgg-ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 287  Q
    |||||||||||| |||||||||| | ||||||| ||||||||| ||||||  ||||||||||||  |||||||||||||||||||| || ||| ||| ||    
T  57802 tagggtttgaagttttttgaattagaggaagaatgttaccacttattattcgaagaaattttggttattttggagtgtagattacagatagtataatcag 57703  T
Q  288 ggttccaattttatatatttgaggaagaaagagc 321  Q
    |||| |||||||||||||||| ||||||||||||    
T  57702 ggtttcaattttatatatttggggaagaaagagc 57669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 321
Target Start/End: Original strand, 2643 - 2710
Alignment:
Q  254 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||| ||||||||||||    
T  2643 attttggagtgtagattacatatagtataattagagttccagttttatatatttggggaagaaagagc 2710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 2423 - 2356
Alignment:
Q  254 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 321  Q
    |||||||||||||||||||  || ||| ||| ||||||||||||||||||||||| ||||||||||||    
T  2423 attttggagtgtagattactgatagtataatgagggttccaattttatatatttggggaagaaagagc 2356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 321
Target Start/End: Complemental strand, 4574 - 4446
Alignment:
Q  192 ggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggtt 291  Q
    ||||||||| |||| | |||| |||||||||||  ||  ||||| || ||||| ||||||  |||||  | | ||||| ||| ||||||||||||| |||    
T  4574 ggtttgaagtttttagcattgaggaagaacgttgtcatcaattaatggaagaa-ttttggagattttaaactctagatgacaaattgtaaaattagagtt 4476  T
Q  292 ccaattttatatatttgaggaagaaagagc 321  Q
    ||||||||||| ||||||| ||||||||||    
T  4475 ccaattttatagatttgagaaagaaagagc 4446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 9533 - 9666
Alignment:
Q  187 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 286  Q
    |||||||||| ||| |||||||||||||||| ||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  9533 attagggttttaagttttttgaattggggaaaaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 9632  T
Q  287 gggttccaattttatatatttgaggaagaaagag 320  Q
    ||||| ||| |||||||||||| |||||||||||    
T  9633 gggtttcaaatttatatatttggggaagaaagag 9666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 1164 - 1283
Alignment:
Q  202 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 301  Q
    |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||    
T  1164 tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtaacaaattataacattagggttccaaatttat 1263  T
Q  302 atatttgaggaagaaagagc 321  Q
    ||||||| ||||||||||||    
T  1264 atatttggggaagaaagagc 1283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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