View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11008_low_23 (Length: 369)

Name: NF11008_low_23
Description: NF11008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11008_low_23
NF11008_low_23
[»] chr5 (28 HSPs)
chr5 (1-338)||(38177964-38178291)
chr5 (1-338)||(38205188-38205515)
chr5 (76-344)||(18728467-18728725)
chr5 (76-344)||(32087515-32087773)
chr5 (76-344)||(33256401-33256659)
chr5 (76-335)||(43317934-43318183)
chr5 (76-335)||(35292256-35292504)
chr5 (76-319)||(35395334-35395565)
chr5 (148-297)||(38597012-38597157)
chr5 (209-331)||(32838378-32838500)
chr5 (76-193)||(38596869-38596980)
chr5 (1-67)||(38156936-38157002)
chr5 (139-294)||(24496801-24496952)
chr5 (142-303)||(17574379-17574535)
chr5 (1-56)||(38221269-38221325)
chr5 (241-303)||(7267998-7268060)
chr5 (142-203)||(7267904-7267965)
chr5 (142-203)||(30468282-30468343)
chr5 (142-203)||(34327696-34327757)
chr5 (142-203)||(36057615-36057676)
chr5 (76-136)||(32835877-32835937)
chr5 (1-45)||(38167978-38168022)
chr5 (1-45)||(38199082-38199126)
chr5 (76-136)||(42619290-42619350)
chr5 (144-203)||(29621783-29621842)
chr5 (142-187)||(24541230-24541275)
chr5 (76-172)||(40330515-40330605)
chr5 (227-303)||(18624914-18624990)
[»] chr2 (37 HSPs)
chr2 (76-338)||(37417274-37417526)
chr2 (76-344)||(25619661-25619919)
chr2 (139-344)||(39262-39463)
chr2 (76-344)||(15432329-15432587)
chr2 (139-344)||(92212-92413)
chr2 (76-335)||(29909534-29909783)
chr2 (79-289)||(42879360-42879559)
chr2 (76-335)||(41706540-41706789)
chr2 (76-335)||(15372500-15372749)
chr2 (76-333)||(42001611-42001856)
chr2 (144-203)||(11315337-11315396)
chr2 (79-203)||(39560-39678)
chr2 (227-303)||(14389010-14389086)
chr2 (144-303)||(39664674-39664829)
chr2 (142-203)||(16763137-16763198)
chr2 (137-303)||(42519131-42519293)
chr2 (240-303)||(6797662-6797725)
chr2 (240-303)||(10716809-10716872)
chr2 (142-303)||(40560284-40560441)
chr2 (90-132)||(25620611-25620653)
chr2 (284-333)||(39723-39772)
chr2 (142-203)||(44709767-44709828)
chr2 (76-136)||(41172-41232)
chr2 (142-303)||(19908172-19908329)
chr2 (139-203)||(24208064-24208128)
chr2 (240-303)||(16763230-16763293)
chr2 (145-203)||(6786003-6786061)
chr2 (145-203)||(37020572-37020630)
chr2 (142-203)||(2766995-2767056)
chr2 (76-172)||(11021534-11021624)
chr2 (242-303)||(11315263-11315324)
chr2 (142-203)||(14389106-14389167)
chr2 (238-335)||(17946247-17946344)
chr2 (76-136)||(33194-33254)
chr2 (76-136)||(37418799-37418859)
chr2 (76-136)||(42880841-42880901)
chr2 (227-303)||(44709671-44709747)
[»] chr8 (36 HSPs)
chr8 (76-335)||(42897648-42897897)
chr8 (76-334)||(37525898-37526146)
chr8 (76-333)||(1320618-1320865)
chr8 (76-351)||(38882655-38882920)
chr8 (76-349)||(32822362-32822624)
chr8 (80-338)||(33160019-33160267)
chr8 (139-349)||(33750244-33750450)
chr8 (76-344)||(462237-462493)
chr8 (139-344)||(8654558-8654758)
chr8 (76-335)||(31201017-31201266)
chr8 (76-344)||(31821419-31821667)
chr8 (143-316)||(9184445-9184614)
chr8 (142-203)||(13108358-13108419)
chr8 (142-303)||(38547289-38547445)
chr8 (85-136)||(461186-461237)
chr8 (240-303)||(13108263-13108326)
chr8 (76-186)||(25373608-25373712)
chr8 (145-303)||(5036509-5036667)
chr8 (142-203)||(8609809-8609870)
chr8 (240-303)||(8609714-8609777)
chr8 (90-136)||(37524873-37524919)
chr8 (145-303)||(9673091-9673245)
chr8 (142-203)||(13282539-13282600)
chr8 (142-203)||(13486121-13486182)
chr8 (142-203)||(26242336-26242397)
chr8 (142-203)||(27691215-27691276)
chr8 (142-203)||(41825666-41825727)
chr8 (226-286)||(11722732-11722792)
chr8 (76-136)||(38881429-38881489)
chr8 (139-186)||(25707287-25707334)
chr8 (145-203)||(15305861-15305919)
chr8 (145-203)||(15486230-15486288)
chr8 (145-203)||(41042606-41042664)
chr8 (76-172)||(33748333-33748423)
chr8 (247-303)||(28433643-28433699)
chr8 (227-303)||(41825570-41825646)
[»] chr3 (52 HSPs)
chr3 (76-338)||(48633878-48634136)
chr3 (76-338)||(23774153-23774404)
chr3 (76-332)||(18430148-18430394)
chr3 (76-344)||(45257085-45257343)
chr3 (76-338)||(31887322-31887575)
chr3 (76-344)||(24382758-24383016)
chr3 (76-344)||(23888637-23888895)
chr3 (76-335)||(33113055-33113303)
chr3 (87-331)||(33852548-33852782)
chr3 (76-335)||(41020877-41021126)
chr3 (76-338)||(2977200-2977452)
chr3 (76-266)||(40508854-40509034)
chr3 (139-302)||(1845842-1846001)
chr3 (76-318)||(51454137-51454373)
chr3 (76-278)||(39641770-39641962)
chr3 (139-203)||(45898350-45898414)
chr3 (263-344)||(45898242-45898323)
chr3 (76-136)||(1847675-1847735)
chr3 (240-303)||(2226079-2226142)
chr3 (280-338)||(40508801-40508859)
chr3 (142-203)||(21348784-21348845)
chr3 (76-172)||(33111842-33111932)
chr3 (142-203)||(53190781-53190842)
chr3 (142-303)||(30599844-30600001)
chr3 (88-171)||(31885531-31885608)
chr3 (143-203)||(41977812-41977872)
chr3 (240-303)||(53190686-53190749)
chr3 (142-203)||(3152240-3152301)
chr3 (142-203)||(27899103-27899164)
chr3 (142-203)||(35905734-35905795)
chr3 (232-303)||(5125948-5126019)
chr3 (240-303)||(17515465-17515528)
chr3 (89-136)||(24381758-24381805)
chr3 (240-303)||(35905639-35905702)
chr3 (240-303)||(41977904-41977967)
chr3 (240-303)||(54898591-54898654)
chr3 (142-203)||(2226174-2226235)
chr3 (142-203)||(2660273-2660334)
chr3 (162-203)||(7884895-7884936)
chr3 (142-203)||(17515371-17515432)
chr3 (210-303)||(41623777-41623870)
chr3 (146-203)||(42279572-42279629)
chr3 (142-203)||(43765198-43765259)
chr3 (142-203)||(44794268-44794329)
chr3 (76-172)||(45897051-45897141)
chr3 (76-172)||(48635373-48635463)
chr3 (146-203)||(51684675-51684732)
chr3 (142-203)||(54898498-54898559)
chr3 (76-136)||(33850983-33851043)
chr3 (76-136)||(40508494-40508554)
chr3 (76-136)||(40998516-40998576)
chr3 (227-303)||(42279649-42279725)
[»] chr1 (32 HSPs)
chr1 (76-335)||(42134483-42134732)
chr1 (76-344)||(36895375-36895633)
chr1 (91-344)||(45380849-45381092)
chr1 (76-344)||(44157434-44157691)
chr1 (76-344)||(46638672-46638930)
chr1 (76-338)||(35479847-35480098)
chr1 (76-335)||(18183818-18184066)
chr1 (85-344)||(31801643-31801892)
chr1 (76-333)||(33685126-33685371)
chr1 (76-335)||(47269330-47269579)
chr1 (76-335)||(27940609-27940858)
chr1 (150-306)||(6575261-6575411)
chr1 (142-303)||(15104502-15104659)
chr1 (142-203)||(4855968-4856029)
chr1 (142-203)||(34778140-34778201)
chr1 (146-303)||(6818584-6818737)
chr1 (240-295)||(27087437-27087492)
chr1 (76-172)||(5784867-5784957)
chr1 (242-303)||(31238401-31238462)
chr1 (142-203)||(46583558-46583619)
chr1 (247-303)||(34778045-34778101)
chr1 (85-203)||(2869589-2869701)
chr1 (240-303)||(4855873-4855936)
chr1 (144-203)||(9121670-9121729)
chr1 (240-303)||(26225460-26225523)
chr1 (240-303)||(50556003-50556066)
chr1 (142-203)||(31238497-31238558)
chr1 (76-172)||(31803700-31803790)
chr1 (142-203)||(50556099-50556160)
chr1 (146-203)||(51121970-51122027)
chr1 (142-203)||(51896154-51896215)
chr1 (76-136)||(11152546-11152606)
[»] chr7 (37 HSPs)
chr7 (76-344)||(46996567-46996825)
chr7 (76-335)||(23953806-23954056)
chr7 (76-332)||(47341559-47341809)
chr7 (76-333)||(33038673-33038920)
chr7 (76-338)||(46812453-46812705)
chr7 (76-344)||(40784347-40784605)
chr7 (76-332)||(2167480-2167727)
chr7 (76-335)||(8423155-8423404)
chr7 (80-335)||(2492332-2492576)
chr7 (76-303)||(27955371-27955588)
chr7 (76-335)||(35344164-35344413)
chr7 (76-236)||(38614885-38615034)
chr7 (76-194)||(38613492-38613604)
chr7 (142-286)||(37796104-37796244)
chr7 (232-303)||(38613610-38613681)
chr7 (142-203)||(6602396-6602457)
chr7 (142-203)||(34776917-34776978)
chr7 (76-136)||(40785578-40785638)
chr7 (238-335)||(1546440-1546537)
chr7 (146-203)||(37115528-37115585)
chr7 (76-172)||(45465184-45465274)
chr7 (76-136)||(33775409-33775469)
chr7 (227-303)||(35693276-35693352)
chr7 (92-136)||(38614822-38614866)
chr7 (142-303)||(39859135-39859292)
chr7 (240-303)||(6602490-6602553)
chr7 (144-203)||(20478105-20478164)
chr7 (240-303)||(30940331-30940394)
chr7 (232-266)||(13034820-13034854)
chr7 (232-306)||(31913616-31913690)
chr7 (142-203)||(24228411-24228472)
chr7 (142-203)||(27666067-27666128)
chr7 (142-203)||(45359397-45359458)
chr7 (76-172)||(46994661-46994751)
chr7 (142-186)||(56391-56435)
chr7 (139-203)||(19712265-19712329)
chr7 (247-303)||(34691136-34691192)
[»] chr4 (25 HSPs)
chr4 (76-334)||(44558368-44558616)
chr4 (76-344)||(51041796-51042053)
chr4 (139-344)||(2827462-2827663)
chr4 (146-335)||(35996128-35996313)
chr4 (76-306)||(27624807-27625027)
chr4 (76-335)||(44794634-44794883)
chr4 (76-335)||(47941812-47942061)
chr4 (76-328)||(2350385-2350630)
chr4 (76-303)||(4519377-4519594)
chr4 (76-335)||(10762582-10762831)
chr4 (76-304)||(10372611-10372829)
chr4 (227-303)||(2693159-2693235)
chr4 (76-172)||(4520451-4520541)
chr4 (242-303)||(11255846-11255907)
chr4 (142-203)||(41761748-41761809)
chr4 (240-303)||(51012080-51012143)
chr4 (142-203)||(49523185-49523246)
chr4 (142-203)||(51011987-51012048)
chr4 (76-136)||(43778390-43778450)
chr4 (144-203)||(13450982-13451041)
chr4 (97-136)||(51040757-51040796)
chr4 (242-303)||(25993653-25993714)
chr4 (234-303)||(27382266-27382335)
chr4 (142-203)||(43519485-43519546)
chr4 (76-136)||(39085182-39085242)
[»] chr6 (14 HSPs)
chr6 (76-335)||(29077329-29077578)
chr6 (90-303)||(3018338-3018541)
chr6 (76-335)||(4641356-4641605)
chr6 (76-335)||(29112301-29112550)
chr6 (139-335)||(2968197-2968389)
chr6 (142-303)||(20523427-20523584)
chr6 (142-203)||(32439093-32439154)
chr6 (142-203)||(13613584-13613645)
chr6 (144-203)||(3456811-3456870)
chr6 (240-303)||(14338381-14338444)
chr6 (162-203)||(7049838-7049879)
chr6 (142-203)||(7372960-7373021)
chr6 (142-203)||(9398721-9398782)
chr6 (76-136)||(30639612-30639672)
[»] scaffold0477 (1 HSPs)
scaffold0477 (76-319)||(6524-6757)
[»] scaffold1454 (2 HSPs)
scaffold1454 (240-303)||(1417-1480)
scaffold1454 (145-203)||(1327-1385)
[»] scaffold0129 (1 HSPs)
scaffold0129 (232-306)||(4606-4680)
[»] scaffold0058 (2 HSPs)
scaffold0058 (142-203)||(3355-3416)
scaffold0058 (142-203)||(4527-4588)
[»] scaffold1041 (1 HSPs)
scaffold1041 (139-186)||(2156-2203)
[»] scaffold0564 (1 HSPs)
scaffold0564 (247-303)||(8422-8478)


Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 38178291 - 38177964
Alignment:
Q  1 tccattgaaaactcatgatattgtcacgtaaatgtactttgtaatacgctgattagcacatagtgttctttaattagtgaaccgtcaaattcgtccttga 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||| |    
T  38178291 tccattgaaaactcatgatattgtcacgcaaatgtactttgtaatacgctgattagcacatagtgttgtttaatgagtgaactatcaaattcgtccttaa 38178192  T
Q  101 attttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgt 200  Q
    ||||||||||||||||||||||||||| ||||||||      |||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||    
T  38178191 attttcacgggtcggtcaaattcatccctcaattat------gcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgt 38178098  T
Q  201 ccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaactt 300  Q
    ||||||    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||    
T  38178097 ccatgt----gctccgttagccatgctgatatgtcgtcctgcatgctgtgttgtcttgtacacgtagcaaaaaggaagtcacgtgttcaaggactaactt 38178002  T
Q  301 gattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38178001 gattgatttgaaaaaagttcaattttcacttttcagtt 38177964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 38205515 - 38205188
Alignment:
Q  1 tccattgaaaactcatgatattgtcacgtaaatgtactttgtaatacgctgattagcacatagtgttctttaattagtgaaccgtcaaattcgtccttga 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||| |    
T  38205515 tccattgaaaactcatgatattgtcacgcaaatgtactttgtaatacgctgattagcacatagtgttgtttaatgagtgaactatcaaattcgtccttaa 38205416  T
Q  101 attttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgt 200  Q
    ||||||||||||||||||||||||||| ||||||||      |||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||    
T  38205415 attttcacgggtcggtcaaattcatccctcaattat------gcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgt 38205322  T
Q  201 ccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaactt 300  Q
    ||||||    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||    
T  38205321 ccatgt----gctccgttagccatgctgatatgtcgtcctgcatgctgtgttgtcttgtacacgtagcaaaaaggaagtcacgtgttcaaggactaactt 38205226  T
Q  301 gattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38205225 gattgatttgaaaaaagttcaattttcacttttcagtt 38205188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 76 - 344
Target Start/End: Complemental strand, 18728725 - 18728467
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||| |||||||||||  ||||| ||| ||| ||| | ||||||      |||||||||||||||||| ||||||||||||||    
T  18728725 agtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattat------gcgaaatatcaacttagtccctgaatttgtcag 18728632  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||||| ||    |||| ||||||| | ||||||||||  | |||||||||||||||||||||||||||||||||| |    
T  18728631 acgtccatcaaaaaggtccctccgtccaagt----gctctgttagccttgctgatctgtcaccttgcatgctgtgttgtcttgtacacgtggcaagaagg 18728536  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    |||||||||||| | ||||||| |||||||| ||| |||| ||| | |||||||||||||||| |||||    
T  18728535 aagccacgtgttaagggactaatttgattgaattggaaaatgttgagttttcacttttcagtttatttt 18728467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 76 - 344
Target Start/End: Original strand, 32087515 - 32087773
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||| |||||||||||| |||| |||| ||| ||| | ||||||      |||||||||||||||||| ||| ||||| ||||    
T  32087515 agtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattat------gcgaaatatcaacttagtcccttaatttttcag 32087608  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||||| ||    |||| ||||||| | ||||||| ||| | |||||||||||||||||||||| ||||||||||| |    
T  32087609 acgtccatcaaaaaggtccctccgtccaagt----gctctgttagccttgctgatctatcgccttgcatgctgtgttgtcttgtacgcgtggcaagaagg 32087704  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    |||||||||||||| ||||||| |||||||| ||| |||| ||| | |||||||||||||||| |||||    
T  32087705 aagccacgtgttcagggactaatttgattgaattggaaaatgttgagttttcacttttcagtttatttt 32087773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 76 - 344
Target Start/End: Original strand, 33256401 - 33256659
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||| |||||||| ||  ||||| ||| ||||||| ||||||||      |||||||||||||||| |   ||||||||||||    
T  33256401 agtgaaccatcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattat------gcgaaatatcaacttaatctttgaatttgtcag 33256494  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||| ||||||||||||| ||     ||||||||||| | ||||||||||  | ||||||||||||||||||||||  |||||||||| |    
T  33256495 acgtccatcaaaaaagtccctccgtccaagtc----ctccgttagccttgctgatctgtcaccttgcatgctgtgttgtcttgtacgagtggcaagaagg 33256590  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    |||||||||||||| ||||||| |||||||| |||||||| ||| | |||||||||||||||| |||||    
T  33256591 aagccacgtgttcagggactaatttgattgaattgaaaaatgttgagttttcacttttcagtttatttt 33256659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 43318183 - 43317934
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||| | ||||||| |||| |||||| ||||||||      |||||||||||||||||| ||||||||||||||    
T  43318183 agtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattat------gcgaaatatcaacttagtccctgaatttgtcag 43318090  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||| ||||||||||||||||||    | |||||| ||||||||| | ||| ||||| || ||||| |||| ||||||||||| ||||||| || |    
T  43318089 acgtccataaaaaaggtccctccgtcc----aagtgctctgttagccatgccgatatgtcgcccagcatgttgtgctgtcttgtacatgtggcaaaaagg 43317994  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||||||||||| |||||  |  || ||||| |||| |||||||||||||    
T  43317993 aagccacgtgttcaaggactaatttgatgaaagtggaaaaatttcagttttcacttttca 43317934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 35292504 - 35292256
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||| | |||| || |||| |||||| ||||||||      |||||||||||||||||| ||||||||||||||    
T  35292504 agtgaaccatcaaattcgtccttgaatttttatgggt-ggccaaaatcatccttcaattat------gcgaaatatcaacttagtccctgaatttgtcag 35292412  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||| |||||||| ||||||||||  |    ||||||||||| || ||||||||||| ||  |||| |||| ||||||||||||||||||| || |    
T  35292411 acgtccataaaaaaggttcctccgtccaaat----gctccgttagctattctgatctgtcgcccaacatgttgtgctgtcttgtacacgtggcaaaaagg 35292316  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||| ||||||||||||||||| |||||  |  |||||||| | || |||||||||||||    
T  35292315 aagctacgtgttcaaggactaatttgatgaaagtgaaaaaattccagttttcacttttca 35292256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 319
Target Start/End: Original strand, 35395334 - 35395565
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||| ||| |||||||||||  ||||| ||| ||| ||| ||||||||      |||||||||||| ||||| ||||||||||| ||    
T  35395334 agtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattat------gcgaaatatcaatttagttcctgaatttgttag 35395427  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||||    | |||||| ||||||||| ||||| ||||| | ||||||  |||||||||||||| ||||||||||| |    
T  35395428 acgtccatcaaaaaggtccctccgtcc----aagtgctctgttagccatgctgatatgtcgccttgcatg--gtgttgtcttgtacgcgtggcaagaagg 35395521  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagtt 319  Q
    ||||||| |||||| ||||||| |||||||| ||| ||||||||    
T  35395522 aagccacatgttcagggactaatttgattgaattggaaaaagtt 35395565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 148 - 297
Target Start/End: Original strand, 38597012 - 38597157
Alignment:
Q  148 atatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgct 247  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || |    |||||||||| | ||||||||||| ||||||||||    
T  38597012 atatcaacttagtcccttaatttgtcagacgtccatcaaaaaggtccctctgtccaagtgt----tccgttagccgtgctgatctgtcgccctgcatgct 38597107  T
Q  248 gtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaa 297  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  38597108 gtgttgtcttgtacacgtggcaagaaggaagccgcgtgttcaaggactaa 38597157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 331
Target Start/End: Complemental strand, 32838500 - 32838378
Alignment:
Q  209 gtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattgatt 308  Q
    |||||||||||| |||  |||| ||||||||| |||||||||||||||||||||| | ||||||| ||||||||||||||||||| ||| |||| |||||    
T  32838500 gtgctccgttagtcatgttgatatgtcgtcctacatgctgtgttgtcttgtacacatagcaagaaggaagccacgtgttcaaggaataatttgaatgatt 32838401  T
Q  309 tgaaaaaagttcaattttcactt 331  Q
    || ||||||||||||||||||||    
T  32838400 tggaaaaagttcaattttcactt 32838378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 38596869 - 38596980
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||| | ||||||| ||||||| ||| ||||||||      |||||||||||||||||| ||||||||||| ||    
T  38596869 agtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattat------gcgaaatatcaacttagtccctgaatttgttag 38596962  T
Q  176 acgtccatcaaaaaggtc 193  Q
    ||||||||||||||||||    
T  38596963 acgtccatcaaaaaggtc 38596980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38156936 - 38157002
Alignment:
Q  1 tccattgaaaactcatgatattgtcacgtaaatgtactttgtaatacgctgattagcacatagtgtt 67  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  38156936 tccactgaaaactcatgatattgtcacgtaagtgtattttgtaatacgctgattagtacatagtgtt 38157002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 294
Target Start/End: Original strand, 24496801 - 24496952
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtc 238  Q
    ||||| |||||||||| ||| | ||||||||||| |||||| |||||||| ||||| ||||||||   |||| ||  ||||    | |||||||||||||    
T  24496801 ttatgtgaaatatcaaattaatccctgaatttgtgagacgttcatcaaaatggtccatccgtccaa--atgttct--gttactattgctgatctgtcgtc 24496896  T
Q  239 ctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggac 294  Q
    ||||||||| |||||||| ||||||||| ||| || |||| || |||| |||||||    
T  24496897 ctgcatgctatgttgtctcgtacacgtgtcaacaaggaagtcatgtgtacaaggac 24496952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 303
Target Start/End: Original strand, 17574379 - 17574535
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctg 241  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||||       ||||||||||   |  |||  ||||  | ||    
T  17574379 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaa----gctccgttagtggtgatgacgtgtcc-cttg 17574473  T
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  17574474 catgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 17574535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38221269 - 38221325
Alignment:
Q  1 tccattgaaaactcatg-atattgtcacgtaaatgtactttgtaatacgctgattag 56  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||| |||||||    
T  38221269 tccattgaaaactcatatatattgtcacgtaaatgtacttagtaatacgttgattag 38221325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 303
Target Start/End: Original strand, 7267998 - 7268060
Alignment:
Q  241 gcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||| |||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  7267998 gcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 7268060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 7267904 - 7267965
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| | ||||||||||||    
T  7267904 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatgatccctccgtcca 7267965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 30468343 - 30468282
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| | |||||||  |||||||||||||||| ||||||||||||||    
T  30468343 tgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgtcca 30468282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 34327696 - 34327757
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| |||| |||||||||    
T  34327696 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtctctccgtcca 34327757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 36057676 - 36057615
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||  |||||||||  |||||||||||||||| ||||||||||||||    
T  36057676 tgcgaaatatctatttagaccctgaattttacagacgtccatcaaaatggtccctccgtcca 36057615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 32835877 - 32835937
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| ||||||| |||||||||||||||||||||||||| ||| | ||||||    
T  32835877 agtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattat 32835937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38167978 - 38168022
Alignment:
Q  1 tccattgaaaactcatgatattgtcacgtaaatgtactttgtaat 45  Q
    |||||||||||||||||||||||||||||||   |||||||||||    
T  38167978 tccattgaaaactcatgatattgtcacgtaagcctactttgtaat 38168022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38199126 - 38199082
Alignment:
Q  1 tccattgaaaactcatgatattgtcacgtaaatgtactttgtaat 45  Q
    |||||||||||||||||||||||||||||||   |||||||||||    
T  38199126 tccattgaaaactcatgatattgtcacgtaagcctactttgtaat 38199082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 42619290 - 42619350
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| ||||||| |||||||||||||||||||||| ||| ||| ||||||||    
T  42619290 agtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattat 42619350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 29621842 - 29621783
Alignment:
Q  144 cgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  29621842 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcca 29621783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 24541275 - 24541230
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaa 187  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||    
T  24541275 tgcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 24541230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 40330605 - 40330515
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgt 172  Q
    |||||| | |||| ||||||| |||||||||||||||||| |||| || ||| ||||      |||||||||||||||| ||| | |||||||||||    
T  40330605 agtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaa------ttatgcgaaatatcaatttaatccctgaatttgt 40330515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 18624990 - 18624914
Alignment:
Q  227 tgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||| |||| || |||||| ||||||||||| |||||||| ||| || | | |||||||| |||||||||| |||||    
T  18624990 tgatgtgtcttcttgcatgttgtgttgtcttatacacgtgtcaacaaggcaaccacgtgtacaaggactaatttgat 18624914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 76 - 338
Target Start/End: Original strand, 37417274 - 37417526
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||| ||||||||||||||||||| ||||||| ||||||||||| ||||||||      |||||||||||||||||| ||||||||||||||    
T  37417274 agtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattat------gcgaaatatcaacttagtccctgaatttgtcag 37417367  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||||||||||||||||||| |||||| ||    |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||| |    
T  37417368 acgtccatcaaaaaggtcccttcgtccaagt----gctccgttagccatgctgatctgttgccctgcatgctgtgttgtcttgtacacgtggcaagaagg 37417463  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
    |||||||||||||||||||||| || ||||||||| ||||||| ||||||||| |||||||||    
T  37417464 aagccacgtgttcaaggactaatttaattgatttggaaaaagtccaattttcaattttcagtt 37417526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 76 - 344
Target Start/End: Original strand, 25619661 - 25619919
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||||||      || ||||||||||||||| |||||||||||||     
T  25619661 agtgaaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattat------gcaaaatatcaacttagtccctgaatttgtcat 25619754  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    | ||||||||||||||||||||| |||| ||    ||||||||||||||  ||||||||||  ||||||| || |||||||| ||||||||||||||| |    
T  25619755 atgtccatcaaaaaggtccctccatccaagt----gctccgttagccatgttgatctgtcgctctgcatgttgcgttgtcttatacacgtggcaagaaag 25619850  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    ||||||| |||||||||||||| |||||||| |||||||||||| | ||||||||||| |||| |||||    
T  25619851 aagccacatgttcaaggactaatttgattgaattgaaaaaagtttagttttcactttttagtttatttt 25619919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 139 - 344
Target Start/End: Complemental strand, 39463 - 39262
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtc 238  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| || |    |||||||||||| ||||| |||||||    
T  39463 ttatgcgaaatatcaacttagtccctgaatttgtcagacgttcatcaaaaaggtccccccgtccaagtgt----tccgttagccatgctgatatgtcgtc 39368  T
Q  239 ctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
     |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| || |||||||| ||| |||| ||| | ||||||||||||||||    
T  39367 ttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggacaaatttgattgaattggaaaatgttgagttttcacttttcagtt 39268  T
Q  339 aatttt 344  Q
     |||||    
T  39267 tatttt 39262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 76 - 344
Target Start/End: Original strand, 15432329 - 15432587
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||  |||||||||||| | ||||||||||||||||||| ||||||||      |||||||||||| |||||  |||||||||||||    
T  15432329 agtgaaccatcaaatttatccttgaatttttatgggtcggtcaaattcatccctcaattat------gcgaaatatcaatttagtctctgaatttgtcag 15432422  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||||||||||||||| | | |||||| ||    ||||  |||| ||| ||||  ||||| |||||||| ||||||||||||||||||||||||||| |    
T  15432423 acgtccatcaaaaaggttcattcgtccaagt----gctctattagtcatgctgacatgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaagg 15432518  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    ||| || ||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||| |||||    
T  15432519 aagtcatgtgttcaaggactaatttgattgaattggaaaaagttcagttttcacttttcagtttatttt 15432587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 139 - 344
Target Start/End: Complemental strand, 92413 - 92212
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtc 238  Q
    ||||||||||||||||||||||   |||||||||||||||| ||||||||||||||||| ||||| ||    |||||||||||||| ||||| |||||||    
T  92413 ttatgcgaaatatcaacttagtctttgaatttgtcagacgttcatcaaaaaggtccctcagtccaagt----gctccgttagccatgctgatatgtcgtc 92318  T
Q  239 ctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
     ||||||||||||||||||||||  |||||||||| ||||||||||||||| |||| || |||||||| ||| |||| ||| | ||||||||||||||||    
T  92317 ttgcatgctgtgttgtcttgtacgtgtggcaagaaggaagccacgtgttcagggacaaatttgattgaattggaaaatgttgagttttcacttttcagtt 92218  T
Q  339 aatttt 344  Q
     |||||    
T  92217 tatttt 92212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 29909783 - 29909534
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||| |||| |||||||||||| ||||| ||| ||  ||| ||||||||      |||||||||||| ||||| ||| ||||||||||    
T  29909783 agtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattat------gcgaaatatcaatttagtcccttaatttgtcag 29909690  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||||| ||    |||| |||||||||  ||||||||||   |||||| ||||||||||||||| ||||||||||| |    
T  29909689 acgtccatcaaaaaggtccctccgtccaagt----gctctgttagccatgttgatctgtcgcgttgcatgttgtgttgtcttgtacgcgtggcaagaagg 29909594  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||| | ||||||| |||||||| ||  |||||||| | |||||||||||||    
T  29909593 aagccacgtgttaagggactaatttgattgaatttgaaaaagttgagttttcacttttca 29909534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 79 - 289
Target Start/End: Original strand, 42879360 - 42879559
Alignment:
Q  79 gaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcagacg 178  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||||| | ||||||      |||||| |||||||||||   |||||||||||||||    
T  42879360 gaaccatcaaattcgtccttaaatttttacgggtcggtcaaattcatcccttaattat------gcgaaa-atcaacttagtctatgaatttgtcagacg 42879452  T
Q  179 tccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaag 278  Q
    ||||||||||||||||||||||||| || |    |||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  42879453 tccatcaaaaaggtccctccgtccaagtgt----tccgttagtcatgctgatatgtcgccctgcatgctgtgttgtcttgtacacgtgacaagaaggaag 42879548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 335
Target Start/End: Original strand, 41706540 - 41706789
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || || | |||||||||||||||||||||||||| ||| ||||||||      |||||||||||| ||| | ||||||||| ||      
T  41706540 agtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattat------gcgaaatatcaatttaatccctgaatttatcga 41706633  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| ||||  ||||| | ||||||||||| |||||||||| ||||||||||| |    
T  41706634 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaagg 41706729  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    ||| |||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  41706730 aagtcacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 41706789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 335
Target Start/End: Original strand, 15372500 - 15372749
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || |||| |||||||||||||||||| |||||||  || ||||||||      || ||||||||| ||| | ||||||||| ||||    
T  15372500 agtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattat------gcaaaatatcaatttaatccctgaatttatcag 15372593  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| || |  ||||| | |||||| |||| |||||||||| ||||||||||| |    
T  15372594 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctaacatgtcgccttgcatgttgtgctgtcttgtacgcgtggcaagaagg 15372689  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  15372690 aagccacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 15372749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 76 - 333
Target Start/End: Original strand, 42001611 - 42001856
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||| |||||| |  |||||| |||| || |||||      |||||||||||| ||| | | ||||||||||||    
T  42001611 agtgaaccatcaaattcgtccttgaatttttacgggttgtccaaatttatccctctattat------gcgaaatatcaatttaatccttgaatttgtcag 42001704  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    || | |||||||||||| | ||| |||    | ||||| ||||||||||  |||| ||||| |||||||| || ||||||||||||||||| |||||| |    
T  42001705 acat-catcaaaaaggttcatccatcc----aagtgcttcgttagccatgttgatgtgtcgccctgcatgttgagttgtcttgtacacgtgacaagaagg 42001799  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcactttt 333  Q
    ||| |||||||||||||||| | |||||||| ||| ||||| ||| ||||||||||||    
T  42001800 aagtcacgtgttcaaggactgatttgattgaattggaaaaaattc-attttcactttt 42001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 11315396 - 11315337
Alignment:
Q  144 cgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  11315396 cgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatggtccctccgtcca 11315337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 39560 - 39678
Alignment:
Q  79 gaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcagacg 178  Q
    ||||| |||| || |||| |||||||| ||||||||| ||||||| ||| ||||||||      |||||||||||| ||| | ||||||||| |||| ||    
T  39560 gaaccatcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattat------gcgaaatatcaatttaatccctgaatttatcaggcg 39653  T
Q  179 tccatcaaaaaggtccctccgtcca 203  Q
    || || |||||||||||||||||||    
T  39654 tcgattaaaaaggtccctccgtcca 39678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 14389086 - 14389010
Alignment:
Q  227 tgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||| |||| || |||||| |||||||||||||||||||| ||| || | |||||||||| ||||||||||||||||    
T  14389086 tgatgtgtcctcttgcatgttgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaacttgat 14389010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 303
Target Start/End: Complemental strand, 39664829 - 39664674
Alignment:
Q  144 cgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgca 243  Q
    ||||||||| | ||||| |||||||||  |||||||||||||||| |||||||||||||    |   ||||||||||   |  |||| |||| || |||     
T  39664829 cgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcc----aaaagctccgttagtggtgatgatgtgtcctcttgct 39664734  T
Q  244 tgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
     ||||||||||| |||||||||| ||| || | |||||||||| |||||||||| |||||    
T  39664733 agctgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaatttgat 39664674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 16763137 - 16763198
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  16763137 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 16763198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 303
Target Start/End: Complemental strand, 42519293 - 42519131
Alignment:
Q  137 atttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcg 236  Q
    |||| ||| ||||||| | ||||| |||||||||  |||||||||||||||| ||||||||| ||||       ||||||||||   |  |||| ||||     
T  42519293 atttttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaa----gctccgttagtggtgatgatgtgtcc 42519198  T
Q  237 tcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    || |||||||||||||||| |||||||||| ||| || | || ||||||| |||||||||| |||||    
T  42519197 tcttgcatgctgtgttgtcctgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgat 42519131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 6797662 - 6797725
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| |||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  6797662 tgcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 6797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 10716872 - 10716809
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| |||||||||||||||||||| ||| || |||||||||||| ||||||| || |||||    
T  10716872 tgcatgttgtgttgtcttgtacacgtgtcaacaaggaagccacgtgtacaaggaccaatttgat 10716809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 303
Target Start/End: Original strand, 40560284 - 40560441
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctg 241  Q
    ||||||||||| | ||||| |||||||||  ||||||||||||||||  |||||||||||||   | ||  || |||||   |  |||| |||| || ||    
T  40560284 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatagtccctccgtcca--aaagt--tctgttagtggtgatgatgtgtcctcttg 40560379  T
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||||||||||| ||||| |||| ||| || | |||||||||| |||||||||| |||||    
T  40560380 catgctgtgttgtcatgtacgcgtgtcaacaaggcagccacgtgtacaaggactaaattgat 40560441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 25620653 - 25620611
Alignment:
Q  90 ttcgtccttgaattttcacgggtcggtcaaattcatccatcaa 132  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  25620653 ttcgtctttgaattttcacgggtcggtcaaattcatccctcaa 25620611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 39723 - 39772
Alignment:
Q  284 tgttcaaggactaacttgattgatttgaaaaaagttcaattttcactttt 333  Q
    |||||||||||||| |||||||||||| |||||||| | |||||||||||    
T  39723 tgttcaaggactaatttgattgatttggaaaaagtttacttttcactttt 39772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 44709828 - 44709767
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||| | | ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  44709828 tgcgaaataactatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 44709767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 41232 - 41172
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| ||||||| |||||||||||||||||| ||||||| ||| ||||||||    
T  41232 agtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattat 41172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 303
Target Start/End: Complemental strand, 19908329 - 19908172
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctg 241  Q
    ||||||||||| | ||||| | |||||||  ||||||||| |||||| ||||||||||||||       ||||||||||   |  |||  |||| || ||    
T  19908329 tgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatggtccctccgtccaaaa----gctccgttagtggtgatgacgtgtcctcttg 19908234  T
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||||||||||| |||||||||| ||| ||   |||||||||| |||||||||| |||||    
T  19908233 catgctgtgttgtcatgtacacgtgtcaacaagacagccacgtgtacaaggactaatttgat 19908172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 24208128 - 24208064
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||| ||||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  24208128 ttattcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtcca 24208064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 16763230 - 16763293
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| ||| |||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  16763230 tgcatgttgttttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 16763293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 6786061 - 6786003
Alignment:
Q  145 gaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  6786061 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtcca 6786003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 37020572 - 37020630
Alignment:
Q  145 gaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  37020572 gaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcca 37020630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 2766995 - 2767056
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||| ||||||| |||||||| |||||    
T  2766995 tgcgaaatatctatttagtccctgaattttacagacgtctatcaaaatggtccctctgtcca 2767056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 11021534 - 11021624
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgt 172  Q
    |||||| | |||| ||||||| |||||||||||||||||| ||| ||| ||| ||||      |||||||||||||||| ||| | |||||||||||    
T  11021534 agtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaa------ttatgcgaaatatcaatttaatccctgaatttgt 11021624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 11315324 - 11315263
Alignment:
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||| |||||||||||||||||||| ||| || |||||||| ||| ||||||| || |||||    
T  11315324 catgttgtgttgtcttgtacacgtgtcaacaaggaagccacatgtacaaggaccaatttgat 11315263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 14389167 - 14389106
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  || | ||||||||||| ||||||||||||||    
T  14389167 tgcgaaatatctatttagtccctgaattttccaaatgtccatcaaaatggtccctccgtcca 14389106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 17946247 - 17946344
Alignment:
Q  238 cctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||| ||| ||||||||| ||||||| || ||| || |||| ||||||| |||||||||| ||||| ||   | ||||| |||| |||||||||||||    
T  17946247 cctgtatgttgtgttgtcatgtacacatgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacgcaaaaaattcagttttcacttttca 17946344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 33194 - 33254
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| ||||||| |||||||||||||||||| ||| ||| ||| ||||||||    
T  33194 agtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattat 33254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 37418859 - 37418799
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| ||||| |||||||||||||||||||| ||||||| ||| | ||||||    
T  37418859 agtgaatcatcaacttcgtacttgaattttcacgggtcggccaaattcgtcctttaattat 37418799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 42880901 - 42880841
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| ||||||| |||||||| ||||||||||||||||| ||| | ||||||    
T  42880901 agtgaatcatcaacttcgtccctgaatttttacgggtcggtcaaattcgtcccttaattat 42880841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 44709747 - 44709671
Alignment:
Q  227 tgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||| |||| || |||||| |||||||||||||||||||| ||| ||   | |||||||| |||||||||| |||||    
T  44709747 tgatatgtcctcttgcatgttgtgttgtcttgtacacgtgtcaacaagacatccacgtgtacaaggactaaattgat 44709671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 5e-78; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 42897897 - 42897648
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||| |||||||||||||| ||||||||| ||||||| ||| |||||||| |      |||||||||||||||| | ||||||||||||    
T  42897897 agtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgt------gaaatatcaacttagtccttgaatttgtcag 42897804  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||||| ||    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42897803 acgtccatcaaaaaggtccctccgtccaagt----gctctgttagccatgctgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaagg 42897708  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||||||||||| |||||| ||||| ||||||| ||||| ||||||||||    
T  42897707 aagccacgtgttcaaggactaatttgatttatttggaaaaagtccaattatcacttttca 42897648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 76 - 334
Target Start/End: Complemental strand, 37526146 - 37525898
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||| | ||||||||      |||||||||||||||||| ||||||||| ||||    
T  37526146 agtgaaccatcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattat------gcgaaatatcaacttagtccctgaatttttcag 37526053  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    || ||||||||||||||||||||||||| ||    || | ||||| |||  ||||||||||||||| ||| ||||||||||| ||||||||||||||| |    
T  37526052 acatccatcaaaaaggtccctccgtccaagt----gcgctgttagtcatgttgatctgtcgtcctgtatgttgtgttgtcttatacacgtggcaagaagg 37525957  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttc 334  Q
    |||||||||||||||||||||| |||||| | ||| |||||||  ||||||||||||||    
T  37525956 aagccacgtgttcaaggactaatttgattcaattggaaaaagtcaaattttcacttttc 37525898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 76 - 333
Target Start/End: Original strand, 1320618 - 1320865
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||| |||||| ||||||||||||||||  |||||||||| ||||||||      || ||||||||||||||| ||||||||||||||    
T  1320618 agtgaaccatcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattat------gcaaaatatcaacttagtccctgaatttgtcag 1320711  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||| || ||||||| |||||||| || |    ||||| ||||||  |||  ||||| |||||||||| ||||||||||||||||||||||||| |    
T  1320712 acgtccataaataaggtccttccgtccaagtgt----tccgtcagccatggtgacatgtcgccctgcatgctatgttgtcttgtacacgtggcaagaagg 1320807  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcactttt 333  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  1320808 aagccacgtgttcaaggactaatttgattgaattgaaaaaagttcagttttcactttt 1320865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 76 - 351
Target Start/End: Complemental strand, 38882920 - 38882655
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| |||      |||| ||||||| ||| | ||||||||||||||    
T  38882920 agtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactat------gcgagatatcaatttaatccctgaatttgtcag 38882827  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||| ||||| ||||||||||||| ||    ||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||| || |    
T  38882826 acgtccataaaaaatgtccctccgtccaagt----gctccgttagccatgttgatctgtcgtcctgcatgctgtgttgtcttgtactcgtggcaacaagg 38882731  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaattttatttttc 351  Q
    ||| ||||||||||||||| || || || ||  || ||||| | || |||||||||||||||| | ||| ||||||    
T  38882730 aagtcacgtgttcaaggaccaatttaatggaagtggaaaaattacagttttcacttttcagtttaatttttttttc 38882655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 76 - 349
Target Start/End: Original strand, 32822362 - 32822624
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| |||||||||||||||| | || |||| ||||||||||| ||||||||  |||    ||||||||||||||| ||||||||||||||    
T  32822362 agtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattat--tta----aaatatcaacttagtccctgaatttgtcag 32822455  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    | ||||||||||||||||| |||||||| ||    |||  |||||| || ||||||||||| | |||||||| ||||||||||||| ||||||||||| |    
T  32822456 atgtccatcaaaaaggtccttccgtccaagt----gctttgttagc-atgctgatctgtcgccatgcatgctttgttgtcttgtacgcgtggcaagaagg 32822550  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaattttatttt 349  Q
    |||||||||||||| ||||||| |||||||| ||  |||||||||||||||||||||| |||| ||||| ||||    
T  32822551 aagccacgtgttcagggactaatttgattgaatttgaaaaagttcaattttcactttttagtttattttttttt 32822624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 80 - 338
Target Start/End: Complemental strand, 33160267 - 33160019
Alignment:
Q  80 aaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcagacgt 179  Q
    |||| |||||||||||||||||||||||| |||||| ||||||||||| |||||||| |      ||||||||||||||||  ||||||||||||||||     
T  33160267 aaccatcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgt------gaaatatcaacttagtctctgaatttgtcagacgc 33160174  T
Q  180 ccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagc 279  Q
    |||||||||||||||||||  |    || |||||| ||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||| |||||    
T  33160173 ccatcaaaaaggtccctccacc----taagtgctctgttagccatgctgatctgtcgccctgcatgttgtgttgtcttatacacgtggcaagaa-gaagc 33160079  T
Q  280 -cacgtgttcaaggactaacttgattgatttgaaaaaagttcaa-ttttcacttttcagtt 338  Q
     |||||||||||||||||| |||||||| ||| ||||| ||||| ||||||||||||||||    
T  33160078 tcacgtgttcaaggactaatttgattgaattggaaaaa-ttcaagttttcacttttcagtt 33160019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 349
Target Start/End: Complemental strand, 33750450 - 33750244
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtc 238  Q
    |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||    |||| |||||| ||  ||||||||||||    
T  33750450 ttatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaagt----gctctgttagcgatgttgatctgtcgtc 33750355  T
Q  239 ctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
     |||||| ||||||||||||||| ||||||||||| ||||||| ||||||| |||| || |||||||| ||| |||| ||| | ||||||||||||||||    
T  33750354 ttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagccatgtgttcagggacgaatttgattgaattggaaaatgttgagttttcacttttcagtt 33750255  T
Q  339 aattttatttt 349  Q
     ||||| ||||    
T  33750254 tattttttttt 33750244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 76 - 344
Target Start/End: Complemental strand, 462493 - 462237
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||| ||||||||| || | |||| ||||||||||| ||||||||      |||||||||||||||||| | |||||||||||     
T  462493 agtgaaccatcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattat------gcgaaatatcaacttagtccttgaatttgtcaa 462400  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||||||||||||| ||||||| |||    | |||||| ||||||||| ||||| ||||| | |||||| |||||| |||| ||||||||||||||| |    
T  462399 acgtccatcaaaaagatccctccatcc----aagtgctctgttagccatgctgatttgtcgccgtgcatgttgtgttatcttatacacgtggcaagaagg 462304  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    ||||   ||||||||||||||| |||||||| ||  |||||||||| |||||||| ||||||| |||||    
T  462303 aagc--agtgttcaaggactaatttgattgaatttgaaaaagttcagttttcactcttcagtttatttt 462237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 139 - 344
Target Start/End: Original strand, 8654558 - 8654758
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtc 238  Q
    |||||||||||||||  ||| | | ||||||| ||||||||||||||||| |||||||||||||| ||    |||||||||||||| ||||  ||||| |    
T  8654558 ttatgcgaaatatcat-ttaattcttgaatttatcagacgtccatcaaaagggtccctccgtccaagt----gctccgttagccatgctgacatgtcgcc 8654652  T
Q  239 ctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
    ||||||||  ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||| |||||||||| ||||||||||||| ||    
T  8654653 ctgcatgcaatgttgtcttgtacacgtggcaagaaggaagccacatgttcaaggactaatttgattgaattggaaaaagttcacttttcacttttcaatt 8654752  T
Q  339 aatttt 344  Q
     |||||    
T  8654753 tatttt 8654758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 31201266 - 31201017
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || |||| |||||||||||||||||| ||||||| ||||||||||||      |||||||||||| ||| | ||||||||| ||||    
T  31201266 agtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattat------gcgaaatatcaatttaatccctgaatttatcag 31201173  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| ||||  ||||| | |||||| ||||||||||||||  ||||||||||| |    
T  31201172 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtcgccttgcatgatgtgttgtcttgtatgcgtggcaagaagg 31201077  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    ||| || ||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  31201076 aagtcatgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 31201017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 76 - 344
Target Start/End: Original strand, 31821419 - 31821667
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||  |||||||||||| |||||||||||  ||||||||| ||| ||| ||||||||      |||||||||||||||||| || |||||| ||||    
T  31821419 agtgaacaatcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattat------gcgaaatatcaacttagtcccagaatttatcag 31821512  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||||    | || ||| ||||||| | ||||||||||||| |||||| |||||||||||||         ||||| |    
T  31821513 acgtccatcaaaaaggtccctccgtcc----aagtcctctgttagccttgctgatctgtcgtcttgcatgatgtgttgtcttgt---------aagaagg 31821599  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    |||||||||||||| ||||||| |||||||| ||| ||||| || | ||||||| |||||||| |||||    
T  31821600 aagccacgtgttcagggactaatttgattgaattg-aaaaatttgagttttcacatttcagtttatttt 31821667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 316
Target Start/End: Original strand, 9184445 - 9184614
Alignment:
Q  143 gcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgc 242  Q
    |||||||||||| ||||| ||||||||||||||||||| ||| ||| |||||||||||||    |  |||| | ||||   | ||||||||||| |||||    
T  9184445 gcgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtcc----aaatgcttcattagtgctgctgatctgtcgccctgc 9184540  T
Q  243 atgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattgatttgaaaaaa 316  Q
    ||| |||||||||||||||| ||| ||| || ||| |||||||| ||| ||| || ||||| ||  ||||||||    
T  9184541 atgatgtgttgtcttgtacatgtgtcaacaaggaatccacgtgtacaaagaccaatttgatggaaatgaaaaaa 9184614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 13108419 - 13108358
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  13108419 tgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 13108358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 303
Target Start/End: Original strand, 38547289 - 38547445
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctg 241  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||| ||||||||| ||||       ||||||||||   |  |||  ||||  | ||    
T  38547289 tgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaa----gctccgttagtggtgatgacgtgtcc-cttg 38547383  T
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  38547384 catgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 38547445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 461186 - 461237
Alignment:
Q  85 tcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  461186 tcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattat 461237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 13108326 - 13108263
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||||||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  13108326 tgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 13108263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 25373712 - 25373608
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||| | |||| ||| ||||||||||||||||  |||| ||||||||| | ||||||||      |||||||||||||||| | ||||||||||||||    
T  25373712 agtgaatcatcaagttcatccttgaattttcacgcatcggccaaattcattcctcaattat------gcgaaatatcaacttaattcctgaatttgtcag 25373619  T
Q  176 acgtccatcaa 186  Q
    ||||| |||||    
T  25373618 acgtcaatcaa 25373608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 303
Target Start/End: Original strand, 5036509 - 5036667
Alignment:
Q  145 gaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcat 244  Q
    |||||||| | ||||| | |||||||  |||||||| ||||||| |||| |||||||||  |    |||| |||||  ||  |||| |||| || |||||    
T  5036509 gaaatatctatttagtccttgaattttacagacgtctatcaaaatggtctctccgtccaaattaaagctctgttagtgatgatgatgtgtcctcttgcat 5036608  T
Q  245 gctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    | |||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  5036609 gttgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 5036667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 8609870 - 8609809
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  8609870 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 8609809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 8609777 - 8609714
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||||||||||||||||||||||| | | || | |||||||||| |||||||||| |||||    
T  8609777 tgcatgctgtgttgtcttgtacacgtgtcgacaaggcagccacgtgtacaaggactaaattgat 8609714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 37524873 - 37524919
Alignment:
Q  90 ttcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||||||||||||| ||||||||||||||||||||| | ||||||    
T  37524873 ttcgtccttgaatttttacgggtcggtcaaattcatcccttaattat 37524919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 303
Target Start/End: Complemental strand, 9673245 - 9673091
Alignment:
Q  145 gaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcat 244  Q
    |||||||| | ||| | |||||||||  |||||||||||||||| ||||||||||||    ||   ||| ||||||   |  |||| |||| || |||||    
T  9673245 gaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtc----taaaagcttcgttagtggtgatgatgtgtcttcttgcat 9673150  T
Q  245 gctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    | ||||||||| |||||||||| ||| || | |||||||||| |||||||||| |||||    
T  9673149 gttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaatttgat 9673091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 13282539 - 13282600
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  || ||||||||||||| ||||||||||||||    
T  13282539 tgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctccgtcca 13282600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 13486182 - 13486121
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| |||||||| |||||    
T  13486182 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctctgtcca 13486121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 26242397 - 26242336
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | |||||  ||||||||  |||||||||||||||| ||||||||||||||    
T  26242397 tgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgtcca 26242336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 27691215 - 27691276
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  27691215 tgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtcca 27691276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 41825727 - 41825666
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| |||| |||||||||    
T  41825727 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcactccgtcca 41825666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 286
Target Start/End: Complemental strand, 11722792 - 11722732
Alignment:
Q  226 ctgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgt 286  Q
    ||||| ||||||| |||||| |||||||| ||||||||||| ||| || ||||||||||||    
T  11722792 ctgatatgtcgtcttgcatgttgtgttgtgttgtacacgtgtcaacaaggaagccacgtgt 11722732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 38881429 - 38881489
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||||||||||||||||||||||||  || | ||||||||||| ||||||||    
T  38881429 agtgaatcatcaaattcgtccttgaattttcacgaatcagccaaattcatccctcaattat 38881489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 25707334 - 25707287
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaa 186  Q
    |||||||||||||||||||| | ||||||||||| ||||||| |||||    
T  25707334 ttatgcgaaatatcaacttaatccctgaatttgtgagacgtcaatcaa 25707287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 15305861 - 15305919
Alignment:
Q  145 gaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  15305861 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtcca 15305919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 15486230 - 15486288
Alignment:
Q  145 gaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  15486230 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtcca 15486288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 41042664 - 41042606
Alignment:
Q  145 gaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||| | ||||| |||||||||  ||| |||||||||||| ||||||||||||||    
T  41042664 gaaatatctatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtcca 41042606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 33748333 - 33748423
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgt 172  Q
    |||||| | |||| ||||||| |||||||||||||||||| ||| ||| ||| ||||      |||||||||||||||| ||| | |||||||||||    
T  33748333 agtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaa------ttatgcgaaatatcaatttaattcctgaatttgt 33748423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 28433699 - 28433643
Alignment:
Q  247 tgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||| ||||||||||||| || || |||||||||||| || ||||||| |||||    
T  28433699 tgtgttggcttgtacacgtgggaaaaaggaagccacgtgtacatggactaaattgat 28433643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 41825646 - 41825570
Alignment:
Q  227 tgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||| |||| || |||||||||||||||| ||||||| || ||| || | || ||||||| |||||||||| |||||    
T  41825646 tgatgtgtcttcttgcatgctgtgttgtcctgtacacatgtcaacaaggcagtcacgtgtacaaggactaatttgat 41825570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 3e-76; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 76 - 338
Target Start/End: Original strand, 48633878 - 48634136
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||      |||||||||||||||||| ||||||||||||||    
T  48633878 agtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattat------gcgaaatatcaacttagtccctgaatttgtcag 48633971  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtg----ttgtcttgtacacgtggcaag 271  Q
    |||||||||||||||||||||||||||    | ||||||||||||||||  |||||||||| |||||||| ||||    ||||||||||||||||||||     
T  48633972 acgtccatcaaaaaggtccctccgtcc----aagtgctccgttagccatgttgatctgtcgccctgcatgatgtgttgtttgtcttgtacacgtggcaaa 48634067  T
Q  272 aacgaagccacgtgttcaaggactaacttgattgatttg--aaaaaagttcaattttcacttttcagtt 338  Q
    || ||||||||||||||||||||||| |||||||| |||  ||||||||  ||||||||||||||||||    
T  48634068 aaggaagccacgtgttcaaggactaatttgattgaattgaaaaaaaagtctaattttcacttttcagtt 48634136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 76 - 338
Target Start/End: Original strand, 23774153 - 23774404
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||||||| ||||| ||||||| ||| ||||||||      |||||||||||| ||||| ||||||||||||||    
T  23774153 agtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattat------gcgaaatatcaatttagtccctgaatttgtcag 23774246  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||| ||||||| |||    || |||||| |||||||||  |||||||||| |||||||| |||||||||||||||||||||||| || |    
T  23774247 acgtccatcaaaaaagtccctc-gtc----taagtgctctgttagccatgttgatctgtcgccctgcatgatgtgttgtcttgtacacgtggcaataagg 23774341  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
    |||||||||||||||||||||| | |||||||||| ||||||| |||||||||||||||||||    
T  23774342 aagccacgtgttcaaggactaattcgattgatttggaaaaagtccaattttcacttttcagtt 23774404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 76 - 332
Target Start/End: Complemental strand, 18430394 - 18430148
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||| ||||||| | ||||||||||| ||||||||      |||||||||||||||||| ||||||| ||||||    
T  18430394 agtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattat------gcgaaatatcaacttagtccctgaatatgtcag 18430301  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||  ||||||||||||||||||| ||    ||||||||||||||  |||  ||||| ||||||||| |||||||||||||||||||||||||| |    
T  18430300 acgtccaataaaaaggtccctccgtccaagt----gctccgttagccatggtgacatgtcgccctgcatgccgtgttgtcttgtacacgtggcaagaagg 18430205  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttt 332  Q
    || ||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||    
T  18430204 aaaccacgtgttcaaggactaatttgattgaattggaaaaagtccaattttcacttt 18430148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 76 - 344
Target Start/End: Complemental strand, 45257343 - 45257085
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||| |       ||||||||||||||| ||||||||||||||    
T  45257343 agtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgta------aaatatcaacttagttcctgaatttgtcag 45257250  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||| ||||| ||||||||||||| ||    |||||||||| ||| ||||  || || |||||||| ||||||||||||||||||||||||||| |    
T  45257249 acgtccataaaaaatgtccctccgtccaagt----gctccgttagtcatgctgacatgccgccctgcatgttgtgttgtcttgtacacgtggcaagaatg 45257154  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    |||||||||||||||||||||| |||||||| ||| ||||||| || ||||||||||||| || |||||    
T  45257153 aagccacgtgttcaaggactaatttgattgaattggaaaaagtccagttttcacttttcactttatttt 45257085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 76 - 338
Target Start/End: Complemental strand, 31887575 - 31887322
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||      |||||||||||||||||| ||||||||||||||    
T  31887575 agtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattat------gcgaaatatcaacttagtccctgaatttgtcag 31887482  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    | ||| |||||||||||||||||||||| ||    |||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||||| || |    
T  31887481 atgtctatcaaaaaggtccctccgtccaagt----gctccgttagccatgctgatttgtcgccttgcatgctgtgttgtcttgtacacgtggcaaaaagg 31887386  T
Q  276 aagccacgtgttcaaggactaacttgattgat-ttgaaaaaagttcaattttcacttttcagtt 338  Q
    ||||||  |||||||||||||| ||||| |||  || ||||| | || ||||||||||||||||    
T  31887385 aagccatatgttcaaggactaatttgatggatagtggaaaaattccagttttcacttttcagtt 31887322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 76 - 344
Target Start/End: Complemental strand, 24383016 - 24382758
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||      | |||||||||||||||| | || |||||||||    
T  24383016 agtgaaccatcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattat------gagaaatatcaacttagtccatggatttgtcag 24382923  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||||| ||      |||||||||||| ||||| ||||| |||||||| ||||||||||| || ||| ||||| || |    
T  24382922 acgtccatcaaaaaggtccctccgtccaagtca----tccgttagccatgctgatatgtcgccctgcatgttgtgttgtcttatatacggggcaaaaagg 24382827  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||| |||||    
T  24382826 aagccacgtgttcaaggactaatttgattgaattggaaaaagttcagttttcacttttcagtttatttt 24382758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 76 - 344
Target Start/End: Complemental strand, 23888895 - 23888637
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||| |||||||||||  ||||| ||| ||| ||| ||||||||      ||||||||||| |||||| |||||||||||||     
T  23888895 agtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattat------gcgaaatatcagcttagtccctgaatttgtcaa 23888802  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||||||||||||||||||||||||||  |     ||||||||||| | ||||||||||| | ||||| |||||||||||||||| ||||||||||| |    
T  23888801 acgtccatcaaaaaggtccctccgtccaaatc----ctccgttagccttgctgatctgtcgccttgcatactgtgttgtcttgtacgcgtggcaagaagg 23888706  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    ||||||| |||||| ||||||| |||||||| ||| |||| ||| | |||||||||||||||| |||||    
T  23888705 aagccacatgttcagggactaatttgattgaattggaaaatgttgagttttcacttttcagtttatttt 23888637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 33113303 - 33113055
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||| ||||||||||||| ||||||||| |||| |||||| ||||||||      |||||||||||||||||| ||| ||||||||||    
T  33113303 agtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattat------gcgaaatatcaacttagtccctaaatttgtcag 33113210  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||| |     ||| |||||||||||| | ||||||||| || ||||| || | ||||||||||||||||||| || |    
T  33113209 acgtccatcaaaaaggtccctccgtcaa-----gtgatccgttagccatgccgatctgtcgcccagcatgttgcgctgtcttgtacacgtggcaaaaagg 33113115  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||||||||||| ||||| ||  || ||||| | || |||||||||||||    
T  33113114 aagccacgtgttcaaggactaatttgatggaagtggaaaaattccacttttcacttttca 33113055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 87 - 331
Target Start/End: Complemental strand, 33852782 - 33852548
Alignment:
Q  87 aaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaa 186  Q
    ||||| ||||||||||||| |||||| ||||||||| |||| ||||||||      |||||||||||| ||| |  |||||||| |||||||||||||||    
T  33852782 aaatttgtccttgaatttttacgggttggtcaaatttatccctcaattat------gcgaaatatcaatttaatttctgaatttatcagacgtccatcaa 33852689  T
Q  187 aaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgt 286  Q
    ||||||||||| ||||| ||    ||||||||||||||  |||  ||||| |||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  33852688 aaaggtccctctgtccaagt----gctccgttagccatggtgacatgtcgccctgcatgttgtgttgtcttgtagacgtggcaagaaggaagccacgtgt 33852593  T
Q  287 tcaaggactaacttgattgatttgaaaaaagttcaattttcactt 331  Q
    ||||||||||| |||||||| ||| ||||| | ||||||||||||    
T  33852592 tcaaggactaatttgattgaattggaaaaaatccaattttcactt 33852548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 41021126 - 41020877
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||| |||||||||||| ||||| ||||||  ||| ||||||||      ||||||| |||| ||  | ||||||||||||||    
T  41021126 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattat------gcgaaatttcaatttcatccctgaatttgtcag 41021033  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| ||||  ||||| |  |||||||||| |||| ||||| ||||||||||| |    
T  41021032 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaagg 41020937  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  41020936 aagccacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 41020877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 76 - 338
Target Start/End: Complemental strand, 2977452 - 2977200
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||| | ||||||||||||||||||||| |||  |||| ||||||||||| | ||||||      |||||||||||| | ||| ||| |||||||||     
T  2977452 agtgaatcatcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattat------gcgaaatatcaattcagtccctaaatttgtcat 2977359  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||||||||||||||||| |||| ||    | ||||||||||||| || ||||| ||||| |||||||||| ||||||||  ||||||||||||||| |    
T  2977358 acgtccatcaaaaaggtccatccgccc----aagtgctccgttagcgatgctgatttgtcgccctgcatgctatgttgtctaatacacgtggcaagaagg 2977263  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
    || |||| |||||||||||||| ||||| ||  |||||||| | ||||||| |||||||||||    
T  2977262 aaaccacatgttcaaggactaatttgatggaagtgaaaaaattccaattttgacttttcagtt 2977200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 266
Target Start/End: Complemental strand, 40509034 - 40508854
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| ||| ||||||||      |||||||||||||||| | | ||||||||||||    
T  40509034 agtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattat------gcgaaatatcaacttaatccttgaatttgtcag 40508941  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtg 266  Q
    |||||||||||||| ||||||||||||| || |    |||||||| | | ||||||||||| |||||||| ||||||||| ||||||||||    
T  40508940 acgtccatcaaaaatgtccctccgtccaagtgt----tccgttagtcgtgctgatctgtcgccctgcatgttgtgttgtcatgtacacgtg 40508854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 139 - 302
Target Start/End: Original strand, 1845842 - 1846001
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtc 238  Q
    |||||| |||||||||||||||   |||||||| ||||||||||||||||| ||||||||||||| ||    ||||||||| ||||  |||| ||||| |    
T  1845842 ttatgcaaaatatcaacttagtctttgaatttgacagacgtccatcaaaaacgtccctccgtccaagt----gctccgttaaccatgttgatatgtcgcc 1845937  T
Q  239 ctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttga 302  Q
    ||||||| |||| |||| | |||||||||||| || ||||||||||||||||||||||| ||||    
T  1845938 ctgcatgatgtgatgtcctatacacgtggcaaaaaggaagccacgtgttcaaggactaatttga 1846001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 76 - 318
Target Start/End: Complemental strand, 51454373 - 51454137
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||||| | ||||||||      |||||||||||| |||||   |||||||||||     
T  51454373 agtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattat------gcgaaatatcaaattagtctttgaatttgtcaa 51454280  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatct----gtcgtcctgcatgctgtgttgtcttgtacacgtggcaag 271  Q
    || ||||| ||||| ||||||| ||||| ||    | ||||||||||||  | || |    |||  |||||||| ||||||||||| |||||||||||||    
T  51454279 acatccataaaaaatgtccctctgtccaagt----gatccgttagccatgttcatatatatgtccccctgcatgatgtgttgtcttatacacgtggcaag 51454184  T
Q  272 aacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagt 318  Q
    || || |||||||||||||||||||| | |||| | |||||||||||    
T  51454183 aaggaggccacgtgttcaaggactaattagattaaattgaaaaaagt 51454137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 76 - 278
Target Start/End: Complemental strand, 39641962 - 39641770
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||| ||||||||||||| ||||||||| ||||||||||  ||||||||       | || |||||||||||| | | ||||||||||    
T  39641962 agtgaaccatcaaatttgtccttgaatttttacgggtcggccaaattcatctctcaattatt------caaagtatcaacttagtccttaaatttgtcag 39641869  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||| ||| |||||||||||||||| || |||    |||||||||||||  ||||||  ||||||||||| ||||||||||| |||| |||| ||||| |    
T  39641868 acgttcataaaaaaggtccctccgttcaagta----ctccgttagccatgttgatctaccgtcctgcatgttgtgttgtcttatacatgtggtaagaagg 39641773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 45898414 - 45898350
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||    
T  45898414 ttatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaaggtccctccgtcca 45898350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 45898323 - 45898242
Alignment:
Q  263 cgtggcaagaacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    ||||||||||| ||||||||||||| | ||||||| |||||||| ||| |||| ||| | |||||||||||||||| |||||    
T  45898323 cgtggcaagaaggaagccacgtgtttagggactaatttgattgaattggaaaatgttgagttttcacttttcagtttatttt 45898242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 1847735 - 1847675
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||    
T  1847735 agtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattat 1847675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 2226142 - 2226079
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||||||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  2226142 tgcatgctgtgttgtcttgtacacgtgtcaacaaggtagccacgtgtacaaggactaaattgat 2226079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 40508859 - 40508801
Alignment:
Q  280 cacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
    |||||||||||||||||| ||  |||||||| ||||||| |||||||||||||||||||    
T  40508859 cacgtgttcaaggactaatttttttgatttggaaaaagtccaattttcacttttcagtt 40508801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 21348784 - 21348845
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  21348784 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 21348845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 33111842 - 33111932
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgt 172  Q
    |||||| | |||| ||||||| ||||||||||||| |||||||||||||||| ||||      |||||||||||||||| ||| | |||||||||||    
T  33111842 agtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaa------ttatgcgaaatatcaatttaatccctgaatttgt 33111932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 53190842 - 53190781
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  53190842 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 53190781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 303
Target Start/End: Complemental strand, 30600001 - 30599844
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctg 241  Q
    ||||||||||| | ||||| |||||||||   ||||||| ||||||| |||||||||||||    |   |||| |||||   |  |||| |||| || ||    
T  30600001 tgcgaaatatctatttagtccctgaattttagagacgtcgatcaaaatggtccctccgtcc----aaaagctctgttagtggtgatgatgtgtcctcttg 30599906  T
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||||||||||||||||||| || ||| || | |||||||||| |||||||||| |||||    
T  30599905 catgctgtgttgtcttgtacacatgtcaataaggcagccacgtgtacaaggactaaattgat 30599844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 31885531 - 31885608
Alignment:
Q  88 aattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttg 171  Q
    |||||||||||| ||||| ||||||||||||||||||||| |      || |||||||||||||||| ||||||| ||||||||    
T  31885531 aattcgtccttggatttttacgggtcggtcaaattcatccct------taattatgcgaaatatcaatttagtacttgaatttg 31885608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 41977812 - 41977872
Alignment:
Q  143 gcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||||||| ||||| |||||||||  ||||||||| |||||| ||||||||||||||    
T  41977812 gcgaaatatcaaattagtccctgaattttacagacgtccgtcaaaatggtccctccgtcca 41977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 53190749 - 53190686
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| |||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  53190749 tgcatgttgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 53190686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 3152301 - 3152240
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  3152301 tgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtcca 3152240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 27899164 - 27899103
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  ||||||||||| |||| ||||||||||||||    
T  27899164 tgcgaaatatctatttagtccctgaattttacagacgtccataaaaatggtccctccgtcca 27899103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 35905795 - 35905734
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  ||||||| |||||||| ||||||||||||||    
T  35905795 tgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgtcca 35905734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 5125948 - 5126019
Alignment:
Q  232 tgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||||||||||   |||||||||||||||||| | | || |||||||||||| ||||||| || |||||    
T  5125948 tgtcgtcctgcatgtcctgttgtcttgtacacgtgtctacaaagaagccacgtgtacaaggaccaatttgat 5126019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 17515465 - 17515528
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| ||||||||||||||||| || ||| || | |||||||||| |||||||||| |||||    
T  17515465 tgcatgttgtgttgtcttgtacacttgtcaataaggcagccacgtgtacaaggactaaattgat 17515528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 24381758 - 24381805
Alignment:
Q  89 attcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    ||||||||||||||||| |||| |||| ||||||||||| ||||||||    
T  24381758 attcgtccttgaatttttacggatcggccaaattcatccctcaattat 24381805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 35905702 - 35905639
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| || ||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  35905702 tgcatgatgggttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 35905639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 41977904 - 41977967
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| |||||||||||||||||||| ||| || | || ||||||| |||||||||| |||||    
T  41977904 tgcatgttgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgat 41977967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 54898591 - 54898654
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| || ||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  54898591 tgcatgttgcgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 54898654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 2226235 - 2226174
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  ||||||| |||||||| | ||||||||||||    
T  2226235 tgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatgttccctccgtcca 2226174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 2660273 - 2660334
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| | |||||||  |||||||||||||||   |||||||||||||    
T  2660273 tgcgaaatatcaaattagtccttgaattttacagacgtccatcaaattcgtccctccgtcca 2660334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 7884936 - 7884895
Alignment:
Q  162 cctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||||  |||||||||||||||| ||||||||||||||    
T  7884936 cctgaattttacagacgtccatcaaaatggtccctccgtcca 7884895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 17515371 - 17515432
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  || ||||||||||||| |||||||| |||||    
T  17515371 tgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtcca 17515432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 303
Target Start/End: Original strand, 41623777 - 41623870
Alignment:
Q  210 tgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||||||||   |||||| ||||||| |||||||   |||||||||||| ||||| | | || |||||||||||| ||||||| || |||||    
T  41623777 tgctccgttagtgctactgagctgtcgttctgcatgtcttgttgtcttgtatacgtgtctacaaggaagccacgtgtacaaggaccaatttgat 41623870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 42279572 - 42279629
Alignment:
Q  146 aaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||| | ||||| |||||||||  |||||||| ||||||| ||||||||||||||    
T  42279572 aaatatctatttagtccctgaattttacagacgtctatcaaaatggtccctccgtcca 42279629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 43765198 - 43765259
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | |||||  ||||||||  |||||||||||||||| ||||||||| ||||    
T  43765198 tgcgaaatatctatttagtttctgaattttacagacgtccatcaaaatggtccctccatcca 43765259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 44794268 - 44794329
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  |||| ||||||||||   |||||||||||||    
T  44794268 tgcgaaatatcaaattagtccctgaattttgcagaagtccatcaaattcgtccctccgtcca 44794329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 45897051 - 45897141
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgt 172  Q
    |||||| | |||| |||||||||||||||| ||||||||| ||| ||| ||| ||||      |||||||||||||||| ||| | |||||||||||    
T  45897051 agtgaatcatcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaa------ttatgcgaaatatcaatttaatccctgaatttgt 45897141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 48635463 - 48635373
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgt 172  Q
    |||||| | |||| ||||||| ||||||||||||| |||||||||||| ||| |      || |||||||||||||||| ||| | |||||||||||    
T  48635463 agtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtccct------taattatgcgaaatatcaatttaatccctgaatttgt 48635373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 51684675 - 51684732
Alignment:
Q  146 aaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||| | ||||| | |||||||  |||||||||||||||| ||||||||||||||    
T  51684675 aaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgtcca 51684732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 54898498 - 54898559
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  ||||||| |||||||| |||| |||||||||    
T  54898498 tgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtctctccgtcca 54898559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 33850983 - 33851043
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| ||||| | |||||||||||||||||||||| ||| ||| ||||||||    
T  33850983 agtgaatcatcaatttcgttcctgaattttcacgggtcggtcaacttcgtccctcaattat 33851043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 40508494 - 40508554
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| ||||||| |||||||||||||||||| ||||||| ||| | ||||||    
T  40508494 agtgaatcatcaacttcgtccctgaattttcacgggtcggacaaattcgtcccttaattat 40508554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 40998516 - 40998576
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||||| |||| || |||| |||||||||||| ||||||||||||  ||| ||||||||    
T  40998516 agtgaaccatcaagttagtccctgaattttcacgcgtcggtcaaattagtccctcaattat 40998576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 42279649 - 42279725
Alignment:
Q  227 tgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||| |||| || |||||| ||||||||||| |||||||| ||| || | || ||||||| |||||||||| |||||    
T  42279649 tgatgtgtcctcttgcatgttgtgttgtcttatacacgtgtcaacaaggcagacacgtgtacaaggactaatttgat 42279725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 3e-73; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 76 - 335
Target Start/End: Original strand, 42134483 - 42134732
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||| |||||| ||||||||      |||||||||||||||||| ||||||||||||||    
T  42134483 agtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattat------gcgaaatatcaacttagtccctgaatttgtcag 42134576  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||||| ||    ||||||||||||||  |||  ||||  |||||||||||||||||||||||||||||||||||| |    
T  42134577 acgtccatcaaaaaggtccctccgtccaagt----gctccgttagccatgttgacatgtcaccctgcatgctgtgttgtcttgtacacgtggcaagaagg 42134672  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    ||||||| |||||||||||||| |||||||| ||| ||||||| || |||||||||||||    
T  42134673 aagccacatgttcaaggactaatttgattgaattggaaaaagtccagttttcacttttca 42134732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 76 - 344
Target Start/End: Complemental strand, 36895633 - 36895375
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||| |||| |||||||||||| ||||||||| ||| ||||||||||||      |||||||||||||||||| ||||||||||||||    
T  36895633 agtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattat------gcgaaatatcaacttagtccctgaatttgtcag 36895540  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||||||||||||||||||| |||||| ||    |||||||||||||| ||||||||||||| |||||| ||||||||||||||| ||||||||||| |    
T  36895539 acgtccatcaaaaaggtcccttcgtccaagt----gctccgttagccatgctgatctgtcgtcttgcatgttgtgttgtcttgtacgcgtggcaagaagg 36895444  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    |||||||||||||| |||| || |||||||| ||| |||| ||| | ||||||||||||| || |||||    
T  36895443 aagccacgtgttcagggacgaatttgattgaattggaaaatgttgagttttcacttttcaatttatttt 36895375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 91 - 344
Target Start/End: Complemental strand, 45381092 - 45380849
Alignment:
Q  91 tcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaag 190  Q
    |||||||| |||||| |||||  |||||||||||||| ||||||||      |||||||||||||||||| | |||||||||||||||||||||||||||    
T  45381092 tcgtccttaaatttttacgggaaggtcaaattcatccctcaattat------gcgaaatatcaacttagttcatgaatttgtcagacgtccatcaaaaag 45380999  T
Q  191 gtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaa 290  Q
    || |||||||||| ||    ||||||||||||||  |||  ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45380998 gttcctccgtccaagt----gctccgttagccatggtgacatgtcgccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaa 45380903  T
Q  291 ggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    ||||||| |||||||| ||| ||||||| |||||||||||||||| || |||||    
T  45380902 ggactaatttgattgaattggaaaaagtccaattttcacttttcactttatttt 45380849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 76 - 344
Target Start/End: Original strand, 44157434 - 44157691
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||| |||||||| |||||||||||||||| ||||||||||| ||||||||      || ||||||||||||||| ||||||||||| ||    
T  44157434 agtgaaccatcaaactcgtccttaaattttcacgggtcggccaaattcatccctcaattat------gcaaaatatcaacttagtccctgaatttgttag 44157527  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||| ||||| |||| ||||||    || ||||||||| ||||||| |||  ||||| |||||||| ||||||||||||||||||||||||||| |    
T  44157528 acgtccataaaaaaagtccttccgtc----taagtgctccgtcagccatagtgacatgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaagg 44157623  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    ||||||||||||||| |||||| |||||||| ||| |||||||||| ||||||||||||| || |||||    
T  44157624 aagccacgtgttcaa-gactaatttgattgaattggaaaaagttcagttttcacttttcactttatttt 44157691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 76 - 344
Target Start/End: Complemental strand, 46638930 - 46638672
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||| | |||||||||||| ||||| ||| ||||||| ||||||||      |||||||||||||||||| | ||||||||||||    
T  46638930 agtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattat------gcgaaatatcaacttagtccttgaatttgtcag 46638837  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||||| |||||||||||||||||||| ||    |||||||||||||| ||||||||||| | |||||| ||||||||||||||| |||||||| || |    
T  46638836 acgtccaccaaaaaggtccctccgtccaagt----gctccgttagccatgctgatctgtcgccttgcatgttgtgttgtcttgtacgcgtggcaaaaagg 46638741  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    |||||||||||||| |||| || |||||||| ||| |||| ||| | |||||||||||||||| |||||    
T  46638740 aagccacgtgttcagggacgaatttgattgaattggaaaatgttgagttttcacttttcagtttatttt 46638672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 76 - 338
Target Start/End: Complemental strand, 35480098 - 35479847
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| ||||||||||||||||||||| || | ||||||||||| ||||||||      |||||||||||||||| |   ||||||||||||    
T  35480098 agtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattat------gcgaaatatcaacttaatctatgaatttgtcag 35480005  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||||||||||||||||| |||||||| ||    |||| |||||| || ||||||||||| | |||||||| ||||||||||||| ||||||||||| |    
T  35480004 acgtccatcaaaaaggtccttccgtccaagt----gctctgttagc-atgctgatctgtcgccatgcatgctttgttgtcttgtacgcgtggcaagaaag 35479910  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
    |||||||||||||| ||||||| |||||||| ||  |||||||||||||||||||||||||||    
T  35479909 aagccacgtgttcagggactaatttgattgaatttgaaaaagttcaattttcacttttcagtt 35479847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 18184066 - 18183818
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||| ||||||||| |||| |||| |||| |||||| ||||||||      |||||||||||||||||| ||||||||||||||    
T  18184066 agtgaaccatcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattat------gcgaaatatcaacttagtccctgaatttgtcag 18183973  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||| |||||| | || |     |||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||| || |    
T  18183972 acgtccatcaaaaatgtcccttcatcaa-----gtgctccgttagccatgctgatttgtcgtccagcatgttgtgttgtcttgtacacgtggcaaaaaag 18183878  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||||||||||| ||||| ||  || ||||| | || |||||||||||||    
T  18183877 aagccacgtgttcaaggactaatttgatggaagtggaaaaattccagttttcacttttca 18183818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 85 - 344
Target Start/End: Original strand, 31801643 - 31801892
Alignment:
Q  85 tcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatc 184  Q
    |||||||||||| | |||||||||  ||||||||| ||| ||| ||||||||      |||||||||||||||||| | | ||||||| |||||||||||    
T  31801643 tcaaattcgtccctaaattttcacacgtcggtcaacttcgtccctcaattat------gcgaaatatcaacttagtccttaaatttgtgagacgtccatc 31801736  T
Q  185 aaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgt 284  Q
    ||||||||||||||||||| ||    |||||||||||||| ||||| ||||||| |||||| ||||||||||||||| ||||||||||| |||| |||||    
T  31801737 aaaaaggtccctccgtccaagt----gctccgttagccatgctgatttgtcgtcttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagtcacgt 31801832  T
Q  285 gttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    ||||| |||| || |||||||| ||| |||| ||| | |||||||||||||||| |||||    
T  31801833 gttcagggacgaatttgattgaattggaaaatgttgagttttcacttttcagtttatttt 31801892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 76 - 333
Target Start/End: Complemental strand, 33685371 - 33685126
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||||      |||||||||||| ||| |   |||||||||||     
T  33685371 agtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattat------gcgaaatatcaatttaatcattgaatttgtcac 33685278  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |  |||||||||| | ||||||| |||| ||    |||||||||||||| | ||| ||||| |||||||| || |||||||||||||||||||||||| |    
T  33685277 atctccatcaaaa-gatccctccatccaagt----gctccgttagccatgccgatgtgtcgccctgcatgttgagttgtcttgtacacgtggcaagaagg 33685183  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcactttt 333  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||  |||||||||||    
T  33685182 aagccacgtgttcaaggactaatttgattgaattggaaaaagttc-gttttcactttt 33685126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 47269579 - 47269330
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||| |||||||||||| ||||| ||||||  ||| |||||||||      |||||| |||| ||  | |||||||||||||     
T  47269579 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattata------cgaaatttcaatttcatccctgaatttgtcaa 47269486  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| ||||  |||||||  ||||| |||| |||| ||||| ||||||||||| |    
T  47269485 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtcgtctggcatggtgtgctgtcctgtacgcgtggcaagaagg 47269390  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  47269389 aagccacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 47269330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 76 - 335
Target Start/End: Original strand, 27940609 - 27940858
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || |||| ||||||||||| ||| |||||||||| ||| ||||||||      |||||||||||| ||| | | ||||||| ||||    
T  27940609 agtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattat------gcgaaatatcaatttaatccttgaatttatcag 27940702  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| ||||  |||   | |||||| |||| |||||||||| ||||||||||| |    
T  27940703 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtaaccttgcatgatgtgctgtcttgtacgcgtggcaagaagg 27940798  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  27940799 aagccacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 27940858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 150 - 306
Target Start/End: Original strand, 6575261 - 6575411
Alignment:
Q  150 atcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgt 249  Q
    ||||||||||| |||||||||||||||| || ||||||||||||| |||||| | ||    |||| ||  ||||| ||||| ||||||| |||||||| |    
T  6575261 atcaacttagtccctgaatttgtcagacatctatcaaaaaggtccttccgtcaaagt----gctctgt--gccatgctgatatgtcgtcatgcatgcttt 6575354  T
Q  250 gttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattga 306  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||    
T  6575355 gttgtcttgtacgcgtggcaagaaggaagccacgtgttcaaggactaatttgattga 6575411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 303
Target Start/End: Original strand, 15104502 - 15104659
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctg 241  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||| ||||||||       ||||| ||||   |  |||| |||| || ||    
T  15104502 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaa----gctccattagtggtgatgatgtgtcttcttg 15104597  T
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  15104598 catgctgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaatttgat 15104659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 4856029 - 4855968
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  4856029 tgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 4855968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 34778201 - 34778140
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  |||| ||||||||||| ||||||||||||||    
T  34778201 tgcgaaatatcaaattagtccctgaattttacagatgtccatcaaaatggtccctccgtcca 34778140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 303
Target Start/End: Complemental strand, 6818737 - 6818584
Alignment:
Q  146 aaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatg 245  Q
    ||||||| | ||||| |||||||||  |||||||||||||||| |||||||||||||    |   ||||||||||   |  |||  |||| || ||||||    
T  6818737 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcc----aaaagctccgttagtggtgatgacatgtcctcttgcatg 6818642  T
Q  246 ctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
     ||||||||| |||||||||| ||| || | |||||||||| |||||||||| |||||    
T  6818641 ttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaatttgat 6818584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 27087437 - 27087492
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggact 295  Q
    ||||||||||||||||||||||||||| ||| || | |||||||||| ||||||||    
T  27087437 tgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggact 27087492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 5784957 - 5784867
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgt 172  Q
    |||||| | |||| ||||||| |||||||||||||||||||||| ||| ||| ||||      |||||||||||||||| ||| | |||||||||||    
T  5784957 agtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaa------ttatgcgaaatatcaatttaatccctgaatttgt 5784867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 31238462 - 31238401
Alignment:
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||||||||||| |||||||||| ||| || | |||||||||| |||||||||| |||||    
T  31238462 catgctgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaatttgat 31238401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 46583619 - 46583558
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  46583619 tgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatttgtccctccgtcca 46583558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 34778101 - 34778045
Alignment:
Q  247 tgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  34778101 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 34778045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 203
Target Start/End: Original strand, 2869589 - 2869701
Alignment:
Q  85 tcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatc 184  Q
    |||||||||||||||||||||||    |||||||||||| ||| | |||| |      |||||||||| | |||||  || |||||  ||||||||||||    
T  2869589 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaatttt------gcgaaatatctatttagtctctaaattttacagacgtccatc 2869682  T
Q  185 aaaaaggtccctccgtcca 203  Q
    |||| ||||||||||||||    
T  2869683 aaaatggtccctccgtcca 2869701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 4855936 - 4855873
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| |||||||||||||||||||| ||| || | || ||||||| |||||||||| |||||    
T  4855936 tgcatgttgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgat 4855873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 9121729 - 9121670
Alignment:
Q  144 cgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  9121729 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcca 9121670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 26225523 - 26225460
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| |||||||||||||||||||| ||| || | |||||| ||| |||||||||| |||||    
T  26225523 tgcatgatgtgttgtcttgtacacgtgtcaacaaagcagccacatgtacaaggactaaattgat 26225460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 50556066 - 50556003
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||||||||||||| |||||||||| ||| || | || ||||||| |||||||||| |||||    
T  50556066 tgcatgctgtgttgtcatgtacacgtgtcaacaagggagtcacgtgtacaaggactaatttgat 50556003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 31238558 - 31238497
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||| || |||||    
T  31238558 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccatctgtcca 31238497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 31803790 - 31803700
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgt 172  Q
    |||||| | |||| ||||||| |||||||||||||||||| ||| ||| ||| ||||      |||||||||||||||| ||| | |||||||||||    
T  31803790 agtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaa------ttatgcgaaatatcaatttaatccctgaatttgt 31803700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 50556160 - 50556099
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| ||| |||||  |||||||| ||||||| ||||||||||||||    
T  50556160 tgcgaaatatctatttagtccctaaattttacagacgtctatcaaaatggtccctccgtcca 50556099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 51121970 - 51122027
Alignment:
Q  146 aaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||| || || ||||||||| ||  ||||||||||||| ||||||||||||||    
T  51121970 aaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtcca 51122027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 51896215 - 51896154
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||| |||||||||||  |||||||||||||    
T  51896215 tgcgaaatatctatttagtccctgaattttacagatgtccatcaaaatagtccctccgtcca 51896154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 11152546 - 11152606
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| ||||||| |||||||||||||||||| ||| ||| ||| ||||||||    
T  11152546 agtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattat 11152606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 4e-69; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 76 - 344
Target Start/End: Complemental strand, 46996825 - 46996567
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||| |||||||||||| ||||| ||| ||| ||| ||||||||      ||||||||||||||||||  |||||||||||||    
T  46996825 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattat------gcgaaatatcaacttagtcactgaatttgtcag 46996732  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||||| ||    ||||||||||| || ||||||||||| | |||||||||||||||||||||| ||||||||||| |    
T  46996731 acgtccatcaaaaaggtccctccgtccaagt----gctccgttagcgatgctgatctgtcgccttgcatgctgtgttgtcttgtacgcgtggcaagaagg 46996636  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    ||||||||||||||||||| || |||||||| ||| |||| ||| | |||||||||||||||| |||||    
T  46996635 aagccacgtgttcaaggacgaatttgattgaattggaaaatgttgagttttcacttttcagtttatttt 46996567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 76 - 335
Target Start/End: Original strand, 23953806 - 23954056
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||||| |||||| |||||||||| |||||| ||||||||||||      |||||||||||||||||| | ||||||||||||    
T  23953806 agtgaaccatcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattat------gcgaaatatcaacttagtccgtgaatttgtcag 23953899  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||| |||||||||||||||||||||| ||    |||||||||||||| ||||| ||||| | |||||| |||||||||||||||||||||||| || |    
T  23953900 acgtcaatcaaaaaggtccctccgtccaagt----gctccgttagccatgctgatatgtcgccatgcatgttgtgttgtcttgtacacgtggcaaaaagg 23953995  T
Q  276 aagccacgtgttcaaggactaacttgattgat-ttgaaaaaagttcaattttcacttttca 335  Q
    ||||||||||||| |||||||| ||||| |||  || ||||| | ||||||||||||||||    
T  23953996 aagccacgtgttccaggactaatttgatggatagtggaaaaattccaattttcacttttca 23954056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 76 - 332
Target Start/End: Complemental strand, 47341809 - 47341559
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||      |||||||||||||||||| ||||||||||||||    
T  47341809 agtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattat------gcgaaatatcaacttagtccctgaatttgtcag 47341716  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcc----tgcatgctgtgttgtcttgtacacgtggcaag 271  Q
    ||||  |||||||||||  ||||||||    | ||||||||||||||||   ||  ||||| ||    ||||||||||||||||||||||||||||||||    
T  47341715 acgttaatcaaaaaggtatctccgtcc----aagtgctccgttagccatggggacatgtcgccctgcatgcatgctgtgttgtcttgtacacgtggcaag 47341620  T
Q  272 aacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttt 332  Q
    || ||||||||||||||||||||||| |||||||| ||| ||||||| || ||||||||||    
T  47341619 aaggaagccacgtgttcaaggactaatttgattgaattggaaaaagtccagttttcacttt 47341559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 76 - 333
Target Start/End: Complemental strand, 33038920 - 33038673
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||| | ||||||||||||||||||||| | ||||||||||||||||||| ||||||||      |||||||||||||||||| ||||||||| ||||    
T  33038920 agtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattat------gcgaaatatcaacttagtccctgaatttttcag 33038827  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||||| ||    |||| ||||| |||  ||||||||||||||||||| ||||||||||| |||||||| |||||| |    
T  33038826 acgtccatcaaaaaggtccctccgtccaagt----gctctgttaggcatgttgatctgtcgtcctgcatgttgtgttgtcttatacacgtgtcaagaagg 33038731  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcactttt 333  Q
    |||||| ||||||||||||| | |||||||| ||| |||| ||  | |||||||||||    
T  33038730 aagccatgtgttcaaggactgatttgattgaattggaaaatgtctagttttcactttt 33038673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 76 - 338
Target Start/End: Complemental strand, 46812705 - 46812453
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| |||||||||||||||| ||| ||||| ||||||||||| |||||||  |      |||||||||| ||||| ||| ||||||||||    
T  46812705 agtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgt------gaaatatcaatttagtccctaaatttgtcag 46812612  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||||||||||||||||  |||||||| ||    |||| ||||||||| ||||| ||||| ||||||||||||||||||||||||  |||||||||| |    
T  46812611 acgtccatcaaaaaggtcattccgtccaagt----gctctgttagccatgctgatatgtcgccctgcatgctgtgttgtcttgtacgtgtggcaagaagg 46812516  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
    |||||||||||||||||||||  |||||||| ||  |||| ||||||||||||||||||||||    
T  46812515 aagccacgtgttcaaggactactttgattgaatttgaaaaggttcaattttcacttttcagtt 46812453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 76 - 344
Target Start/End: Original strand, 40784347 - 40784605
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||| |||||||||| ||| ||| |  |||||||||| ||||||||      ||||||||||||||||||   ||||||||||||    
T  40784347 agtgaaccatcaaattcgttcttgaatttttacgcgtcagctaaattcatccttcaattat------gcgaaatatcaacttagtctttgaatttgtcag 40784440  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    || |||||||||||||||||||||||||   ||| |||  ||||  ||| |||||||||||||||||||| ||||||||||| ||||||||||||||| |    
T  40784441 acatccatcaaaaaggtccctccgtccaa--atgcgct--gttaatcatgctgatctgtcgtcctgcatgttgtgttgtcttatacacgtggcaagaagg 40784536  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    ||||||| |||||||||||||| |||||||| ||| |||| ||  |||||||||||||||||| |||||    
T  40784537 aagccacatgttcaaggactaatttgattgaattggaaaaggtcaaattttcacttttcagtttatttt 40784605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 76 - 332
Target Start/End: Original strand, 2167480 - 2167727
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| ||||||  |||||||||||   ||||||||||||||||||||| ||||||||      |||||||||||||||||| ||||||||||||||    
T  2167480 agtgaaccatcaaatatgtccttgaattagtacgggtcggtcaaattcatccctcaattat------gcgaaatatcaacttagtccctgaatttgtcag 2167573  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||| |||||||||||||||||||||||    | ||||||| |||||||| ||||  ||||  |||||||| |||||||||||||||||||||||| ||      
T  2167574 acgcccatcaaaaaggtccctccgtcc----aagtgctccattagccatgctgacgtgtcaccctgcatgatgtgttgtcttgtacacgtggcaaaaaga 2167669  T
Q  276 aagccacgtgttcaaggactaacttgattgat-ttgaaaaaagttcaattttcacttt 332  Q
    |||||||| ||||||||||||| ||||| |||  || ||||| |||| ||||||||||    
T  2167670 aagccacgcgttcaaggactaatttgatggatactggaaaaatttcagttttcacttt 2167727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 8423404 - 8423155
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || |||| |||||||||||||||| | ||||||  ||| ||||||||      |||||||||||| ||| | ||||||||| ||||    
T  8423404 agtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattat------gcgaaatatcaatttaatccctgaatttatcag 8423311  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||| |||||||||||||||||||  | |     |||||||||||||| ||||  ||||| | ||||||||||| |||||||||| ||||||||||| |    
T  8423310 acgtcaatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaagg 8423215  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  8423214 aagccacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 8423155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 80 - 335
Target Start/End: Original strand, 2492332 - 2492576
Alignment:
Q  80 aaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcagacgt 179  Q
    |||| ||||||||||||| ||||||| |||||||||||||| | |||| ||||||||      |||||||||||||||| ||| ||||||| ||| ||||    
T  2492332 aaccatcaaattcgtcctcgaatttttacgggtcggtcaaaattatccttcaattat------gcgaaatatcaacttaatacttgaatttttcaaacgt 2492425  T
Q  180 ccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagc 279  Q
    |||| |||||| ||| ||||| || ||    ||||||||||||||  |||||| ||| ||  |||||| || ||||||||||||||||||| || ||||     
T  2492426 ccataaaaaagttcc-tccgttcaagt----gctccgttagccatgttgatctatcgcccaacatgctctgctgtcttgtacacgtggcaaaaaggaagt 2492520  T
Q  280 cacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||||||| ||||| ||  |||||||| ||||||||||||||||||    
T  2492521 cacgtgttcaaggactaatttgatggaagtgaaaaaatttcaattttcacttttca 2492576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 303
Target Start/End: Original strand, 27955371 - 27955588
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||| | ||||||||||||||||||||| |||| || |  |||||||||| |||||| ||      ||||||||||||||| |  |||||||||||||    
T  27955371 agtgaatcatcaaattcgtccttgaatttttacggatcagctaaattcatccctcaatttta------cgaaatatcaacttaatttctgaatttgtcag 27955464  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||| ||||||||||||||| ||    |||||||||| ||| ||||| |||||| ||||||| ||||||||||||||||| |||||| || |    
T  27955465 acgtccatcaaagaggtccctccgtccaagt----gctccgttagtcatgctgatgtgtcgtgctgcatgttgtgttgtcttgtacacttggcaacaagg 27955560  T
Q  276 aagccacgtgttcaaggactaacttgat 303  Q
    |||||| |||||||||||| || |||||    
T  27955561 aagccatgtgttcaaggaccaatttgat 27955588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 35344413 - 35344164
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || ||||  ||||||||||||||| | ||||||| ||| ||||||||      |||||||||||| ||| | ||||||||| | ||    
T  35344413 agtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccctcaattat------gcgaaatatcaatttaatccctgaatttataag 35344320  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| ||||  ||| | | ||||||||||| |||||||||| ||||||||||| |    
T  35344319 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgttgccttgcatgctgtgctgtcttgtacgcgtggcaagaagg 35344224  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  35344223 aagccacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 35344164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 38615034 - 38614885
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||| | |||||||||||||| ||||||||||||||| |||||||||||| ||||||||      ||||||||| |||||||| ||||||||||||||    
T  38615034 agtgaaacatcaaattcgtccttaaattttcacgggtcgatcaaattcatccctcaattat------gcgaaatattaacttagtccctgaatttgtcag 38614941  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcg 236  Q
    |||||||| ||||| |||||||||||    || |||||| ||||||||| |||||||||||    
T  38614940 acgtccat-aaaaatgtccctccgtc----taagtgctctgttagccatgctgatctgtcg 38614885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 38613604 - 38613492
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||||| ||||      |||||||||||||||||||||| ||||||||||||||    
T  38613604 agtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaa------ttatgcgaaatatcaacttagtccctgaatttgtcag 38613511  T
Q  176 acgtccatcaaaaaggtcc 194  Q
    |||||||| ||||| ||||    
T  38613510 acgtccataaaaaatgtcc 38613492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 286
Target Start/End: Complemental strand, 37796244 - 37796104
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctg 241  Q
    ||||||||||| | ||||| |||||||||  | ||||||||||||||  ||||||||||||||      ||||||||||| || ||||| |||| || ||    
T  37796244 tgcgaaatatctatttagtccctgaattttacggacgtccatcaaaatagtccctccgtccataa----gctccgttagcgatgctgatgtgtcctcttg 37796149  T
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgt 286  Q
    |||| ||||||||||| |||||||| |||||| | ||||||||||    
T  37796148 catgttgtgttgtcttctacacgtgtcaagaaggcagccacgtgt 37796104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 38613610 - 38613681
Alignment:
Q  232 tgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||| |||||||| ||||||||||||||||||||| || ||  ||||||||||||||||||||||||||||    
T  38613610 tgtcgccctgcatggtgtgttgtcttgtacacgtgggaaaaagaaagccacgtgttcaaggactaacttgat 38613681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 6602396 - 6602457
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  6602396 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 6602457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 34776978 - 34776917
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  34776978 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 34776917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 40785638 - 40785578
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| |||||||||||||||||||||||||| ||||||||||  ||||||||    
T  40785638 agtgaatcatcaatttcgtccttgaattttcacgggtcggccaaattcatctctcaattat 40785578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 1546440 - 1546537
Alignment:
Q  238 cctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||| ||||||||||| || ||||| ||| || |||| ||||||| |||||||||| ||||| ||   | ||||| |||| |||||||||||||    
T  1546440 cctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacgcaaaaaattcagttttcacttttca 1546537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 37115585 - 37115528
Alignment:
Q  146 aaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||| | |||||||||||||||  ||||||||||||||||  |||||||||||||    
T  37115585 aaatatctatttagtacctgaattttacagacgtccatcaaaatagtccctccgtcca 37115528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 45465274 - 45465184
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgt 172  Q
    |||||| | |||| |||||||||||||||| ||||||||||||| ||| ||| ||||      |||||||||||||||| ||| | |||||||||||    
T  45465274 agtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaa------ttatgcgaaatatcaatttaatccctgaatttgt 45465184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 33775409 - 33775469
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| |||||| ||||||| |||||||| ||||||||||||| ||| ||| ||||||||    
T  33775409 agtgaatcgtcaacttcgtccctgaatttttacgggtcggtcaacttcgtccttcaattat 33775469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 35693352 - 35693276
Alignment:
Q  227 tgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||| |||| || ||||||  ||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  35693352 tgatgtgtcctcttgcatgtagtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 35693276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 38614866 - 38614822
Alignment:
Q  92 cgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||    
T  38614866 cgtccttgaatttttatgggtcggtcaaattcatccctcaattat 38614822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 303
Target Start/End: Complemental strand, 39859292 - 39859135
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctg 241  Q
    ||||||||||| | ||||| | |||||||  ||||||||| |||||| ||||||||||||||       ||||||||||   |  |||  |||| || ||    
T  39859292 tgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatggtccctccgtccaaaa----gctccgttagtggtgatgacgtgtcctcttg 39859197  T
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||||||||||| |||||||||| ||| ||   |||||||||| |||||||||| |||||    
T  39859196 catgctgtgttgtcatgtacacgtgtcaacaagacagccacgtgtacaaggactaatttgat 39859135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 6602490 - 6602553
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||||||||||||| |||||||||| |||  | | |||||||||| |||||||||| |||||    
T  6602490 tgcatgctgtgttgtcatgtacacgtgtcaaccaggcagccacgtgtacaaggactaatttgat 6602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 20478105 - 20478164
Alignment:
Q  144 cgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  20478105 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcca 20478164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 30940394 - 30940331
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||||||||||||| ||||||| || ||| || | |||||||||| |||||||||| |||||    
T  30940394 tgcatgctgtgttgtcctgtacacatgtcaacaaggcagccacgtgtacaaggactaaattgat 30940331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 13034820 - 13034854
Alignment:
Q  232 tgtcgtcctgcatgctgtgttgtcttgtacacgtg 266  Q
    |||||||||||||||||||||||| ||||||||||    
T  13034820 tgtcgtcctgcatgctgtgttgtcctgtacacgtg 13034854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 31913616 - 31913690
Alignment:
Q  232 tgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattga 306  Q
    ||||||||||||||   |||||||||| ||||||| | | || |||||||||||| ||||||| || ||||||||    
T  31913616 tgtcgtcctgcatggcttgttgtcttgcacacgtgtctacaaggaagccacgtgtacaaggaccaatttgattga 31913690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 24228472 - 24228411
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | |||||  ||||||||  |||||||||||||||| ||||||| ||||||    
T  24228472 tgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtcccttcgtcca 24228411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 27666128 - 27666067
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  || ||||||||||||   |||||||||||||    
T  27666128 tgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgtcca 27666067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 45359397 - 45359458
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| | |||||||  |||||||||||||||| ||||||||| ||||    
T  45359397 tgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccatcca 45359458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 46994661 - 46994751
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgt 172  Q
    |||||| | |||| ||||||| |||||||||||||||||| ||| ||| ||| ||||      |||||||||||||||| ||| | |||||||||||    
T  46994661 agtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaa------ttatgcgaaatatcaatttaatccctgaatttgt 46994751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 56391 - 56435
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaa 186  Q
    ||||||||||||| ||||| |||||||||  ||||||||||||||    
T  56391 tgcgaaatatcaaattagtccctgaattttacagacgtccatcaa 56435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 19712329 - 19712265
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||| |||||||||  |||||  |||||||| | ||||||||||||||| |||||| |||||||    
T  19712329 ttatgtgaaatatcacattagtctctgaatttattagacgtccatcaaaatggtcccaccgtcca 19712265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 34691136 - 34691192
Alignment:
Q  247 tgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||| |||||||||||||||| || |||||||||||| || ||| ||| |||||    
T  34691136 tgtgttggcttgtacacgtggcaacaaggaagccacgtgtacagggattaaattgat 34691192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 7e-68; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 76 - 334
Target Start/End: Complemental strand, 44558616 - 44558368
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||||||      |||||||||||||||||| ||||||||||||||    
T  44558616 agtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattat------gcgaaatatcaacttagtccctgaatttgtcag 44558523  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||||||||||||||||| |||||||| ||    |||  ||||||||| ||||||||||  | |||||||| ||||||||||||| ||||||||||| |    
T  44558522 acgtccatcaaaaaggtccttccgtccaagt----gctatgttagccatgctgatctgtcaccatgcatgctctgttgtcttgtacgcgtggcaagaagg 44558427  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttc 334  Q
    |||||||||||||||||||| | |||||||| ||  |||||||||| ||||||||||||    
T  44558426 aagccacgtgttcaaggactcatttgattgaatttgaaaaagttcagttttcacttttc 44558368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 76 - 344
Target Start/End: Complemental strand, 51042053 - 51041796
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||||||| |||||||| |      |||||||||||||||| | ||||||||||||    
T  51042053 agtgaaccgtcaaattcgtccttaaatttttacaggtcggtcaaattcatccctcaattatgt------gaaatatcaacttagtccatgaatttgtcag 51041960  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||| ||||||||||||||||| |||| ||    |||  ||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||| |    
T  51041959 acgtc-atcaaaaaggtccctccatccaagt----gctttgttagccatgctgatctgtcgccctgcatgttgtgttgtcttatacacgtggcaagaagg 51041865  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagttaatttt 344  Q
    ||||||| |||||||||||||| |||||||| ||| |||||||  |  ||||||||||||||| |||||    
T  51041864 aagccacatgttcaaggactaatttgattgaattggaaaaagtctagctttcacttttcagtttatttt 51041796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 139 - 344
Target Start/End: Original strand, 2827462 - 2827663
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtc 238  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||     ||||||||||| | |||||||||||||    
T  2827462 ttatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtc----ctccgttagccttgctgatctgtcgtc 2827557  T
Q  239 ctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttcagtt 338  Q
     |||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||| |||||||| ||| | ||||||||||||||||    
T  2827558 ttgcatgatgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggactaatttgattgaattgaaaaatgttgagttttcacttttcagtt 2827657  T
Q  339 aatttt 344  Q
     |||||    
T  2827658 tatttt 2827663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 146 - 335
Target Start/End: Original strand, 35996128 - 35996313
Alignment:
Q  146 aaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatg 245  Q
    ||||||||| ||| | ||||||||| |||||||||||||||||||||||||||||||| ||    |||||||||||||| ||||  ||||| | ||||||    
T  35996128 aaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtccaagt----gctccgttagccatgctgacatgtcgccatgcatg 35996223  T
Q  246 ctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||| ||| |||||||||||||    
T  35996224 ttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgaattggaaaaagatcacttttcacttttca 35996313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 76 - 306
Target Start/End: Original strand, 27624807 - 27625027
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    ||||||| ||||| |||| ||||||||||| |||||| |||||||||||||  ||||||||      |||||||||||||||||| ||||||||||||||    
T  27624807 agtgaacggtcaacttcgcccttgaatttttacgggttggtcaaattcatctttcaattat------gcgaaatatcaacttagtccctgaatttgtcag 27624900  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    ||||||||||||||||||  |||||| | ||    |||| |||||||||  |||||||||| | |||||||| |||||||||||||  |||||||||| |    
T  27624901 acgtccatcaaaaaggtcattccgtcaaagt----gctctgttagccatgttgatctgtcgccatgcatgctttgttgtcttgtacgtgtggcaagaagg 27624996  T
Q  276 aagccacgtgttcaaggactaacttgattga 306  Q
    |||||||||||||||||||||| ||||||||    
T  27624997 aagccacgtgttcaaggactaatttgattga 27625027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 76 - 335
Target Start/End: Complemental strand, 44794883 - 44794634
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || |||| |||||||||||  ||||||||||||| ||| ||||||||      |||||||||||| ||| | ||||||||| ||||    
T  44794883 agtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattat------gcgaaatatcaatttaatccctgaatttatcag 44794790  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| ||||  ||||| | ||||||||||| |||||||||| ||||||||||| |    
T  44794789 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtcgccttgcatgctgtgatgtcttgtacgcgtggcaagaagg 44794694  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  44794693 aagccacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 44794634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 76 - 335
Target Start/End: Original strand, 47941812 - 47942061
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || |||| |||||||| ||||||||||||||||| ||  ||||||||      |||||||||||| ||| | ||||||||| ||||    
T  47941812 agtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattat------gcgaaatatcaatttaatccctgaatttatcag 47941905  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| ||||  ||||| | |||||| |||| |||||||||| ||||||||||| |    
T  47941906 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtcgccttgcatgttgtgctgtcttgtacgcgtggcaagaagg 47942001  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    ||||||||||||||||||| || |||||||||||| |||||||||| |||||| ||||||    
T  47942002 aagccacgtgttcaaggacgaatttgattgatttggaaaaagttcacttttcatttttca 47942061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 76 - 328
Target Start/End: Complemental strand, 2350630 - 2350385
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || |||| |||||||||| ||||||| ||||||  ||| ||||||||      |||||||||||| ||| |  |||||||| ||||    
T  2350630 agtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattat------gcgaaatatcaatttaatctctgaatttatcag 2350537  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgt---cttgtacacgtggcaaga 272  Q
    |||| ||||||||||||||||| ||||| ||    |||||||||||||| ||||  |||||  ||||||||||||||||   ||||||||||||||||||    
T  2350536 acgttcatcaaaaaggtccctctgtccaagt----gctccgttagccatgctgacatgtcgctctgcatgctgtgttgtactcttgtacacgtggcaaga 2350441  T
Q  273 acgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttca 328  Q
    | ||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||    
T  2350440 aggaagccacgtgttcaaggactaatttgattgaattggaaaaagttcacttttca 2350385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 303
Target Start/End: Original strand, 4519377 - 4519594
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||  ||||||||||||||||||||| || ||| || ||||||||||| ||||||||      ||||||||||| |||||    ||||||||| ||    
T  4519377 agtgaacaatcaaattcgtccttgaatttttaccggttggccaaattcatccctcaattat------gcgaaatatcagcttagcctttgaatttgttag 4519470  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    || | |||||||||||||||||||||||  |    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||      
T  4519471 acattcatcaaaaaggtccctccgtccaaat----gctccgttagccatgctgatctgtcgccctgcatgctgtgttgtcttgtacacgtggcaaaaaga 4519566  T
Q  276 aagccacgtgttcaaggactaacttgat 303  Q
    ||| |||||||||||||||||| |||||    
T  4519567 aagtcacgtgttcaaggactaatttgat 4519594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 335
Target Start/End: Original strand, 10762582 - 10762831
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||| |||||||||||| ||||| ||||||  ||| ||||||||      ||||||| |||| ||  | ||||||||||||||    
T  10762582 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattat------gcgaaatttcaatttcatccctgaatttgtcag 10762675  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| ||||  ||||| |  |||||||||| |||| ||||| ||||||||||| |    
T  10762676 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaagg 10762771  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  10762772 aagccacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 10762831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 304
Target Start/End: Complemental strand, 10372829 - 10372611
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||| |||||||||||| ||||| ||||||  ||| ||||||||      |||||||||||| ||  | ||||||||||||||    
T  10372829 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattat------gcgaaatatcaatttcatccctgaatttgtcag 10372736  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | | |    ||||||||||||| ||||  ||||| | ||||||||||| |||||||||| ||||||||||| |    
T  10372735 acgtccatcaaaaaggtccctccgttaacgga----ctccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaaag 10372640  T
Q  276 aagccacgtgttcaaggactaacttgatt 304  Q
    |||||||||||||| |||| || ||||||    
T  10372639 aagccacgtgttcagggacgaatttgatt 10372611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 2693235 - 2693159
Alignment:
Q  227 tgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||| |||| || |||||||||||||||| |||||||||| |||||| | |||||||||| |||||||||| |||||    
T  2693235 tgatgtgtcatcttgcatgctgtgttgtcctgtacacgtgtcaagaaggcagccacgtgtacaaggactaatttgat 2693159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 4520541 - 4520451
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgt 172  Q
    |||||| | |||| |||||||||||||||| | | ||||| ||||||||||||||||      |||||||||||||||||||||| | |||||||||    
T  4520541 agtgaatcatcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaa------ttatgcgaaatatcaacttagttcttgaatttgt 4520451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 11255907 - 11255846
Alignment:
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  11255907 catgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 11255846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 41761809 - 41761748
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  41761809 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 41761748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 51012080 - 51012143
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| |||||||||||||||||||| ||| || | |||||||||| |||||||||| |||||    
T  51012080 tgcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 51012143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 49523185 - 49523246
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  ||||||| |||||||| ||||||||||||||    
T  49523185 tgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgtcca 49523246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 51011987 - 51012048
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | |||||  ||||||||  |||||||||||||||| ||||||||||||||    
T  51011987 tgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgtcca 51012048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 43778390 - 43778450
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| |||||||||||||||| ||||||||||||| ||| ||| ||||||||    
T  43778390 agtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattat 43778450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 13451041 - 13450982
Alignment:
Q  144 cgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||||||  |||| | ||||||| ||||||||||||||||| ||||||||| ||||    
T  13451041 cgaaatatcaaaatagtccttgaatttatcagacgtccatcaaaatggtccctccatcca 13450982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 51040757 - 51040796
Alignment:
Q  97 ttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  51040757 ttgaattttcacgggtcggccaaattcatccttcaattat 51040796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 25993653 - 25993714
Alignment:
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||| |||||||||||||||||||| ||| || |||||||||||| || |||| || |||||    
T  25993653 catgatgtgttgtcttgtacacgtgtcaacaatgaagccacgtgtacatggaccaatttgat 25993714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 27382266 - 27382335
Alignment:
Q  234 tcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||||||||   || ||||||||||||||| ||| ||  ||||||||||| |||||||||| |||||    
T  27382266 tcgtcctgcatgtcatggtgtcttgtacacgtgtcaacaagaaagccacgtgtacaaggactaatttgat 27382335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 43519485 - 43519546
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  || ||||||||||||   |||||||||||||    
T  43519485 tgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgtcca 43519546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 39085242 - 39085182
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| ||||||| |||||||| ||||||||||||| ||| ||| ||||||||    
T  39085242 agtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattat 39085182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 9e-52; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 76 - 335
Target Start/End: Original strand, 29077329 - 29077578
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||||||||||| |||||||||||| ||||| ||||||  ||| ||||||||      ||||||| |||| ||  | ||||||||||||||    
T  29077329 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattat------gcgaaatttcaatttcatccctgaatttgtcag 29077422  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| ||||  ||||| | |||||||||||||||||||||| ||||||||||| |    
T  29077423 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtcgccttgcatgctgtgttgtcttgtacgcgtggcaagaagg 29077518  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  29077519 aagccacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 29077578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 90 - 303
Target Start/End: Complemental strand, 3018541 - 3018338
Alignment:
Q  90 ttcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaa 189  Q
    ||||||| |||||||||||| ||||| ||| ||| ||| ||||||||      |||||||||||||||||| ||||||||||||||||||||||||||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattat------gcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaa 3018448  T
Q  190 ggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttca 289  Q
    ||||||||| |||    | ||||||||||||||||  |||||| ||||| |||||| ||||||||||||||| ||||||||||  |||||||| ||||||    
T  3018447 ggtccctccatcc----aagtgctccgttagccatgttgatctatcgtcttgcatgatgtgttgtcttgtacgcgtggcaagacggaagccacatgttca 3018352  T
Q  290 aggactaacttgat 303  Q
     |||| || |||||    
T  3018351 gggacgaatttgat 3018338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 335
Target Start/End: Original strand, 4641356 - 4641605
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || |||| |||||||||||||||||| ||||||| ||| |||||||| |      |||||||||| ||| | ||||||||| ||||    
T  4641356 agtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgt------gaaatatcaatttaatccctgaatttatcag 4641449  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    || ||||||||||||||||||||||  | |     |||||||||||||| ||||  |||   | ||||||||||| |||||||||| ||||||||||| |    
T  4641450 acctccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtttccttgcatgctgtgctgtcttgtacgcgtggcaagaagg 4641545  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  4641546 aagccacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 4641605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 76 - 335
Target Start/End: Original strand, 29112301 - 29112550
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || |||| |||||||||||| ||||| ||||||  ||| ||||||||      ||||||| |||| ||  | ||||||||||||||    
T  29112301 agtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccctcaattat------gcgaaatttcaatttcatccctgaatttgtcag 29112394  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    |||||||||||||||||||||||||  | |     |||||||||||||| ||||  ||||| |  |||||||||| |||| ||||| ||||||||||| |    
T  29112395 acgtccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaagg 29112490  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
    |||||||||||||| |||| || |||||||||||| |||||||||| |||||| ||||||    
T  29112491 aagccacgtgttcagggacgaatttgattgatttggaaaaagttcacttttcatttttca 29112550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 139 - 335
Target Start/End: Original strand, 2968197 - 2968389
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtc 238  Q
    |||||||||||||||| ||| | ||||||||| ||||||||||||||||||||||| |||||  | |     |||||||||||| | ||||  ||||| |    
T  2968197 ttatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccatccgttaacgg----gctccgttagccgtgctgacatgtcgcc 2968292  T
Q  239 ctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattgatttgaaaaaagttcaattttcacttttca 335  Q
     |||||| |||| |||||||||| ||||||||||| |||||||||||||||  ||| || |||||||||||| |||| ||||| |||||| ||||||    
T  2968293 ttgcatgttgtgctgtcttgtacgcgtggcaagaaggaagccacgtgttcagagacgaatttgattgatttggaaaatgttcacttttcatttttca 2968389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 303
Target Start/End: Original strand, 20523427 - 20523584
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctg 241  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||||   | ||  || |||||   |  |||| |||| || ||    
T  20523427 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca--aaagt--tctgttagtggtgatgatgtgtcttcttg 20523522  T
Q  242 catgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||| |||||||| |||||||||| ||| || | |||||||||| |||||||||| |||||    
T  20523523 catgccgtgttgtcctgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 20523584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 32439154 - 32439093
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  32439154 tgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 32439093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 13613645 - 13613584
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  13613645 tgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattagtccctccgtcca 13613584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 3456811 - 3456870
Alignment:
Q  144 cgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  3456811 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcca 3456870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 14338444 - 14338381
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||| ||||||||| |||||||||| ||| || |||||||||||| ||||||| || |||||    
T  14338444 tgcatgatgtgttgtcctgtacacgtgtcaacaaggaagccacgtgtacaaggaccaatttgat 14338381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 7049838 - 7049879
Alignment:
Q  162 cctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||||  |||||||||||||||| ||||||||||||||    
T  7049838 cctgaattttacagacgtccatcaaaatggtccctccgtcca 7049879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 7373021 - 7372960
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||  | ||||| |||||||||  ||| |||||||||||| ||||||||||||||    
T  7373021 tgcgaaatatttatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtcca 7372960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 9398721 - 9398782
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||| | ||||| |||||||||   |||||| |||||||| ||||||||||||||    
T  9398721 tgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtcca 9398782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 30639612 - 30639672
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattat 136  Q
    |||||| | |||| ||||||| |||||||||||||||||| ||||||  ||| ||||||||    
T  30639612 agtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattagtccctcaattat 30639672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 76 - 319
Target Start/End: Complemental strand, 6757 - 6524
Alignment:
Q  76 agtgaaccgtcaaattcgtccttgaattttcacgggtcggtcaaattcatccatcaattatatttatgcgaaatatcaacttagtacctgaatttgtcag 175  Q
    |||||||| |||| || |||| |||||||||||||||||| ||||||| ||| |||||||| |      |||||||||| ||| | ||||||||| ||||    
T  6757 agtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgt------gaaatatcaatttaatccctgaatttatcag 6664  T
Q  176 acgtccatcaaaaaggtccctccgtccatgtatgtgctccgttagccatactgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacg 275  Q
    || ||||||||||||||||||||||  | |     |||||||||||||| ||||  ||||  | ||||||||||| |||||||||| ||||||||||| |    
T  6663 acctccatcaaaaaggtccctccgttaacgg----gctccgttagccatgctgacatgtcaccttgcatgctgtgctgtcttgtacgcgtggcaagaagg 6568  T
Q  276 aagccacgtgttcaaggactaacttgattgatttgaaaaaagtt 319  Q
    |||||||||||||| |||| || |||||||||||| ||||||||    
T  6567 aagccacgtgttcagggacgaatttgattgatttggaaaaagtt 6524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 1417 - 1480
Alignment:
Q  240 tgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    ||||||||||||||||||||||||||| ||| || | | |||||||| |||||||||| |||||    
T  1417 tgcatgctgtgttgtcttgtacacgtgtcaacaaggcaaccacgtgtacaaggactaaattgat 1480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 1327 - 1385
Alignment:
Q  145 gaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    |||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  1327 gaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 4606 - 4680
Alignment:
Q  232 tgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgattga 306  Q
    ||||||||||||||   |||||||||||||||||| | | || |||||||||||| ||||||| || ||||||||    
T  4606 tgtcgtcctgcatggcttgttgtcttgtacacgtgtctacaaggaagccacgtgtacaaggaccaatttgattga 4680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 3355 - 3416
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  3355 tgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtcca 3416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 4527 - 4588
Alignment:
Q  142 tgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaaaaaggtccctccgtcca 203  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||   |||||||||||||    
T  4527 tgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtcca 4588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 2156 - 2203
Alignment:
Q  139 ttatgcgaaatatcaacttagtacctgaatttgtcagacgtccatcaa 186  Q
    |||||||||||||||||||| | ||| ||||||||||||||| |||||    
T  2156 ttatgcgaaatatcaacttaatccctaaatttgtcagacgtcaatcaa 2203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 8422 - 8478
Alignment:
Q  247 tgtgttgtcttgtacacgtggcaagaacgaagccacgtgttcaaggactaacttgat 303  Q
    |||||||||||||||||||| ||| || | |||||||||| |||| ||||| |||||    
T  8422 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaagtactaaattgat 8478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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