View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11008_low_39 (Length: 307)

Name: NF11008_low_39
Description: NF11008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11008_low_39
NF11008_low_39
[»] chr8 (11 HSPs)
chr8 (69-265)||(42897421-42897617)
chr8 (69-265)||(37525675-37525868)
chr8 (118-265)||(32822641-32822788)
chr8 (83-227)||(8654815-8654958)
chr8 (91-265)||(31821687-31821856)
chr8 (81-265)||(33750050-33750229)
chr8 (144-265)||(38882518-38882639)
chr8 (165-265)||(462114-462214)
chr8 (144-216)||(31200875-31200947)
chr8 (144-199)||(9184734-9184789)
chr8 (144-199)||(11721489-11721544)
[»] chr5 (11 HSPs)
chr5 (69-265)||(38177740-38177936)
chr5 (69-265)||(38204964-38205160)
chr5 (69-265)||(35292035-35292231)
chr5 (149-265)||(32838236-32838352)
chr5 (69-216)||(43317721-43317868)
chr5 (83-265)||(35395609-35395786)
chr5 (69-153)||(32836998-32837082)
chr5 (81-264)||(18728268-18728446)
chr5 (81-260)||(33256683-33256857)
chr5 (81-257)||(32087801-32087972)
chr5 (142-256)||(6114888-6115002)
[»] chr2 (11 HSPs)
chr2 (69-265)||(37417558-37417754)
chr2 (69-265)||(42879595-42879792)
chr2 (81-261)||(42001893-42002072)
chr2 (144-265)||(39803-39924)
chr2 (81-265)||(39064-39243)
chr2 (159-265)||(25619943-25620049)
chr2 (84-265)||(92016-92193)
chr2 (144-264)||(15372780-15372900)
chr2 (81-260)||(29909328-29909502)
chr2 (144-216)||(41706859-41706931)
chr2 (91-197)||(15432673-15432779)
[»] chr3 (16 HSPs)
chr3 (69-265)||(23774431-23774623)
chr3 (69-265)||(48634161-48634354)
chr3 (69-257)||(33112834-33113022)
chr3 (118-265)||(24382588-24382735)
chr3 (81-265)||(45898043-45898222)
chr3 (69-257)||(31887100-31887288)
chr3 (83-265)||(18429939-18430121)
chr3 (83-261)||(33852344-33852518)
chr3 (81-243)||(41020663-41020825)
chr3 (144-265)||(2977053-2977174)
chr3 (84-264)||(23888442-23888617)
chr3 (83-265)||(45256888-45257065)
chr3 (144-222)||(54093011-54093089)
chr3 (144-221)||(26449021-26449098)
chr3 (230-265)||(40508738-40508773)
chr3 (160-206)||(1846124-1846170)
[»] chr1 (12 HSPs)
chr1 (69-257)||(18183598-18183786)
chr1 (103-263)||(6575448-6575608)
chr1 (118-265)||(35479669-35479816)
chr1 (83-265)||(42134759-42134941)
chr1 (81-264)||(46638473-46638651)
chr1 (84-244)||(45380646-45380806)
chr1 (81-265)||(47269116-47269300)
chr1 (81-261)||(31801916-31802091)
chr1 (83-265)||(44158066-44158245)
chr1 (171-264)||(27940889-27940982)
chr1 (81-265)||(36895177-36895356)
chr1 (81-207)||(33682889-33683006)
[»] chr7 (12 HSPs)
chr7 (81-265)||(23954085-23954269)
chr7 (69-265)||(40784626-40784822)
chr7 (128-265)||(2167753-2167890)
chr7 (72-257)||(27955657-27955841)
chr7 (109-265)||(46812271-46812427)
chr7 (118-265)||(33038503-33038650)
chr7 (144-265)||(8423004-8423125)
chr7 (144-265)||(35344013-35344134)
chr7 (144-265)||(38613744-38613865)
chr7 (81-222)||(46996368-46996512)
chr7 (83-265)||(47341355-47341534)
chr7 (141-199)||(48704516-48704574)
[»] chr4 (11 HSPs)
chr4 (103-265)||(27625070-27625232)
chr4 (103-264)||(44558174-44558335)
chr4 (81-265)||(2827683-2827862)
chr4 (81-265)||(35996343-35996527)
chr4 (144-257)||(4519656-4519769)
chr4 (84-265)||(10372339-10372520)
chr4 (109-265)||(2350199-2350355)
chr4 (81-265)||(10762861-10763045)
chr4 (144-265)||(44794483-44794604)
chr4 (133-265)||(51041645-51041777)
chr4 (141-199)||(25993847-25993905)
[»] chr6 (7 HSPs)
chr6 (81-243)||(29077630-29077792)
chr6 (81-265)||(29112580-29112764)
chr6 (144-265)||(2968405-2968526)
chr6 (144-264)||(4641636-4641756)
chr6 (118-225)||(30641033-30641137)
chr6 (142-205)||(4314597-4314660)
chr6 (144-216)||(25171831-25171903)


Alignment Details
Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 69 - 265
Target Start/End: Original strand, 42897421 - 42897617
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  42897421 ttgataaattagaggaaaggtgttacctttaaccacagccgaacacaacaacttcaaaaacgtgagaatcgtcgaagatgatgatggttttggagtggtg 42897520  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  42897521 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagagaaatgtgaggaaggaagtatcggtaatgcaggggc 42897617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 69 - 265
Target Start/End: Original strand, 37525675 - 37525868
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    |||||||| || |||||| |||||||||||||||||||| |||||||| ||||||| | |||||||||| | |  ||||||||||| |||||||| ||||    
T  37525675 ttgataaactataggaaatgtgttacctttaaccacaaccgaacacaaaaacttcacagacgtgagaatcgccagagatgatgatgattttggaggggtg 37525774  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||| ||||||||||||||||||||||||||||||||  | ||||||||| || ||||  ||||||   |||||| |||||||||||||| ||||    
T  37525775 agaatgaagaaagttttagcgggaaggagaagagtcaaggccattttttatgcttatgagtgaaatgt---gaaggaggtatgggtaatgcatgggc 37525868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 118 - 265
Target Start/End: Complemental strand, 32822788 - 32822641
Alignment:
Q  118 aacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgtttttt 217  Q
    |||||||||||||| ||||| |||| ||||||||||| ||||| ||||| ||||||| | |||||||||| |||||||||||| |||||  |||||||||    
T  32822788 aacttcaaaaacgtcagaatcgtcggagatgatgatgattttgaagaggcgagaatgaataaagttttagtgggaaggagaagggtcaatgacgtttttt 32822689  T
Q  218 atgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    || |||||||   |||||||| |||||| |||||||||||| ||||||    
T  32822688 atttttctgactgaaatgtgaagaaggaggtatgggtaatgtaggggc 32822641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 8654958 - 8654815
Alignment:
Q  83 gaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagt 182  Q
    |||||| ||||||||| | ||||   |||||||  ||||||||||| || ||||||| || ||||||||||| |||||||| ||||||||||||||||||    
T  8654958 gaaaggcgttacctttgatcacagtcgaacacaggaacttcaaaaatgtcagaattg-cggagatgatgatgattttggaggggtgagaatggagaaagt 8654860  T
Q  183 tttagcgggaaggagaagagtcaagaacgttttttatgtttctga 227  Q
    ||||||||||||||||||||||||  | |||||| ||||||||||    
T  8654859 tttagcgggaaggagaagagtcaatgatgtttttgatgtttctga 8654815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 91 - 265
Target Start/End: Complemental strand, 31821856 - 31821687
Alignment:
Q  91 ttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgg 190  Q
    |||||||||| |||||| |||||||  ||||||||||| || ||||| | || ||||||||||| |||||||| ||||| ||||||| |||||||||||     
T  31821856 ttacctttaatcacaaccgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcga 31821757  T
Q  191 gaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
     ||| ||||| |||||| || ||||||||||| ||||    ||||||| |||||| |||||||||||||| ||||    
T  31821756 taagaagaagggtcaaggacattttttatgtt-ctga----aatgtgaagaaggatgtatgggtaatgcaagggc 31821687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 265
Target Start/End: Original strand, 33750050 - 33750229
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||||| || | | |||||||  ||||||||||| || |||||  ||| ||||||||||| |||||||| ||||| |||| || ||    
T  33750050 aggaaaggtgttacctttaatcagagcagaacacacaaacttcaaaaatgtcagaatcatcggagatgatgatgattttggaggggtgaaaatgaaggaa 33750149  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||| |||| | ||| |||||| |||||||| |||||      | |||||||| |||||| |||||||||||||||||||    
T  33750150 gttttagcgagaagaaaaagggtcaaggacgtttttgatgtt-----cagaaatgtgaagaaggaggtatgggtaatgcaggggc 33750229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 38882518 - 38882639
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||| |||||||| ||||| ||||||||| | ||||| |||||||||||| |||||  ||||||||||||||||||||  ||| |||  ||||    
T  38882518 agatgatgatgattttggagcggtgaaaatggagaaggctttagtgggaaggagaagggtcaatgacgttttttatgtttctgagtgaaaagtggggaag 38882617  T
Q  244 gaagtatgggtaatgcaggggc 265  Q
    || ||||||||||| |||||||    
T  38882618 gaggtatgggtaatacaggggc 38882639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 462114 - 462214
Alignment:
Q  165 ggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcagggg 264  Q
    |||||||||||||||||||||||||||||||||||| |||||  ||||| ||||||||||||||  || || || |||||| |||||||||| |||||||    
T  462114 ggtgagaatggagaaagttttagcgggaaggagaagggtcaatgacgttctttatgtttctgagtgaactgcgaagaaggaggtatgggtaacgcagggg 462213  T
Q  265 c 265  Q
    |    
T  462214 c 462214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 31200875 - 31200947
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttt 216  Q
    ||||||||||| |||||||| ||||| ||||||||| ||||||||||||| ||||| ||||||| | ||||||    
T  31200875 agatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaagagaaaagtcaaggatgttttt 31200947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 9184789 - 9184734
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaa 199  Q
    ||||||||||| ||||||||||||||  |||  ||| |||||||||||||||||||    
T  9184789 agatgatgatgattttggagaggtgaagatgatgaaggttttagcgggaaggagaa 9184734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 11721489 - 11721544
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaa 199  Q
    ||||||||||| ||||||||||||||  | || ||| |||||||||||||||||||    
T  11721489 agatgatgatgattttggagaggtgaagaaggtgaaggttttagcgggaaggagaa 11721544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 1e-90; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 69 - 265
Target Start/End: Original strand, 38177740 - 38177936
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  38177740 ttgataaattagaggaaaggtgttacctttaaccacaaccgaacacaacaacttcaaaaacgtgagaatcatcgaagatgatgatggttttggagaggtg 38177839  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  38177840 agaatggagaaagttttagcaggaaggagaagagtcaaggacgttttttatgtttctgagagaaatgtgaggaaggaagtatgggtaatgcaggggc 38177936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 69 - 265
Target Start/End: Original strand, 38204964 - 38205160
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  38204964 ttgataaattagaggaaaggtgttacctttaaccacaaccgaacacaacaacttcaaaaacgtgagaatcatcgaagatgatgatggttttggagaggtg 38205063  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  38205064 agaatggagaaagttttagcaggaaggagaagagtcaaggacgttttttatgtttctgagagaaatgtgaggaaggaagtatgggtaatgcaggggc 38205160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 265
Target Start/End: Original strand, 35292035 - 35292231
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    |||||||| |||||||||||| ||||||||||||||| | |||||||  ||||| |||||||||||||| | || ||||||||||| |||||||||||||    
T  35292035 ttgataaactagaggaaaggttttacctttaaccacagccgaacacagaaactttaaaaacgtgagaatcgccggagatgatgatgattttggagaggtg 35292134  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||||||||||||| ||||||||||||  ||||| | |||||| |||||||||||   ||||||| |||||| ||||||||||| |||||||    
T  35292135 agaatggagaaagttttagggggaaggagaaggatcaaggatgtttttgatgtttctgagtggaatgtgaggaaggaggtatgggtaatacaggggc 35292231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 32838236 - 32838352
Alignment:
Q  149 atgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagt 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||    
T  32838236 atgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagagaaatgtgaggaaggaagt 32838335  T
Q  249 atgggtaatgcaggggc 265  Q
    |||||||||||||||||    
T  32838336 atgggtaatgcaggggc 32838352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 43317721 - 43317868
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||  || |||||||||  |||||| | || ||||||||||| |||||| ||||||    
T  43317721 ttgataaactagaggaaaggtgttacctttaaccacaaccgaacacagaaatttcaaaaacaagagaatcgccggagatgatgatgattttggggaggtg 43317820  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttt 216  Q
    ||||||||||||||||||| ||| |||||||| |||||| | ||||||    
T  43317821 agaatggagaaagttttaggggggaggagaagggtcaaggatgttttt 43317868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 83 - 265
Target Start/End: Complemental strand, 35395786 - 35395609
Alignment:
Q  83 gaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagt 182  Q
    |||||| ||||||||||| |||| | |||||||  ||||||||||| || ||||| |||| ||||||||||| |||||||| ||||| ||||||| ||||    
T  35395786 gaaaggcgttacctttaatcacagccgaacacacaaacttcaaaaatgtcagaatcgtcggagatgatgatgattttggaggggtgaaaatggaggaagt 35395687  T
Q  183 tttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||||||| ||||| |||||| |||| ||| ||||| ||||    ||||||| |||||| |||||||||||||||||||    
T  35395686 tttagcgggaagaagaagggtcaaggacgtgtttgatgtt-ctga----aatgtgaagaaggaggtatgggtaatgcaggggc 35395609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 32836998 - 32837082
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgat 153  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| |||||||||||||||    
T  32836998 ttgataaattagaggaaaggtgttacctttaaccacagccgaacacaacaacttcaaaaacgtgaaaatcgtcgaagatgatgat 32837082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 81 - 264
Target Start/End: Original strand, 18728268 - 18728446
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    ||||||||  |||||||||| |||| | |||||||  ||||||||||| |  ||||| | || ||||||||||| |||||||| ||||| ||||||| ||    
T  18728268 aggaaaggcattacctttaatcacagccgaacacacaaacttcaaaaatggtagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaa 18728367  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcagggg 264  Q
    ||||||||| |||| ||||| |||||  |||||||| ||||| ||||    ||||||| |||||| ||||||||||||||||||    
T  18728368 gttttagcgagaagaagaagggtcaaagacgtttttgatgtt-ctga----aatgtgaagaaggaggtatgggtaatgcagggg 18728446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 260
Target Start/End: Complemental strand, 33256857 - 33256683
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||| ||||||||||| |||||| |||||||  ||||||||||| || | ||| | || ||||||||||| |||||||| ||||| ||||||| ||    
T  33256857 aggaaaggcgttacctttaatcacaaccgaacacacaaacttcaaaaatgtcaaaatcgccggagatgatgatgattttggaggggtgaaaatggaggaa 33256758  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgca 260  Q
    ||||||| | |||| ||||| ||||||  ||||||| ||| |||||     ||||||| |||||| ||||||||||||||    
T  33256757 gttttagtgagaagaagaagtgtcaaggtcgtttttgatg-ttctg----gaatgtgaagaaggaggtatgggtaatgca 33256683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 257
Target Start/End: Complemental strand, 32087972 - 32087801
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||||| |||| | |||||||  ||||||||||| |  | ||| |  | ||||||||||| |||||||| ||||  ||||||| ||    
T  32087972 aggaaaggtgttacctttaatcacagccgaacacacaaacttcaaaaatggtataatcgctggagatgatgatgattttggaggggtggaaatggaggaa 32087873  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaat 257  Q
    ||||||||| |||| ||||| |||||| |||||||| ||||| ||||    ||||||| |||||| |||||||||||    
T  32087872 gttttagcgagaagaagaagggtcaaggacgtttttgatgtt-ctga----aatgtgaagaaggaggtatgggtaat 32087801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 6115002 - 6114888
Alignment:
Q  142 gaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacga 241  Q
    |||||||||| || |||||||||| |||  ||||  || |||||||||| |||||||||||||||| ||    || ||||||||||  ||||||||| ||    
T  6115002 gaagatgatggtgcttttggagagatgaagatggttaaggttttagcggaaaggagaagagtcaaggaccggattgatgtttctgaataaaatgtgagga 6114903  T
Q  242 aggaagtatgggtaa 256  Q
     ||||| ||||||||    
T  6114902 tggaaggatgggtaa 6114888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 69 - 265
Target Start/End: Complemental strand, 37417754 - 37417558
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37417754 ttgataaattagaggaaaggtgttacctttaaccacagccgaacacaacaacttcaaaaacgtgagaatcgtcgaagatgatgatggttttggagaggtg 37417655  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||| | ||||||||||||||||||| ||||    
T  37417654 agaatggagacagttttagcgggaaggagaagagtcaaggacgtttttgatgtttctgagagaaatgtgagggaggaagtatgggtaatgcacgggc 37417558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 69 - 265
Target Start/End: Complemental strand, 42879792 - 42879595
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  42879792 ttgataaattagaggaaaggtgttacctttaaccacaaccgaacacaacaacttcaaaaacgtgagaatcgttgaagatgatgatggttttggagaggtg 42879693  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacg-ttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||||||||||||||  ||| ||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  42879692 agaatggagaaagttttagcaagaaagagaagagtcaaggacgtttttttatgtttctgagagaaatgtgaggaaggaagtatgggtaatgcatgggc 42879595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 81 - 261
Target Start/End: Complemental strand, 42002072 - 42001893
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||||| |||| | |||||||  |||||||||||||| | ||| | || ||||||||||| |||||||| ||||| ||||| ||||    
T  42002072 aggaaaggtgttacctttaatcacagccgaacacagaaacttcaaaaacgtaataatcgccggagatgatgatg-ttttggaggggtgataatggggaaa 42001974  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcag 261  Q
    ||||||||||||||||||||  ||||  | |||||| ||||||||||   |||||||| |||||| |||||||||||||||    
T  42001973 gttttagcgggaaggagaaggatcaatgatgtttttgatgtttctgactgaaatgtgaagaaggaggtatgggtaatgcag 42001893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 39924 - 39803
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||  ||||||||| ||||    
T  39924 agatgatgatgattttggaggggtgagaatggagaaagttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgactaaaatgtgaagaag 39825  T
Q  244 gaagtatgggtaatgcaggggc 265  Q
    || | ||  |||||||||||||    
T  39824 gaggaatatgtaatgcaggggc 39803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 81 - 265
Target Start/End: Original strand, 39064 - 39243
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||||| |||| | |||||||  |||||||||||  | ||||| |||| | ||||||||| |||||||| ||||| ||||||| ||    
T  39064 aggaaaggtgttacctttaatcacagccgaacacacaaacttcaaaaatttcagaatcgtcggacatgatgatgattttggaggggtgaaaatggaggaa 39163  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    || |||||| |||| ||||| |||||| |||||||||||||| ||||    ||||||| |||||| |||||||||||||||||||    
T  39164 gtattagcgagaagaagaagggtcaaggacgttttttatgtt-ctga----aatgtgaagaaggaggtatgggtaatgcaggggc 39243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 159 - 265
Target Start/End: Complemental strand, 25620049 - 25619943
Alignment:
Q  159 tggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatg 258  Q
    ||||| |||||||||||||||||||||| ||  ||||||||| |||||| ||||||||||||||||||||  |||||||| |||||| ||||||||||||    
T  25620049 tggaggggtgagaatggagaaagttttatcgaaaaggagaagggtcaaggacgttttttatgtttctgagtgaaatgtgaagaaggaggtatgggtaatg 25619950  T
Q  259 caggggc 265  Q
    |||||||    
T  25619949 caggggc 25619943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 265
Target Start/End: Original strand, 92016 - 92193
Alignment:
Q  84 aaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagtt 183  Q
    ||||||||||||||||| |||| | |||||||  ||||||||||| || ||||| |||| ||||||||||| |||||||| ||||| ||||||| ||||     
T  92016 aaaggtgttacctttaatcacagccgaacacacaaacttcaaaaatgtcagaatcgtcggagatgatgatgattttggaggggtgaaaatggaggaagta 92115  T
Q  184 ttagcgggaaggagaagagtcaagaacgtttttt-atgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||| |||| ||||| |||||| ||||||||| ||||| ||||    ||||||| |||||| |||||||||||||| ||||    
T  92116 ttagcgagaagaagaagggtcaaggacgtttttttatgtt-ctga----aatgtgaagaaggaggtatgggtaatgcaagggc 92193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 264
Target Start/End: Complemental strand, 15372900 - 15372780
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||| |||||||| | ||| ||||||||| ||||||||||||||||||||||||||  | |||||| ||||||||||| ||||||||| ||||    
T  15372900 agatgatgatgattttggagggttgacaatggagaacgttttagcgggaaggagaagagtcaatgatgtttttgatgtttctgagtaaaatgtgaagaag 15372801  T
Q  244 gaagtatgggtaatgcagggg 264  Q
    || | ||  ||||||||||||    
T  15372800 gaggaatatgtaatgcagggg 15372780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 81 - 260
Target Start/End: Original strand, 29909328 - 29909502
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||  ||||||||||| ||||   |||||||  |||||||||||||| |||||   || ||||||||||  |||||||| ||||| ||||||| ||    
T  29909328 aggaaagacgttacctttaatcacagtcgaacacacaaacttcaaaaacgtcagaatcaccggagatgatgataattttggaggggtgaaaatggaggaa 29909427  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgca 260  Q
    |||||||||||||| ||||| |||||| |||||||| ||||| ||||    ||||||| |||||| ||||||||||||||    
T  29909428 gttttagcgggaagaagaagggtcaaggacgtttttgatgtt-ctga----aatgtgaagaaggaggtatgggtaatgca 29909502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 41706931 - 41706859
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttt 216  Q
    ||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||||||||||| | ||||||    
T  41706931 agatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaaggatgttttt 41706859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 15432779 - 15432673
Alignment:
Q  91 ttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgg 190  Q
    ||||||||||  ||| | |||||||  |||||||||||||| ||||| | ||  |||||||||| |||||||| ||||||||||| |||||||| |||||    
T  15432779 ttacctttaattacagccgaacacagaaacttcaaaaacgtcagaatcgccggtgatgatgatgattttggaggggtgagaatggtgaaagtttgagcgg 15432680  T
Q  191 gaaggag 197  Q
    |||||||    
T  15432679 gaaggag 15432673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 1e-75; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 69 - 265
Target Start/End: Complemental strand, 23774623 - 23774431
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    |||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  23774623 ttgataaattagaggaaatgtgttacctttaaccacagccgaacacaacaacttcaagaacatgagaatcgtcgaagatgatgatggttttggagaggtg 23774524  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||     |||||||||||||||||||||||    
T  23774523 agaatggagaaagttttagcgggaaggagaagagtcaaggacgttttttatgtttctgagagaaatgtg----gggaagtatgggtaatgcaggggc 23774431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 69 - 265
Target Start/End: Complemental strand, 48634354 - 48634161
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||| |||| ||||||||   ||||||||||||||    
T  48634354 ttgataaattagaggaaaggtgttacctttaaccacagccgaacacaacaacttcaaaaacgtgcgaatcgtcggagatgatg---gttttggagaggtg 48634258  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||| |||||||| |||||||||| || ||||||||||||    
T  48634257 agaatggagaaagttttagcgggaaggagaagagtcaaggacgtttttgatgtttttgagagaaatgtgaggaaggaagtaaggataatgcaggggc 48634161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 33112834 - 33113022
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    |||||||| ||||||||||||||||||||||||||||   |||||||  |||||||||||||||||||| |  | ||||||||||| |||||||||||||    
T  33112834 ttgataaactagaggaaaggtgttacctttaaccacagtcgaacacagaaacttcaaaaacgtgagaatcgctggagatgatgatgattttggagaggtg 33112933  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaat 257  Q
    ||||||||||||||||||||||||| |||||| ||||   ||||||||||||||| ||||  |||||||| |||||| |||||||||||    
T  33112934 agaatggagaaagttttagcgggaatgagaagggtcagagacgttttttatgtttatgagtgaaatgtgaggaaggaggtatgggtaat 33113022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 118 - 265
Target Start/End: Original strand, 24382588 - 24382735
Alignment:
Q  118 aacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgtttttt 217  Q
    ||||| |||||||||||||| |||| ||||||||||| ||||| || ||||| ||||||||| |||||||||||||||||||||| |||  |||||||||    
T  24382588 aactttaaaaacgtgagaatcgtcggagatgatgatgattttgaaggggtgaaaatggagaatgttttagcgggaaggagaagagacaatgacgtttttt 24382687  T
Q  218 atgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||||||  |||||||| |||||| |||||||||||||||||||    
T  24382688 atgtttctgagtgaaatgtgaagaaggaggtatgggtaatgcaggggc 24382735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 81 - 265
Target Start/End: Original strand, 45898043 - 45898222
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||| ||||||||||||| |||||| |||||||  ||||||||||| || ||||| | || ||||||||||| |||||||| ||||| ||||||| ||    
T  45898043 aggaaatgtgttacctttaatcacaaccgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgtttttggaggggtgaaaatggaggaa 45898142  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||| |||| ||||| |||||| |||||||| ||||| ||||    ||||||| |||||| |||||||||||||||||||    
T  45898143 gttttagcgagaagaagaagggtcaaggacgtttttgatgtt-ctga----aatgtgaagaaggaggtatgggtaatgcaggggc 45898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 31887100 - 31887288
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    |||||||| |||||||||||||||||||||| ||||| | |||||||  |||||||||| || |||||| | || |||||| |||| ||||  |||||||    
T  31887100 ttgataaactagaggaaaggtgttacctttagccacagccgaacacagaaacttcaaaaccgcgagaatcgccggagatgacgatgattttatagaggtg 31887199  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaat 257  Q
     ||||||||||||||||||||||||||||||   ||||  |||||||| || ||| ||||  |||||||| |||||| ||||| |||||    
T  31887200 ggaatggagaaagttttagcgggaaggagaatgttcaatgacgtttttgatatttttgagtgaaatgtgaggaaggaggtatgagtaat 31887288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 265
Target Start/End: Original strand, 18429939 - 18430121
Alignment:
Q  83 gaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagt 182  Q
    |||||||||||||||||| |||| | |||||||  |||||||||||||| | ||| | ||  |||||||||| |||||||| ||||||||||||||||||    
T  18429939 gaaaggtgttacctttaatcacagccgaacacagaaacttcaaaaacgtcaaaatcgccggtgatgatgatgattttggaggggtgagaatggagaaagt 18430038  T
Q  183 tttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||| || | |||  |||||| | |||||| ||| ||||||   |||||||| ||| || |||||||||||||||||||    
T  18430039 tttagcggaaatgtgaaaggtcaaggatgtttttgatgcttctgactgaaatgtgaagaatgaggtatgggtaatgcaggggc 18430121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 83 - 261
Target Start/End: Original strand, 33852344 - 33852518
Alignment:
Q  83 gaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagt 182  Q
    |||||| ||||||||||| |||| |  ||||||  |||||||||||||| ||||| | ||  |||||||||| |||||||| ||||||||||||||||||    
T  33852344 gaaaggcgttacctttaatcacagcc-aacacagaaacttcaaaaacgtcagaatcgccggtgatgatgatgattttggaggggtgagaatggagaaagt 33852442  T
Q  183 tttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcag 261  Q
    |||||||| |||| ||| ||||||| | |||||||||||||||||   ||||||   |||||| |||||||||||||||    
T  33852443 tttagcggaaaggtgaaaagtcaaggatgttttttatgtttctgactgaaatgt---gaaggaggtatgggtaatgcag 33852518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 41020663 - 41020825
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||| | |||    |||||||  ||||||||| |||  ||||| |  | ||||||||||| |||||||| ||||| |||||||||     
T  41020663 aggaaaggtgttacctttgatcacggtcgaacacaggaacttcaaacacgccagaatcgatggagatgatgatgattttggaggggtgacaatggagaac 41020762  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||| ||||    
T  41020763 gttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgagtaaaatgtgaagaag 41020825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 2977053 - 2977174
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||||| |||| |||| ||||| |||||||||||  |||||||| ||||    
T  2977053 agatgatgatgattttggagaggtgagaatggagaaggtttttgcgggaagaagaagggtcacgaacatttttgatgtttctgagtgaaatgtgaggaag 2977152  T
Q  244 gaagtatgggtaatgcaggggc 265  Q
    || ||||| ||||| |||||||    
T  2977153 gaggtatgagtaatacaggggc 2977174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 264
Target Start/End: Original strand, 23888442 - 23888617
Alignment:
Q  84 aaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagtt 183  Q
    ||||| ||||||||||| |||||| |||||||  ||||| ||||| || ||||| |||| ||||||||||| |||||||| ||||| ||||||| |||||    
T  23888442 aaaggcgttacctttaatcacaaccgaacacacaaacttaaaaaatgtcagaatcgtcggagatgatgatgattttggaggggtgaaaatggaggaagtt 23888541  T
Q  184 ttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcagggg 264  Q
    |||||| |||| ||||| ||||||  ||||||| ||||| ||||    ||||||| ||| ||  |||||||||||||||||    
T  23888542 ttagcgagaagaagaagggtcaaggtcgtttttgatgtt-ctga----aatgtgaagaaagagatatgggtaatgcagggg 23888617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 265
Target Start/End: Original strand, 45256888 - 45257065
Alignment:
Q  83 gaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagt 182  Q
    |||||| ||||||||||| |||| | ||||| |  |||||||||||||| ||||| | |   || ||||||| |||||||| ||||||||||||||||||    
T  45256888 gaaaggcgttacctttaatcacagccgaacatagaaacttcaaaaacgtcagaatcgccagtga-gatgatgattttggaggggtgagaatggagaaagt 45256986  T
Q  183 tttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||| ||||  ||  |||||| | |||||| |||||| |||  |||||||   |||||| |||||||||||||||||||    
T  45256987 tttagcggaaaggtaaaaggtcaaggatgtttttgatgttt-tgactaaaatgt---gaaggatgtatgggtaatgcaggggc 45257065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 54093089 - 54093011
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtt 222  Q
    ||||||||||| |||||||||||||| ||||  ||| |||||||||||||||||||  |||| | ||||||||||||||    
T  54093089 agatgatgatgattttggagaggtgaaaatgatgaaggttttagcgggaaggagaaaggtcatggacgttttttatgtt 54093011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 26449021 - 26449098
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgt 221  Q
    ||||||||||| ||||||||||||||  |||| ||| |||||||||| ||||||||  |||| |||||| ||| ||||    
T  26449021 agatgatgatgattttggagaggtgaagatggtgaaggttttagcggaaaggagaaaggtcaggaacgtgtttgatgt 26449098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 265
Target Start/End: Original strand, 40508738 - 40508773
Alignment:
Q  230 aaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||| ||||||||||||||||||||||||||    
T  40508738 aaaatgtgaggaaggaagtatgggtaatgcaggggc 40508773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 1846170 - 1846124
Alignment:
Q  160 ggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaa 206  Q
    |||||||| |||||||||||| |||||||||||| |||||| |||||    
T  1846170 ggagaggtcagaatggagaaaattttagcgggaaagagaagggtcaa 1846124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 69 - 257
Target Start/End: Original strand, 18183598 - 18183786
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||  |||||||||||||||||||| | || ||||||||||| |||||||||||||    
T  18183598 ttgataaactagaggaaaggtgttacctttaaccacagccgaacacagaaacttcaaaaacgtgagaatcgccggagatgatgatgattttggagaggtg 18183697  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaat 257  Q
    |||||||||||||||||||||||||||||||| |||||  |||||||| |||||||||||  |||||| | |||||| |||||||||||    
T  18183698 agaatggagaaagttttagcgggaaggagaagggtcaatgacgtttttgatgtttctgagtgaaatgtaaggaaggaggtatgggtaat 18183786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 103 - 263
Target Start/End: Complemental strand, 6575608 - 6575448
Alignment:
Q  103 acaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagag 202  Q
    ||||| |||||||  |||||||||||||| |||||  ||| ||||||||||| |||||||| |||||||||||| |||||||||| |||||||||||| |    
T  6575608 acaaccgaacacataaacttcaaaaacgtcagaatcatcggagatgatgatgattttggaggggtgagaatggataaagttttagtgggaaggagaaggg 6575509  T
Q  203 tcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggg 263  Q
    ||||| ||||||||||| ||||| |   |||||||| |||||| |||||||||||||||||    
T  6575508 tcaaggacgttttttatttttctaactgaaatgtgaagaaggaggtatgggtaatgcaggg 6575448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 118 - 265
Target Start/End: Original strand, 35479669 - 35479816
Alignment:
Q  118 aacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgtttttt 217  Q
    |||||||||||| | ||||| |||||||||||||||| ||||||||||| ||||||| | |||||||||| |||||||||||| |||||| |||||||||    
T  35479669 aacttcaaaaacatcagaatcgtcgaagatgatgatgattttggagaggcgagaatgaataaagttttagtgggaaggagaagggtcaaggacgtttttt 35479768  T
Q  218 atgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    || |||||||   |||| ||| |||||| |||||||||||| ||||||    
T  35479769 atttttctgactgaaatatgaagaaggatgtatgggtaatgtaggggc 35479816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 265
Target Start/End: Complemental strand, 42134941 - 42134759
Alignment:
Q  83 gaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagt 182  Q
    |||||||||||||||||| |||| | |||||||  |||||||||||||| ||||| | ||| ||| |||||| |||||||| ||||||||||||||||||    
T  42134941 gaaaggtgttacctttaatcacatccgaacacataaacttcaaaaacgtcagaatcgccgatgattatgatgattttggaggggtgagaatggagaaagt 42134842  T
Q  183 tttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||| |||  |||  |||||| | |||||| ||||||||||   |||||||| ||| || ||||||||||||| |||||    
T  42134841 tttagcggaaagatgaaaggtcaaggatgtttttgatgtttctgactgaaatgtgaagaaagaggtatgggtaatgccggggc 42134759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 264
Target Start/End: Original strand, 46638473 - 46638651
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||| ||||||||||||| |||| | |||||||  ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| ||||||| ||    
T  46638473 aggaaatgtgttacctttaatcacagccgaacacacaaacttcaaaaatgtcagaatcgtcgaagatgatgatgattttggaggggtgaaaatggaggaa 46638572  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcagggg 264  Q
    |||||||||  ||| ||||| |||||  |||||||| ||||| ||||    ||||||| ||||||  ||||| |||||||||||    
T  46638573 gttttagcgaaaagaagaagggtcaaagacgtttttgatgtt-ctga----aatgtgaagaaggagttatggataatgcagggg 46638651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 84 - 244
Target Start/End: Original strand, 45380646 - 45380806
Alignment:
Q  84 aaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagtt 183  Q
    ||||| ||||||||||| |||| | |||||||  |||||||||||||| ||||| | ||  |||||||||| |||||||| |||||||||||||||||||    
T  45380646 aaaggcgttacctttaatcacagccgaacacataaacttcaaaaacgtcagaatcgccggtgatgatgatgattttggaggggtgagaatggagaaagtt 45380745  T
Q  184 ttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaagg 244  Q
    ||||||| || | |||  |||||| | |||||| ||||||||||   |||||||| |||||    
T  45380746 ttagcggaaatgtgaaaggtcaaggatgtttttgatgtttctgactgaaatgtgaagaagg 45380806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 265
Target Start/End: Original strand, 47269116 - 47269300
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||| | |||    |||||||  ||||||||| |||  ||||| |  | |||||| |||| |||||||| ||||| |||||||||     
T  47269116 aggaaaggtgttacctttgatcacggtcgaacacaggaacttcaaacacgccagaatcgatggagatgaggatgattttggaggggtgaaaatggagaac 47269215  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||||||||||||||||||||| | |||||| ||| ||||||| ||||||||| |||| | | ||  |||||||||||||    
T  47269216 gttttagcgggaaggagaagagtcaaggatgtttttgatggttctgagtaaaatgtgaagaagaaggaatatgtaatgcaggggc 47269300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 261
Target Start/End: Complemental strand, 31802091 - 31801916
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||||| |||| | |||||||  ||||||||||| || ||||| | || ||||||||||| ||||||||  |||| | ||||| ||    
T  31802091 aggaaaggtgttacctttaatcacagccgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggagtgaaagtggaggaa 31801992  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcag 261  Q
    ||||||||| |||| ||||| |||||  |||||||| ||||| ||||    ||||||| |||| | |||||||||||||||    
T  31801991 gttttagcgagaagaagaagggtcaatgacgtttttgatgtt-ctga----aatgtgaagaagtaggtatgggtaatgcag 31801916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 265
Target Start/End: Complemental strand, 44158245 - 44158066
Alignment:
Q  83 gaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagt 182  Q
    |||||| ||||||||||| |||| | |||||||  ||||||||||| || ||||| | ||  |||||||||| ||||| |  ||||||||||||||||||    
T  44158245 gaaaggcgttacctttaatcacagccgaacacataaacttcaaaaaagtcagaatcgccggtgatgatgatgattttgaaagggtgagaatggagaaagt 44158146  T
Q  183 tttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||  | |||| |||  |||||| | |||||| ||||||||||   ||||||   |||||| |||||||||||||||||||    
T  44158145 tttagtagaaaggtgaaaggtcaaggatgtttttgatgtttctgactgaaatgt---gaaggaggtatgggtaatgcaggggc 44158066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 264
Target Start/End: Complemental strand, 27940982 - 27940889
Alignment:
Q  171 aatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcagggg 264  Q
    ||||||||| ||||||||||||||||||||||||||  | |||||| ||||||||||| ||||||||| |||||| | ||  ||||||||||||    
T  27940982 aatggagaacgttttagcgggaaggagaagagtcaatgatgtttttgatgtttctgagtaaaatgtgaagaaggaggaatatgtaatgcagggg 27940889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 265
Target Start/End: Original strand, 36895177 - 36895356
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||| ||||||||| |||| | ||||| |  ||||||||||  || ||||| |||| ||||||||||| |||||||| | ||| |||||||  |    
T  36895177 aggaaaggtgctacctttaatcacagccgaacaaacaaacttcaaaactgtcagaatcgtcggagatgatgatgattttggagggatgaaaatggaggta 36895276  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||| |||| |||||  ||||  |||||||| |||||     |  |||||||| |||||| |||||||||||||||||||    
T  36895277 gttttagcgagaagaagaaggatcaatgacgtttttgatgtt-----gtgaaatgtgaagaaggaggtatgggtaatgcaggggc 36895356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 33682889 - 33683006
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||| ||||||||||| ||||   |||||||  |||||||||||||| | ||| | || ||||||||||| ||||| || ||         |||||    
T  33682889 aggaaaggcgttacctttaatcacagtcgaacacagaaacttcaaaaacgtcataatcgccggagatgatgatgattttgaagggg---------agaaa 33682979  T
Q  181 gttttagcgggaaggagaagagtcaag 207  Q
    |||||||||||||||||||| ||||||    
T  33682980 gttttagcgggaaggagaagggtcaag 33683006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 81 - 265
Target Start/End: Complemental strand, 23954269 - 23954085
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcga-agatgatgatggttttggagaggtgagaatggagaa 179  Q
    |||||||||| |||||||||||||| | |||| ||  |||||||||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||    
T  23954269 aggaaaggtgctacctttaaccacagccgaactcagaaacttcaaaaacgtgagaatcg-cgagagatgatgatgattttggagaggtgagaatggagaa 23954171  T
Q  180 agttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||| || ||||||||||||||| ||||||||||||||| ||| | |||||||| |||||| ||||||||||| |||||||    
T  23954170 agttttagcaggtaggagaagagtcaaggacgttttttatgtttatgaaagaaatgtgaggaaggaggtatgggtaatacaggggc 23954085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 69 - 265
Target Start/End: Complemental strand, 40784822 - 40784626
Alignment:
Q  69 ttgataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtg 168  Q
    |||||||| || || ||| | |||||||||||||||||| |||||||| ||||||||| |||||||||| | | |||||| ||||| |||||||| ||||    
T  40784822 ttgataaactacagaaaatgcgttacctttaaccacaaccgaacacaaaaacttcaaacacgtgagaatcgccaaagatggtgatgattttggaggggtg 40784723  T
Q  169 agaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||||||||||||||||||||||||||| |||||  |  |||||||||||||| ||  |||||||| |||||| ||||| |||||||||||||    
T  40784722 agaatggagaaagttttagcgggaaggagaagggtcaatgatattttttatgtttctaagtgaaatgtgaagaaggaggtatgagtaatgcaggggc 40784626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 128 - 265
Target Start/End: Complemental strand, 2167890 - 2167753
Alignment:
Q  128 acgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctga 227  Q
    |||||||||| | || |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| ||||||||||    
T  2167890 acgtgagaatcgccggagatgaagatgattttggagaggtgagaatggagaaagttttagcgggaaggagaagggtcaaagacgtttttgatgtttctga 2167791  T
Q  228 gaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
       |||||||| |||||| ||||||||||| |||||||    
T  2167790 ttgaaatgtgaggaaggaggtatgggtaatacaggggc 2167753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 257
Target Start/End: Complemental strand, 27955841 - 27955657
Alignment:
Q  72 ataaattagaggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgaga 171  Q
    ||||||||||||||| ||||||||||| ||||||   |||||||||||||| |||||   ||| || |||| ||||||||||| ||||||||||||||||    
T  27955841 ataaattagaggaaatgtgttaccttttaccacagacgaacacaacaacttaaaaaattagaggatcgtcggagatgatgatgattttggagaggtgaga 27955742  T
Q  172 atggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaat 257  Q
    |||| ||| |||| ||||||||| ||||| |||||| |||||||| ||||||||||   ||| |||| |||||| |||||||||||    
T  27955741 atgg-gaaggtttaagcgggaagcagaagggtcaaggacgtttttaatgtttctgactgaaaagtgaggaaggaggtatgggtaat 27955657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 109 - 265
Target Start/End: Original strand, 46812271 - 46812427
Alignment:
Q  109 gaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaaga 208  Q
    |||||||  |||||||||||||| ||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||  ||||||     
T  46812271 gaacacagaaacttcaaaaacgtcagaatcgtcggagatgatgatgattttggaggggtgagaatggagaaagttttagtgggaaggagaaaggtcaagg 46812370  T
Q  209 acgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
     ||||||| ||||||||||   |||||||| ||| || ||||| |||||||||||||    
T  46812371 tcgtttttgatgtttctgactgaaatgtgaagaatgaggtatgagtaatgcaggggc 46812427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 118 - 265
Target Start/End: Original strand, 33038503 - 33038650
Alignment:
Q  118 aacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgtttttt 217  Q
    |||||||||||| ||||||| | || ||||||||||| |||||||| |||| |||||||||||||||||||||||||| |||| || ||  ||||||||     
T  33038503 aacttcaaaaacatgagaatcgccggagatgatgatgattttggaggggtgggaatggagaaagttttagcgggaaggggaagggttaatgacgtttttg 33038602  T
Q  218 atgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||||||  |||||||| |||||| |||||  ||||||||||||    
T  33038603 atgtttctgagtgaaatgtgaagaaggaggtatgtataatgcaggggc 33038650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 8423004 - 8423125
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||| |||||||| | ||| ||||||||| ||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||| ||||    
T  8423004 agatgatgatgattttggagggatgacaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgagtaaaatgtgaagaag 8423103  T
Q  244 gaagtatgggtaatgcaggggc 265  Q
    || | ||  |||||||||||||    
T  8423104 gaggaatatgtaatgcaggggc 8423125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 35344013 - 35344134
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||||||| ||| | |||||| ||||||||||| ||||||||| ||||    
T  35344013 agatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagttaaggatgtttttgatgtttctgagtaaaatgtgaagaag 35344112  T
Q  244 gaagtatgggtaatgcaggggc 265  Q
    || | ||  |||||||||||||    
T  35344113 gaggaatatgtaatgcaggggc 35344134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 38613865 - 38613744
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||  || ||||| |||||||||||  |||||||| |||     
T  38613865 agatgatgatgattttggagaggtgagaatagagaaagttttagcgggaaggagaagggtcaatgacatttttgatgtttctgagtgaaatgtgaggaat 38613766  T
Q  244 gaagtatgggtaatgcaggggc 265  Q
    || |||||| |||| |||||||    
T  38613765 gaggtatggataatacaggggc 38613744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 46996368 - 46996512
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||||| |||| | |||||||  ||||||||||| || ||||| |||| ||||||||||| |||||||| ||||| ||||||| ||    
T  46996368 aggaaaggtgttacctttaatcacagccgaacacacaaacttcaaaaatgtcagaatcgtcggagatgatgatgattttggaggggtgaaaatggaggaa 46996467  T
Q  181 gttttagcgggaaggagaaga---gtcaagaacgttttttatgtt 222  Q
    ||||||||| |||| ||||||   |||||| |||||||| |||||    
T  46996468 gttttagcgagaagaagaagaagggtcaaggacgtttttgatgtt 46996512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 265
Target Start/End: Original strand, 47341355 - 47341534
Alignment:
Q  83 gaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagt 182  Q
    |||||| ||||||||||| |||| | |||||||  ||| |||||||| | ||||| ||||  |||||||||   ||||||| |||||||||| |||||||    
T  47341355 gaaaggcgttacctttaatcacagccgaacacagaaacgtcaaaaacttcagaatcgtcggtgatgatgat---tttggaggggtgagaatgaagaaagt 47341451  T
Q  183 tttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||| |||| |||  |||||| | |||||| |||||||| |   |||||||| |||||| |||||||||||||||||||    
T  47341452 tttagcggaaaggtgaaatgtcaaggatgtttttgatgtttctcactgaaatgtgaagaaggaggtatgggtaatgcaggggc 47341534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 48704574 - 48704516
Alignment:
Q  141 cgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaa 199  Q
    |||||||||||||| ||||||||||| ||  |||| ||| |||||||||||||| ||||    
T  48704574 cgaagatgatgatgattttggagaggcgaagatggtgaaggttttagcgggaagtagaa 48704516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 6e-37; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 103 - 265
Target Start/End: Complemental strand, 27625232 - 27625070
Alignment:
Q  103 acaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagag 202  Q
    ||||| |||||||  |||||||||||||| |||||  ||| ||||||||||| |||||||| |||||||||||| |||||||||| |||||||||||| |    
T  27625232 acaaccgaacacagaaacttcaaaaacgtcagaatcatcggagatgatgatgattttggaggggtgagaatggataaagttttagtgggaaggagaaggg 27625133  T
Q  203 tcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||  ||||||||||| |||||||   |||| ||| |||||| |||||||||||||||||||    
T  27625132 tcaatgacgttttttatttttctgactgaaatctgaagaaggaggtatgggtaatgcaggggc 27625070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 264
Target Start/End: Original strand, 44558174 - 44558335
Alignment:
Q  103 acaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagag 202  Q
    ||||| |||||||  |||||||||||||| |||||  ||||||||||||||| |||||||| |||||||||||| | |||||||| |||||||||||| |    
T  44558174 acaaccgaacacagaaacttcaaaaacgtcagaatcatcgaagatgatgatgattttggaggggtgagaatggatagagttttagtgggaaggagaaggg 44558273  T
Q  203 tcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcagggg 264  Q
    ||||| |||||||| || |||||||   |||||| | |||||| ||||||||||||||||||    
T  44558274 tcaaggacgtttttgatttttctgactgaaatgtaaagaaggaggtatgggtaatgcagggg 44558335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 81 - 265
Target Start/End: Complemental strand, 2827862 - 2827683
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||||| |||||| |||||||  ||||||||||| || ||||| | || ||||||||||| |||||||| ||||| ||||||| ||    
T  2827862 aggaaaggtgttacctttaatcacaaccgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaa 2827763  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||| |||| ||||| |||||| |||||||| || ||||||    |||||||  |||||| |||||||||||||||||||    
T  2827762 gttttagcgagaagaagaagggtcaaggacgtttttgat-tttctg----aaatgtggagaaggaggtatgggtaatgcaggggc 2827683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 265
Target Start/End: Complemental strand, 35996527 - 35996343
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    ||||||||  |||||||| | |||||  ||||||   |||||||||||||| ||||| | || ||||||||||| |||||||| ||||||| ||||||||    
T  35996527 aggaaaggcattacctttgatcacaatcgaacacgggaacttcaaaaacgtcagaatcggcggagatgatgatgattttggaggggtgagactggagaaa 35996428  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||||||||||||||||||||  | |||||| ||||||||||   |||||||| |||||| | ||  |||||||||||||    
T  35996427 gttttagcgggaaggagaagagtcaaatatgtttttgatgtttctgactgaaatgtgaagaaggaggaatatgtaatgcaggggc 35996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 257
Target Start/End: Complemental strand, 4519769 - 4519656
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||| |||||||||||  |||||||| ||||    
T  4519769 agatgatgatgattttggagaggtgagaatggagaaagttttagcgggaagaagaagggtcaaggatgtttttgatgtttctgagtgaaatgtgaggaag 4519670  T
Q  244 gaagtatgggtaat 257  Q
    || ||||| |||||    
T  4519669 gaggtatgagtaat 4519656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 265
Target Start/End: Original strand, 10372339 - 10372520
Alignment:
Q  84 aaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagtt 183  Q
    ||||||||||||||| | ||||   |||||||  ||||||||||| |  ||||| |  | ||||||||||| |||||||| ||||| ||||||||| |||    
T  10372339 aaaggtgttacctttgatcacagtcgaacacaggaacttcaaaaatgccagaatcgatggagatgatgatgattttggaggggtgacaatggagaatgtt 10372438  T
Q  184 ttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    |||||||||||||||||||||||| | |||||| |||||||| || ||||||||| |||||| | ||  |||||||||||||    
T  10372439 ttagcgggaaggagaagagtcaaggatgtttttgatgtttctaagtaaaatgtgaagaaggaggaatatgtaatgcaggggc 10372520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 109 - 265
Target Start/End: Original strand, 2350199 - 2350355
Alignment:
Q  109 gaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaaga 208  Q
    |||||||  |||||||||||||| ||||| | || ||||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||     
T  2350199 gaacacaggaacttcaaaaacgtcagaatcgccggagatgattatgattttggaggggtgagaatggagaaagttttagtgggaaggagaagagtcaagg 2350298  T
Q  209 acgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    | |||||| |||||||| |   |||||||| |||||| | ||  |||||||||||||    
T  2350299 atgtttttgatgtttctaactgaaatgtgaagaaggaggaatatgtaatgcaggggc 2350355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 81 - 265
Target Start/End: Complemental strand, 10763045 - 10762861
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||| | |||    |||||||  ||||||||| |||  ||||| |  | ||||||||||| |||||||| ||||| |||||||||     
T  10763045 aggaaaggtgttacctttgatcacggtcgaacacaggaacttcaaacacgccagaatcgatggagatgatgatgattttggaggggtgacaatggagaac 10762946  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||| |||| | | ||  |||||||||||||    
T  10762945 gttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgagtaaaatgtgaagaagaaggaatatgtaatgcaggggc 10762861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 44794483 - 44794604
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    |||| |||||| |||||||| ||||| ||||||||| ||||||||||||||||||||||||||  | |||||| ||||||||||| ||||||||| ||||    
T  44794483 agattatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaaagatgtttttaatgtttctgagtaaaatgtgaagaag 44794582  T
Q  244 gaagtatgggtaatgcaggggc 265  Q
    || | ||  |||||||||||||    
T  44794583 gaggaatatgtaatgcaggggc 44794604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 133 - 265
Target Start/End: Original strand, 51041645 - 51041777
Alignment:
Q  133 agaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagc-gggaaggagaagagtcaagaacgttttttatgtttctgagaaa 231  Q
    ||||| |||| ||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||| |||||  |||||||| |||||||||||  |    
T  51041645 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaaagctttagcggggaaggagaagggtcaatgacgtttttgatgtttctgagtga 51041744  T
Q  232 aatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||| ||| |  |||||||||||||||||||    
T  51041745 aatgtgaagaaag-ggtatgggtaatgcaggggc 51041777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 25993905 - 25993847
Alignment:
Q  141 cgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaa 199  Q
    |||||||||||||| ||||||||||||||  |||| ||| ||||| |||||||||||||    
T  25993905 cgaagatgatgatgattttggagaggtgaagatggtgaaggttttggcgggaaggagaa 25993847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 9e-30; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 29077792 - 29077630
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||| | |||    |||||||  ||||||||| |||  ||||| |  | ||||||||||| |||||||| ||||| |||||||||     
T  29077792 aggaaaggtgttacctttgatcacggtcgaacacaggaacttcaaacacgccagaatcgatggagatgatgatgattttggaggggtgaaaatggagaac 29077693  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||| ||||    
T  29077692 gttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgagtaaaatgtgaagaag 29077630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 265
Target Start/End: Complemental strand, 29112764 - 29112580
Alignment:
Q  81 aggaaaggtgttacctttaaccacaacggaacacaacaacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaa 180  Q
    |||||||||||||||||| | |||    |||||||  ||||||||| |||  ||||| |  | ||||||||||| |||||||| ||||| |||||||||     
T  29112764 aggaaaggtgttacctttgatcacggtcgaacacaggaacttcaaacacgccagaatcgatggagatgatgatgattttggaggggtgacaatggagaac 29112665  T
Q  181 gttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaaggaagtatgggtaatgcaggggc 265  Q
    ||||||||||||||||||||||||||| | |||||| |||||||| || ||||||||| |||| | | ||  |||||||||||||    
T  29112664 gttttagcgggaaggagaagagtcaaggatgtttttgatgtttctaagtaaaatgtgaagaagaaggaatatgtaatgcaggggc 29112580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 2968526 - 2968405
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||||||||||  | |||||| || |||||||| ||||||||| ||||    
T  2968526 agatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaatgatgtttttgatttttctgagtaaaatgtgaagaag 2968427  T
Q  244 gaagtatgggtaatgcaggggc 265  Q
    || | ||  |||||||||||||    
T  2968426 gatgaatatgtaatgcaggggc 2968405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 264
Target Start/End: Complemental strand, 4641756 - 4641636
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagaaaaatgtgacgaag 243  Q
    ||||||||||| |||||||| || || ||||||||| ||||||||||||||||||||||||||  | |||||| ||||||||||| ||||||||| ||||    
T  4641756 agatgatgatgattttggaggggcgacaatggagaacgttttagcgggaaggagaagagtcaaagatgtttttgatgtttctgagtaaaatgtgaagaag 4641657  T
Q  244 gaagtatgggtaatgcagggg 264  Q
    || | ||  ||||||||||||    
T  4641656 gaggaatatgtaatgcagggg 4641636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 30641033 - 30641137
Alignment:
Q  118 aacttcaaaaacgtgagaattgtcgaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgtttttt 217  Q
    |||||||||||||| |||||  ||  ||||||||||| |||||||| || ||||| |||  ||||||||| |||||||||||| |||||| ||||||||     
T  30641033 aacttcaaaaacgtcagaatc-tcagagatgatgatgattttggaggggcgagaacgga--aagttttagtgggaaggagaagggtcaaggacgtttttg 30641129  T
Q  218 atgtttct 225  Q
    ||||||||    
T  30641130 atgtttct 30641137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 4314597 - 4314660
Alignment:
Q  142 gaagatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtca 205  Q
    ||||||||||||| |||||||||  |||  || | ||| |||||||||||||||||||||||||    
T  4314597 gaagatgatgatgattttggagaaatgaagattgtgaaggttttagcgggaaggagaagagtca 4314660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 25171831 - 25171903
Alignment:
Q  144 agatgatgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttt 216  Q
    ||||||| ||| ||||||||||||||  |||  ||| |||||||||||||||||||  |||| | ||||||||    
T  25171831 agatgataatgattttggagaggtgaagatgatgaaggttttagcgggaaggagaaaggtcagggacgttttt 25171903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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