View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11008_low_55 (Length: 241)

Name: NF11008_low_55
Description: NF11008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11008_low_55
NF11008_low_55
[»] chr6 (18 HSPs)
chr6 (93-238)||(5600995-5601141)
chr6 (18-87)||(10642813-10642882)
chr6 (93-235)||(10642641-10642782)
chr6 (21-87)||(5600896-5600964)
chr6 (93-171)||(24192503-24192580)
chr6 (98-171)||(24191411-24191483)
chr6 (93-169)||(12183023-12183099)
chr6 (30-93)||(22713792-22713855)
chr6 (101-171)||(3901907-3901977)
chr6 (93-171)||(19478143-19478220)
chr6 (93-171)||(21396694-21396771)
chr6 (172-235)||(6113101-6113165)
chr6 (92-171)||(29325530-29325609)
chr6 (93-171)||(17281586-17281664)
chr6 (93-171)||(21401750-21401827)
chr6 (93-171)||(22698266-22698343)
chr6 (93-171)||(29491260-29491337)
chr6 (93-171)||(31981555-31981632)
[»] chr4 (39 HSPs)
chr4 (93-229)||(39319569-39319704)
chr4 (30-98)||(34644650-34644718)
chr4 (93-186)||(34644536-34644630)
chr4 (18-98)||(17359624-17359704)
chr4 (23-85)||(41816889-41816951)
chr4 (35-83)||(19724948-19724996)
chr4 (92-229)||(17359472-17359605)
chr4 (93-171)||(10318802-10318880)
chr4 (93-171)||(13695154-13695231)
chr4 (93-171)||(24490026-24490104)
chr4 (93-171)||(8980308-8980385)
chr4 (93-171)||(8985428-8985505)
chr4 (93-171)||(13700505-13700582)
chr4 (93-171)||(21299856-21299933)
chr4 (93-171)||(21304976-21305053)
chr4 (93-171)||(41393240-41393317)
chr4 (93-171)||(47046330-47046407)
chr4 (93-171)||(51019396-51019473)
chr4 (93-171)||(54991481-54991558)
chr4 (33-98)||(3997995-3998060)
chr4 (45-98)||(30255530-30255583)
chr4 (30-98)||(3258206-3258274)
chr4 (93-169)||(3998079-3998155)
chr4 (30-82)||(29236355-29236407)
chr4 (95-171)||(34560492-34560568)
chr4 (93-171)||(653038-653115)
chr4 (93-171)||(36354171-36354248)
chr4 (93-171)||(36359289-36359366)
chr4 (93-171)||(39999064-39999141)
chr4 (93-171)||(40004022-40004099)
chr4 (93-171)||(53797624-53797701)
chr4 (93-171)||(54348352-54348429)
chr4 (130-167)||(2819842-2819879)
chr4 (30-75)||(29085813-29085858)
chr4 (23-80)||(31298316-31298373)
chr4 (23-87)||(7903034-7903098)
chr4 (93-165)||(9764044-9764115)
chr4 (93-169)||(10120832-10120907)
chr4 (137-169)||(37259944-37259976)
[»] chr5 (29 HSPs)
chr5 (100-232)||(1430013-1430146)
chr5 (149-232)||(36949044-36949128)
chr5 (93-193)||(28857833-28857935)
chr5 (23-87)||(1429922-1429986)
chr5 (18-98)||(36949190-36949270)
chr5 (93-171)||(24771380-24771457)
chr5 (94-215)||(31986676-31986798)
chr5 (18-87)||(31986830-31986899)
chr5 (30-80)||(28857973-28858023)
chr5 (93-176)||(41853538-41853620)
chr5 (93-171)||(17504948-17505025)
chr5 (93-171)||(17510053-17510130)
chr5 (93-171)||(21323988-21324066)
chr5 (93-171)||(36253821-36253898)
chr5 (93-171)||(42019568-42019645)
chr5 (121-182)||(25689343-25689404)
chr5 (23-87)||(21323894-21323958)
chr5 (23-87)||(31731646-31731710)
chr5 (93-171)||(26709097-26709176)
chr5 (93-171)||(26978831-26978910)
chr5 (93-171)||(7805066-7805143)
chr5 (93-171)||(13582713-13582790)
chr5 (93-171)||(14374130-14374207)
chr5 (93-171)||(24435892-24435969)
chr5 (93-182)||(24776838-24776927)
chr5 (137-171)||(31731538-31731572)
chr5 (93-166)||(1414074-1414146)
chr5 (137-169)||(13301552-13301584)
chr5 (93-169)||(37248818-37248894)
[»] chr3 (34 HSPs)
chr3 (18-87)||(795328-795397)
chr3 (93-232)||(795428-795569)
chr3 (18-87)||(1688809-1688878)
chr3 (18-87)||(1741031-1741101)
chr3 (94-213)||(1688910-1689029)
chr3 (93-229)||(2617279-2617414)
chr3 (31-87)||(1689896-1689952)
chr3 (137-232)||(53358175-53358271)
chr3 (28-87)||(25023857-25023916)
chr3 (92-193)||(27605157-27605259)
chr3 (30-87)||(26706890-26706947)
chr3 (30-87)||(27605070-27605127)
chr3 (93-171)||(54270639-54270716)
chr3 (41-85)||(23071488-23071532)
chr3 (18-84)||(2617178-2617245)
chr3 (93-171)||(3476969-3477046)
chr3 (93-182)||(4117623-4117712)
chr3 (93-171)||(10586205-10586283)
chr3 (93-166)||(17357836-17357910)
chr3 (93-171)||(17368714-17368791)
chr3 (93-167)||(21494325-21494399)
chr3 (37-87)||(23074352-23074402)
chr3 (93-171)||(33089366-33089443)
chr3 (93-171)||(17364058-17364137)
chr3 (32-87)||(31002799-31002854)
chr3 (93-171)||(20090685-20090762)
chr3 (93-171)||(20095810-20095887)
chr3 (93-171)||(20810367-20810444)
chr3 (93-171)||(34129192-34129269)
chr3 (93-171)||(53119522-53119599)
chr3 (93-166)||(3482446-3482518)
chr3 (120-169)||(49971474-49971523)
chr3 (93-166)||(55128790-55128862)
chr3 (23-87)||(10586111-10586175)
[»] chr2 (26 HSPs)
chr2 (92-230)||(11658910-11659048)
chr2 (92-171)||(19538380-19538459)
chr2 (18-86)||(28945273-28945341)
chr2 (31-83)||(39543009-39543061)
chr2 (106-210)||(22844773-22844878)
chr2 (18-87)||(27556667-27556736)
chr2 (171-239)||(19538285-19538353)
chr2 (18-87)||(11658812-11658880)
chr2 (30-87)||(39542440-39542497)
chr2 (31-87)||(28855108-28855164)
chr2 (93-171)||(42914637-42914714)
chr2 (92-171)||(28854999-28855078)
chr2 (93-171)||(6297908-6297986)
chr2 (121-185)||(29907415-29907480)
chr2 (23-87)||(19538488-19538552)
chr2 (32-87)||(6297823-6297878)
chr2 (93-167)||(5089277-5089350)
chr2 (171-232)||(6298013-6298075)
chr2 (174-232)||(28854866-28854924)
chr2 (93-171)||(42723474-42723551)
chr2 (93-171)||(42728643-42728720)
chr2 (93-171)||(44096297-44096374)
chr2 (93-171)||(44754619-44754696)
chr2 (93-171)||(44759785-44759862)
chr2 (122-171)||(40518523-40518572)
chr2 (204-232)||(27556599-27556627)
[»] scaffold0027 (2 HSPs)
scaffold0027 (149-232)||(43031-43115)
scaffold0027 (18-80)||(43214-43276)
[»] chr7 (26 HSPs)
chr7 (16-91)||(7875015-7875090)
chr7 (23-98)||(19640390-19640465)
chr7 (161-232)||(19640186-19640258)
chr7 (93-176)||(12934387-12934469)
chr7 (93-171)||(9973457-9973534)
chr7 (93-171)||(16539435-16539512)
chr7 (93-171)||(16626150-16626227)
chr7 (171-232)||(27256148-27256210)
chr7 (93-171)||(27256237-27256315)
chr7 (171-232)||(40865480-40865542)
chr7 (93-171)||(42571940-42572017)
chr7 (93-171)||(47177142-47177219)
chr7 (30-87)||(19687145-19687202)
chr7 (98-171)||(22857715-22857787)
chr7 (30-82)||(20932648-20932700)
chr7 (93-171)||(21081062-21081141)
chr7 (93-164)||(33226416-33226486)
chr7 (30-80)||(24169972-24170022)
chr7 (93-171)||(32212677-32212754)
chr7 (93-171)||(33237997-33238074)
chr7 (93-171)||(47998970-47999047)
chr7 (137-217)||(7875164-7875245)
chr7 (93-166)||(17495403-17495475)
chr7 (93-166)||(17557739-17557811)
chr7 (97-169)||(19640295-19640367)
chr7 (23-87)||(27256345-27256409)
[»] chr1 (23 HSPs)
chr1 (94-171)||(8267853-8267931)
chr1 (18-98)||(14724341-14724421)
chr1 (16-81)||(13893737-13893802)
chr1 (93-232)||(14724182-14724320)
chr1 (23-87)||(33055141-33055205)
chr1 (23-98)||(8267758-8267833)
chr1 (93-183)||(25188295-25188386)
chr1 (93-171)||(10106098-10106175)
chr1 (93-171)||(11251136-11251213)
chr1 (93-171)||(27716438-27716515)
chr1 (93-171)||(37404439-37404516)
chr1 (93-171)||(37409560-37409637)
chr1 (93-171)||(38734270-38734347)
chr1 (93-171)||(41097974-41098052)
chr1 (188-232)||(13893655-13893699)
chr1 (171-232)||(8267958-8268020)
chr1 (93-171)||(11387853-11387930)
chr1 (93-171)||(13890808-13890885)
chr1 (93-171)||(26651189-26651266)
chr1 (93-171)||(36684738-36684815)
chr1 (93-166)||(5724979-5725051)
chr1 (18-98)||(25188197-25188275)
chr1 (23-87)||(41097880-41097944)
[»] chr8 (16 HSPs)
chr8 (93-186)||(33847998-33848091)
chr8 (23-98)||(34818627-34818702)
chr8 (94-170)||(34818722-34818798)
chr8 (93-171)||(19430009-19430086)
chr8 (93-171)||(19435511-19435588)
chr8 (93-171)||(19566158-19566235)
chr8 (93-171)||(19571660-19571737)
chr8 (171-232)||(25368119-25368181)
chr8 (93-171)||(31030523-31030600)
chr8 (93-173)||(25368015-25368095)
chr8 (93-171)||(21644104-21644181)
chr8 (93-167)||(33616750-33616823)
chr8 (171-232)||(37771617-37771679)
chr8 (93-171)||(42514397-42514474)
chr8 (137-170)||(37771707-37771740)
chr8 (23-87)||(25367908-25367972)
[»] scaffold0517 (1 HSPs)
scaffold0517 (93-171)||(3558-3635)
[»] scaffold0166 (2 HSPs)
scaffold0166 (93-171)||(13763-13840)
scaffold0166 (93-182)||(19221-19310)
[»] scaffold0070 (1 HSPs)
scaffold0070 (171-232)||(62942-63004)
[»] scaffold0067 (1 HSPs)
scaffold0067 (93-171)||(33991-34069)
[»] scaffold0014 (1 HSPs)
scaffold0014 (93-171)||(31540-31617)
[»] scaffold0020 (2 HSPs)
scaffold0020 (93-170)||(1248-1325)
scaffold0020 (23-87)||(1154-1218)
[»] scaffold0061 (1 HSPs)
scaffold0061 (23-87)||(45887-45951)
[»] scaffold0017 (1 HSPs)
scaffold0017 (23-87)||(152836-152900)
[»] scaffold0594 (1 HSPs)
scaffold0594 (93-171)||(9231-9308)
[»] scaffold0132 (2 HSPs)
scaffold0132 (93-171)||(2795-2872)
scaffold0132 (93-171)||(10755-10832)
[»] scaffold0055 (1 HSPs)
scaffold0055 (93-171)||(3053-3130)
[»] scaffold0052 (1 HSPs)
scaffold0052 (93-171)||(81405-81482)
[»] scaffold0011 (2 HSPs)
scaffold0011 (93-171)||(1560-1637)
scaffold0011 (93-171)||(7041-7118)
[»] scaffold0060 (3 HSPs)
scaffold0060 (93-166)||(37010-37082)
scaffold0060 (23-84)||(47785-47846)
scaffold0060 (23-83)||(52828-52888)
[»] scaffold0041 (1 HSPs)
scaffold0041 (23-87)||(35584-35648)


Alignment Details
Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 5600995 - 5601141
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg-taatatcttcggtggagatt 191  Q
    ||||||| |||||||| || |||||| | |||||||||||||  ||||||||||| ||||||||||||||||||||| | ||||||| | | ||| ||||    
T  5600995 gttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactcaacctgataatatccttgatggtgatt 5601094  T
Q  192 tcgattttgttaaaaggtacttttctgaactcgaaaaacaatatgga 238  Q
    ||||||||||||||||||||||||||||||| |||||| || |||||    
T  5601095 tcgattttgttaaaaggtacttttctgaacttgaaaaataacatgga 5601141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 10642882 - 10642813
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  10642882 attaaaccatatttgagggtgttatttctggaacgattacttacggtgcagtacgtaatcgaacaagtga 10642813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 10642782 - 10642641
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcggtggagatt 191  Q
    ||||||||||||||||||| || ||| ||||||| | |||||  ||||||||||| |||| | ||||||||||||||| |||||||||||| |||   ||    
T  10642782 gttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcgacattgtcgtgactcaacccggtaatatcttcgatggtagtt 10642683  T
Q  192 tcgattttgttaaaaggtacttttctgaactcgaaaaacaatat 235  Q
    | || ||  || |||||||||||||| |||||||||||||||||    
T  10642682 ttgaatt--tttaaaggtacttttctaaactcgaaaaacaatat 10642641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 5600896 - 5600964
Alignment:
Q  21 aaaccatttttgagggtgttatttctcgaacgattacttatggt--gcagtacgtaatcgaacaggtga 87  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||  |||||||||||||||||| ||||    
T  5600896 aaaccatatttgagggtgttatttctcgaacgattagttacggtgcgcagtacgtaatcgaacatgtga 5600964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 24192503 - 24192580
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || ||||| ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  24192503 gttgctagtctaccttgcacaa-ctcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 24192580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 24191411 - 24191483
Alignment:
Q  98 tagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||||||||||||| || ||||| ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  24191411 tagtctaccttgcacaa-ctcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 24191483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 12183023 - 12183099
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacc 169  Q
    ||||||||||||| ||||| |||||  | ||||| |||||||  ||||||||| | |||||||||||||||||||||    
T  12183023 gttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 12183099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 22713855 - 22713792
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgag 93  Q
    |||||| |||||||| ||||||||||||||| |||||| |||||||| ||||| |||| |||||    
T  22713855 ttgaggatgttatttttcgaacgattacttacggtgcaatacgtaattgaacaagtgaactgag 22713792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 3901977 - 3901907
Alignment:
Q  101 tctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||| |||||  ||||||| ||| |||  ||||||||| | |||||||||||||||||||||||    
T  3901977 tctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccg 3901907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 19478220 - 19478143
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  19478220 gttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccg 19478143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 21396771 - 21396694
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  21396771 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 21396694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 6113101 - 6113165
Alignment:
Q  172 taatatcttcggtggagatttcgattttgttaaaa-ggtacttttctgaactcgaaaaacaatat 235  Q
    ||||||||||||||  |||||||||||| | |||| ||||| ||||||||| |||||||||||||    
T  6113101 taatatcttcggtgatgatttcgattttatcaaaaaggtacgtttctgaacccgaaaaacaatat 6113165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 29325609 - 29325530
Alignment:
Q  92 agttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||||||||||||||||||| ||||| || ||||||||  |||  ||||||| | | |||| || |||||||||||||||    
T  29325609 agttgttagtctaccttgcacaaacttaggtagtgtcgtaaaacgtcttaaaaagagcgacttgatcgtgactcaacccg 29325530  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 17281586 - 17281664
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||||||||||||||| || |||  | | ||||| |||||||  ||||||||||| |||| || |||||||||||||||    
T  17281586 gttgttagtctaccttacacaaatacgggtagtgccgcgaaacgtcttaaagaaagcgacatgctcgtgactcaacccg 17281664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 21401827 - 21401750
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| ||||||||||| || || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  21401827 gttgctagtctaccttccacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcatcccg 21401750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 22698266 - 22698343
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  22698266 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 22698343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 29491260 - 29491337
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||| ||||||||||||| ||||    
T  29491260 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacttggtcgtgactcaccccg 29491337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 31981632 - 31981555
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  | || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  31981632 gttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 31981555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 93 - 229
Target Start/End: Complemental strand, 39319704 - 39319569
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcggtggagatt 191  Q
    ||||||||||||||||||| ||||||   |||||||| ||||  ||||||||||| ||||||| |||||||||||||| ||||| ||||||  || ||||    
T  39319704 gttgttagtctaccttgcacaaactcgagtagtgtcgtgaaacgtcttaaagaaagcgacctgatcgtgactcaacccggtaatctcttcg--ggcgatt 39319607  T
Q  192 tcgattttgttaaaaggtacttttctgaactcgaaaaa 229  Q
    |||||||| |||||||||||||||||||||||||||||    
T  39319606 tcgattttattaaaaggtacttttctgaactcgaaaaa 39319569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 34644718 - 34644650
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgagttgtt 98  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||    
T  34644718 ttgagggtgttatttctcgaacggttacttacggtgcagtacgtaatcgaacaggtgagctgagctgtt 34644650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 186
Target Start/End: Complemental strand, 34644630 - 34644536
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcggtgg 186  Q
    ||||||||| |||||| || |||||| |||||||||||||||  ||||||||||| |||| || |||||||||||||| ||||||||||||||||    
T  34644630 gttgttagtttaccttacacaaactcggatagtgtcgcgaaacgtcttaaagaaagcgacatgatcgtgactcaacccggtaatatcttcggtgg 34644536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 17359704 - 17359624
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgagttgtt 98  Q
    |||||||||| ||||| |||||| ||||||||| |||||| || |||||| ||||||||||||||||||| ||| ||||||    
T  17359704 attaaaccatatttgaaggtgttgtttctcgaatgattacatacggtgcaatacgtaatcgaacaggtgaactgggttgtt 17359624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 41816951 - 41816889
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggt 85  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||||  |||||||||||||    
T  41816951 accatattagagggtgttatttctcgaacgattatttatggtgcagtatctaatcgaacaggt 41816889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 19724996 - 19724948
Alignment:
Q  35 ggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacag 83  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  19724996 ggtgttatttctcgaacgattacatacggtgcagtacgtaatcgaacag 19724948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 229
Target Start/End: Complemental strand, 17359605 - 17359472
Alignment:
Q  92 agttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcggtggagat 190  Q
    |||||||||||||||||| | |||||| | ||||| || ||||  ||||||||||| |||     |||||||||||||| |||||||||||  ||| | |    
T  17359605 agttgttagtctaccttgaacaaactcgggtagtgccgggaaacgtcttaaagaaagcga-----tcgtgactcaacccggtaatatcttc-atggtgtt 17359512  T
Q  191 ttcgattttgttaa-aaggtacttttctgaactcgaaaaa 229  Q
    |||||||||||||| || ||||||||||||||| ||||||    
T  17359511 ttcgattttgttaagaatgtacttttctgaacttgaaaaa 17359472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 10318802 - 10318880
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| |||||  ||||   ||||||||| ||||||||| | |||| ||||||||||||||||||    
T  10318802 gttgttagtctaccttgcacaaacttggatacgatcgcgaaatgtcttaaagagagcgacatggtcgtgactcaacccg 10318880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 13695231 - 13695154
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| ||||||| |||||||||||| |||||||||||||||||| ||||    
T  13695231 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactcaccccg 13695154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 24490104 - 24490026
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| |||||    |||||||||||||  ||||||||| | ||| |||||||||||||||||||    
T  24490104 gttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgactcaacccg 24490026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 8980308 - 8980385
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  8980308 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 8980385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 8985428 - 8985505
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  8985428 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 8985505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 13700582 - 13700505
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  13700582 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 13700505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 21299856 - 21299933
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  21299856 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 21299933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 21304976 - 21305053
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  21304976 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaaagtcttaaagaaagcgacctggtcgtgactcaccccg 21305053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 41393317 - 41393240
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  41393317 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 41393240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 47046330 - 47046407
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  47046330 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactcaccccg 47046407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 51019396 - 51019473
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  51019396 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 51019473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 54991558 - 54991481
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  54991558 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 54991481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 3997995 - 3998060
Alignment:
Q  33 agggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgagttgtt 98  Q
    |||||||||||||||||||||| |  || |||||||||  ||||||||||||||| ||| ||||||    
T  3997995 agggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgggttgtt 3998060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 30255530 - 30255583
Alignment:
Q  45 ctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgagttgtt 98  Q
    |||||||||||||||| |||||||||| ||||||||| ||||| ||| ||||||    
T  30255530 ctcgaacgattacttacggtgcagtacttaatcgaactggtgaactgtgttgtt 30255583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 3258274 - 3258206
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgagttgtt 98  Q
    |||| ||||||||||||||||| |||||||| |||  | ||| |||||| |||||||| ||||||||||    
T  3258274 ttgatggtgttatttctcgaacaattacttacggtataatacataatcgtacaggtgaactgagttgtt 3258206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 3998079 - 3998155
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacc 169  Q
    ||||||||||||| ||||| ||  || | ||||| || ||  ||||||||||||| |||||||||||||||||||||    
T  3998079 gttgttagtctactttgcacaatttcgggtagtgccgtgatttatcttaaagaaagcgacctggtcgtgactcaacc 3998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 29236407 - 29236355
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaaca 82  Q
    |||| |||||||||| ||||||||||||||| ||| || ||||||||||||||    
T  29236407 ttgaaggtgttatttttcgaacgattacttacggtacaatacgtaatcgaaca 29236355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 34560568 - 34560492
Alignment:
Q  95 tgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||| ||  || | ||||| || ||  | ||||||||||| |||||||||||||||||||||||    
T  34560568 tgttagtctaccttgcataatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacccg 34560492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 653115 - 653038
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| ||| |  | ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  653115 gttgttagtctaccttgcacaaattggg-tagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 653038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 36354248 - 36354171
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  36354248 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 36354171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 36359366 - 36359289
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  36359366 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 36359289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 39999141 - 39999064
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  39999141 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 39999064  T

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Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 40004099 - 40004022
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  40004099 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 40004022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 53797701 - 53797624
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  | || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  53797701 gttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 53797624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 54348429 - 54348352
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  54348429 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 54348352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 2819879 - 2819842
Alignment:
Q  130 cgaaatatcttaaagaaatcgacctggtcgtgactcaa 167  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  2819879 cgaaacatcttaaagaaaacgacctggtcgtgactcaa 2819842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 29085858 - 29085813
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaa 75  Q
    |||||| ||||||||||| |||||||||||| |||| |||||||||    
T  29085858 ttgaggatgttatttctcaaacgattacttacggtgaagtacgtaa 29085813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 31298316 - 31298373
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaa 80  Q
    ||||| ||||| |||||||||||||||||||||| ||| |||||  ||| ||||||||    
T  31298316 accatatttgatggtgttatttctcgaacgattatttacggtgcgatacttaatcgaa 31298373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 7903034 - 7903098
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| || ||| ||||||||||||||||||| |  || |||||||||  |||||||||||||||    
T  7903034 accatattagagagtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtga 7903098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 9764044 - 9764115
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactc 165  Q
    ||||||||||||||||||| || || || ||||| | ||||| ||||||||| |  |||||||||||||||||    
T  9764044 gttgttagtctaccttgcacaa-cttaggtagtgccacgaaacatcttaaagtaggcgacctggtcgtgactc 9764115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 10120832 - 10120907
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacc 169  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | ||||||| |||||||||||||    
T  10120832 gttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacc 10120907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 37259944 - 37259976
Alignment:
Q  137 tcttaaagaaatcgacctggtcgtgactcaacc 169  Q
    ||||||||||| |||||||||||||||||||||    
T  37259944 tcttaaagaaagcgacctggtcgtgactcaacc 37259976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 1430013 - 1430146
Alignment:
Q  100 gtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcggtggagatttcgattt 198  Q
    |||||||||||| |||||| |||| ||||| ||||  ||||||||||| |||| | ||||| ||||||||  ||||||||||| |||| |||||||||||    
T  1430013 gtctaccttgcacaaactcggatattgtcgtgaaacgtcttaaagaaaacgacatagtcgtaactcaaccaagtaatatcttcagtggtgatttcgattt 1430112  T
Q  199 tgttaaaaggtacttttctgaactcgaaaaacaa 232  Q
    | ||||||| || |||||||||||||||||||||    
T  1430113 tattaaaagctatttttctgaactcgaaaaacaa 1430146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 36949128 - 36949044
Alignment:
Q  149 cgacctggtcgtgactcaacccg-taatatcttcggtggagatttcgattttgttaaaaggtacttttctgaactcgaaaaacaa 232  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| |||||| ||||||||||||||| |||||||||    
T  36949128 cgacctggtcgtgactcaatccgataatatcttcggtggtgatttcgattttattaaaaagtacttttctgaacttgaaaaacaa 36949044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 28857935 - 28857833
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatctt-aaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcggtggagat 190  Q
    |||||| |||||||||||| |||||||| ||||| |||||||  |||| ||||||| |||| ||||||||||||||||| ||||||||||||| || |||    
T  28857935 gttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaacccggtaatatcttcggaggtgat 28857836  T
Q  191 ttc 193  Q
    |||    
T  28857835 ttc 28857833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 1429922 - 1429986
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||| ||||    
T  1429922 accatatttgagggtgttatttctcgaatgattatttatggtgcattacgtaatcgaacatgtga 1429986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 36949270 - 36949190
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgagttgtt 98  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||| || ||||||| ||||| ||||  |||||||||    
T  36949270 attaaaccatatttgagggtgttatttctcgaacgattatttacggtgtagcacgtaattgaacatgtgaattgagttgtt 36949190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 24771380 - 24771457
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || || || ||||| ||||||| |||||||||||| |||||||||||||||||| ||||    
T  24771380 gttgttagtctaccttgcacaa-cttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactcatcccg 24771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 31986798 - 31986676
Alignment:
Q  94 ttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg-taatatcttcggtggagattt 192  Q
    |||||| ||||||||||| |||||| | |||||||||||||  ||||||||||| ||||||  ||||||||||||||| |||||| |||   || |||||    
T  31986798 ttgttaatctaccttgcataaactcgggtagtgtcgcgaaacgtcttaaagaaagcgaccttatcgtgactcaacccgataatattttcaacggtgattt 31986699  T
Q  193 cgattttgttaaaaggtactttt 215  Q
    || | || | |||||||||||||    
T  31986698 cgctattttaaaaaggtactttt 31986676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 31986899 - 31986830
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    |||||||||| |  |||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  31986899 attaaaccatatcagaggatgttatttctcgatcgattacttacggtgcagtacgtaatcgaacaagtga 31986830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 28858023 - 28857973
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaa 80  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  28858023 ttgagggtgttatttctcgaatgattacttatgttgcagtgcgtaatcgaa 28857973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 41853620 - 41853538
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccgtaata 176  Q
    |||| |||||||| ||||| || || || |||||||||||||  ||||||||||| |||||||||||||||||| || ||||||    
T  41853620 gttgctagtctactttgcacaa-cttaggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactcacccggtaata 41853538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 17505025 - 17504948
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  17505025 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactcaccccg 17504948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 17510130 - 17510053
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  17510130 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 17510053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 21323988 - 21324066
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| ||  || ||||||| || ||  | ||||||||||| |||||||||| ||||||||||||    
T  21323988 gttgttagtctaccttgcacaatttcggatagtgccgtgatttgtcttaaagaaagcgacctggtcatgactcaacccg 21324066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 36253898 - 36253821
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  36253898 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 36253821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 42019645 - 42019568
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  42019645 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 42019568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 25689343 - 25689404
Alignment:
Q  121 atagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccgtaatatcttcg 182  Q
    |||||| ||||||| |||||||||||| |||  |||||||||||||||| ||||| ||||||    
T  25689343 atagtgccgcgaaacatcttaaagaaaacgatatggtcgtgactcaacctgtaatctcttcg 25689404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 21323894 - 21323958
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| || ||||||||||||||||||||||| |  || |||||||||  |||||||||||||||    
T  21323894 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtga 21323958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 31731710 - 31731646
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| || ||||||||||||||||||||||| |  || |||||||||  |||||||||||||||    
T  31731710 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtga 31731646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 26709176 - 26709097
Alignment:
Q  93 gttgttagtctaccttgcaaa-aactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| | || | || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  26709176 gttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 26709097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 26978910 - 26978831
Alignment:
Q  93 gttgttagtctaccttgcaaa-aactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| | || | || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  26978910 gttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 26978831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 7805143 - 7805066
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| |  ||||||||||||||||||||||    
T  7805143 gttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagggacctggtcgtgactcaacccg 7805066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 13582713 - 13582790
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| ||| |  | ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  13582713 gttgttagtctaccttgcacaaattggg-tagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 13582790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 14374207 - 14374130
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||||||||||||| |||| || ||  | ||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  14374207 gttgttagtctaccctgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccg 14374130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 24435892 - 24435969
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || ||  ||||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  24435892 gttgatagtctaccttgcacaa-cttggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 24435969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 24776838 - 24776927
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcg 182  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||| ||||||||||||| ||| ||||||| ||||    
T  24776838 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaatattttcg 24776927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 171
Target Start/End: Complemental strand, 31731572 - 31731538
Alignment:
Q  137 tcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||| |||||||||||||||||||||||    
T  31731572 tcttaaagaaagcgacctggtcgtgactcaacccg 31731538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 1414074 - 1414146
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactca 166  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| ||||||| ||||||||||    
T  1414074 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactca 1414146  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 13301552 - 13301584
Alignment:
Q  137 tcttaaagaaatcgacctggtcgtgactcaacc 169  Q
    ||||||||||| |||||||||||||||||||||    
T  13301552 tcttaaagaaagcgacctggtcgtgactcaacc 13301584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 37248818 - 37248894
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacc 169  Q
    |||| |||||| ||||||| ||  | || ||||| | |||||| ||||||||| | |||||||||||||||||||||    
T  37248818 gttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacc 37248894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 7e-27; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 795328 - 795397
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  795328 attaaaccatatttgagggtgttatttctcgaacgattacttacggtgcagtacgtaatcgaacaggtga 795397  T

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Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 232
Target Start/End: Original strand, 795428 - 795569
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg-taatatcttcggtggagatt 191  Q
    ||||||||||||||||||| |||||| |  ||||||| | ||  ||||| | ||| ||  ||||||||||||||||||| |  |||||||||||| ||||    
T  795428 gttgttagtctaccttgcataaactctggcagtgtcgtgcaacgtcttacataaagcggtctggtcgtgactcaacccggtcctatcttcggtggtgatt 795527  T
Q  192 tcgattttgttaaaa-ggtacttttctgaactcgaaaaacaa 232  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  795528 tcgattttattaaaaaggtacttttctgaactcgaaaaacaa 795569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 1688809 - 1688878
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    |||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1688809 attaaatcatatttgagggtgttatttctcgaacgattacttacggtgcagtacgtaatcgaacaggtga 1688878  T

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Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 1741031 - 1741101
Alignment:
Q  18 attaaaccat-ttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  1741031 attaaaccatattttgagggtgttatttctcgaacgattacttacggtgcagtacgtaatcaaacaggtga 1741101  T

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Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 213
Target Start/End: Original strand, 1688910 - 1689029
Alignment:
Q  94 ttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg-taatatcttcggtggagattt 192  Q
    |||||| ||||||||||| |||||| | ||||| ||| |||  ||||||||||| |||||||||||||||| ||| || ||||||||||||||  |||||    
T  1688910 ttgttaatctaccttgcacaaactcgggtagtgccgcaaaacgtcttaaagaaagcgacctggtcgtgacttaactcgttaatatcttcggtgttgattt 1689009  T
Q  193 cgattttgttaaaaggtactt 213  Q
    || |||| |||||||||||||    
T  1689010 cg-tttttttaaaaggtactt 1689029  T

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Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 229
Target Start/End: Original strand, 2617279 - 2617414
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcggtggagatt 191  Q
    ||||||||||||||||||| ||||||   ||||| |||||||  ||||||||||| |||| |||| |||||||||||| |||||||||||| |||   ||    
T  2617279 gttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcgacatggttgtgactcaaccctgtaatatcttcgttggtagtt 2617378  T
Q  192 tcgattttgttaaaaggtacttttctgaactcgaaaaa 229  Q
    || ||||   | ||||||||||||||||| ||||||||    
T  2617379 tcaattt--attaaaggtacttttctgaattcgaaaaa 2617414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 1689896 - 1689952
Alignment:
Q  31 tgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  1689896 tgagggtgttatttctcaaacgattacttacggtgcagcacgtaatcgaacaggtga 1689952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 53358271 - 53358175
Alignment:
Q  137 tcttaaagaaatcgacctggtcgtgactcaacccgt-aatatcttcggtggagatttcgattttgttaaaaggtacttttctgaactcgaaaaacaa 232  Q
    ||||||||||| |||||||| ||||||||||||| | |||||||||| ||  || ||  ||||| |||||||||| |||||||||||||||||||||    
T  53358271 tcttaaagaaagcgacctggccgtgactcaacccattaatatcttcgatgatgaattaaattttattaaaaggtagttttctgaactcgaaaaacaa 53358175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 25023857 - 25023916
Alignment:
Q  28 ttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  25023857 ttttgagtgtgttatttctagaacgattacttacggtgcagtacgtaatcgaacaagtga 25023916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 27605157 - 27605259
Alignment:
Q  92 agttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacc-cgtaatatcttcggtggagat 190  Q
    |||||||||||||||||||| |||||| | |||||  ||||||| ||||||||| | |||| ||||||||||||||||  ||||||| |||| ||| |||    
T  27605157 agttgttagtctaccttgcacaaactcgggtagtgctgcgaaatgtcttaaagagagcgacttggtcgtgactcaacctggtaatatattcgatggtgat 27605256  T
Q  191 ttc 193  Q
    |||    
T  27605257 ttc 27605259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 26706947 - 26706890
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    |||||||||||||||||||||| ||||||||  ||||||| |||||||||||||||||    
T  26706947 ttgagggtgttatttctcgaaccattacttacagtgcagtgcgtaatcgaacaggtga 26706890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 27605070 - 27605127
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||||||||||||||||||| ||||||||| |||||| ||| |||||||||||||||    
T  27605070 ttgagggtgttatttctcgaatgattacttacggtgcaatacataatcgaacaggtga 27605127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 54270716 - 54270639
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||| ||||||||||| |||||||||||||||||| ||||    
T  54270716 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactcaccccg 54270639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 23071488 - 23071532
Alignment:
Q  41 atttctcgaacgattacttatggtgcagtacgtaatcgaacaggt 85  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  23071488 atttctcgaacgattatttaaggtgcagtacgtaatcgaacaggt 23071532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 2617178 - 2617245
Alignment:
Q  18 attaaaccat-ttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacagg 84  Q
    |||||||||| |||| || ||||||||||| ||||||||||||| ||||| |||| ||||||||||||    
T  2617178 attaaaccatatttttagagtgttatttctagaacgattacttacggtgcggtacataatcgaacagg 2617245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 3476969 - 3477046
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  3476969 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 3477046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 4117623 - 4117712
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcg 182  Q
    |||| |||||||||||||| || || || ||||| |||||||| |||||| |||| |||||||||||||||||| ||| ||||||| ||||    
T  4117623 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaatgtcttaacgaaagcgacctggtcgtgactcaccccagtaatattttcg 4117712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 10586205 - 10586283
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| ||  || | ||||| || ||  | ||||||||||| |||||||||||||||||||||||    
T  10586205 gttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacccg 10586283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 17357910 - 17357836
Alignment:
Q  93 gttgttagtctaccttgcaaa-aactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactca 166  Q
    |||| |||||||||||||| | || | || ||||| |||||||  ||||||||||||||||||||||||||||||    
T  17357910 gttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgtgactca 17357836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 17368791 - 17368714
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  17368791 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 17368714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 21494325 - 21494399
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaa 167  Q
    ||||||||||||||||||| |||||  | || ||||| || | |||||||||| | |||||||||||||||||||    
T  21494325 gttgttagtctaccttgcacaaacttgggtactgtcgtgatacatcttaaagagagcgacctggtcgtgactcaa 21494399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 23074352 - 23074402
Alignment:
Q  37 tgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||||||||||||| | || ||| ||||||||||||||||||||||||||    
T  23074352 tgttatttctcgaacaagtatttacggtgcagtacgtaatcgaacaggtga 23074402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 33089366 - 33089443
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  33089366 gttgttagtctaccttgcacaa-ctagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccg 33089443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 17364137 - 17364058
Alignment:
Q  93 gttgttagtctaccttgcaaa-aactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| | || | || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  17364137 gttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 17364058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 31002854 - 31002799
Alignment:
Q  32 gagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||||||||||||||||||||| |  ||||||||||||  ||||| |||||||||    
T  31002854 gagggtgttatttctcgaacgatcatatatggtgcagtatttaatcaaacaggtga 31002799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 20090685 - 20090762
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  20090685 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 20090762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 20095810 - 20095887
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  20095810 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 20095887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 20810444 - 20810367
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | |||||  ||||||  ||||||||| | |||||||||||||||||||||||    
T  20810444 gttgttagtctaccttgcacaa-ctagggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtgactcaacccg 20810367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 34129192 - 34129269
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  | || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  34129192 gttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcagcccg 34129269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 53119599 - 53119522
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| ||  | || ||||| |||||||  ||||||||| | ||||||| |||||||||||||||    
T  53119599 gttgttagtctaccttgcacaacttgag-tagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacccg 53119522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 3482446 - 3482518
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactca 166  Q
    |||| |||||||||||||| ||| | || || || |||||||  ||||||||||| ||||||||||||||||||    
T  3482446 gttgctagtctaccttgcacaaatt-aggtaatgccgcgaaaagtcttaaagaaagcgacctggtcgtgactca 3482518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 49971474 - 49971523
Alignment:
Q  120 gatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacc 169  Q
    ||||||| | |||||  ||||||||| |||||||||||||||||||||||    
T  49971474 gatagtgccacgaaacgtcttaaagagatcgacctggtcgtgactcaacc 49971523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 55128862 - 55128790
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactca 166  Q
    |||| ||||||||||| || || || || ||||| |||||||  ||||||||||| ||||||||||||||||||    
T  55128862 gttgctagtctaccttacacaa-cttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca 55128790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 10586111 - 10586175
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| || ||||||||||||||||||||||| |  || |||||||||  | |||||||||||||    
T  10586111 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttgatcgaacaggtga 10586175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 11658910 - 11659048
Alignment:
Q  92 agttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg-taatatcttcggtggagat 190  Q
    |||||||||||||||||||| ||| ||   ||||| || ||||| ||||||||||| |||| ||||| |||||||||| | ||||||||||||||| |||    
T  11658910 agttgttagtctaccttgcacaaattcgagtagtgccgtgaaatgtcttaaagaaagcgacttggtcatgactcaacctgataatatcttcggtggtgat 11659009  T
Q  191 ttcgattttgttaaaaggtacttttctgaactcgaaaaac 230  Q
    ||||||||| || |||| ||||||| ||||||||||||||    
T  11659010 ttcgattttatt-aaagatacttttatgaactcgaaaaac 11659048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 19538459 - 19538380
Alignment:
Q  92 agttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||||||||||||||||||| |||||| ||||||| || ||||| ||||||||||| |||||||||||||||||||||||    
T  19538459 agttgttagtctaccttgcacaaactcggatagtgccgtgaaatgtcttaaagaaagcgacctggtcgtgactcaacccg 19538380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 28945341 - 28945273
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtg 86  Q
    |||||||||| |||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||    
T  28945341 attaaaccatatttgagggtgttatttctagaatgattacttacggtgcagtgcgtaatcgaacaggtg 28945273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 39543061 - 39543009
Alignment:
Q  31 tgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacag 83  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39543061 tgagggtgttatttcttgaacgattacttatggtgcagtacgtaatcgaacag 39543009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 22844878 - 22844773
Alignment:
Q  106 cttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcggtggagatttcgattttgttaa 204  Q
    |||||| |||||| ||||||| || ||||| ||||||||||| |||| ||||||||||||| |||  ||||||| ||||||| ||||| |||||| ||||    
T  22844878 cttgcacaaactcggatagtggcgtgaaatgtcttaaagaaagcgacatggtcgtgactcaccccaataatatcctcggtggtgattttgattttattaa 22844779  T
Q  205 aaggta 210  Q
    ||||||    
T  22844778 aaggta 22844773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 27556736 - 27556667
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||||||||  ||||||||||||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  27556736 attaaaccatacttgagggtgttatttctcgaacgattacttacggtgcaatacgtaattgaacatgtga 27556667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 19538353 - 19538285
Alignment:
Q  171 gtaatatcttcggtggagatttcgattttgttaaaaggtacttttctgaactcgaaaaacaatatggac 239  Q
    |||||||||||||||| ||||| |||||| ||||||||||| ||||||||||| |||||||| ||||||    
T  19538353 gtaatatcttcggtggtgatttagattttattaaaaggtacgtttctgaactcaaaaaacaacatggac 19538285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 11658812 - 11658880
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| |||| ||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||||||    
T  11658812 attaagccatatttgagggtgttatttctcga-cgactacttacggtgcaatacgtaatcgaacaggtga 11658880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 39542440 - 39542497
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    |||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||    
T  39542440 ttgagggtgttatttcttcaacgattacttatggtgcaatatgtaatcgaacaggtga 39542497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 28855164 - 28855108
Alignment:
Q  31 tgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    |||||||||||||||||||||||||| ||| |||| ||||| |||||||||||||||    
T  28855164 tgagggtgttatttctcgaacgattatttacggtgtagtacttaatcgaacaggtga 28855108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 42914714 - 42914637
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || || || ||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  42914714 gttgttagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtgactcaacccg 42914637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 28855078 - 28854999
Alignment:
Q  92 agttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||||||||||||||||| | |||||  ||||||| || ||||  ||||||||||| ||||| ||| |||||||||||||    
T  28855078 agttgttagtctaccttgtacaaacttggatagtgccgtgaaacgtcttaaagaaagcgaccgggttgtgactcaacccg 28854999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 6297908 - 6297986
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| ||  || | ||||| || ||  | ||||||||||| |||||||||||||||||||||||    
T  6297908 gttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacccg 6297986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 29907415 - 29907480
Alignment:
Q  121 atagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcggtg 185  Q
    ||||||||||||||  ||||||| | |||||||||||||||||| ||||| ||||| |||||||||    
T  29907415 atagtgtcgcgaaacgtcttaaaaagatcgacctggtcgtgacttaacccggtaatctcttcggtg 29907480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 19538552 - 19538488
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| || ||| ||||||||||||||||||||| ||| |||| ||||| |||||||||| ||||    
T  19538552 accatattagagagtgttatttctcgaacgattatttacggtgtagtacttaatcgaacaagtga 19538488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 6297823 - 6297878
Alignment:
Q  32 gagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||||||||||||||||||||| |  || |||||||||  |||||||||||||||    
T  6297823 gagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtga 6297878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 5089350 - 5089277
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaa 167  Q
    |||||||||||||||||| | ||||  ||||||| |||||||  ||||||||| | |||||||||| ||||||||    
T  5089350 gttgttagtctaccttgc-acaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcatgactcaa 5089277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 6298013 - 6298075
Alignment:
Q  171 gtaatatcttcggtggagatttcgattttgtt-aaaaggtacttttctgaactcgaaaaacaa 232  Q
    |||||||||||||||| |||||||| ||| || |||||||||  |||||||| ||||||||||    
T  6298013 gtaatatcttcggtggtgatttcgactttattaaaaaggtacgcttctgaacccgaaaaacaa 6298075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 28854924 - 28854866
Alignment:
Q  174 atatcttcggtggagatttcgattttgttaaaaggtacttttctgaactcgaaaaacaa 232  Q
    ||||||| || || |||||||||||| ||||||| ||| ||||||| ||||||||||||    
T  28854924 atatctttggcggtgatttcgattttattaaaagatacgtttctgagctcgaaaaacaa 28854866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 42723474 - 42723551
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  42723474 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 42723551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 42728643 - 42728720
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  42728643 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 42728720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 44096374 - 44096297
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  44096374 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 44096297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 44754619 - 44754696
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  44754619 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 44754696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 44759785 - 44759862
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  44759785 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 44759862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 40518523 - 40518572
Alignment:
Q  122 tagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  40518523 tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 40518572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 232
Target Start/End: Complemental strand, 27556627 - 27556599
Alignment:
Q  204 aaaggtacttttctgaactcgaaaaacaa 232  Q
    |||||||||||||||||||||||||||||    
T  27556627 aaaggtacttttctgaactcgaaaaacaa 27556599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 43115 - 43031
Alignment:
Q  149 cgacctggtcgtgactcaacccg-taatatcttcggtggagatttcgattttgttaaaaggtacttttctgaactcgaaaaacaa 232  Q
    ||||||| | ||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  43115 cgacctgattgtgacgcaacccgataatatcttcggtggtaatttcgattttgttaaaaggtacttttctgaactcgaaaaacaa 43031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 43276 - 43214
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaa 80  Q
    |||||||||| ||| ||||  |||||||||||| ||||||||| |||| ||||||||||||||    
T  43276 attaaaccatatttaaggggtttatttctcgaatgattacttacggtgtagtacgtaatcgaa 43214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 7875015 - 7875090
Alignment:
Q  16 caattaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctg 91  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| || || ||||||||    
T  7875015 caattaaaccatatttgaggatgttatttctcgaacgattacttacggtgcagtacgtaattgatcaagtgagctg 7875090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 19640465 - 19640390
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgagttgtt 98  Q
    ||||| |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||    
T  19640465 accatatttgagggtgttatctctcgaacgattatttacggtgcagtacgtaatcgaacaggtgaactgagctgtt 19640390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 19640258 - 19640186
Alignment:
Q  161 gactcaacccg-taatatcttcggtggagatttcgattttgttaaaaggtacttttctgaactcgaaaaacaa 232  Q
    ||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||  |||||||||||||||    
T  19640258 gactcaacccggtaatatcttcggtggtgatttcgattttattaaaaggtactttttagaactcgaaaaacaa 19640186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 12934469 - 12934387
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccgtaata 176  Q
    |||| |||||||||||||| || ||||| ||||| |||||||| ||||||||||| |||||||||||||||||| || ||||||    
T  12934469 gttgctagtctaccttgcacaa-ctcaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactcacccggtaata 12934387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 9973534 - 9973457
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||||| |||||||||||| || ||  ||||||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  9973534 gttgttcgtctaccttgcacaa-cttggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaacccg 9973457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 16539435 - 16539512
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  16539435 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 16539512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 16626227 - 16626150
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  16626227 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 16626150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 27256210 - 27256148
Alignment:
Q  171 gtaatatcttcggtggagatttcgattttgtt-aaaaggtacttttctgaactcgaaaaacaa 232  Q
    |||||||||||||||| |||||||| ||| || |||||||||  |||||||||||||||||||    
T  27256210 gtaatatcttcggtggtgatttcgactttattaaaaaggtacgcttctgaactcgaaaaacaa 27256148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 27256315 - 27256237
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| ||  || | ||||| || ||  | ||||||||||| |||||||||||||||||||||||    
T  27256315 gttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacccg 27256237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 40865480 - 40865542
Alignment:
Q  171 gtaatatcttcggtggagatttcgattttgttaaa-aggtacttttctgaactcgaaaaacaa 232  Q
    |||||||||||||||| |||||||| ||| ||||| ||||||| |||||||| ||||||||||    
T  40865480 gtaatatcttcggtggtgatttcgactttattaaataggtactcttctgaacccgaaaaacaa 40865542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 42572017 - 42571940
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  42572017 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 42571940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 47177142 - 47177219
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  47177142 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 47177219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 19687202 - 19687145
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| |||||||||||||||||||||||||   |||||||| ||||||| |||||||    
T  19687202 ttgagagtgttatttctcgaacgattacttaccatgcagtacttaatcgatcaggtga 19687145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 22857715 - 22857787
Alignment:
Q  98 tagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||||||||||||| || || |||||||| |||||||  ||||||||||| ||||||| |||||||||| ||||    
T  22857715 tagtctaccttgcacaa-cttagatagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccccg 22857787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 20932648 - 20932700
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaaca 82  Q
    |||| |||||||||||||||||||||||||| | ||||||| ||||| |||||    
T  20932648 ttgaaggtgttatttctcgaacgattacttacgatgcagtatgtaattgaaca 20932700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 21081062 - 21081141
Alignment:
Q  93 gttgttagtctaccttgcaaa-aactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| | || | || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  21081062 gttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 21081141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 33226486 - 33226416
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgact 164  Q
    ||||||||||||||||||| || || || ||||| |||||||  ||||||||| | ||||||||||||||||    
T  33226486 gttgttagtctaccttgcataa-cttaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgact 33226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 24169972 - 24170022
Alignment:
Q  30 ttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaa 80  Q
    |||||||| |||||||||| | | |||||||||||| ||||||||||||||    
T  24169972 ttgagggttttatttctcgcatgtttacttatggtgaagtacgtaatcgaa 24170022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 32212677 - 32212754
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  | || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  32212677 gttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 32212754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 33238074 - 33237997
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  33238074 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 33237997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 47999047 - 47998970
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  47999047 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 47998970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 7875164 - 7875245
Alignment:
Q  137 tcttaaagaaatcgacctggtcgtgactcaacccg-taatatcttcggtggagatttcgattttgttaaaaggtacttttct 217  Q
    ||||||||||| ||||||| || | |||||||| | ||||||||||||||| ||||||| ||||   | |||||||||||||    
T  7875164 tcttaaagaaagcgacctgatcattactcaacctggtaatatcttcggtggtgatttcgttttttcaacaaggtacttttct 7875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 17495475 - 17495403
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactca 166  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||| ||| ||||||||||||||||||    
T  17495475 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17495403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 17557739 - 17557811
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactca 166  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||| ||| ||||||||||||||||||    
T  17557739 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17557811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 19640367 - 19640295
Alignment:
Q  97 ttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacc 169  Q
    ||||||||||||||| |||||| | || ||||| ||||  |||||||||||  ||| || |||||||||||||    
T  19640367 ttagtctaccttgcacaaactcgggtaatgtcgtgaaacgtcttaaagaaagagacatgatcgtgactcaacc 19640295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 27256409 - 27256345
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| || ||||||||||||||||||||||| |  || |||||| ||  |||||||||||||||    
T  27256409 accatattagagggtgttatttctcgaacgatcatatacggtgcaatatttaatcgaacaggtga 27256345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 8267853 - 8267931
Alignment:
Q  94 ttgttagtctaccttgcaaaaactcagatagtgtcgc-gaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||||||||||||||||| |||||| ||||||||||  ||||  ||||||||||| |||||||||||||||||||||||    
T  8267853 ttgttagtctaccttgcacaaactcggatagtgtcggtgaaacgtcttaaagaaagcgacctggtcgtgactcaacccg 8267931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 14724421 - 14724341
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgagttgtt 98  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| || || ||| |||||||||| |||| ||| ||||||    
T  14724421 attaaaccatatttgacggtgttatttctcgaacgattacttatagtacaatacataatcgaacatgtgatctgtgttgtt 14724341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 13893802 - 13893737
Alignment:
Q  16 caattaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaac 81  Q
    |||||||||||| |||||||||||||||||||||||||||| |||  |||||| || |||||||||    
T  13893802 caattaaaccatatttgagggtgttatttctcgaacgattatttacagtgcagcacctaatcgaac 13893737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 232
Target Start/End: Complemental strand, 14724320 - 14724182
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaa-cccgtaatatcttcggtggagatt 191  Q
    ||||||||||||||||| | |||||||||||||| | | |||  |  |||||||| ||||||||| ||||| ||| |  ||||||||||  |||| ||||    
T  14724320 gttgttagtctaccttgtacaaactcagatagtgccacaaaacgtagtaaagaaaacgacctggttgtgacacaatcatgtaatatctttagtggtgatt 14724221  T
Q  192 tcgattttgttaaaaggtacttttctgaactcgaaaaacaa 232  Q
    |||||||   | |||||||||||| ||||||||||||||||    
T  14724220 tcgattt--attaaaggtacttttatgaactcgaaaaacaa 14724182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 33055205 - 33055141
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| || |||||||||||||||||||| |||| ||| | |||||||| |||||||||||||||    
T  33055205 accatattagagggtgttatttctcgaacaattatttacgatgcagtacttaatcgaacaggtga 33055141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 8267758 - 8267833
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgagttgtt 98  Q
    ||||| || ||||||||||||||||||||||||| |||  ||||| ||| |||||||||| |||| ||| ||||||    
T  8267758 accatattagagggtgttatttctcgaacgattatttacagtgcaatacttaatcgaacatgtgaactgggttgtt 8267833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 25188295 - 25188386
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg-taatatcttcgg 183  Q
    ||||||||||||||||||| |||||||  ||||| |||||||  |||| |||||| | ||||| | |||||||||| || ||||||||||||    
T  25188295 gttgttagtctaccttgcacaaactcaagtagtgccgcgaaacttcttcaagaaagcaacctgatagtgactcaacacgataatatcttcgg 25188386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 10106175 - 10106098
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  10106175 gttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccg 10106098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 11251136 - 11251213
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  11251136 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 11251213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 27716515 - 27716438
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  27716515 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 27716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 37404439 - 37404516
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  37404439 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 37404516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 37409560 - 37409637
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  37409560 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 37409637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 38734347 - 38734270
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  38734347 gttgttagtctaccttgcacaa-ctagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccg 38734270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 41097974 - 41098052
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| ||  || | ||||| || ||  | ||||||||||| |||||||||||||||||||||||    
T  41097974 gttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacccg 41098052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 13893699 - 13893655
Alignment:
Q  188 gatttcgattttgttaaaaggtacttttctgaactcgaaaaacaa 232  Q
    |||||||||||| || |||||||||||||| ||||||||||||||    
T  13893699 gatttcgattttatttaaaggtacttttctaaactcgaaaaacaa 13893655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 8267958 - 8268020
Alignment:
Q  171 gtaatatcttcggtggagatttcgattttgtt-aaaaggtacttttctgaactcgaaaaacaa 232  Q
    |||||||||||| ||| |||||||||||| || ||||||||| ||||||||| || |||||||    
T  8267958 gtaatatcttcgatggtgatttcgattttattaaaaaggtacgtttctgaacccgtaaaacaa 8268020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 11387853 - 11387930
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||| ||| |||||||||||||||||| ||||    
T  11387853 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcaccccg 11387930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 13890885 - 13890808
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| ||| |||  ||||||||| | |||||||||||||||||||||||    
T  13890885 gttgttagtctaccttgcacaa-cttgggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccg 13890808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 26651189 - 26651266
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| ||| ||| |||||||||| |  ||||||||||||||||||||||    
T  26651189 gttgttagtctaccttgcacaa-cttgggtagtgccgcaaaacatcttaaagagagtgacctggtcgtgactcaacccg 26651266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 36684738 - 36684815
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  36684738 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 36684815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 5725051 - 5724979
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactca 166  Q
    |||| |||||||||||||| ||  | || ||||| |||||||  ||||||||||| ||||||||||||||||||    
T  5725051 gttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5724979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 25188197 - 25188275
Alignment:
Q  18 attaaaccatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgagttgtt 98  Q
    ||||| |||| |||||||||||||||  | ||||||  ||||| |||||| ||| |||||||||| |||| ||||||||||    
T  25188197 attaacccatatttgagggtgttatt--tagaacgagcacttacggtgcaatacataatcgaacatgtgaactgagttgtt 25188275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 41097880 - 41097944
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| || |||| |||||||||||||||||| |  || |||||||||  |||||||||||||||    
T  41097880 accatattagaggatgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtga 41097944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 186
Target Start/End: Complemental strand, 33848091 - 33847998
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccgtaatatcttcggtgg 186  Q
    |||||| ||| |||||||| |||||| | ||||| ||||||| || || |||||| | ||||| ||||||||||||||||||||||||||||||    
T  33848091 gttgttggtccaccttgcacaaactcgggtagtggcgcgaaacattttgaagaaaactacctgatcgtgactcaacccgtaatatcttcggtgg 33847998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 34818627 - 34818702
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtgagctgagttgtt 98  Q
    ||||| || ||||||||||||||||||||||| |  || |||||||||  ||||||||||||||| ||||||||||    
T  34818627 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtgaactgagttgtt 34818702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 34818722 - 34818798
Alignment:
Q  94 ttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc 170  Q
    |||||||||||||||||| ||  || | |||||||| ||  | ||||||||||| ||||||||||||||||||||||    
T  34818722 ttgttagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaagaaagcgacctggtcgtgactcaaccc 34818798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 19430086 - 19430009
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  19430086 gttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccg 19430009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 19435588 - 19435511
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  19435588 gttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccg 19435511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 19566235 - 19566158
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  19566235 gttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccg 19566158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 19571737 - 19571660
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  19571737 gttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccg 19571660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 25368119 - 25368181
Alignment:
Q  171 gtaatatcttcggtggagatttcgattttgtt-aaaaggtacttttctgaactcgaaaaacaa 232  Q
    |||||||||||||||| |||||||| ||| || |||||||||  |||||||||||||||||||    
T  25368119 gtaatatcttcggtggtgatttcgactttattaaaaaggtacgcttctgaactcgaaaaacaa 25368181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 31030600 - 31030523
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| ||  |  | |||||||||||||  ||||||||| | |||||||||||||||||||||||    
T  31030600 gttgttagtctaccttgcataatttggg-tagtgtcgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccg 31030523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 25368015 - 25368095
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccgta 173  Q
    ||||||||||||||||||| ||  || | |||||||| ||  | ||||||| |||  ||||||||||||||||||||||||    
T  25368015 gttgttagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaaaaaagtgacctggtcgtgactcaacccgta 25368095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 21644104 - 21644181
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||| ||| ||||    
T  21644104 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgattcaccccg 21644181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 33616750 - 33616823
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaa 167  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | |||||||||||||||||||    
T  33616750 gttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaa 33616823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 37771679 - 37771617
Alignment:
Q  171 gtaatatcttcggtggagatttcgattttgtt-aaaaggtacttttctgaactcgaaaaacaa 232  Q
    |||||||||||||||| |||||||| ||| || |||||||||  |||||||| ||||||||||    
T  37771679 gtaatatcttcggtggtgatttcgactttattaaaaaggtacgcttctgaacccgaaaaacaa 37771617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 42514397 - 42514474
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||| ||||||| ||||    
T  42514397 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcatgactcaccccg 42514474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 170
Target Start/End: Complemental strand, 37771740 - 37771707
Alignment:
Q  137 tcttaaagaaatcgacctggtcgtgactcaaccc 170  Q
    ||||||||||| ||||||||||||||||||||||    
T  37771740 tcttaaagaaagcgacctggtcgtgactcaaccc 37771707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 25367908 - 25367972
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| || ||||||||||||||||||||||| |  || |||||| ||  |||||||||||||||    
T  25367908 accatattagagggtgttatttctcgaacgatcatatacggtgcaatatttaatcgaacaggtga 25367972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 3635 - 3558
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  3635 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 13763 - 13840
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  13763 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 13840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 19221 - 19310
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc-gtaatatcttcg 182  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||| ||||||||||||| ||| ||||||| ||||    
T  19221 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaatattttcg 19310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 63004 - 62942
Alignment:
Q  171 gtaatatcttcggtggagatttcgattttgtt-aaaaggtacttttctgaactcgaaaaacaa 232  Q
    |||||||||||||||| |||||||| ||| || |||||||||  |||||||||||||||||||    
T  63004 gtaatatcttcggtggtgatttcgactttattaaaaaggtacgcttctgaactcgaaaaacaa 62942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 33991 - 34069
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||| ||||||||| | |||||  | ||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  33991 gttgttattctaccttgtacaaactttggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccg 34069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 31617 - 31540
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  31617 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 31540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 1248 - 1325
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaaccc 170  Q
    ||||||||||||||||||| ||  || | ||||| || ||  | ||||||||||| ||||||||||||||||||||||    
T  1248 gttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaaccc 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 1154 - 1218
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| || ||||||||||||||||||||||| |  || |||||||||  |||||||||||||||    
T  1154 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacaggtga 1218  T

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Target: scaffold0061 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 45951 - 45887
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| |||||||||||||||||||||||||| |  || |||||||||  |||| ||||||||||    
T  45951 accatatttgagggtgttatttctcgaacgatcatatacggtgcagtatttaatggaacaggtga 45887  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 152836 - 152900
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| |||||||||||||||||||||||||| |  || |||||||||  |||| ||||||||||    
T  152836 accatatttgagggtgttatttctcgaacgatcatatacggtgcagtatttaatggaacaggtga 152900  T

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Target: scaffold0594 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 9231 - 9308
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||| ||||||| || || || ||||| |||||||  ||||||||||| |||||||||||||||||| ||||    
T  9231 gttgctagtcttccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 9308  T

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Target: scaffold0132 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 2795 - 2872
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||||| |||||  |||||||||   |||||||||||||||||||||||    
T  2795 gttgttagtctaccttgcacaa-cttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactcaacccg 2872  T

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Target: scaffold0132; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 10755 - 10832
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||||| |||||  |||||||||   |||||||||||||||||||||||    
T  10755 gttgttagtctaccttgcacaa-cttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactcaacccg 10832  T

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Target: scaffold0055 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 3130 - 3053
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  3130 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 3053  T

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Target: scaffold0052 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 81405 - 81482
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    |||| |||||||||||||| ||  |||| ||||| |||||||  ||||||||| | |||||||||||||||||| ||||    
T  81405 gttgctagtctaccttgcacaat-tcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccg 81482  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 1637 - 1560
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | |||||||||||||||| ||||||    
T  1637 gttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgacttaacccg 1560  T

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Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 7118 - 7041
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactcaacccg 171  Q
    ||||||||||||||||||| || ||  | ||||| |||||||  ||||||||| | |||||||||||| ||||||||||    
T  7118 gttgttagtctaccttgcacaa-cttgggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtaactcaacccg 7041  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.00000008; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 37082 - 37010
Alignment:
Q  93 gttgttagtctaccttgcaaaaactcagatagtgtcgcgaaatatcttaaagaaatcgacctggtcgtgactca 166  Q
    |||| |||||||||||||| ||  | || ||||| |||||||  ||||||||||| ||||||||||||||||||    
T  37082 gttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 37010  T

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Target: scaffold0060; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 47785 - 47846
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacagg 84  Q
    ||||| || ||||||||||||||||||||||| |  || |||||||||  ||||||||||||    
T  47785 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacagg 47846  T

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Target: scaffold0060; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 52828 - 52888
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacag 83  Q
    ||||| || ||||||||||||||||||||||| |  || |||||||||  |||||||||||    
T  52828 accatattagagggtgttatttctcgaacgatcatatacggtgcagtatttaatcgaacag 52888  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 35584 - 35648
Alignment:
Q  23 accatttttgagggtgttatttctcgaacgattacttatggtgcagtacgtaatcgaacaggtga 87  Q
    ||||| || ||||||||||||||||||||||| |  ||||||||| ||  |||||| ||||||||    
T  35584 accatattagagggtgttatttctcgaacgatcatatatggtgcaatatttaatcgtacaggtga 35648  T

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