View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11009_high_27 (Length: 241)

Name: NF11009_high_27
Description: NF11009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11009_high_27
NF11009_high_27
[»] chr8 (52 HSPs)
chr8 (137-224)||(36673944-36674031)
chr8 (21-120)||(10007770-10007869)
chr8 (21-116)||(12351920-12352015)
chr8 (21-112)||(29968344-29968434)
chr8 (21-129)||(5513968-5514075)
chr8 (21-116)||(1823551-1823646)
chr8 (21-116)||(1857996-1858091)
chr8 (21-116)||(12353368-12353461)
chr8 (21-124)||(24122874-24122976)
chr8 (21-115)||(10006344-10006438)
chr8 (21-110)||(1824085-1824174)
chr8 (21-110)||(1858530-1858619)
chr8 (21-116)||(8388463-8388556)
chr8 (21-116)||(22221371-22221466)
chr8 (21-116)||(22227713-22227808)
chr8 (21-116)||(30335638-30335733)
chr8 (23-117)||(11282006-11282100)
chr8 (21-115)||(22220388-22220482)
chr8 (21-114)||(18979127-18979220)
chr8 (27-112)||(11287779-11287864)
chr8 (21-106)||(18978029-18978113)
chr8 (23-117)||(8389698-8389792)
chr8 (21-115)||(30336508-30336602)
chr8 (21-116)||(32207332-32207425)
chr8 (21-113)||(43661267-43661359)
chr8 (24-116)||(43661833-43661925)
chr8 (21-126)||(24123905-24124007)
chr8 (23-112)||(40471156-40471244)
chr8 (59-115)||(36249552-36249608)
chr8 (23-106)||(18970920-18971002)
chr8 (21-116)||(24359808-24359901)
chr8 (21-116)||(38980051-38980146)
chr8 (21-116)||(39011148-39011243)
chr8 (21-115)||(11283216-11283310)
chr8 (21-115)||(38974795-38974889)
chr8 (21-115)||(39005893-39005987)
chr8 (21-113)||(29043400-29043492)
chr8 (21-117)||(32968454-32968550)
chr8 (33-117)||(42982676-42982760)
chr8 (38-117)||(5514294-5514372)
chr8 (59-117)||(11456636-11456694)
chr8 (21-117)||(2379931-2380023)
chr8 (35-116)||(45114537-45114618)
chr8 (21-117)||(30568885-30568980)
chr8 (21-112)||(30570263-30570353)
chr8 (21-115)||(32973943-32974037)
chr8 (59-121)||(36250901-36250963)
chr8 (21-111)||(45112875-45112963)
chr8 (58-115)||(24483143-24483200)
chr8 (21-98)||(24488687-24488763)
chr8 (68-118)||(11288914-11288964)
chr8 (26-83)||(18488274-18488331)
[»] chr1 (51 HSPs)
chr1 (21-115)||(51684366-51684460)
chr1 (21-117)||(24422798-24422894)
chr1 (23-117)||(11437208-11437302)
chr1 (23-116)||(11436041-11436134)
chr1 (21-116)||(52274967-52275062)
chr1 (21-115)||(36613911-36614005)
chr1 (21-118)||(35067009-35067106)
chr1 (22-116)||(36612852-36612945)
chr1 (21-115)||(39699774-39699867)
chr1 (21-117)||(23980473-23980569)
chr1 (23-115)||(45148581-45148672)
chr1 (21-117)||(51685772-51685868)
chr1 (21-112)||(24426082-24426173)
chr1 (21-116)||(39698562-39698656)
chr1 (21-123)||(45149977-45150079)
chr1 (21-116)||(52827346-52827441)
chr1 (23-125)||(39153125-39153227)
chr1 (38-119)||(14999281-14999361)
chr1 (21-126)||(43058775-43058879)
chr1 (38-118)||(7674525-7674603)
chr1 (24-115)||(39222483-39222575)
chr1 (21-117)||(43060013-43060109)
chr1 (21-116)||(44404441-44404536)
chr1 (23-126)||(45157218-45157320)
chr1 (21-115)||(41364829-41364922)
chr1 (21-118)||(7675466-7675562)
chr1 (21-117)||(52276170-52276266)
chr1 (21-117)||(52828077-52828173)
chr1 (21-116)||(33088624-33088719)
chr1 (33-124)||(35594208-35594298)
chr1 (21-112)||(37526885-37526975)
chr1 (23-118)||(50680329-50680423)
chr1 (23-117)||(11190383-11190477)
chr1 (21-119)||(12389989-12390086)
chr1 (38-117)||(39151929-39152008)
chr1 (23-112)||(45156052-45156141)
chr1 (23-118)||(7983047-7983141)
chr1 (21-112)||(30249497-30249588)
chr1 (21-116)||(41366138-41366232)
chr1 (21-112)||(43378720-43378810)
chr1 (37-120)||(50681627-50681710)
chr1 (42-116)||(14999983-15000057)
chr1 (21-117)||(35595199-35595296)
chr1 (21-112)||(40384727-40384819)
chr1 (21-115)||(46066525-46066616)
chr1 (59-121)||(21185202-21185264)
chr1 (59-116)||(21945707-21945763)
chr1 (21-120)||(25652710-25652808)
chr1 (39-120)||(16290088-16290170)
chr1 (21-113)||(31194057-31194147)
chr1 (69-116)||(39221357-39221405)
[»] chr2 (43 HSPs)
chr2 (21-118)||(38840500-38840597)
chr2 (22-125)||(36449768-36449871)
chr2 (21-117)||(7899889-7899985)
chr2 (21-118)||(7898688-7898785)
chr2 (21-117)||(18904365-18904461)
chr2 (21-117)||(23869542-23869637)
chr2 (21-117)||(38839240-38839336)
chr2 (21-116)||(22848190-22848285)
chr2 (21-115)||(18299373-18299467)
chr2 (21-116)||(22587961-22588055)
chr2 (21-115)||(41878092-41878188)
chr2 (21-115)||(1034476-1034570)
chr2 (21-123)||(11938796-11938897)
chr2 (21-116)||(11258818-11258913)
chr2 (21-117)||(18905995-18906090)
chr2 (21-117)||(41879219-41879315)
chr2 (38-117)||(18868922-18869001)
chr2 (21-114)||(13030293-13030383)
chr2 (21-117)||(36450928-36451023)
chr2 (24-122)||(802601-802698)
chr2 (21-118)||(18797243-18797341)
chr2 (21-112)||(26544152-26544242)
chr2 (33-120)||(24476863-24476948)
chr2 (21-116)||(11257621-11257715)
chr2 (38-117)||(16446152-16446231)
chr2 (33-119)||(18300743-18300827)
chr2 (21-91)||(18869170-18869241)
chr2 (32-116)||(32739622-32739706)
chr2 (21-116)||(24475224-24475318)
chr2 (21-124)||(26545528-26545631)
chr2 (38-112)||(13567975-13568049)
chr2 (22-116)||(13570565-13570659)
chr2 (21-91)||(22587525-22587594)
chr2 (21-91)||(28617946-28618015)
chr2 (21-114)||(1033212-1033303)
chr2 (24-83)||(810791-810850)
chr2 (21-117)||(1093153-1093248)
chr2 (57-116)||(21837298-21837355)
chr2 (22-56)||(32739710-32739744)
chr2 (31-112)||(25298804-25298885)
chr2 (59-116)||(26829333-26829390)
chr2 (69-125)||(1091657-1091713)
chr2 (21-112)||(8535663-8535752)
[»] chr5 (47 HSPs)
chr5 (21-117)||(25523067-25523163)
chr5 (21-116)||(19752911-19753005)
chr5 (21-117)||(16650862-16650958)
chr5 (21-117)||(18486909-18487005)
chr5 (23-118)||(40255681-40255776)
chr5 (22-116)||(36486496-36486590)
chr5 (21-117)||(28538674-28538770)
chr5 (28-118)||(25524141-25524232)
chr5 (33-115)||(22940641-22940723)
chr5 (21-118)||(33160293-33160390)
chr5 (21-124)||(5778843-5778946)
chr5 (21-118)||(19754137-19754235)
chr5 (22-112)||(28539828-28539917)
chr5 (21-117)||(7311588-7311684)
chr5 (23-125)||(24332903-24333005)
chr5 (21-115)||(25056388-25056482)
chr5 (23-113)||(36485302-36485392)
chr5 (21-117)||(20216770-20216866)
chr5 (21-112)||(42195137-42195226)
chr5 (40-117)||(5730439-5730517)
chr5 (21-119)||(25055408-25055506)
chr5 (21-119)||(42196207-42196305)
chr5 (38-115)||(1796054-1796131)
chr5 (21-117)||(5777899-5777993)
chr5 (25-116)||(33158097-33158188)
chr5 (33-115)||(20214196-20214277)
chr5 (21-112)||(2686408-2686501)
chr5 (21-118)||(18154491-18154586)
chr5 (21-74)||(25524105-25524158)
chr5 (37-116)||(18485137-18485216)
chr5 (22-116)||(1015483-1015577)
chr5 (22-112)||(38834090-38834179)
chr5 (23-116)||(21835040-21835132)
chr5 (21-112)||(2186774-2186864)
chr5 (21-115)||(5962579-5962671)
chr5 (33-126)||(2373367-2373460)
chr5 (67-116)||(31576615-31576664)
chr5 (43-120)||(41663754-41663831)
chr5 (68-124)||(2373138-2373194)
chr5 (23-83)||(5730871-5730931)
chr5 (23-115)||(21834928-21835019)
chr5 (38-117)||(1016887-1016966)
chr5 (21-92)||(1797304-1797375)
chr5 (23-62)||(16650045-16650084)
chr5 (41-91)||(34893689-34893739)
chr5 (79-117)||(38476745-38476783)
chr5 (67-119)||(23040292-23040344)
[»] chr4 (53 HSPs)
chr4 (21-117)||(1963194-1963290)
chr4 (21-112)||(35935540-35935631)
chr4 (23-117)||(1290207-1290301)
chr4 (21-113)||(19750582-19750673)
chr4 (21-113)||(19789133-19789224)
chr4 (21-112)||(8758844-8758935)
chr4 (21-116)||(31599788-31599883)
chr4 (21-115)||(10471395-10471489)
chr4 (21-117)||(26421629-26421724)
chr4 (21-117)||(48780246-48780342)
chr4 (21-112)||(12129626-12129717)
chr4 (21-115)||(31600992-31601086)
chr4 (24-118)||(49308038-49308130)
chr4 (21-121)||(17388218-17388317)
chr4 (21-105)||(21539078-21539162)
chr4 (21-117)||(25685829-25685925)
chr4 (21-121)||(52491614-52491714)
chr4 (21-117)||(1835109-1835205)
chr4 (27-115)||(1964454-1964542)
chr4 (21-117)||(13509366-13509461)
chr4 (27-119)||(17382989-17383080)
chr4 (21-116)||(10470545-10470640)
chr4 (21-115)||(25684934-25685028)
chr4 (21-112)||(8155741-8155831)
chr4 (21-122)||(37728572-37728672)
chr4 (21-117)||(5526133-5526228)
chr4 (21-117)||(8757673-8757768)
chr4 (21-115)||(1834119-1834214)
chr4 (21-115)||(10447006-10447101)
chr4 (21-116)||(48781053-48781147)
chr4 (21-116)||(5525359-5525453)
chr4 (21-117)||(13386012-13386110)
chr4 (23-127)||(1289085-1289189)
chr4 (21-117)||(10448267-10448363)
chr4 (21-116)||(13386539-13386635)
chr4 (21-116)||(3928865-3928960)
chr4 (21-117)||(21177995-21178090)
chr4 (21-112)||(35934347-35934436)
chr4 (37-116)||(3927665-3927744)
chr4 (38-117)||(49306773-49306851)
chr4 (21-115)||(50909679-50909774)
chr4 (21-91)||(54110635-54110705)
chr4 (21-101)||(27257967-27258047)
chr4 (21-115)||(33310096-33310187)
chr4 (22-118)||(50909270-50909365)
chr4 (22-112)||(37727700-37727789)
chr4 (32-117)||(55603549-55603633)
chr4 (40-116)||(14868889-14868964)
chr4 (40-116)||(14876970-14877045)
chr4 (22-94)||(46638733-46638805)
chr4 (64-115)||(51291421-51291472)
chr4 (62-119)||(14804541-14804598)
chr4 (67-116)||(20919584-20919633)
[»] chr3 (63 HSPs)
chr3 (21-116)||(54540797-54540892)
chr3 (23-122)||(29931219-29931318)
chr3 (23-122)||(29980373-29980472)
chr3 (23-117)||(7758400-7758494)
chr3 (21-117)||(7267642-7267737)
chr3 (21-124)||(22776819-22776922)
chr3 (21-117)||(534497-534593)
chr3 (22-118)||(7268835-7268930)
chr3 (21-116)||(12703507-12703601)
chr3 (21-124)||(47614176-47614279)
chr3 (22-116)||(29932707-29932800)
chr3 (22-116)||(29981861-29981954)
chr3 (21-117)||(12700173-12700267)
chr3 (21-125)||(47610587-47610691)
chr3 (27-119)||(51038803-51038895)
chr3 (23-118)||(19984846-19984941)
chr3 (21-116)||(24516459-24516554)
chr3 (21-116)||(54539754-54539849)
chr3 (21-115)||(46719941-46720035)
chr3 (21-114)||(8456479-8456571)
chr3 (21-117)||(8875904-8876000)
chr3 (21-116)||(46721227-46721322)
chr3 (33-116)||(55192014-55192096)
chr3 (23-117)||(19986079-19986175)
chr3 (21-117)||(5029690-5029785)
chr3 (21-117)||(47609695-47609791)
chr3 (21-115)||(51469972-51470066)
chr3 (21-126)||(28263118-28263223)
chr3 (21-112)||(40426785-40426877)
chr3 (57-117)||(47615591-47615651)
chr3 (21-115)||(49216247-49216341)
chr3 (21-115)||(51037536-51037629)
chr3 (21-115)||(52840611-52840705)
chr3 (23-112)||(23770416-23770505)
chr3 (21-96)||(34019152-34019227)
chr3 (29-115)||(53901403-53901487)
chr3 (21-115)||(535789-535883)
chr3 (40-118)||(5001197-5001275)
chr3 (21-119)||(28262189-28262286)
chr3 (21-118)||(52276301-52276398)
chr3 (21-117)||(51470462-51470557)
chr3 (21-117)||(52281554-52281650)
chr3 (32-124)||(53614810-53614902)
chr3 (21-123)||(18442622-18442725)
chr3 (21-123)||(19487696-19487799)
chr3 (23-118)||(51347265-51347360)
chr3 (23-112)||(52104484-52104569)
chr3 (23-117)||(11671350-11671443)
chr3 (21-128)||(54987014-54987119)
chr3 (21-115)||(18456070-18456165)
chr3 (21-88)||(31645000-31645067)
chr3 (21-116)||(52839036-52839131)
chr3 (24-117)||(23769855-23769947)
chr3 (22-102)||(11670397-11670477)
chr3 (23-110)||(6250585-6250672)
chr3 (79-118)||(31039257-31039296)
chr3 (21-112)||(49398130-49398220)
chr3 (21-112)||(53616023-53616114)
chr3 (62-115)||(25336358-25336411)
chr3 (59-120)||(50296201-50296262)
chr3 (23-87)||(6171251-6171314)
chr3 (64-108)||(22775783-22775826)
chr3 (68-112)||(39843054-39843098)
[»] scaffold0302 (2 HSPs)
scaffold0302 (27-117)||(17468-17558)
scaffold0302 (21-115)||(18783-18877)
[»] chr7 (38 HSPs)
chr7 (21-115)||(18371424-18371518)
chr7 (21-123)||(17782560-17782662)
chr7 (21-118)||(22629480-22629580)
chr7 (25-117)||(22630463-22630555)
chr7 (21-115)||(31659622-31659717)
chr7 (21-117)||(3227601-3227697)
chr7 (21-117)||(42886293-42886389)
chr7 (21-102)||(18372464-18372544)
chr7 (21-126)||(31949809-31949914)
chr7 (21-117)||(7501859-7501955)
chr7 (21-117)||(31949320-31949416)
chr7 (37-128)||(11658367-11658457)
chr7 (21-117)||(127335-127429)
chr7 (21-113)||(17781663-17781755)
chr7 (25-112)||(128612-128699)
chr7 (21-116)||(7500454-7500548)
chr7 (21-116)||(47369780-47369875)
chr7 (21-110)||(14999162-14999249)
chr7 (21-118)||(21505413-21505508)
chr7 (21-115)||(47525374-47525468)
chr7 (21-112)||(11662558-11662649)
chr7 (21-114)||(3227109-3227201)
chr7 (43-116)||(20163585-20163658)
chr7 (21-117)||(30439365-30439460)
chr7 (41-117)||(34174010-34174085)
chr7 (41-108)||(47524532-47524599)
chr7 (21-115)||(48934910-48935004)
chr7 (23-116)||(31661018-31661111)
chr7 (31-115)||(769413-769497)
chr7 (23-116)||(34352795-34352888)
chr7 (60-116)||(5111441-5111497)
chr7 (23-118)||(46482594-46482689)
chr7 (79-116)||(9822334-9822371)
chr7 (79-116)||(10724259-10724296)
chr7 (66-123)||(15681587-15681644)
chr7 (31-116)||(42271552-42271637)
chr7 (80-124)||(21810109-21810153)
chr7 (57-117)||(32253441-32253501)
[»] chr6 (37 HSPs)
chr6 (21-118)||(10784589-10784687)
chr6 (21-112)||(1829610-1829701)
chr6 (21-118)||(7316301-7316398)
chr6 (21-118)||(27437825-27437922)
chr6 (21-117)||(8659263-8659359)
chr6 (21-117)||(8821871-8821967)
chr6 (21-117)||(16704504-16704600)
chr6 (21-124)||(8822800-8822903)
chr6 (22-117)||(14822358-14822453)
chr6 (22-118)||(14823583-14823680)
chr6 (21-115)||(7314880-7314973)
chr6 (21-116)||(8660211-8660305)
chr6 (21-120)||(27322075-27322173)
chr6 (21-120)||(34834586-34834685)
chr6 (21-102)||(10785920-10786000)
chr6 (21-116)||(3721611-3721706)
chr6 (39-117)||(6842308-6842386)
chr6 (23-91)||(26575063-26575131)
chr6 (64-118)||(27447963-27448017)
chr6 (40-117)||(3722533-3722610)
chr6 (34-110)||(29473082-29473158)
chr6 (33-116)||(1828738-1828821)
chr6 (21-116)||(3333033-3333128)
chr6 (21-112)||(5658759-5658850)
chr6 (23-117)||(6840192-6840284)
chr6 (23-114)||(12382720-12382811)
chr6 (23-115)||(16703570-16703659)
chr6 (21-90)||(34830927-34830996)
chr6 (67-117)||(16415586-16415636)
chr6 (23-117)||(17496791-17496890)
chr6 (40-118)||(27318312-27318389)
chr6 (21-124)||(30495704-30495806)
chr6 (21-117)||(26574617-26574712)
chr6 (59-118)||(18749094-18749153)
chr6 (67-113)||(26717137-26717183)
chr6 (21-90)||(12350823-12350891)
chr6 (59-116)||(34834172-34834229)
[»] scaffold0019 (2 HSPs)
scaffold0019 (21-114)||(61466-61559)
scaffold0019 (21-115)||(60090-60184)
[»] scaffold0003 (2 HSPs)
scaffold0003 (21-118)||(49440-49537)
scaffold0003 (64-118)||(39341-39395)
[»] scaffold0294 (2 HSPs)
scaffold0294 (21-117)||(5445-5541)
scaffold0294 (21-117)||(4440-4536)
[»] scaffold2034 (2 HSPs)
scaffold2034 (21-115)||(233-327)
scaffold2034 (21-94)||(985-1058)
[»] scaffold0320 (1 HSPs)
scaffold0320 (23-117)||(19486-19580)
[»] scaffold0112 (1 HSPs)
scaffold0112 (21-115)||(37148-37241)
[»] scaffold0045 (1 HSPs)
scaffold0045 (39-115)||(49109-49185)
[»] scaffold1303 (1 HSPs)
scaffold1303 (21-118)||(1436-1533)
[»] scaffold0632 (1 HSPs)
scaffold0632 (21-117)||(3315-3410)
[»] scaffold0586 (2 HSPs)
scaffold0586 (21-117)||(6341-6437)
scaffold0586 (21-124)||(9034-9135)
[»] scaffold0321 (1 HSPs)
scaffold0321 (27-113)||(18730-18816)
[»] scaffold0093 (2 HSPs)
scaffold0093 (21-114)||(2472-2564)
scaffold0093 (21-114)||(7095-7187)
[»] scaffold0369 (1 HSPs)
scaffold0369 (23-116)||(13192-13283)
[»] scaffold0049 (2 HSPs)
scaffold0049 (21-116)||(7422-7517)
scaffold0049 (21-115)||(7538-7631)
[»] scaffold0227 (1 HSPs)
scaffold0227 (21-115)||(126-220)
[»] scaffold0059 (2 HSPs)
scaffold0059 (29-114)||(4745-4829)
scaffold0059 (21-91)||(3699-3769)
[»] scaffold0186 (2 HSPs)
scaffold0186 (21-124)||(23072-23173)
scaffold0186 (65-117)||(23941-23993)
[»] scaffold0002 (1 HSPs)
scaffold0002 (59-117)||(454927-454985)
[»] scaffold0005 (1 HSPs)
scaffold0005 (62-119)||(35129-35186)


Alignment Details
Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 36674031 - 36673944
Alignment:
Q  137 gttggggtaaccatactaatcacatactttagggaggactaatccacgttggagaatctagctaaagcacctttagcatgatactgtt 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674031 gttggggtaaccatactaatcacatactttagggaggactaatccacgttggagaatctagctaaagcacctttagcatgatactgtt 36673944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 10007770 - 10007869
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    ||||||||||||||| |||||||||| |||| | |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  10007770 gctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctataa 10007869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 12352015 - 12351920
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  12352015 gctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcct 12351920  T

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Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 29968344 - 29968434
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||    
T  29968344 gctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaa-gggggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 5514075 - 5513968
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| || ||||| |||||| |||||| |||||||||||||||||||||     
T  5514075 gctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagtt-agggggtaaaagtgcactttagcctatat 5513977  T
Q  121 tttaataac 129  Q
     ||||||||    
T  5513976 attaataac 5513968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 1823646 - 1823551
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||| || ||||||||||||||||||||||  || ||||||||||| ||||||||||||||||||| |||||| |||||||||||    
T  1823646 gctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1823551  T

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Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 1858091 - 1857996
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||| || ||||||||||||||||||||||  || ||||||||||| ||||||||||||||||||| |||||| |||||||||||    
T  1858091 gctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1857996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 12353368 - 12353461
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  12353368 gctaaatcttagggggccaaaattatagtttt-gtacttagggggccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcactttagcct 12353461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 24122976 - 24122874
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    ||||||||||||||| | |||||| ||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||    
T  24122976 gctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcactttagcctaaaa 24122878  T
Q  121 ttta 124  Q
    ||||    
T  24122877 ttta 24122874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 10006438 - 10006344
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||||||||||||| |||||  |||||||| |||||||||||||| ||||| |||||||  ||||||||||||||||||||||    
T  10006438 gctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 10006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 1824085 - 1824174
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactt 110  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||  ||||||||| |||||||    
T  1824085 gctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 1858530 - 1858619
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactt 110  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||  ||||||||| |||||||    
T  1858530 gctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 8388556 - 8388463
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||| |||||||||||||  ||||| |||||||||||||||||    
T  8388556 gctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagtta--ggggggaaagtgcactttagcct 8388463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 22221371 - 22221466
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||| |||||||||||||||  |||||||| || ||||||||||| ||||| ||||||| ||| ||||||||||||||||||||    
T  22221371 gctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 22227713 - 22227808
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||| |||||||||||||||  |||||||| || ||||||||||| ||||| ||||||| ||| ||||||||||||||||||||    
T  22227713 gctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22227808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 30335733 - 30335638
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||||  ||||||||| |||||||||||||   ||||||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  30335733 gctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcct 30335638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 11282100 - 11282006
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||| |||||||||  ||||||||  |||| |||||||||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  11282100 taaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcactttaaccta 11282006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 22220482 - 22220388
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||||||||||||||||||||||||| ||| |||| || ||||||||||| | ||| |||||||  ||||||||||||||||||||||    
T  22220482 gctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagcc 22220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 18979127 - 18979220
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagc 114  Q
    |||||||| || ||||||||||||||||||||| || ||||| |||||||||||||| || || ||||||| ||||||||||||||||||||||    
T  18979127 gctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 11287864 - 11287779
Alignment:
Q  27 tcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||| ||||||| ||| | ||||||||||||||    
T  11287864 tcttagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 18978113 - 18978029
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgc 106  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||  |||| |||||| |||||||||||||||    
T  18978113 gctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 8389698 - 8389792
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||| | ||||||||||||||||||| || | | |||||||||||| ||||| ||| ||||| |||||||||||||||||| ||||    
T  8389698 taaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcactttaaccta 8389792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 30336508 - 30336602
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||| |||  |||||||||||||||||||||||||||| ||||||  || ||||| ||||||| ||||| | |||||||||||||||    
T  30336508 gctaaatcttagagggttaaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagcc 30336602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 32207332 - 32207425
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||| | ||||||||||||||||||||||||||||  | ||||||||||| ||||| || ||||  ||||| |||||||||||||||||    
T  32207332 gctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtta--ggggggaaagtgcactttagcct 32207425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 43661359 - 43661267
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttag 113  Q
    |||||||||||||||||||||||| |||||||||||| || | | ||||||||| || ||||| ||| |||||||  ||||||||||||||||    
T  43661359 gctaaatcttagggggccaaaattatagtttttgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcactttag 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 43661833 - 43661925
Alignment:
Q  24 aaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||||||||| |||||||||||| |||  |   |||||||||| ||||| ||||||||||| |||||||||||||| |||||    
T  43661833 aaatcttagggggccaaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagcct 43661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 24123905 - 24124007
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    ||||||||||||| ||| ||||||||| |||| ||||||| |||||||||||||||| ||||| ||||||| |||||   ||||| ||||||||||| |     
T  24123905 gctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagttacggggg---aagtgtactttagcctaaat 24124001  T
Q  121 tttaat 126  Q
    ||||||    
T  24124002 tttaat 24124007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 40471156 - 40471244
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||| ||||| |||||||||||||||||| ||| | | ||||||||| || ||||| |||||||| |||||||||||||||||||    
T  40471156 taaatcttaaggggctaaaattgtagtttttgtatttatg-gaccaaaattgtaagttttttaaagttaaagggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 36249608 - 36249552
Alignment:
Q  59 taggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  36249608 taggaggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcc 36249552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 18971002 - 18970920
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgc 106  Q
    ||||||||  |||| ||||||||||||||||||||||||| ||||||||||| ||  |||| |||||| |||||||||||||||    
T  18971002 taaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 24359901 - 24359808
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||| |||||||||||||||||||  || ||||| ||||| |||| |||||||||||| || ||| ||||| ||||||||||||    
T  24359901 gctaaatcttagggggtcaaaattgtagtttttgtatata-gaggcaaaaatcgcaactttttaaaagtt-agagggaaaaagagcactttagcct 24359808  T

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Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 38980051 - 38980146
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||| | ||||||||||||||||| |||||  ||| | || ||||||||| ||||  |||| ||||||| ||||||||||||||||||||||||    
T  38980051 gctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 38980146  T

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Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 39011148 - 39011243
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||| | ||||||||||||||||| |||||  ||| | || ||||||||| ||||  |||| ||||||| ||||||||||||||||||||||||    
T  39011148 gctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 39011243  T

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Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 11283216 - 11283310
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||| ||||||| ||||||||||  ||||| ||| |||| ||| |||||| ||| ||||| |||||||||||||| ||| ||||||||||||    
T  11283216 gctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcactttagcc 11283310  T

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Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 38974889 - 38974795
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||| | ||||||||||||||||| |||||  ||| | || ||||||||| ||||  |||| ||||||| |||||||||||||||||||||||    
T  38974889 gctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 38974795  T

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Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 39005987 - 39005893
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||| | ||||||||||||||||| |||||  ||| | || ||||||||| ||||  |||| ||||||| |||||||||||||||||||||||    
T  39005987 gctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 39005893  T

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Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 29043492 - 29043400
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttag 113  Q
    |||||||||||| |||  ||||||||||||||||||| |||| || |||||| || | ||||| || |||||||| ||||||||| |||||||    
T  29043492 gctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcgactttttgaaggttaagggaggaaaagtgaactttag 29043400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 32968550 - 32968454
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||| | ||| ||||||||||||| |||||  ||| | || ||||||||| ||||  |||| ||||||| |||||||||||||||||||||||||    
T  32968550 gctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccta 32968454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 42982676 - 42982760
Alignment:
Q  33 ggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||| ||||||||||||||||||    ||| |||||||||| ||| ||||||||| |||| || |||||||||||||||||||||    
T  42982676 ggggtcaaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagccta 42982760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 5514294 - 5514372
Alignment:
Q  38 caaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||||| |||| |||| |||||||||| ||||| ||| || |||||  |||||||||||||||||||    
T  5514294 caaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaatt-aggggataaaagtgcactttagccta 5514372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 11456694 - 11456636
Alignment:
Q  59 taggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||| |||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagccta 11456636  T

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Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 2379931 - 2380023
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||| |||||||||||||||| ||| |||| |||| |||||||||| ||| ||||| |||||||  |||||||||||  |||||||||||    
T  2379931 gctaaatcttaaggggccaaaattgtag-tttcgtacatagg-ggccaaaattacaactttttgaaagtta--gggggaaaagtaaactttagccta 2380023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 45114537 - 45114618
Alignment:
Q  35 ggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||||| ||||| |||    |||||||||||| ||||| ||||||| ||| |||||||||||||| |||||    
T  45114537 ggccaaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcct 45114618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 30568980 - 30568885
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||  ||||||| |||||||||||| || |||  |||||||| || ||||| ||| || || |||| ||||||||||||||||||    
T  30568980 gctaaatcttaggggatcaaaattatagtttttgtacctaagagatcaaaattgtaactttttgaaactt-agagggggaaagtgcactttagccta 30568885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 30570263 - 30570353
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    |||||||||||||||||||||||| || ||||||||| || | |  ||||||||||| ||||||||| |||  |||| ||| ||||||||||    
T  30570263 gctaaatcttagggggccaaaattctaatttttgtacataag-gatcaaaattgcaactttttaaaacttagaggggaaaaggtgcacttta 30570353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 32973943 - 32974037
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||| | ||| ||||||||||||| |||||  ||| | || ||||||||| ||||  |||| ||||||| ||||| |||||||||||||||||    
T  32973943 gctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactttagcc 32974037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 36250901 - 36250963
Alignment:
Q  59 taggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataat 121  Q
    ||||||| ||||||| ||| ||||||||| ||||||| | ||||||| |||||||||||||||    
T  36250901 taggaggtcaaaattacaactttttaaaacttaagggagaaaaagtgtactttagcctataat 36250963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 45112963 - 45112875
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttt 111  Q
    ||||| ||||||||| |||||||| || |||||||||||| ||| | |||||| ||||||||| |||||| |||| |||||| ||||||||    
T  45112963 gctaattcttaggggaccaaaattataatttttgtactta-gagactaaaattacaaatttttgaaagtt-agggaggaaaaatgcacttt 45112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 24483200 - 24483143
Alignment:
Q  58 ttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||| |||||||||||||| ||||| ||| ||| | |||||||||||||||||||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcc 24483143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 24488687 - 24488763
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaagggggg 98  Q
    ||||||||||| ||||| |||||||| |||||  || ||||| |||||||||||||| ||||| ||||||| ||||||    
T  24488687 gctaaatcttacggggc-aaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagttaggggggg 24488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 11288914 - 11288964
Alignment:
Q  68 aaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||||||| ||||| ||||||| ||| | ||||||||||||||||||||    
T  11288914 aaaattgcaagtttttgaaagttaggggtgaaaaagtgcactttagcctat 11288964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 18488274 - 18488331
Alignment:
Q  26 atcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaattttt 83  Q
    ||||||| |||||||||||||||||||||||  |||| | | |||||||||| |||||    
T  18488274 atcttagagggccaaaattgtagtttttgtatataggggactaaaattgcaacttttt 18488331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 51684460 - 51684366
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  51684460 gctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcactttagcc 51684366  T

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Target: chr1; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 24422894 - 24422798
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  24422894 gctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagccta 24422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 11437208 - 11437302
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||||||||||||||||||||||||| | | |||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  11437208 taaatcttagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagccta 11437302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 11436134 - 11436041
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  11436134 taaatcttagggggccaaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcct 11436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 52275062 - 52274967
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||| ||||||| ||||| ||||||||||||||||||    
T  52275062 gctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 52274967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 36613911 - 36614005
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| ||| |||||| ||||||||||||    
T  36613911 gctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagcc 36614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 35067009 - 35067106
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||| ||||||||||||||||||||||||||| | |||| ||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||    
T  35067009 gctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagcctat 35067106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 36612945 - 36612852
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||  |||||||||||||||||||||| ||  |||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  36612945 ctaaatcttagggggttaaaattgtagtttttgtacttaagat-ccaaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcct 36612852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 39699774 - 39699867
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| || || |||||| ||||||||||||||||||||||||    
T  39699774 gctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcactttagcc 39699867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 23980473 - 23980569
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||| | |||||||| |||||||||||||||||  ||||||||||||| ||||| |||||||  ||||||||||||||||||||||||    
T  23980473 gctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactttagccta 23980569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 45148672 - 45148581
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||| ||| |||||||||||||||||    
T  45148672 taaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagcc 45148581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 51685772 - 51685868
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| |||||||||||||||||||| |||  ||||||||| |||| ||||| |||||||  ||||||||||||||||||||||||    
T  51685772 gctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagccta 51685868  T

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Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 24426082 - 24426173
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| ||||| |||||||  ||||| |||||||||||||    
T  24426082 gctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T

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Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 39698656 - 39698562
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||| || |||||||| |||||| |||||||||| ||||||||||| || |||||||||||||||||||| |||||||||||||||||    
T  39698656 gctaaatcttagtgg-ccaaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcct 39698562  T

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Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 45149977 - 45150079
Alignment:
Q  21 gctaaatcttagggggc-caaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    ||||||||||||||||  ||||||||| ||||||||||||| | |||||||||||||| ||||| |||||| ||||||||||||||||||||| |||| |    
T  45149977 gctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttaacctaaa 45150075  T
Q  120 attt 123  Q
    ||||    
T  45150076 attt 45150079  T

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Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 52827441 - 52827346
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||||   ||||||| ||||| ||||||||| || ||||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  52827441 gctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcct 52827346  T

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Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 39153125 - 39153227
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataatt 122  Q
    |||||||||| ||| |||||||||||||||||||| || | |||||||||||||| ||||| ||| ||||||||| |||||||||||||| ||| | |||    
T  39153125 taaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcactttaaccttttatt 39153224  T
Q  123 taa 125  Q
    |||    
T  39153225 taa 39153227  T

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Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 14999361 - 14999281
Alignment:
Q  38 caaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||| |||||| ||||||||||||| ||||||||||||||    
T  14999361 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacactttagcctata 14999281  T

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Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 43058879 - 43058775
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||| |||| |||||||||||||||||||||||| || ||||||||||| ||||| |||||| |||||| ||||||| |||||| |||| |     
T  43058879 gctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagtt-agggggaaaaagtgtactttaacctacat 43058781  T
Q  121 tttaat 126  Q
    ||||||    
T  43058780 tttaat 43058775  T

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Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 7674603 - 7674525
Alignment:
Q  38 caaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  7674603 caaaattgtagtttttgtacttagg-gcccaaaattgcaagtttttaaaagtt-aggggggaaaagggcactttagcctat 7674525  T

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Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 39222483 - 39222575
Alignment:
Q  24 aaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtt-aaggggggaaaagtgcactttagcc 115  Q
    ||||||||| |||| || |||||||||||| |||||||| |||||||||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  39222483 aaatcttagagggctaacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagcc 39222575  T

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Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 43060013 - 43060109
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||| |||| ||||||||||||||||||||||| | || ||||||| ||||||||| |||||||  ||||| ||||| ||||||||||||    
T  43060013 gctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacactttagccta 43060109  T

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Target: chr1; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 44404536 - 44404441
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||| |||||||| | ||||| ||||||| | ||| ||||||||| ||||||||    
T  44404536 gctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagcct 44404441  T

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Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 45157218 - 45157320
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataatt 122  Q
    |||||||||  ||| |||||||||||||||||||| |||| |||||||||||||| ||||| ||| || ||||||| ||||||||||||||||| ||| |    
T  45157218 taaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaactt-agggggggaaagtgcactttagcctttaaat 45157316  T
Q  123 taat 126  Q
    ||||    
T  45157317 taat 45157320  T

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Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 41364922 - 41364829
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||| | ||||||| ||||| ||| ||||| |||||||||||||| ||||| |||||| ||||| ||||||||||||||||||    
T  41364922 gctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagcc 41364829  T

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Target: chr1; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 7675466 - 7675562
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||||||||||||| ||||||| || ||||| ||||||||||| ||||||||||| ||||| |||||||| || || ||||| |||||||||||||    
T  7675466 gctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtgg-aaagtacactttagcctat 7675562  T

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Target: chr1; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 52276170 - 52276266
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||| | ||| || ||||||||||||||||| |||||||||| ||||||||| |||||||   |||| ||||||||||||| ||||    
T  52276170 gctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcactttaaccta 52276266  T

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Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 52828077 - 52828173
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| | ||||||| ||||| |||||||||  ||||||||||||| ||||| ||| |||  ||||||||||||||||||| ||||    
T  52828077 gctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcactttaaccta 52828173  T

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Target: chr1; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 33088624 - 33088719
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||| | |||||||||||||||||||||||   || ||||||||||| ||||| || ||||  | |||||||||||||||||||||    
T  33088624 gctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcactttagcct 33088719  T

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Target: chr1; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 35594298 - 35594208
Alignment:
Q  33 ggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataattta 124  Q
    |||| |||||||||||||||  |||||||| || ||||||||||| ||||| ||||||| ||| |||||||||||||||||||| |||||||    
T  35594298 ggggtcaaaattgtagttttaatacttagg-ggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctttaattta 35594208  T

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Target: chr1; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 37526885 - 37526975
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||||| |||||||||| |||| | || |||||  ||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  37526885 gctaaatcttagggg-ccaaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacacttta 37526975  T

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Target: chr1; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 50680423 - 50680329
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||||||||| | |||||| |||||||| |||||||| |||||||||||||| |||||  |||||||| |||||||| ||||||||| |||||    
T  50680423 taaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaag-ggggaaaaatgcactttaacctat 50680329  T

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Target: chr1; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 11190477 - 11190383
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||| ||  |||||||| ||||||||||  ||||   |||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  11190477 taaatcttagaggatcaaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagccta 11190383  T

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Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 12389989 - 12390086
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    ||||||||| |||||||||||||| || ||||||||| |||| |  |||||| |||| ||||| |||||||||| ||||||| ||||||||||||||||    
T  12389989 gctaaatct-agggggccaaaattataatttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagcctata 12390086  T

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Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 39152008 - 39151929
Alignment:
Q  38 caaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||||||| |||| |||||||||| ||| ||||| ||| ||||||||| |||| ||||||||| ||||    
T  39152008 caaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcactttaaccta 39151929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 45156141 - 45156052
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    |||||||||| |||  ||||||||||||||||||| ||| ||| |||||||| || ||||| ||| ||||||| ||||||||| ||||||    
T  45156141 taaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaaattgtaagtttttgaaacttaagggaggaaaagtgaacttta 45156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 7983141 - 7983047
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||||||||||| ||||||||| |||||  ||| |||| |||||||||||||| || || |||||| | ||| ||||||||||||||| |||||    
T  7983141 taaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagtt-acgggagaaaagtgcactttaacctat 7983047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 30249497 - 30249588
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||| |||| |||||||||||||||||||| ||  ||  ||||||| ||| ||||| ||||||| || ||||| |||||||||||    
T  30249497 gctaaatcttaaggggtcaaaattgtagtttttgtacataaaagatcaaaattacaactttttgaaagttacggagggaagagtgcacttta 30249588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 41366138 - 41366232
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||||| ||| |||| |||||  |||||| | ||| |||||||||  ||||| ||||||| | ||||||||||||||||||||||    
T  41366138 gctaaatcttagggggctaaa-ttgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcactttagcct 41366232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 43378720 - 43378810
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||| || |||||||||| |||||||||||||| |  |||||||| || ||||| |||||||| | | |||||||||||||||    
T  43378720 gctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaa-gagagaaaagtgcacttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 50681627 - 50681710
Alignment:
Q  37 ccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||| |||||||||||| || ||||   ||||||||||||| ||||| ||| ||||| ||||||||||||||||||||| ||||    
T  50681627 ccaatattgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagccaataa 50681710  T

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Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 14999983 - 15000057
Alignment:
Q  42 attgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||| ||||||||||||| |  ||||||||||| ||||||||||||| || || ||||||| ||||||||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcct 15000057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 35595199 - 35595296
Alignment:
Q  21 gctaaatcttagggggccaaaattgt-agtttttgtacttaggaggccaaaattgcaaa-tttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||| |||||||||| ||||||| ||| |||| || ||||||||| || ||||| |||||||  ||||||||||| ||||||||||||    
T  35595199 gctaaatcttagggg-ccaaaattgttagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagccta 35595296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 40384819 - 40384727
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaattttt-aaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||| |||||||  |||||||||||||||||||| |||||| | |||||||||| ||||| |||| | ||| ||  ||||||||||||||    
T  40384819 gctaaattttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaactttttgaaaattaaagaggaaaaaagtgcacttta 40384727  T

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Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 46066616 - 46066525
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||||||| | ||||||||||||||||||| || | ||| ||||| |||| ||||| |||||||  || |||||||||||||| ||||    
T  46066616 gctaaatcttagggg-ctaaaattgtagtttttgtacataaggggctaaaatcgcaactttttgaaagtta--ggaggaaaagtgcacttaagcc 46066525  T

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Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 21185264 - 21185202
Alignment:
Q  59 taggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataat 121  Q
    |||||||||||||  |||| ||||||||| |||||||  ||||| ||||||||||||||||||    
T  21185264 taggaggccaaaagcgcaactttttaaaacttaagggatgaaaaatgcactttagcctataat 21185202  T

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Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 21945763 - 21945707
Alignment:
Q  59 taggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||||||| ||||||||| ||||  |||||||||| |||||||||||    
T  21945763 taggaggccaaaattgcaactttttaaaacttaa-aggggaaaagtacactttagcct 21945707  T

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Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 25652808 - 25652710
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||| |||||||| || || |||||||||||| | |  ||||||||||| ||||| ||| || ||  || ||| ||||||||||||||||||    
T  25652808 gctaaatcttagcgggccaaatttataatttttgtacttaagggatcaaaattgcaagtttttgaaaatt-agaaggaaaaggtgcactttagcctataa 25652710  T

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Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 16290170 - 16290088
Alignment:
Q  39 aaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta-aggggggaaaagtgcactttagcctataa 120  Q
    ||||||||||||||| ||| || | | |||||||||||| ||||| || |||| | |||| |||| |||||||||||||||||    
T  16290170 aaaattgtagtttttatacataagggaccaaaattgcaactttttgaacgttagatggggaaaaaatgcactttagcctataa 16290088  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 31194147 - 31194057
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttag 113  Q
    |||||||||||  ||||||||||| |||||||||||| |  | ||||||| | | || |||||||||||||  ||| ||||||||| ||||||    
T  31194147 gctaaatcttaaagggccaaaattttagtttttgtacatgtggggccaaattcgtaactttttaaaagtta--gggtgaaaagtgccctttag 31194057  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 39221405 - 39221357
Alignment:
Q  69 aaattgcaaatttttaaaagtta-aggggggaaaagtgcactttagcct 116  Q
    ||||||||| ||||| ||||||| |||||||||||||||| ||||||||    
T  39221405 aaattgcaagtttttgaaagttagaggggggaaaagtgcaatttagcct 39221357  T

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Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 38840500 - 38840597
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  38840500 gctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctat 38840597  T

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Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 36449871 - 36449768
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataat 121  Q
    |||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |    
T  36449871 ctaattcttgggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctatatt 36449772  T
Q  122 ttaa 125  Q
    ||||    
T  36449771 ttaa 36449768  T

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Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 7899889 - 7899985
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  7899889 gctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 7899985  T

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Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 7898785 - 7898688
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||||||||||||||||||||||||||| | |||||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||| |||||    
T  7898785 gctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcactttaacctat 7898688  T

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Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 18904461 - 18904365
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||| ||||||||  |||||||||||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  18904461 gctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagccta 18904365  T

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Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 23869542 - 23869637
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||| || |||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  23869542 gctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtggaaaagtgcactttagccta 23869637  T

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Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 38839336 - 38839240
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||| ||| ||||||||| |||| ||||||||||||||    
T  38839336 gctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagccta 38839240  T

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Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 22848285 - 22848190
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||| ||||||||||||||||||||| ||||| | |||||||||||| ||||| ||||||| ||||| ||||||||||||||||||    
T  22848285 gctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 22848190  T

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Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 18299467 - 18299373
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||||||||||| || ||||| ||||||| ||| |||||||||||||||||||    
T  18299467 gctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcactttagcc 18299373  T

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Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 22587961 - 22588055
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||| | |||||||| |||||||||||||    
T  22587961 gctaaatcttaaggggccaaaattgtagtttttgtacatagg-ggccaaaattgcaagtttttgaaagttatgaggggaaaaatgcactttagcct 22588055  T

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Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 41878188 - 41878092
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaa---tttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||   ||||| |||||||||||||| ||||||||||||||||    
T  41878188 gctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaagggggg-aaagtgcactttagcc 41878092  T

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Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 1034476 - 1034570
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||| | ||||||| ||||| |||| |||| |||||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  1034476 gctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

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Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 11938796 - 11938897
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    ||||| |||||||||| ||||||| || |||||||||||||||| |||||||||||| ||||| ||||||| ||| ||||||||||||||||||||| ||    
T  11938796 gctaattcttaggggggcaaaattata-tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctaaaa 11938894  T
Q  121 ttt 123  Q
    |||    
T  11938895 ttt 11938897  T

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Target: chr2; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 11258818 - 11258913
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta-aggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| ||||| ||||||| || |||||||| |||||||||||||    
T  11258818 gctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaa-tgcactttagcct 11258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 18905995 - 18906090
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||| |||||||||| ||||| |||||||   |||||||||||||||||||||||    
T  18905995 gctaaatcttagggg-ctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagccta 18906090  T

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Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 41879219 - 41879315
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||| ||||||||  ||||||||||||| |||||||||| |||||||||||||| ||||| ||| ||||||||| ||||||| |||||||||||    
T  41879219 gctaaattttagggggttaaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagccta 41879315  T

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Target: chr2; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 18869001 - 18868922
Alignment:
Q  38 caaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||| |||||||| ||||||||||||    
T  18869001 caaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagccta 18868922  T

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Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 13030383 - 13030293
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagc 114  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |||||||||| ||| ||||| |||||||  |||||||||||||||||||||    
T  13030383 gctaaatcttagggggcaaaaattgtaatttttgtacttagg-ggccaaaattacaagtttttgaaagtta--gggggaaaagtgcactttagc 13030293  T

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Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 36450928 - 36451023
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||| |||| ||||||| |||||||||||| |||||||||| | |||||||||||| ||||| |||||||| ||||||||||||||||||| ||||    
T  36450928 gctaattcttggggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaa-gggggaaaagtgcactttaaccta 36451023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 802601 - 802698
Alignment:
Q  24 aaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataatt 122  Q
    ||||||||| ||| ||||||||||||||||||||  ||| |||||||||||||| ||||| ||| || ||||||||||||| ||||||||||| |||||    
T  802601 aaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactttagcctttaatt 802698  T

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Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 18797341 - 18797243
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaagggg-ggaaaagtgcactttagcctat 118  Q
    ||||||| |||||||| |||||||||||||||  |||||| | || ||||||||||| ||||| ||||||| |||| ||||||||||||||||||||||    
T  18797341 gctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagcctat 18797243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 26544242 - 26544152
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||  ||||||||| |||||||||||| ||| |||  |||||||||||||||    
T  26544242 gctaaatcttaggaggctaaaactgtagtttttgtacttagga-accaaaattgtaaatttttaaaaattaggggtagaaaagtgcacttta 26544152  T

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Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 24476863 - 24476948
Alignment:
Q  33 ggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||| ||||||||||||||||||||||||| | |||||||| ||| ||||||||||||  ||||| ||||||||||| ||||| ||||    
T  24476863 ggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt--gggggaaaaagtgcactctagccaataa 24476948  T

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Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 11257715 - 11257621
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||| ||||||||||||||||||| |||||||| |   |||||||||| ||||| |||||||  || | ||||||||||||||||||    
T  11257715 gctaaatcttaggaggccaaaattgtagtttttatacttagg-gtttaaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagcct 11257621  T

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Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 16446231 - 16446152
Alignment:
Q  38 caaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||||| ||| ||||  |||||||||| ||||| |||||||||||  ||||| ||||||||||||||    
T  16446231 caaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagccta 16446152  T

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Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 18300743 - 18300827
Alignment:
Q  33 ggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    |||| ||||||||||||||||||||||||| || ||||||||||| ||| | |||||||  |||||||||||||| |||||| ||||    
T  18300743 ggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta--gggggaaaagtgcaatttagcttata 18300827  T

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Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 18869170 - 18869241
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattg-caaatttttaaaagtta 91  Q
    |||||||||||||||   ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  18869170 gctaaatcttaggggataaaaattgtagtttttgtacttagaaggccaaaattgccaaatttttgaaagtta 18869241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 32739706 - 32739622
Alignment:
Q  32 gggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||||||||||||| || | |||||||||||||| ||||| ||||||| |||   |||| | |||||||||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagttaggggaaaaaaaatacactttagcct 32739622  T

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Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 24475318 - 24475224
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||  |||||||||||||||||||||||| |||||||| ||| |||||| ||| ||||| |||||| ||||| |  ||| ||||||||||||    
T  24475318 gctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagtttttgaaagtt-aggggagggaagcgcactttagcct 24475224  T

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Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 26545528 - 26545631
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||| ||| ||||||| || |||||||| ||| | || ||||||||||||||||| ||||| | |  || |||||||||||||||| || ||    
T  26545528 gctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaaatttttgaaagtcatgaaggaaaaagtgcactttagcttaaaa 26545627  T
Q  121 ttta 124  Q
    ||||    
T  26545628 ttta 26545631  T

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Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 13568049 - 13567975
Alignment:
Q  38 caaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||| ||| |||   |||||||||| |||||||    
T  13568049 caaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

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Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 13570565 - 13570659
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||| |||| |||| |||||||| ||||||||||||||| | | | |||||||||| ||||| ||||||| |||  ||||| |||||||||||||    
T  13570565 ctaattcttgggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcct 13570659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 22587594 - 22587525
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta 91  Q
    ||||||||||||||||||||||||||||||||||||  |||| | ||||||||| || ||||| |||||||    
T  22587594 gctaaatcttagggggccaaaattgtagtttttgta-ataggggaccaaaattggaactttttgaaagtta 22587525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 28618015 - 28617946
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta 91  Q
    ||||||||||||||||| ||||||| ||||||||||||| || ||||||||||||||  |||| |||||||    
T  28618015 gctaaatcttagggggc-aaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtta 28617946  T

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Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 1033303 - 1033212
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagc 114  Q
    |||||||||||| |||   ||||| || |||| ||| ||||| |||||||||||||| |||||||||||| ||||||||||||| |||||||||    
T  1033303 gctaaatcttagaggggttaaattataattttggtatttagg-ggccaaaattgcaagtttttaaaagtt-aggggggaaaagtacactttagc 1033212  T

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Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 810791 - 810850
Alignment:
Q  24 aaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaattttt 83  Q
    ||||||||| ||| ||||||||||||||||||||  ||| |||||||||||||| |||||    
T  810791 aaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagttttt 810850  T

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Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 1093153 - 1093248
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||| |||  ||||||||| ||||||||  ||||    || ||||||||  ||||||||||||||||||||||| | ||||||||||||    
T  1093153 gctaaatcttagcgggttaaaattgtaatttttgtatatagggaatcacaattgcaacattttaaaagttaaggggggaaaa-tacactttagccta 1093248  T

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Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 21837298 - 21837355
Alignment:
Q  57 cttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||| |||||||||||||| ||||| |||||||  |||| ||||||||||||||||||    
T  21837298 cttagggggccaaaattgcaagtttttgaaagtta--ggggaaaaagtgcactttagcct 21837355  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 32739744 - 32739710
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgta 56  Q
    |||||||||| ||||||||||||||||||||||||    
T  32739744 ctaaatcttaaggggccaaaattgtagtttttgta 32739710  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 25298885 - 25298804
Alignment:
Q  31 agggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||||| | ||||| |   |||||||||||||| ||||  ||||||||  || |||| |||||||||||||||    
T  25298885 agggggccaaaattgcaattttttttaataggaggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcacttta 25298804  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 26829333 - 26829390
Alignment:
Q  59 taggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||| ||||||||| ||||  |||||||| |||||||  |||||||||||||||||||    
T  26829333 tagggggccaaaatcgcaacattttaaaacttaagggatgaaaagtgcactttagcct 26829390  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 1091713 - 1091657
Alignment:
Q  69 aaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataatttaa 125  Q
    |||||||||  ||||||||||||||||||  ||| ||||||||| |||||| |||||    
T  1091713 aaattgcaacattttaaaagttaagggggagaaaatgcactttaacctatattttaa 1091657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 8535663 - 8535752
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||| |||||||||| |||||||||||||| | ||||||   |  ||||||| ||| |||||||||||||  || ||||||||| ||||||    
T  8535663 gctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagtta--ggaggaaaagtgtacttta 8535752  T

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Target: chr5 (Bit Score: 77; Significance: 7e-36; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 25523163 - 25523067
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  25523163 gctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 25523067  T

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Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 19753005 - 19752911
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  19753005 gctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcct 19752911  T

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Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 16650862 - 16650958
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||| |||||||||| ||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  16650862 gctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagccta 16650958  T

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Target: chr5; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 18486909 - 18487005
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||||||||||||| |||| | |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  18486909 gctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagccta 18487005  T

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Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 40255681 - 40255776
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||||||||||||||||||||||||| |||| ||||| || ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  40255681 taaatcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagcctat 40255776  T

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Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 36486496 - 36486590
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||| |||||||||||| |||||    
T  36486496 ctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcct 36486590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 28538770 - 28538674
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||| |||||||||||||||||||||| | || ||||||||||| ||||| ||||||| ||| |||||||||||||||||||||    
T  28538770 gctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagccta 28538674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 25524141 - 25524232
Alignment:
Q  28 cttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta-aggggggaaaagtgcactttagcctat 118  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||  ||||||||||||||||||||||||||    
T  25524141 cttaggaggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcctat 25524232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 115
Target Start/End: Original strand, 22940641 - 22940723
Alignment:
Q  33 ggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||| |||||||||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  22940641 ggggtcaaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 33160293 - 33160390
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||||||| |||| |||||||||||||| | |||||||| ||| |||||||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  33160293 gctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcctat 33160390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 5778843 - 5778946
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| ||| |||||||||| ||||| |||||||  |||||||||||||||||||||||| ||    
T  5778843 gctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctacaa 5778942  T
Q  121 ttta 124  Q
    ||||    
T  5778943 ttta 5778946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 19754137 - 19754235
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggg-gaaaagtgcactttagcctat 118  Q
    |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||| |||||  |||| |||||||||||||||    
T  19754137 gctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcactttagcctat 19754235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 28539828 - 28539917
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    |||||||||||||| |||||||||||||||||||||||||  || ||||||||||| |||||||||||| ||||||||||| |||||||||    
T  28539828 ctaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 7311684 - 7311588
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||| ||||||    |||||||||||||||    
T  7311684 gctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggggggggggtgcactttagccta 7311588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 24333005 - 24332903
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataatt 122  Q
    |||||||||| ||| |||||||||||||||||||| || | |||||||||||||| ||||| ||| ||||||||| |||||||||||||| ||| | |||    
T  24333005 taaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcactttaaccttttatt 24332906  T
Q  123 taa 125  Q
    |||    
T  24332905 taa 24332903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 25056388 - 25056482
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||| |||||||||||||||  |||||||| || ||||||||||| ||||| ||||||| | | |||||||||||||||||||    
T  25056388 gctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagcc 25056482  T

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Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 36485392 - 36485302
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttag 113  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||||| || ||||| ||||||| ||| |||||| ||||||||||    
T  36485392 taaatcttagggggccaaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcactttag 36485302  T

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Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 20216770 - 20216866
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||| |||| |||||||||||||||||||||||||  ||||  || |||||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  20216770 gctaattcttggggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttaaccta 20216866  T

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Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 42195226 - 42195137
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||||| |||||||||||| |||||||| |||| ||||||||| |||| ||||| |||||||| |||||||||||||||||||    
T  42195226 gctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaacttttt-aaagttaa-gggggaaaagtgcacttta 42195137  T

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Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 5730517 - 5730439
Alignment:
Q  40 aaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaagg-ggggaaaagtgcactttagccta 117  Q
    ||||||| ||||| |||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagccta 5730439  T

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Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 25055506 - 25055408
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |  |||||||||||    || |||||||  ||||||||||||||||||||||||||    
T  25055506 gctaaatcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagcctata 25055408  T

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Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 42196207 - 42196305
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    ||||||||||||||| | |||| |||||||||||||| |||  ||||||| |  ||| ||||||||||||| |||||| ||||||||||||||||||||    
T  42196207 gctaaatcttaggggactaaaaatgtagtttttgtacatagagggccaaattcacaactttttaaaagttaggggggggaaagtgcactttagcctata 42196305  T

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Target: chr5; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 1796131 - 1796054
Alignment:
Q  38 caaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||| ||| |||||| ||||||||||||    
T  1796131 caaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcc 1796054  T

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Target: chr5; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 5777993 - 5777899
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| || ||||||||||| ||||| |||||||  ||||| ||||||||||||||||||    
T  5777993 gctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagccta 5777899  T

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Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 33158188 - 33158097
Alignment:
Q  25 aatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||| |||| |||||||||||||||||||||||||  | ||||||||||| ||||| ||||||| ||||  |||| |||||||||||||    
T  33158188 aatcttaaggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcct 33158097  T

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Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 20214277 - 20214196
Alignment:
Q  33 ggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||||||||||||||||| |||   || |||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  20214277 ggggccaaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaag-ggggaaaagtgcactttagcc 20214196  T

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Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 2686408 - 2686501
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta-agg-ggggaaaagtgcacttta 112  Q
    |||||||| |||||| |||||||| ||||||||||||||| |||  ||||||||||| ||||||||||||| ||| |||| |||||||||||||    
T  2686408 gctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagtttttaaaagttagaggagggggaaagtgcacttta 2686501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 18154586 - 18154491
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||| |||| |||| |||||||||||||||||||||||| || |||||||| || ||||| ||||||||||||  |||||| |||||||||||||    
T  18154586 gctaaattttagagggc-aaaattgtagtttttgtacttagg-ggtcaaaattgtaagtttttgaaagttaaggggaaaaaagttcactttagcctat 18154491  T

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Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 25524105 - 25524158
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattg 74  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  25524105 gctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 18485216 - 18485137
Alignment:
Q  37 ccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||| |||||  |||||||| |||||||||||||| ||||| |||||||  |||| ||||||||||||||||||    
T  18485216 ccaaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcct 18485137  T

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Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 1015577 - 1015483
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||| ||||||||||  |||||||||| ||||||||  ||| ||||||||||| || ||||||||||||| ||| ||||||||||| ||| ||||    
T  1015577 ctaattcttagggggttaaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgcatttttgcct 1015483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 38834179 - 38834090
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||| || ||||||||||||||||||| || | || |||||| |||| ||||||||||||||||||  |||| |||||||||    
T  38834179 ctaaatcttagggagctaaaattgtagtttttgtacataag-ggtcaaaatcgcaactttttaaaagttaaggggaaaaaaatgcacttta 38834090  T

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Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 21835132 - 21835040
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||| |||||||||||||||||||| |||| || ||||||  ||| ||||| ||| || || |||| |||||||||||||||||    
T  21835132 taaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaactt-agagggggaaagtgcactttagcct 21835040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 2186864 - 2186774
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    |||||||||||||||   ||||||||||||||||||| ||| || |||||||||||| ||||| ||| || |||||| |||| |||||||||    
T  2186864 gctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaactttttgaaactt-agggggaaaaaatgcacttta 2186774  T

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Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 5962579 - 5962671
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||| ||||| ||| |||||| ||||||||||||||||| | |||||||| ||||||||| ||||| |  | || |||||||||||||||||    
T  5962579 gctaaatattaggtggctaaaattatagtttttgtacttaggggaccaaaattacaaatttttgaaagtca--gtggaaaaagtgcactttagcc 5962671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 2373367 - 2373460
Alignment:
Q  33 ggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataatttaat 126  Q
    ||||||||||||||  ||||| ||  |||||||||||||| |||| ||||| ||| ||| |||  |||||||||| ||||||||| | ||||||    
T  2373367 ggggccaaaattgtcctttttttaaataggaggccaaaatcgcaactttttgaaacttaggggttgaaaagtgcagtttagcctaaattttaat 2373460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 31576615 - 31576664
Alignment:
Q  67 caaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||| |||| ||||||||| |||||||| |||||||||||||||||||    
T  31576615 caaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttagcct 31576664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 41663754 - 41663831
Alignment:
Q  43 ttgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    ||||| ||||| | |||||| ||||||||| |||| ||||||||| |||| ||| ||||| |||||||||||| ||||    
T  41663754 ttgtaattttttttcttagggggccaaaatcgcaactttttaaaacttaaagggtgaaaaatgcactttagccaataa 41663831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 2373194 - 2373138
Alignment:
Q  68 aaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataattta 124  Q
    ||||| |||| ||||||||| |||||||| |||||||||||||||| ||| ||||||    
T  2373194 aaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttagtctaaaattta 2373138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 5730871 - 5730931
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaattttt 83  Q
    |||||||||||||| | ||||||| ||||| ||||||||| ||||||||||| || |||||    
T  5730871 taaatcttagggggactaaattgtggttttggtacttagggggccaaaattggaagttttt 5730931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 21834928 - 21835019
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||| ||||| || ||||||||||||||||| | ||| ||| |||| |||||| ||||| ||| || |  |||||||||||||||||||||    
T  21834928 taaatcgtagggagctaaaattgtagtttttgttcatagaaggtcaaatttgcaactttttcaaactt-ataggggaaaagtgcactttagcc 21835019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 1016887 - 1016966
Alignment:
Q  38 caaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||||||| ||| || |||||||| ||| ||||||||| ||| ||||  |||| | ||||||| ||||    
T  1016887 caaaattgtagtttttgtacatagaagaccaaaattacaattttttaaaaattagggggaaaaaaatacactttaaccta 1016966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 1797304 - 1797375
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaa 92  Q
    ||||||||||| ||| |||||||||||||||||||   || |  ||||||||||||| ||||||||| ||||    
T  1797304 gctaaatcttaagggaccaaaattgtagtttttgtttataaggagccaaaattgcaagtttttaaaacttaa 1797375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 16650084 - 16650045
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttagg 62  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  16650084 taaatcttagagggtcaaaattgtagtttttgtacttagg 16650045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 34893739 - 34893689
Alignment:
Q  41 aattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta 91  Q
    ||||||||||||||||| ||||  ||||||||||||| ||||| |||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 34893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 117
Target Start/End: Original strand, 38476745 - 38476783
Alignment:
Q  79 tttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  38476745 tttttaaaacttaaggggtgaaaagtgcactttagccta 38476783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 23040292 - 23040344
Alignment:
Q  67 caaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    |||||| |||| ||||||||| |||||||  |||||||| |||||||||||||    
T  23040292 caaaatcgcaactttttaaaacttaagggatgaaaagtgtactttagcctata 23040344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 1963290 - 1963194
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  1963290 gctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagccta 1963194  T

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Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 35935540 - 35935631
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  35935540 gctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

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Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 1290207 - 1290301
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||||||  |||| |||||||||||||||||||||||||||||||||    
T  1290207 taaatcttagggggctaaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagccta 1290301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 19750582 - 19750673
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttag 113  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  19750582 gctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19750673  T

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Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 19789224 - 19789133
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttag 113  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  19789224 gctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19789133  T

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Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 8758844 - 8758935
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  8758844 gctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

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Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 31599883 - 31599788
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||| |||||||||||| |||||    
T  31599883 gctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcct 31599788  T

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Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 10471395 - 10471489
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  10471395 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10471489  T

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Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 26421629 - 26421724
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||| |||||| || |||||||||||||||||||||||    
T  26421629 gctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagccta 26421724  T

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Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 48780342 - 48780246
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| || ||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  48780342 gctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcactttagccta 48780246  T

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Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 12129717 - 12129626
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||| |||| ||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  12129717 gctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

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Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 31600992 - 31601086
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||| |||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||  |||| |||||||||||||||||    
T  31600992 gctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagcc 31601086  T

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Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 49308038 - 49308130
Alignment:
Q  24 aaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  49308038 aaatcatagggggc-aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcctat 49308130  T

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Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 17388218 - 17388317
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    ||||| |||| |||||||||||||||||||| |||||||| | | |||||||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  17388218 gctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcctataa 17388316  T

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Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 21539078 - 21539162
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtg 105  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  21539078 gctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtg 21539162  T

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Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 25685829 - 25685925
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||  ||||||||||||||||||||||||    
T  25685829 gctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 25685925  T

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Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 52491614 - 52491714
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    ||||||| ||||||||||||||||||||||| |||| ||||  | |||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||    
T  52491614 gctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacactttagcctataa 52491713  T
Q  121 t 121  Q
    |    
T  52491714 t 52491714  T

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Target: chr4; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 1835109 - 1835205
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| |||||||||||||||  |||||||| || ||||||||||| ||||| ||||||| ||  |||||||||||||||||||||    
T  1835109 gctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagccta 1835205  T

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Target: chr4; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 1964454 - 1964542
Alignment:
Q  27 tcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||| ||| ||||||||||||||||||| | |||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  1964454 tcttaagggaccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcc 1964542  T

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Target: chr4; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 13509366 - 13509461
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||  |||||||||||||||  ||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  13509366 gctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaaaagtacactttagccta 13509461  T

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Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 17383080 - 17382989
Alignment:
Q  27 tcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    |||| ||||||||||||||||||||||||||||| | | |||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||    
T  17383080 tcttggggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagcctata 17382989  T

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Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 10470640 - 10470545
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||| | |||||||  |||| ||||||||  || ||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  10470640 gctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 10470545  T

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Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 25685028 - 25684934
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||| | ||||||| ||||| ||||||||  || ||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  25685028 gctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 25684934  T

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Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 8155831 - 8155741
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggag-gccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    |||||||||||||||||||||||||||||||||| ||||||| | || |||||||||| ||||| |||||||  |||||||||||||||||||    
T  8155831 gctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 8155741  T

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Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 37728572 - 37728672
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||  ||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| || |||| ||||||||| |||| ||    
T  37728572 gctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaactttttaaaagtt-aggaggaaaaaatgcactttaacctaaaa 37728670  T
Q  121 tt 122  Q
    ||    
T  37728671 tt 37728672  T

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Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 5526133 - 5526228
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| | ||||||| |||||  |||||||| |||||||||||||| ||||| |||||| || |||||||||||||||||||||||    
T  5526133 gctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagccta 5526228  T

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Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 8757768 - 8757673
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||| ||| ||||||||||||||| |||||||||| ||| ||||||| || ||||| |||||||| |||| |||||||||||||||||||    
T  8757768 gctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaa-ggggaaaaagtgcactttagccta 8757673  T

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Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 1834214 - 1834119
Alignment:
Q  21 gctaaatcttaggggg-ccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||| ||||||||||||||||| ||| |||| || |||||||| || ||||| |||||||  ||||||||||||||||||||||    
T  1834214 gctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttagcc 1834119  T

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Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 10447101 - 10447006
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaag-gggggaaaagtgcactttagcc 115  Q
    ||||||||||||||||  |||||||| |||||||||| |||| ||| |||||||||| ||||| ||| ||||| ||||||||||||||||||||||    
T  10447101 gctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcactttagcc 10447006  T

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Target: chr4; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 48781053 - 48781147
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||| |||||||| | ||||||| ||||| ||||||||| | |||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  48781053 gctaaattttaggggggctaaattgtggttttagtacttagg-gaccaaaattgcaaatttttgaaagttagagggggaaaagtgcactttagcct 48781147  T

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Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 5525453 - 5525359
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| || ||||||||||| ||||| |||||| ||||||||||| || ||||||||||    
T  5525453 gctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtactttagcct 5525359  T

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Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 13386110 - 13386012
Alignment:
Q  21 gctaaatcttagggggcca-aaattgtagtttttgtacttaggaggccaaaattgcaa-atttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||  | ||||||| ||||| ||||||||| ||||||||||||||  ||||| |||||||  ||||||||||||||||||||||||    
T  13386110 gctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagccta 13386012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 1289189 - 1289085
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataatt 122  Q
    ||||||||| | ||| ||||||||||||||| |||||||  |  ||||||| ||||| ||| |||||||||||||||||||| ||||||| |||| || |    
T  1289189 taaatcttaagaggctaaaattgtagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcactttaacctaaaact 1289090  T
Q  123 taata 127  Q
    |||||    
T  1289089 taata 1289085  T

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Target: chr4; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 10448267 - 10448363
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||| ||||||| |||||||||||||||||||||||| |||| ||| ||||| |||| ||||| ||| ||| ||| ||  |||||||||||||||||    
T  10448267 gctatatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttagccta 10448363  T

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Target: chr4; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 13386539 - 13386635
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaagggggg-aaaagtgcactttagcct 116  Q
    |||| ||||||||||| | ||||||| ||||| ||||||| | || ||||||||||| ||||| ||||||| |||||| ||||||||||||||||||    
T  13386539 gctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcct 13386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 3928865 - 3928960
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||| | ||| ||||||||||||| |||||  ||| |||| ||||||||| ||||  |||| ||||||| ||||||||||||||||||||||||    
T  3928865 gctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 3928960  T

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Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 21178090 - 21177995
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||| |||||||| |||||||||||||||||| | |||| |  ||||||||||| ||| | |||||| ||||||| ||||| ||||||||||||    
T  21178090 gctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaagtt-agggggggaaagtacactttagccta 21177995  T

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Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 35934436 - 35934347
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||| |||||||||||| || ||| | |||||||| | |||||||| ||| ||||| |||||||  |||||||||||||||||||    
T  35934436 gctaaatcttaaggggccaaaattataatttctttacttaggggaccaaaattacaagtttttgaaagtta--gggggaaaagtgcacttta 35934347  T

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Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 3927744 - 3927665
Alignment:
Q  37 ccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||||  ||| | || ||||||||| ||||  ||||||||||||  |||||||||||||||||||||||    
T  3927744 ccaaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcct 3927665  T

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Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 49306851 - 49306773
Alignment:
Q  38 caaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||||||||||   |||||||||||||| ||||| ||||||  ||||  |||||||||||||||||||    
T  49306851 caaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagtt-gggggaaaaaagtgcactttagccta 49306773  T

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Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 50909679 - 50909774
Alignment:
Q  21 gctaaatctta-gggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||||  | |||||| |||| ||||||||| ||| || || |||||||||||||||||    
T  50909679 gctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaactttttaaaacttagggtggaaaaagtgcactttagcc 50909774  T

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Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 54110635 - 54110705
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta 91  Q
    ||||||| ||||||||| |||||| || ||||||||| | ||||| ||||||||||||||||| |||||||    
T  54110635 gctaaattttagggggctaaaattataatttttgtacattggaggtcaaaattgcaaattttttaaagtta 54110705  T

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Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 27257967 - 27258047
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaa 101  Q
    ||||||||||| ||||  ||||||| ||||||||||  |||  || ||||||||||| |||||||||||||||||| ||||    
T  27257967 gctaaatcttaaggggttaaaattggagtttttgtatatagagggtcaaaattgcaactttttaaaagttaaggggagaaa 27258047  T

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Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 33310096 - 33310187
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||| ||| ||||||||||| ||||||||||| |||||  || |||||| ||| |||||||||||||   ||  |||||||||||||||||    
T  33310096 gctaaatcatagagggccaaaattatagtttttgtatttagggagctaaaattacaagtttttaaaagtta---ggaaaaaagtgcactttagcc 33310187  T

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Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 50909365 - 50909270
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||||||||| ||  ||||||||||||||| ||  ||||||| ||||||||||| ||||||||| || |||||  |||| | |||||||||||||    
T  50909365 ctaaatcttaggaggttaaaattgtagtttttatatataggaggtcaaaattgcaactttttaaaactt-aggggaaaaaaatacactttagcctat 50909270  T

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Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 37727789 - 37727700
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    |||||||||| ||||  ||||||||||||||||||  || ||| |||||||| ||| ||||||||||||||| || ||||| | |||||||    
T  37727789 ctaaatcttaaggggttaaaattgtagtttttgtatataagag-ccaaaattacaactttttaaaagttaagaggagaaaaatacacttta 37727700  T

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Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 55603549 - 55603633
Alignment:
Q  32 gggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||| |||||||||||||  ||| |   |||||||||| ||||| |||||||| |||| |||||||||||||| ||||    
T  55603549 gggggccaaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaa-ggggaaaaagtgcactttaaccta 55603633  T

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Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 14868964 - 14868889
Alignment:
Q  40 aaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||| |||||  |||||||  ||||||||||||||  |||| |||| || ||||||||||||||||||||||||    
T  14868964 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcct 14868889  T

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Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 14876970 - 14877045
Alignment:
Q  40 aaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||| |||||  |||||||  ||||||||||||||  |||| |||| || ||||||||||||||||||||||||    
T  14876970 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagcct 14877045  T

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Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 46638733 - 46638805
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaagg 94  Q
    |||||||||||||||| ||||||||| ||||||| | |||| |  ||||||| ||| ||||| ||||||||||    
T  46638733 ctaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaattccaactttttgaaagttaagg 46638805  T

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Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 51291421 - 51291472
Alignment:
Q  64 ggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||| ||||||||| |||||||| ||||| || |||||||||    
T  51291421 ggccaaaattgcaactttttaaaacttaaggggtgaaaattggactttagcc 51291472  T

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Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 14804541 - 14804598
Alignment:
Q  62 gaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    |||||||||||||||| |||||||||||||||| |  |||| ||||||| | ||||||    
T  14804541 gaggccaaaattgcaattttttaaaagttaaggtgtaaaaaatgcacttaaacctata 14804598  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 20919584 - 20919633
Alignment:
Q  67 caaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||| |||| ||||||||| |||||||| ||||| |||||||||||||    
T  20919584 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcct 20919633  T

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Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 54540797 - 54540892
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||||||||||||||||||||||||||| | || ||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  54540797 gctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 54540892  T

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Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 29931318 - 29931219
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataatt 122  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||    
T  29931318 taaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctataatt 29931219  T

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Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 29980472 - 29980373
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataatt 122  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||    
T  29980472 taaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctataatt 29980373  T

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Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 7758494 - 7758400
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  7758494 taaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagccta 7758400  T

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Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 7267737 - 7267642
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||| ||||    
T  7267737 gctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaag-ggggaaaagtgcactttaaccta 7267642  T

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Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 22776819 - 22776922
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| | ||||||| ||| |||||||||||||||||||||||     
T  22776819 gctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagcctatat 22776918  T
Q  121 ttta 124  Q
    ||||    
T  22776919 ttta 22776922  T

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Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 534593 - 534497
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| | |||||  |||| |||||||||||||||||||    
T  534593 gctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagccta 534497  T

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Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 7268835 - 7268930
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||    
T  7268835 ctaaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttaacctat 7268930  T

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Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 12703507 - 12703601
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||| || ||| ||||||||||||||||||    
T  12703507 gctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtt-agagggaaaaagtgcactttagcct 12703601  T

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Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 47614279 - 47614176
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||||||||||||||||| |||||  |||||||| |||||||||||||| ||||| |||||||  |||| ||||||||||||||||| ||||    
T  47614279 gctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttagccaataa 47614180  T
Q  121 ttta 124  Q
    ||||    
T  47614179 ttta 47614176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 29932707 - 29932800
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||  |||||||||||||||||||||||    
T  29932707 ctaaatcttaaggggtcaaaattgtagtttttgtacttagg-ggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 29932800  T

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Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 29981861 - 29981954
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||  |||||||||||||||||||||||    
T  29981861 ctaaatcttaaggggtcaaaattgtagtttttgtacttagg-ggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 29981954  T

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Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 12700267 - 12700173
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||  ||||| ||||||||||||||||||    
T  12700267 gctaaatcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagccta 12700173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 47610587 - 47610691
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||  ||||||||||||||||||| ||||||     
T  47610587 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttaacctatat 47610686  T
Q  121 tttaa 125  Q
    |||||    
T  47610687 tttaa 47610691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 51038803 - 51038895
Alignment:
Q  27 tcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    ||||| ||| ||||||||||||||||||| | |||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  51038803 tcttaagggaccaaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcctata 51038895  T

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Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 19984941 - 19984846
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||||||  ||| |||||||||||||||||||| |||| |||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||    
T  19984941 taaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcctat 19984846  T

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Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 24516554 - 24516459
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||| ||||||||||||||||||||| ||||||||  ||||||||||||| ||||| ||||||| ||||| ||||||||||||| ||||    
T  24516554 gctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcactttggcct 24516459  T

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Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 54539849 - 54539754
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||  ||||||||||||||||||| ||||| ||  |||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  54539849 gctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcct 54539754  T

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Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 46720035 - 46719941
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||| || | ||||||||||||||| ||| |||| ||||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  46720035 gctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagcc 46719941  T

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Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 8456571 - 8456479
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagc 114  Q
    |||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| ||||| ||| || |||||| ||||||||||||||||    
T  8456571 gctaaatcttagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcactttagc 8456479  T

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Target: chr3; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 8876000 - 8875904
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||||||||||||||||||||||| || | ||| |||||||||  |||||  || |||||||| ||||||||||||||||||||    
T  8876000 gctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagccta 8875904  T

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Target: chr3; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 46721227 - 46721322
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||| | ||||||||||||||||||| |||| ||  ||||| |||| ||||||||||||| |||| |||||||||||||||||||    
T  46721227 gctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactttagcct 46721322  T

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Target: chr3; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 55192014 - 55192096
Alignment:
Q  33 ggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||| |||||||||||||||||| | |||||||||||    
T  55192014 ggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaa-tacactttagcct 55192096  T

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Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 19986079 - 19986175
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggagg--ccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||| ||| |||||||||||||||| ||| |||||||  |||||||||||| ||||| ||| ||||| |||||||||||||||||||||||    
T  19986079 taaatcttagagggtcaaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagccta 19986175  T

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Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 5029690 - 5029785
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||| ||||||||||  |||||||| ||||| ||||||||||||||||||||||||  |||| |||| | ||||||||||||||||||||||||||    
T  5029690 gctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagccta 5029785  T

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Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 47609791 - 47609695
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||   ||||||| ||||| ||||||||| || ||||||||||| ||||| ||||||| ||||||||||||||| |||||||||    
T  47609791 gctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttagccta 47609695  T

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Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 51470066 - 51469972
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||||||||   ||||||| ||||| ||||||||| |||||||||||||| ||||| ||| ||| || ||||||||||||||||||||    
T  51470066 gctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcc 51469972  T

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Target: chr3; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 28263118 - 28263223
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||| | ||||||||||||||||| |||||  ||| | || ||||||||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  28263118 gctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagcctacaa 28263217  T
Q  121 tttaat 126  Q
    | ||||    
T  28263218 tataat 28263223  T

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Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 40426785 - 40426877
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaatt-gcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    |||||||| |||||||||||||||||| ||||||||  || | |||| ||||| |||| ||||| ||||||||||||||||||||||||||||    
T  40426785 gctaaatcatagggggccaaaattgtaatttttgtatataaggggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

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Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 47615591 - 47615651
Alignment:
Q  57 cttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 47615651  T

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Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 49216341 - 49216247
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||| |||| || ||||||||||||||||| |||| || ||||||||||| ||||| ||| ||| | | |||||||||||||||||||    
T  49216341 gctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcc 49216247  T

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Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 51037629 - 51037536
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||| ||||||||||| ||||||||||||||||| | |||  || ||||||||||| ||||| |||||||| ||| ||||||||||||||||||    
T  51037629 gctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaa-gggagaaaagtgcactttagcc 51037536  T

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Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 52840611 - 52840705
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||| ||||||||| |||||  || |||||  ||||||||||||| ||||| ||||||| ||| ||||||| |||||||||||    
T  52840611 gctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcactttagcc 52840705  T

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Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 23770416 - 23770505
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||||| ||||||||||||||||||| || | | ||||||||| || ||||| ||| |||||||| ||||| |||||||||    
T  23770416 taaatcttagggggctaaaattgtagtttttgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcacttta 23770505  T

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Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 34019152 - 34019227
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaagggg 96  Q
    ||||||| ||||||| ||||||||||||| ||||||| |||| || ||||||||||| ||||| ||||||||||||    
T  34019152 gctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaagggg 34019227  T

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Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 53901403 - 53901487
Alignment:
Q  29 ttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||| ||||||||||||||||||| |  | ||||||||||| ||||| ||| |||  ||||||||||||||||||||||    
T  53901403 ttagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcactttagcc 53901487  T

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Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 535789 - 535883
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||||||||  |||||| |||||||  |||||| | | |||||||||||| ||||| ||||||| ||| |||||||| ||||||||||    
T  535789 gctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 535883  T

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Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 5001275 - 5001197
Alignment:
Q  40 aaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||| ||||| ||||||||| ||||||||||||||  |||| |||| || ||| ||||||||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcctat 5001197  T

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Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 28262286 - 28262189
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    |||||| | ||||||||||||||||| |||||  ||| | || ||||||||| ||||  |||| ||||||| |||||||||||||||||||||||||||    
T  28262286 gctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtta-ggggggaaaagtgcactttagcctata 28262189  T

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Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 52276398 - 52276301
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||| | ||||||||||||||||| |||||  ||| | || ||||||||| ||||  |||| |||| || ||||||||||||||||||||||||||    
T  52276398 gctaaaacatagggggccaaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcctat 52276301  T

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Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 51470462 - 51470557
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||  | ||||||| ||||| ||||||||| |  | ||||||||| ||||| |||||| ||||||||| ||||||||||||||||    
T  51470462 gctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcactttagccta 51470557  T

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Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 52281554 - 52281650
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||| | ||||||||||||||||| |||||  ||| | || ||||||||| ||||  |||| |||| || |||||||||||||||||||||||||    
T  52281554 gctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagccta 52281650  T

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Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 53614902 - 53614810
Alignment:
Q  32 gggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataattta 124  Q
    |||||||||||||||||||||| ||  |||  | | ||||||| || ||||| ||||||||||| |||||| |||||||||||||| ||||||    
T  53614902 gggggccaaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagcctaaaattta 53614810  T

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Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 18442725 - 18442622
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta-aggggggaaaagtgcactttagcctata 119  Q
    |||||| | |||||||||||||||||||||||  ||| | || ||||||||| ||||  |||| |||||||  |||||| ||||||||||||||||| ||    
T  18442725 gctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagccttta 18442626  T
Q  120 attt 123  Q
    ||||    
T  18442625 attt 18442622  T

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Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 19487799 - 19487696
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta-aggggggaaaagtgcactttagcctata 119  Q
    |||||| | |||||||||||||||||||||||  ||| | || ||||||||| ||||  |||| |||||||  |||||| ||||||||||||||||| ||    
T  19487799 gctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactttagccttta 19487700  T
Q  120 attt 123  Q
    ||||    
T  19487699 attt 19487696  T

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Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 51347360 - 51347265
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||||||||||| |||||||||  ||||||| | |||  | |||||||||||| ||||| ||| ||||| |||| ||||||||||||| |||||    
T  51347360 taaatcttagggggtcaaaattgtcatttttgttcatagaggaccaaaattgcaactttttcaaacttaagagggggaaagtgcactttaacctat 51347265  T

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Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 52104569 - 52104484
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||| |||||||||| |||||||||||| |||||  |||||||| ||| ||||| |||||||  |||||||||||||| ||||    
T  52104569 taaatcttaggtggccaaaattatagtttttgtacatagga--ccaaaattacaactttttgaaagtta--gggggaaaagtgcatttta 52104484  T

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Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 11671350 - 11671443
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||| ||||||| ||||  |||||||||| || ||||| ||| |||||||||| ||||| ||||||| || || |||||||||||||||||||    
T  11671350 taaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttgaaagtta-ggcggaaaaagtgcactttagccta 11671443  T

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Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 54987014 - 54987119
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||| ||| ||||||| |||||||| ||| |||| | | ||||| |||| ||||| ||| |||  ||||||||||||||||||| |||  ||    
T  54987014 gctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaactttttgaaactta--gggggaaaagtgcactttaaccttaaa 54987111  T
Q  121 tttaataa 128  Q
    ||||||||    
T  54987112 tttaataa 54987119  T

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Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 18456070 - 18456165
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta-aggggggaaaagtgcactttagcc 115  Q
    |||||| | ||||||||||||||||| |||||  ||| | || ||||||||| ||||  |||| |||||||  |||||||||||||||||||||||    
T  18456070 gctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcactttagcc 18456165  T

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Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 31645067 - 31645000
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaag 88  Q
    ||||||||||||| ||  |||||||||||||||| ||||||| ||||||||||| || ||||| ||||    
T  31645067 gctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagtttttgaaag 31645000  T

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Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 52839131 - 52839036
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||| |||| |||  |||||||| ||||| ||||||||  || ||||||| |||||||||  ||||||  ||||||||| |||||||||||||    
T  52839131 gctaaattttagaggggtaaaattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcactttagcct 52839036  T

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Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 23769947 - 23769855
Alignment:
Q  24 aaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||| | |||||||||||||||| || |||  |   |||||||||| || || ||||||||||| |||||||||||||| ||||||    
T  23769947 aaatcttaggggtc-aaaattgtagtttttgcacatagaggattaaaattgcaacttgttgaaagttaagggtggaaaagtgcacttcagccta 23769855  T

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Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 11670477 - 11670397
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaa 102  Q
    ||||||| || ||| |||||||| |||||||| |||||||| | | |||||||||||||||| ||| ||||| ||| ||||    
T  11670477 ctaaatcataagggaccaaaattatagtttttatacttaggggactaaaattgcaaatttttgaaaattaagcgggaaaaa 11670397  T

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Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 6250585 - 6250672
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactt 110  Q
    |||||||||| |||| |||||| ||| |||||||| |||| | |||||||  ||| ||||||||| ||||  |||| |||||||||||    
T  6250585 taaatcttagagggctaaaattttaggttttgtacataggggaccaaaatcacaattttttaaaacttaaaagggggaaagtgcactt 6250672  T

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Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 31039257 - 31039296
Alignment:
Q  79 tttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  31039257 tttttaaaacttaaggggtgaaaagtgcactttagcctat 31039296  T

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Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 49398220 - 49398130
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||| | ||||||||||||| ||||||| | ||| |  |||||||   || ||||||||| |||| |||||||||||||||||||    
T  49398220 gctaaatcttaagaggccaaaattgtaatttttgttcatagaacaccaaaataataattttttaaaacttaa-gggggaaaagtgcacttta 49398130  T

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Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 53616023 - 53616114
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||| |||| ||||||  |||||||||||||||||| || |     |||||| ||| | ||||||||||||||| ||||||||||||||||    
T  53616023 gctaattcttggggggctgaaattgtagtttttgtacataaggaattaaaattacaagtgtttaaaagttaagggaggaaaagtgcacttta 53616114  T

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Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 25336411 - 25336358
Alignment:
Q  62 gaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||||||||  |||| ||| |||||||| |||||||||| |||||||    
T  25336411 gaggccaaaattgcaacattttgaaatttaaggggcgaaaagtgcagtttagcc 25336358  T

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Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 50296262 - 50296201
Alignment:
Q  59 taggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||| |||||||||||||| ||||  ||| ||||||||  ||||||||| ||||||||||||    
T  50296262 tagggggccaaaattgcaacttttgcaaacttaaggggcaaaaagtgcattttagcctataa 50296201  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 6171251 - 6171314
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaa 87  Q
    |||||||||| ||| ||||||| |||||||||||| |||| |||||||||  ||| |||||||||    
T  6171251 taaatcttagagggtcaaaattatagtttttgtacatagg-ggccaaaatcacaattttttaaaa 6171314  T

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Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 22775826 - 22775783
Alignment:
Q  64 ggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcac 108  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||    
T  22775826 ggccaaaattgcaactttttgaaagtt-aggggggaaaagtgcac 22775783  T

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Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 39843098 - 39843054
Alignment:
Q  68 aaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    |||||||||| ||||| ||| ||||||||| ||||||||||||||    
T  39843098 aaaattgcaactttttcaaacttaagggggaaaaagtgcacttta 39843054  T

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Target: scaffold0302 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 17558 - 17468
Alignment:
Q  27 tcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  17558 tcttggggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagccta 17468  T

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Target: scaffold0302; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 18783 - 18877
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||| ||| |||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| | ||| |||||||||||||||||    
T  18783 gctaaattttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagcc 18877  T

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Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 18371518 - 18371424
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||||| | |||||||||||||||||||||    
T  18371518 gctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 18371424  T

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Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 17782560 - 17782662
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||    
T  17782560 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctataa 17782659  T
Q  121 ttt 123  Q
    |||    
T  17782660 ttt 17782662  T

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Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 22629580 - 22629480
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaag---gggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| |||||   ||||||||| ||||||||||||||    
T  22629580 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgcactttagccta 22629481  T
Q  118 t 118  Q
    |    
T  22629480 t 22629480  T

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Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 22630463 - 22630555
Alignment:
Q  25 aatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||| ||||||| || ||||||||||||||||||||||    
T  22630463 aatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttagccta 22630555  T

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Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 31659717 - 31659622
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaagggggg-aaaagtgcactttagcc 115  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||| || ||||| ||||||| |||||| |||||||||||||||||    
T  31659717 gctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttagcc 31659622  T

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Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 3227601 - 3227697
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||  | ||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  3227601 gctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagccta 3227697  T

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Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 42886293 - 42886389
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||| |||||||||||||||||| ||||| || ||||||||||||||||| ||||||| | || ||||||||||||||| ||||    
T  42886293 gctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcactttaaccta 42886389  T

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Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 18372464 - 18372544
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| || |||||||||||    
T  18372464 gctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaatt-aggggggaaaa 18372544  T

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Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 31949809 - 31949914
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||||||  | ||||||| ||||| ||| ||||| |||||||||||||| ||||| ||||||| |||||||| ||||||||||||||||| |    
T  31949809 gctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcactttagcctatta 31949908  T
Q  121 tttaat 126  Q
    ||||||    
T  31949909 tttaat 31949914  T

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Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 7501859 - 7501955
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||| |||||| |||||||||||||| |||||  |||||||| |||||||||||||| ||||| |||||||  ||||||||||||||||||||||||    
T  7501859 gctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 7501955  T

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Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 31949416 - 31949320
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| |||||||||||||| ||||| ||| ||| || ||||||||||||||||||||||    
T  31949416 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagccta 31949320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 11658457 - 11658367
Alignment:
Q  37 ccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataatttaataa 128  Q
    ||||||||||||||||||||| |||| ||| |||||||||  ||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  11658457 ccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcctat-atttaataa 11658367  T

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Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 127429 - 127335
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||||| ||| |||| ||||| ||||||||| | |||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  127429 gctaaatcttagggggctaaa-ttgtggttttggtacttaggggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagccta 127335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 17781755 - 17781663
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttag 113  Q
    ||||||||||||||||   ||||||| ||||| ||||||||| || ||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  17781755 gctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

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Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 128612 - 128699
Alignment:
Q  25 aatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    |||||||||||| | ||||||| ||||| ||||||||| || ||||||||||||||||| ||||||| || |||||||||||||||||    
T  128612 aatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T

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Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 7500548 - 7500454
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||||||||||||| |||| | |||||||  |  ||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  7500548 gctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaag-ggggaaaagtgcactttagcct 7500454  T

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Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 47369875 - 47369780
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||| |||||||||| ||||| ||||||| |||   ||||||||| ||||||||    
T  47369875 gctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcattttagcct 47369780  T

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Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 14999162 - 14999249
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactt 110  Q
    |||||||||||||| ||||||||||||||||||||| ||||| || ||||||||||| |||| ||||  | |||||||||||||||||||    
T  14999162 gctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaagttttgaaaa--ttaggggggaaaagtgcactt 14999249  T

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Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 21505508 - 21505413
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||||||| |||| |||||||||||||||||||  | || ||||||||| |||| ||||| |||||||  |||||||||||||||||||||||||    
T  21505508 gctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggggaaaagtgcactttagcctat 21505413  T

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Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 47525374 - 47525468
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||| | ||||||| |||||  |||||||| ||| |||||||||| ||||| |||||||  ||||||||||||||||||||||    
T  47525374 gctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 47525468  T

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Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 11662558 - 11662649
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||| |||| ||||||||||||| |||||||||||| |||   || |||||||||| ||||| |||||||||||||||||| |||||||||    
T  11662558 gctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

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Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 3227201 - 3227109
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagc 114  Q
    ||||||||||| |||| | ||||||| ||||| ||||||||| |||||||||||||| ||||| ||| || ||||||| |||||||||||||||    
T  3227201 gctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaatt-agggggggaaagtgcactttagc 3227109  T

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Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 20163585 - 20163658
Alignment:
Q  43 ttgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||| ||||  ||||||||||||| ||||| ||||||| ||| ||| ||||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcct 20163658  T

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Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 30439365 - 30439460
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||| | |||||||||||||||| || |||||   |||||| | || ||||| |||||||||||| | ||||||||||||||||||    
T  30439365 gctaaatcttaggggactaaaattgtagtttttgaacataggaaatcaaaatcgtaactttttgaaagttaaggggag-aaagtgcactttagccta 30439460  T

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Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 34174010 - 34174085
Alignment:
Q  41 aattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||| ||||| ||||||||| ||||||||||||||  |||| |||| || |||||||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagata-ggggggaaaagtgcactttagccta 34174085  T

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Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  41 aattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcac 108  Q
    |||||| ||||| ||||||||| |||||||||||||| ||||| |||||||  |||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

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Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 48934910 - 48935004
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||| |||| ||||  ||||||| ||||||||||||||||  || ||||||| ||| ||||| ||||||| ||| |||||| ||||||||||||    
T  48934910 gctaattcttgggggatcaaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagcc 48935004  T

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Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 31661018 - 31661111
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||| ||||||| | |||||| |||||||||||| ||   || ||||||||||||||||| |||||||  | ||| |||||||||||||||||    
T  31661018 taaattttaggggactaaaattatagtttttgtacgtaaagggtcaaaattgcaaatttttgaaagttagagaggggaaagtgcactttagcct 31661111  T

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Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 769497 - 769413
Alignment:
Q  31 agggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||| ||||||||| || ||||||||||||||| | ||||||||||| ||||| ||| |||  || |||||| ||||||||||||    
T  769497 agggagccaaaattataatttttgtacttaggatgtcaaaattgcaagtttttgaaaattacaggtggaaaattgcactttagcc 769413  T

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Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 34352795 - 34352888
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||| ||||||||||| |||||| |||||||| | | ||||||| | || ||||| ||| |||  || | ||||||||||||||||||    
T  34352795 taaatcttagagggccaaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttagcct 34352888  T

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Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 5111497 - 5111441
Alignment:
Q  60 aggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||  ||| ||||| ||| |||||||| |||||||||||||||||||    
T  5111497 aggaggccaaaatcacaagtttttgaaacttaaggggtgaaaagtgcactttagcct 5111441  T

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Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 46482689 - 46482594
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||||||||||   |||||| |||||||||||| |||| || |||| || ||||||||| ||| ||| | || ||||| |||||||||| ||||    
T  46482689 taaatcttaggggattaaaattatagtttttgtacatagggggtcaaatttacaaatttttgaaaattaggaggagaaaaatgcactttagtctat 46482594  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 9822334 - 9822371
Alignment:
Q  79 tttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  9822334 tttttaaaacttaaggggtgaaaagtgcactttagcct 9822371  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 10724259 - 10724296
Alignment:
Q  79 tttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  10724259 tttttaaaacttaaggggtgaaaagtgcactttagcct 10724296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 15681644 - 15681587
Alignment:
Q  66 ccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataattt 123  Q
    ||||||| |||| ||||||||| |||| ||| ||||||| ||||||||||| ||||||    
T  15681644 ccaaaatcgcaactttttaaaacttaatgggtgaaaagttcactttagcctttaattt 15681587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 42271552 - 42271637
Alignment:
Q  31 agggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||||||  ||||| |   |||| ||| ||||||||||  ||||||||  || |||| |||||||||||||||||||    
T  42271552 agggggccaaaattgtcattttttttaatagggggcaaaaattgcaacattttaaaacatagggggcgaaaagtgcactttagcct 42271637  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 21810109 - 21810153
Alignment:
Q  80 ttttaaaagttaaggggggaaaagtgcactttagcctataattta 124  Q
    |||||||| ||| |||| ||||||||||||||||||||| |||||    
T  21810109 ttttaaaacttagggggcgaaaagtgcactttagcctatgattta 21810153  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 32253441 - 32253501
Alignment:
Q  57 cttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||| || ||||||||||| |||||  || ||||||| ||||||||| |||||||||||    
T  32253441 cttaggtggtcaaaattgcaactttttgcaacttaagggtggaaaagtgtactttagccta 32253501  T

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Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 10784687 - 10784589
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggg-gggaaaagtgcactttagcctat 118  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||  |||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  10784687 gctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactttagcctat 10784589  T

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Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 1829610 - 1829701
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||| ||||  ||||||||||||||    
T  1829610 gctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcacttta 1829701  T

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Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 7316301 - 7316398
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||||||| |||||||||||||| ||||   || ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  7316301 gctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctat 7316398  T

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Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 27437922 - 27437825
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||||||||||||| |||||||||||||||| |   |||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||    
T  27437922 gctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcctat 27437825  T

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Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 8659359 - 8659263
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||  ||||||||||||||||||||||||    
T  8659359 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 8659263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 8821967 - 8821871
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||  ||||||||||||||||||||||||    
T  8821967 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 8821871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 16704504 - 16704600
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||  ||  ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  16704504 gctaaatcttaaaggatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagccta 16704600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 8822800 - 8822903
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| || ||||||||||| ||||| |||||||| | |||||||||||||||||||| ||||    
T  8822800 gctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcactttagccaataa 8822899  T
Q  121 ttta 124  Q
    ||||    
T  8822900 ttta 8822903  T

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Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 14822453 - 14822358
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||||||||||||||||| | |||||| | |||||||||||||| ||||| ||| |||||||| |||||||||||| |||||||    
T  14822453 ctaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagccta 14822358  T

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Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 14823583 - 14823680
Alignment:
Q  22 ctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggg-gaaaagtgcactttagcctat 118  Q
    |||||||||||||||||||||||||||||| |||||||| | ||| |||||||||| ||||| ||| |||||||||  ||||||||||||||||||||    
T  14823583 ctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcctat 14823680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 7314973 - 7314880
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||||||||||| ||||||||| |||||  |||||||| |||||||||||||| ||||| |||||||  ||||||||||||||||||||||    
T  7314973 gctaaatcttagggggtcaaaattgttgttttgatacttagg-ggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 7314880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 8660211 - 8660305
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| || ||||||||||| ||||| ||||||| | ||||||||||||||||||||||    
T  8660211 gctaaatcttaggggggctaaattgtggttttggtacttagg-ggtcaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcct 8660305  T

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Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 27322075 - 27322173
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    ||||| ||||||||||  |||||||| ||||| ||||||||| ||||||||||||||  |||| |||| | |||||||||||||||||||||||||||||    
T  27322075 gctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcctataa 27322173  T

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Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 34834586 - 34834685
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||||||||||||| | ||||||| |||||  ||||||||||  ||||||||||| ||||| ||||||| || ||||||||||||||||| |||||||    
T  34834586 gctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttaacctataa 34834685  T

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Target: chr6; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 10785920 - 10786000
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaa 102  Q
    ||||||||||| ||||  |||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||||||||||    
T  10785920 gctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagtt-aggggggaaaa 10786000  T

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Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 3721706 - 3721611
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||| |||| | ||||| | ||||| ||||||||| || ||||||||||| ||||| |||||||  |||||||||||||||||||||||    
T  3721706 gctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 3721611  T

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Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 6842308 - 6842386
Alignment:
Q  39 aaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| || |||| |||||||||||||| ||||| ||| |||  ||||||||||||||||||||||||    
T  6842308 aaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagccta 6842386  T

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Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 26575063 - 26575131
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta 91  Q
    |||||||||||||||||||||||||||||||||||||| | ||  |||||||||| ||||| |||||||    
T  26575063 taaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagtta 26575131  T

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Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 27447963 - 27448017
Alignment:
Q  64 ggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  27447963 ggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctat 27448017  T

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Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 3722533 - 3722610
Alignment:
Q  40 aaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||| ||||| ||||||||  || ||||||||||| ||||| ||||||| || ||||||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagccta 3722610  T

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Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 29473158 - 29473082
Alignment:
Q  34 gggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactt 110  Q
    |||||||||||||  ||||||| | ||||   |||||||||||| ||||||||| ||||||||||||||||||||||    
T  29473158 gggccaaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

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Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 1828821 - 1828738
Alignment:
Q  33 ggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||| ||||||| || |||||| |||||  | ||||||||||||||||||||||| |||| |||| |||| |||||||||||||    
T  1828821 ggggacaaaattataatttttgaacttaaaaagccaaaattgcaaatttttaaaaattaaaggggaaaaaatgcactttagcct 1828738  T

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Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 3333033 - 3333128
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||| |||| |||  ||||||||||||||||||| |||| ||||||||| |||| ||||| ||| |||   ||||||||||||| ||||||||    
T  3333033 gctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaatttagcct 3333128  T

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Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 5658850 - 5658759
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcacttta 112  Q
    ||||||||||| |||  |||||||||||||||||||| ||||   | ||||||  || ||||||||| |||||||||||||| |||||||||    
T  5658850 gctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataactttttaaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 6840284 - 6840192
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||| ||| ||||||| ||||||||||| ||| | ||||||||| |||| ||||| ||| |||||||||  ||||||||||| ||||||    
T  6840284 taaatcttagagggtcaaaattatagtttttgtatttaaggggccaaaatcgcaactttttgaaacttaaggggg--aaagtgcacttcagccta 6840192  T

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Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 12382720 - 12382811
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagc 114  Q
    |||||||| ||||  ||||||| |||||||  |||||||| || ||||||| ||||||||||||| |||  || ||||||||||||||||||    
T  12382720 taaatctttggggatcaaaattatagttttaatacttagggggtcaaaattacaaatttttaaaaattagaggtggaaaagtgcactttagc 12382811  T

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Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 16703659 - 16703570
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||| ||||||||| |||||||||||||||||| ||| | |  ||||||||||| ||||| |||| ||  ||||||||||||||||||||||    
T  16703659 taaattttagggggctaaaattgtagtttttgtatttatg-gatcaaaattgcaagtttttgaaagata--gggggaaaagtgcactttagcc 16703570  T

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Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 34830996 - 34830927
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtt 90  Q
    |||||||||||||||| | ||||||| ||||| ||||||||| |||||||  ||||||||||| ||||||    
T  34830996 gctaaatcttaggggggctaaattgtggttttggtacttagggggccaaatatgcaaatttttgaaagtt 34830927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 16415586 - 16415636
Alignment:
Q  67 caaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||| |||| ||||||||| |||||||| ||||||||||||||||||||    
T  16415586 caaaatcgcaactttttaaaatttaaggggtgaaaagtgcactttagccta 16415636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 17496890 - 17496791
Alignment:
Q  23 taaatcttaggggg-ccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaag----gggggaaaagtgcactttagccta 117  Q
    |||||||||||||| ||||||||| |||||||||||||||  ||  ||||||| || ||||| ||||||| |    ||||||||| ||||||||||||||    
T  17496890 taaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaattgtaagtttttgaaagttagggggagggggaaaaatgcactttagccta 17496791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 27318389 - 27318312
Alignment:
Q  40 aaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||| ||||| ||||||||| ||||||||||||||  |||| |||| | |||||| ||| ||||||||||||||||    
T  27318389 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-agggggaaaaggtgcactttagcctat 27318312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 30495704 - 30495806
Alignment:
Q  21 gctaaatcttag-ggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    |||||||||||| ||||||||||||||  ||||||||| |||| |   ||||| |||| ||||| |||||||  |||| ||||||||||||||||| | |    
T  30495704 gctaaatcttagaggggccaaaattgttatttttgtacataggggattaaaatcgcaactttttgaaagtta--ggggaaaaagtgcactttagccaaaa 30495801  T
Q  120 attta 124  Q
    |||||    
T  30495802 attta 30495806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 26574712 - 26574617
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||| |||  |||||| |||||||||||||||||  |  ||||||||||| ||||| |||||||  || || ||| ||||||||||||||    
T  26574712 gctaaatcttaagggatcaaaat-gtagtttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattgcactttagccta 26574617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 18749153 - 18749094
Alignment:
Q  59 taggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||| ||||||||||||||  ||||||||  ||||||| |||||||||| ||||||||||    
T  18749153 tagggggccaaaattgcaacattttaaaacataaggggcgaaaagtgcagtttagcctat 18749094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 26717137 - 26717183
Alignment:
Q  67 caaaattgcaaatttttaaaagttaaggggggaaaagtgcactttag 113  Q
    ||||||||||| ||| | ||| |||||||||||||||||||||||||    
T  26717137 caaaattgcaagtttctgaaacttaaggggggaaaagtgcactttag 26717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 12350891 - 12350823
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtt 90  Q
    ||||||||||||||||  ||||||||||||||| ||| |||| || ||||||||||| ||| | ||||||    
T  12350891 gctaaatcttagggggttaaaattgtagtttttatacatagg-ggtcaaaattgcaagtttattaaagtt 12350823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 34834172 - 34834229
Alignment:
Q  59 taggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||| |||||| ||||  ||||||||  ||||||| |||||||||||||||||||    
T  34834172 taggaggtcaaaatcgcaatattttaaaacataaggggcgaaaagtgcactttagcct 34834229  T

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Target: scaffold0019 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 61466 - 61559
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagc 114  Q
    |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||| ||| ||||||| ||||||||||||||||||    
T  61466 gctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcactttagc 61559  T

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Target: scaffold0019; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 60184 - 60090
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||| ||||||| |||||||||||||||| ||| |||| || ||||||||||| |||||||||||||  || |||||||||||||||||||    
T  60184 gctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcactttagcc 60090  T

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Target: scaffold0003 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 49440 - 49537
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||||||||||||| |||||||||||||||| |   |||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||    
T  49440 gctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcctat 49537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 39395 - 39341
Alignment:
Q  64 ggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    ||||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  39395 ggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctat 39341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 5445 - 5541
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||| |||| ||||||||||||||||||||||| | || ||||||||||| ||||| ||| ||| |||||||||||||||||||||||||    
T  5445 gctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagccta 5541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 4536 - 4440
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||| ||||||||  ||||||||| |||||||||||| | ||| ||||||| || ||||| ||| ||| ||||| ||| |||||||||||||||    
T  4536 gctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcactttagccta 4440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 327 - 233
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||| ||||||||| |||||||| |||||||||||| |||| | |||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  327 gctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagcc 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 985 - 1058
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaagg 94  Q
    ||||| |||| ||||||||||||| |||||||||||| || | | |||||||||||| ||||||||||||||||    
T  985 gctaattcttggggggccaaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagttaagg 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 19580 - 19486
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||  |||||||||||||||| |||||||| ||||||||||||||  |||| ||| |||||||||||||| ||||||||||||||    
T  19580 taaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagccta 19486  T

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Target: scaffold0112 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 37241 - 37148
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaat-ttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||||| ||||||||| ||  ||||||||||||||||||||||    
T  37241 gctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaagata--gggggaaaagtgcactttagcc 37148  T

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Target: scaffold0045 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 49109 - 49185
Alignment:
Q  39 aaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagcc 49185  T

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Target: scaffold1303 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 1533 - 1436
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctat 118  Q
    |||||||||||||||| ||||||| |||||||| ||| |||| || ||||||||||| ||||| |||||||  ||||||||||| |||||||||||||    
T  1533 gctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacactttagcctat 1436  T

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Target: scaffold0632 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 3315 - 3410
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||||| |||||||| |||||||||||| || | || |||||||| || ||||| |||| ||||||||||||||||||||||||||||    
T  3315 gctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaag-taaggggggaaaagtgcactttagccta 3410  T

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Target: scaffold0586 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 6437 - 6341
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||| ||||| | || ||||| ||| ||||||| |||||||||||||||| ||||    
T  6437 gctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcactttaaccta 6341  T

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Target: scaffold0586; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 9034 - 9135
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |||||  ||| ||||| ||| |||||| || |||||||||||||||||||| |    
T  9034 gctaaatcttagggg-ccaaaattgtagtttttgtacataggaggcaaaaatcacaactttttgaaa-ttaaggaggaaaaagtgcactttagcctatta 9131  T
Q  121 ttta 124  Q
    ||||    
T  9132 ttta 9135  T

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Target: scaffold0321 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 18816 - 18730
Alignment:
Q  27 tcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttag 113  Q
    ||||||| || |||||||||||||||||| | ||||||| |||||| |||| ||||||||||||||| ||| |||||||||||||||    
T  18816 tcttaggaggtcaaaattgtagtttttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcactttag 18730  T

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Target: scaffold0093 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 2472 - 2564
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaa-atttttaaaagttaaggggggaaaagtgcactttagc 114  Q
    |||||||| |||||||||||||| || ||||||||||||||| || |||||||||||  ||||| |||||||  |||||||||||||||||||||    
T  2472 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 2564  T

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Target: scaffold0093; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 7095 - 7187
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaa-atttttaaaagttaaggggggaaaagtgcactttagc 114  Q
    |||||||| |||||||||||||| || ||||||||||||||| || |||||||||||  ||||| |||||||  |||||||||||||||||||||    
T  7095 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 7187  T

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Target: scaffold0369 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 13283 - 13192
Alignment:
Q  23 taaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    ||||||||||||| | |||||||||||||| |||| ||||||| ||||||  ||| ||||| |||||||  |||||||||||||||||||||||    
T  13283 taaatcttaggggacaaaaattgtagttttcgtacataggaggtcaaaatcacaactttttcaaagtta--gggggaaaagtgcactttagcct 13192  T

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Target: scaffold0049 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 7422 - 7517
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcct 116  Q
    |||||||||||||||| |||||||||||||| ||||| |||| || |||||| | || ||||| ||| |||  |||||| ||||||||||||||||    
T  7422 gctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggggacaagtgcactttagcct 7517  T

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Target: scaffold0049; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 7631 - 7538
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||||| ||||| || ||||||||||||||||| | |||| || |||| || ||| ||||| ||| |||  ||||| ||||||||||||||||    
T  7631 gctaaatcgtagggagctaaaattgtagtttttgttcatagggggtcaaatttacaactttttcaaacttataggggg-aaagtgcactttagcc 7538  T

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Target: scaffold0227 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 126 - 220
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcc 115  Q
    |||||| | ||||||||||||||||| |||||  ||| | || ||||||||| ||||  |||| ||||||| |||||||||||||||||||||||    
T  126 gctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 220  T

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Target: scaffold0059 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 4745 - 4829
Alignment:
Q  29 ttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagc 114  Q
    |||| ||| |||||||||||||| |||| ||||| |||||||||||||  |||||||||||| |||| || |||||||||||||||    
T  4745 ttagagggtcaaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt-agggagggaaagtgcactttagc 4829  T

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Target: scaffold0059; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 3769 - 3699
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagtta 91  Q
    ||||||||||||||| | |||||| |||||| | |||| ||| |||||||||||||| ||||| |||||||    
T  3769 gctaaatcttaggggactaaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagtta 3699  T

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Target: scaffold0186 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 23173 - 23072
Alignment:
Q  21 gctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctataa 120  Q
    |||||| ||||||||  ||| ||||| ||||| ||||||||  || ||||||||||| ||||| |||||||  |||||||||||||||||||||| | ||    
T  23173 gctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagccaaaaa 23076  T
Q  121 ttta 124  Q
    ||||    
T  23075 ttta 23072  T

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Target: scaffold0186; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 23941 - 23993
Alignment:
Q  65 gccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    ||||||||||||| ||||| ||||||| || |  |||||||||||||||||||    
T  23941 gccaaaattgcaagtttttgaaagttagggagaaaaaagtgcactttagccta 23993  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 454985 - 454927
Alignment:
Q  59 taggaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagccta 117  Q
    |||| |||||||||  ||| ||||||||| |||| ||| ||||||||||||||||||||    
T  454985 tagggggccaaaatcacaactttttaaaacttaatgggtgaaaagtgcactttagccta 454927  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 35186 - 35129
Alignment:
Q  62 gaggccaaaattgcaaatttttaaaagttaaggggggaaaagtgcactttagcctata 119  Q
    |||||||||||||||| |||||||||||||||| |  |||| ||||||| | ||||||    
T  35186 gaggccaaaattgcaattttttaaaagttaaggtgtaaaaaatgcacttaaacctata 35129  T

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