View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11009_high_31 (Length: 210)

Name: NF11009_high_31
Description: NF11009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11009_high_31
NF11009_high_31
[»] chr5 (32 HSPs)
chr5 (94-195)||(2152123-2152226)
chr5 (1-77)||(16650880-16650956)
chr5 (1-77)||(22940647-22940723)
chr5 (1-77)||(25523069-25523145)
chr5 (1-77)||(19752912-19752987)
chr5 (1-77)||(28538676-28538752)
chr5 (1-77)||(33160311-33160387)
chr5 (1-77)||(40255697-40255773)
chr5 (1-77)||(25524152-25524229)
chr5 (1-77)||(1796054-1796130)
chr5 (1-77)||(36486513-36486589)
chr5 (1-74)||(20216788-20216861)
chr5 (1-74)||(24332916-24332989)
chr5 (1-53)||(2685768-2685820)
chr5 (1-77)||(18486927-18487003)
chr5 (1-77)||(25056406-25056482)
chr5 (1-74)||(28539845-28539917)
chr5 (1-77)||(18154494-18154569)
chr5 (1-77)||(20214196-20214271)
chr5 (2-77)||(5778862-5778937)
chr5 (1-75)||(36485302-36485376)
chr5 (1-77)||(19754155-19754232)
chr5 (1-69)||(1015492-1015560)
chr5 (2-77)||(5730441-5730517)
chr5 (1-77)||(18485138-18485214)
chr5 (1-77)||(33158098-33158174)
chr5 (1-35)||(5962597-5962631)
chr5 (1-74)||(42195137-42195208)
chr5 (1-53)||(1016888-1016940)
chr5 (1-49)||(2686426-2686474)
chr5 (2-77)||(5777901-5777974)
chr5 (1-77)||(25055412-25055488)
[»] scaffold0302 (2 HSPs)
scaffold0302 (1-77)||(17470-17546)
scaffold0302 (1-77)||(18801-18877)
[»] chr2 (30 HSPs)
chr2 (1-77)||(7899907-7899983)
chr2 (1-77)||(36449778-36449854)
chr2 (1-77)||(18299373-18299449)
chr2 (1-77)||(23869560-23869635)
chr2 (1-77)||(38840518-38840594)
chr2 (1-77)||(18904367-18904443)
chr2 (1-77)||(22848191-22848267)
chr2 (2-74)||(36450947-36451018)
chr2 (1-77)||(41879237-41879313)
chr2 (11-77)||(11938823-11938889)
chr2 (1-77)||(18868924-18869000)
chr2 (1-77)||(38839242-38839318)
chr2 (1-77)||(24476869-24476943)
chr2 (1-74)||(26544152-26544224)
chr2 (1-77)||(13570582-13570658)
chr2 (1-77)||(18906012-18906088)
chr2 (2-77)||(1034495-1034570)
chr2 (1-77)||(11258836-11258912)
chr2 (1-77)||(802616-802691)
chr2 (1-77)||(22587979-22588054)
chr2 (1-74)||(7898694-7898767)
chr2 (1-74)||(8534586-8534658)
chr2 (1-74)||(13567975-13568048)
chr2 (1-77)||(18797246-18797323)
chr2 (1-77)||(41878092-41878170)
chr2 (1-76)||(13030293-13030365)
chr2 (1-77)||(16446154-16446230)
chr2 (1-76)||(18300749-18300822)
chr2 (1-45)||(810806-810850)
chr2 (1-45)||(32739655-32739699)
[»] chr6 (24 HSPs)
chr6 (1-77)||(16704522-16704598)
chr6 (1-77)||(10784592-10784669)
chr6 (1-77)||(14822360-14822436)
chr6 (2-77)||(8659265-8659340)
chr6 (2-77)||(8821873-8821948)
chr6 (1-74)||(1829628-1829701)
chr6 (1-74)||(5658759-5658832)
chr6 (20-77)||(7316338-7316395)
chr6 (1-77)||(14823600-14823677)
chr6 (1-77)||(6842308-6842384)
chr6 (2-77)||(8822819-8822894)
chr6 (1-76)||(12382736-12382811)
chr6 (1-72)||(29473082-29473153)
chr6 (28-77)||(27447965-27448014)
chr6 (1-77)||(7314880-7314955)
chr6 (1-77)||(27322093-27322168)
chr6 (1-77)||(27437828-27437904)
chr6 (10-77)||(3721612-3721679)
chr6 (2-77)||(3722533-3722608)
chr6 (2-77)||(8660230-8660304)
chr6 (6-77)||(26574619-26574690)
chr6 (1-77)||(3333051-3333127)
chr6 (1-49)||(10785938-10785986)
chr6 (2-74)||(34834605-34834677)
[»] chr4 (35 HSPs)
chr4 (1-77)||(1964466-1964542)
chr4 (1-75)||(19750600-19750673)
chr4 (1-75)||(19789133-19789206)
chr4 (1-77)||(1290223-1290299)
chr4 (1-77)||(49308052-49308127)
chr4 (1-77)||(52491632-52491708)
chr4 (2-77)||(10471414-10471489)
chr4 (1-67)||(21539096-21539162)
chr4 (1-74)||(8758862-8758935)
chr4 (1-74)||(12129626-12129699)
chr4 (1-77)||(1963196-1963272)
chr4 (1-77)||(17382993-17383068)
chr4 (1-77)||(17388236-17388311)
chr4 (1-77)||(31599789-31599865)
chr4 (1-77)||(31601010-31601086)
chr4 (2-77)||(48780248-48780323)
chr4 (1-74)||(35935558-35935631)
chr4 (1-77)||(1835127-1835203)
chr4 (1-77)||(8757675-8757750)
chr4 (2-77)||(25685848-25685923)
chr4 (1-77)||(1834119-1834195)
chr4 (1-77)||(26421647-26421722)
chr4 (2-77)||(10470546-10470621)
chr4 (2-77)||(25684934-25685009)
chr4 (1-77)||(10447006-10447083)
chr4 (2-77)||(13386014-13386090)
chr4 (1-77)||(13509384-13509459)
chr4 (2-77)||(5526152-5526226)
chr4 (1-74)||(8155741-8155813)
chr4 (2-77)||(48781072-48781146)
chr4 (1-74)||(1289100-1289173)
chr4 (1-74)||(55603556-55603628)
chr4 (1-77)||(10448285-10448361)
chr4 (2-77)||(13386558-13386634)
chr4 (1-49)||(37728590-37728638)
[»] chr1 (36 HSPs)
chr1 (1-77)||(11437224-11437300)
chr1 (1-77)||(39698563-39698639)
chr1 (1-77)||(24422800-24422876)
chr1 (1-77)||(36613929-36614005)
chr1 (1-77)||(51684366-51684442)
chr1 (1-77)||(52274968-52275044)
chr1 (1-74)||(24426100-24426173)
chr1 (1-74)||(39153141-39153214)
chr1 (1-77)||(7674528-7674602)
chr1 (1-77)||(11190385-11190461)
chr1 (1-77)||(14999285-14999360)
chr1 (1-77)||(23980491-23980567)
chr1 (1-77)||(35067027-35067103)
chr1 (1-77)||(35594217-35594292)
chr1 (1-77)||(45148581-45148656)
chr1 (1-77)||(45157234-45157309)
chr1 (2-77)||(52827347-52827422)
chr1 (4-77)||(39222501-39222575)
chr1 (4-77)||(14999983-15000056)
chr1 (1-74)||(39151934-39152007)
chr1 (1-74)||(43378738-43378810)
chr1 (1-74)||(45149996-45150068)
chr1 (4-77)||(50681632-50681705)
chr1 (1-77)||(11436042-11436118)
chr1 (1-77)||(39699792-39699867)
chr1 (2-74)||(52828096-52828168)
chr1 (1-74)||(43058789-43058861)
chr1 (1-42)||(44411991-44412032)
chr1 (1-74)||(45156052-45156125)
chr1 (1-77)||(36612853-36612928)
chr1 (1-77)||(51685790-51685866)
chr1 (2-77)||(41364829-41364903)
chr1 (1-54)||(40384748-40384801)
chr1 (1-77)||(12390006-12390082)
chr1 (1-77)||(33088642-33088718)
chr1 (1-77)||(44404442-44404518)
[»] scaffold0019 (2 HSPs)
scaffold0019 (1-76)||(61484-61559)
scaffold0019 (1-77)||(60090-60166)
[»] chr8 (35 HSPs)
chr8 (3-74)||(29968364-29968434)
chr8 (1-77)||(30335639-30335715)
chr8 (1-75)||(43661267-43661341)
chr8 (1-77)||(5513982-5514057)
chr8 (1-77)||(10007788-10007864)
chr8 (1-77)||(22221389-22221465)
chr8 (1-77)||(22227731-22227807)
chr8 (2-77)||(1823552-1823627)
chr8 (1-72)||(1824103-1824174)
chr8 (2-77)||(1857997-1858072)
chr8 (1-72)||(1858548-1858619)
chr8 (1-74)||(8389714-8389787)
chr8 (1-74)||(11287779-11287852)
chr8 (12-77)||(12353396-12353460)
chr8 (1-77)||(12351921-12351997)
chr8 (1-68)||(18970920-18970986)
chr8 (1-68)||(18978029-18978095)
chr8 (1-76)||(18979145-18979220)
chr8 (1-74)||(40471172-40471244)
chr8 (1-77)||(10006344-10006420)
chr8 (1-77)||(42982682-42982758)
chr8 (1-77)||(43661848-43661924)
chr8 (1-77)||(45114541-45114617)
chr8 (11-77)||(23170034-23170098)
chr8 (1-74)||(11282011-11282084)
chr8 (1-74)||(24361218-24361290)
chr8 (20-77)||(24483143-24483200)
chr8 (1-77)||(22220388-22220464)
chr8 (1-77)||(24122883-24122958)
chr8 (1-77)||(30336526-30336602)
chr8 (1-77)||(8388464-8388538)
chr8 (1-77)||(32207350-32207424)
chr8 (28-77)||(36249552-36249601)
chr8 (1-77)||(5514295-5514370)
chr8 (21-77)||(11456638-11456694)
[»] scaffold0320 (1 HSPs)
scaffold0320 (1-77)||(19488-19564)
[»] scaffold0294 (2 HSPs)
scaffold0294 (1-77)||(5463-5539)
scaffold0294 (1-77)||(4442-4518)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-77)||(49109-49185)
[»] chr3 (43 HSPs)
chr3 (1-77)||(7758402-7758478)
chr3 (1-77)||(19984849-19984925)
chr3 (1-77)||(29931226-29931302)
chr3 (1-77)||(29980380-29980456)
chr3 (1-77)||(51038815-51038891)
chr3 (1-77)||(54539755-54539831)
chr3 (1-77)||(54540815-54540891)
chr3 (1-76)||(8456479-8456553)
chr3 (1-74)||(7267647-7267719)
chr3 (1-77)||(22776837-22776913)
chr3 (1-77)||(29932724-29932799)
chr3 (1-77)||(29981878-29981953)
chr3 (2-77)||(51469972-51470047)
chr3 (1-77)||(12700175-12700249)
chr3 (1-74)||(23770432-23770505)
chr3 (1-77)||(535807-535883)
chr3 (1-77)||(46719941-46720017)
chr3 (1-77)||(55192020-55192095)
chr3 (19-77)||(47615591-47615649)
chr3 (3-77)||(49216247-49216321)
chr3 (1-73)||(24516464-24516536)
chr3 (2-74)||(47610606-47610678)
chr3 (1-77)||(53614819-53614895)
chr3 (2-77)||(5001200-5001275)
chr3 (1-68)||(6170281-6170348)
chr3 (1-77)||(19986095-19986173)
chr3 (2-77)||(47609697-47609772)
chr3 (1-74)||(7268852-7268924)
chr3 (1-77)||(12703525-12703600)
chr3 (1-77)||(23769857-23769933)
chr3 (1-45)||(31645005-31645049)
chr3 (1-77)||(46721245-46721321)
chr3 (1-77)||(47614185-47614261)
chr3 (2-74)||(53616042-53616114)
chr3 (1-68)||(6249618-6249685)
chr3 (2-77)||(51470481-51470555)
chr3 (1-55)||(11670406-11670460)
chr3 (1-77)||(534499-534575)
chr3 (1-77)||(5029708-5029783)
chr3 (1-77)||(8875906-8875982)
chr3 (1-57)||(34019170-34019226)
chr3 (1-77)||(51037536-51037611)
chr3 (1-77)||(52840629-52840705)
[»] scaffold2034 (2 HSPs)
scaffold2034 (1-77)||(233-309)
scaffold2034 (1-56)||(1003-1058)
[»] chr7 (26 HSPs)
chr7 (1-77)||(18371424-18371500)
chr7 (1-77)||(22630477-22630553)
chr7 (1-77)||(34352811-34352887)
chr7 (2-77)||(127337-127411)
chr7 (2-77)||(3227620-3227695)
chr7 (2-77)||(31949322-31949397)
chr7 (1-77)||(31659622-31659699)
chr7 (1-77)||(11658379-11658455)
chr7 (1-53)||(18372482-18372534)
chr7 (5-77)||(20163585-20163657)
chr7 (2-77)||(17782579-17782654)
chr7 (2-76)||(3227109-3227182)
chr7 (2-75)||(17781663-17781736)
chr7 (1-77)||(22629483-22629562)
chr7 (1-77)||(7500455-7500530)
chr7 (1-77)||(7501877-7501953)
chr7 (1-77)||(48934928-48935004)
chr7 (2-77)||(31949828-31949903)
chr7 (1-77)||(769413-769489)
chr7 (1-72)||(14999180-14999249)
chr7 (3-70)||(47524532-47524599)
chr7 (2-77)||(47525393-47525468)
chr7 (3-77)||(34174010-34174083)
chr7 (1-74)||(11662576-11662649)
chr7 (1-74)||(42886311-42886384)
chr7 (2-74)||(128627-128699)
[»] scaffold0586 (1 HSPs)
scaffold0586 (1-74)||(6346-6419)
[»] scaffold0059 (1 HSPs)
scaffold0059 (1-76)||(4755-4829)
[»] scaffold0003 (2 HSPs)
scaffold0003 (28-77)||(39344-39393)
scaffold0003 (1-77)||(49458-49534)
[»] scaffold0632 (1 HSPs)
scaffold0632 (1-77)||(3333-3408)
[»] scaffold0112 (1 HSPs)
scaffold0112 (1-77)||(37148-37223)
[»] scaffold0093 (2 HSPs)
scaffold0093 (1-76)||(2490-2564)
scaffold0093 (1-76)||(7113-7187)


Alignment Details
Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 2152226 - 2152123
Alignment:
Q  94 tttgctcaattctcccccaagctgccacagaacggcatgtcccaataaaaccacagcctttagaata--ttgtcaaagaacttaattgtagaaatcaaag 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  2152226 tttgctcaattctcccccaagctgccacagaacggcatgtcccaataaaaccacagcctttagaatattttgtcaaagaacttaattgtagaaatcaaag 2152127  T
Q  192 ggac 195  Q
    ||||    
T  2152126 ggac 2152123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 16650880 - 16650956
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||||||||||  |||||||| |||||||||||| |||||||||||||||||||||||||||    
T  16650880 aaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcc 16650956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22940647 - 22940723
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  22940647 aaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25523145 - 25523069
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| | ||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  25523145 aaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 25523069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19752987 - 19752912
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| ||| || |||| |||||||||||||||||||    
T  19752987 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 19752912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28538752 - 28538676
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||| |||  |||||||| |||||||| ||| ||| |||||||||||||||||||||||    
T  28538752 aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagcc 28538676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33160311 - 33160387
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||| | |||||||||| | ||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  33160311 aaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcc 33160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40255697 - 40255773
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||| |||| |||||||  |||||||| |||||||||||||||||| | |||||||||||||||||||    
T  40255697 aaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagcc 40255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25524152 - 25524229
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaatta-agggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||  || |||||||||||||  ||| |||||||||||||||||||    
T  25524152 aaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcc 25524229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1796130 - 1796054
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||| | ||||| ||| |||||||| ||| ||| |||||||||| ||||||||||||    
T  1796130 aaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcc 1796054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36486513 - 36486589
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||||||  |||||||| |||||||||||| ||| ||| | |||||||||||| ||||    
T  36486513 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcc 36486589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20216788 - 20216861
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||||||  |||||  | ||||||| |||||||| ||||||||||| ||||||||||||||||    
T  20216788 aaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24332989 - 24332916
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||||||| || ||| ||||||||| |||||||| ||| ||||||| | ||||||||||||||    
T  24332989 aaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2685820 - 2685768
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaatta 53  Q
    |||||||||||||||||||||||||||||||||||  |||||||| |||||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttgaaaatta 2685768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18486927 - 18487003
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| |||| | |||||||||| ||||||||| |||||||| ||| ||||||| || ||||||||||||||||    
T  18486927 aaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagcc 18487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25056406 - 25056482
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||  ||||||||||  |||||||| |||||||| ||| ||| | |||||||||||||||||||||    
T  25056406 aaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagcc 25056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28539845 - 28539917
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||||||| || |||| |||||| |||||||||    
T  28539845 aaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18154569 - 18154494
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||||||  |||||||| |||||||| ||| |||||||   |||||| ||||||||||    
T  18154569 aaaattgtagtttttgtacttagggg-tcaaaattgtaagtttttgaaagttaaggggaaaaaagttcactttagcc 18154494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20214271 - 20214196
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| ||| |  | ||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  20214271 aaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcc 20214196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 5778862 - 5778937
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| | ||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  5778862 aaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 5778937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36485376 - 36485302
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttag 75  Q
    |||||| ||||||||||||||| | |  |||||||| |||||||| ||| ||| |||||||||| ||||||||||    
T  36485376 aaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcactttag 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19754155 - 19754232
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtg-gaaaagtgcactttagcc 77  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||| ||| ||| ||| |  |||| ||||||||||||    
T  19754155 aaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcactttagcc 19754232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1015560 - 1015492
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgca 69  Q
    |||||||||| ||||||||  ||||| ||||||||| || ||||||||| ||| ||| |||||||||||    
T  1015560 aaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgca 1015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 5730517 - 5730441
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtgg-aaaagtgcactttagcc 77  Q
    ||||||| ||||| |||||||||   ||||||||| |||||||| ||| ||||||| || |||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagcc 5730441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18485214 - 18485138
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| |||||  |||||||||| ||||||||| |||||||| ||| |||  || | |||||||||||||||||    
T  18485214 aaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcc 18485138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 33158174 - 33158098
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||   |||||||| |||||||| ||| ||| |||   |||| ||||||||||||    
T  33158174 aaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcc 33158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 5962597 - 5962631
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaatt 35  Q
    |||||| ||||||||||||||||||||||||||||    
T  5962597 aaaattatagtttttgtacttaggggaccaaaatt 5962631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42195208 - 42195137
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||||||| |||||||| |||||| ||||||| | || ||||||||  ||||||| ||||||||||||||||    
T  42195208 aaaattgtagattttgtacatagggggccaaaatcgcaactttttaaag-ttaaggg-ggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1016888 - 1016940
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaatta 53  Q
    ||||||||||||||||||| |||  ||||||||||  || |||||||||||||    
T  1016888 aaaattgtagtttttgtacatagaagaccaaaattacaattttttaaaaatta 1016940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2686426 - 2686474
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaa 49  Q
    |||||| ||||||||||||||| | || |||||||| ||||||||||||    
T  2686426 aaaattatagtttttgtacttaagagatcaaaattgcaagtttttaaaa 2686474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 5777974 - 5777901
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| |||||||||||  |||||||| |||||||| ||| |||  || || ||||||||||||||||    
T  5777974 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagcc 5777901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25055488 - 25055412
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||| ||||||| |||||||| |||   || ||| |||  || |||||||||||||||||||    
T  25055488 aaaattgtagtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagcc 25055412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 57; Significance: 5e-24; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 17546 - 17470
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| | |||||||||||||||||    
T  17546 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagcc 17470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18801 - 18877
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| |||||||||||| |||||||||||||||| || ||||||||| ||| | | | |||||||||||||||||    
T  18801 aaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagcc 18877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 5e-24; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7899907 - 7899983
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  7899907 aaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7899983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36449854 - 36449778
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  36449854 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 36449778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18299449 - 18299373
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| |||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  18299449 aaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagttacgggtggaaaagtgcactttagcc 18299373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23869560 - 23869635
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  23869560 aaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtggaaaagtgcactttagcc 23869635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 38840518 - 38840594
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| | ||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  38840518 aaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 38840594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18904443 - 18904367
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||| ||| ||||||||| | |||||| ||| ||||||| |||||||||||||||||||    
T  18904443 aaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagcc 18904367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22848267 - 22848191
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||| ||| ||| | |||||||||||||||||    
T  22848267 aaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcc 22848191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 36450947 - 36451018
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||||||||| |||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||    
T  36450947 aaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcacttta 36451018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41879237 - 41879313
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||| ||||||||||| | ||||||| |||||||||    
T  41879237 aaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagcc 41879313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 11938823 - 11938889
Alignment:
Q  11 tttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||| ||||||||||| |||||||| ||| ||| |||||||||||||||||||||||    
T  11938823 tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 11938889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18869000 - 18868924
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||| ||||| | ||||||||| |||||||| ||| ||| |||||||||||| ||||||||||    
T  18869000 aaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 18868924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38839318 - 38839242
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||| ||||||| | ||||||| |||||||| ||||||||||| | |||| ||||||||||||    
T  38839318 aaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagcc 38839242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24476869 - 24476943
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| ||  ||| | ||||||||||| |||||    
T  24476869 aaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt--gggggaaaaagtgcactctagcc 24476943  T

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Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26544224 - 26544152
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||| |||||||||||||||||||  |||||||||| || ||||||||||||| |||| |||||||||||||||    
T  26544224 aaaactgtagtttttgtacttagga-accaaaattgtaaatttttaaaaattaggggtagaaaagtgcacttta 26544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 13570582 - 13570658
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| ||||||||||||||| ||||| ||||||| |||||||| ||| ||| |||| ||||| ||||||||||||    
T  13570582 aaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcc 13570658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18906012 - 18906088
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| | ||||||| |||||||| ||| |||   | |||||||||||||||||||    
T  18906012 aaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcc 18906088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 1034495 - 1034570
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| |||| |||||| ||||||||| | |||||| ||| ||||||| |||||||||||||||||||    
T  1034495 aaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11258836 - 11258912
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaatta-agggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| ||| ||| || | |||||| ||||||||||||    
T  11258836 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaa-tgcactttagcc 11258912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 802616 - 802691
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||  ||||| ||||||||| |||||||| ||| || |||| |||||||| ||||||||||    
T  802616 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactttagcc 802691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22587979 - 22588054
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||| ||| ||| | | |||||| ||||||||||||    
T  22587979 aaaattgtagtttttgtacatagggg-ccaaaattgcaagtttttgaaagttatgaggggaaaaatgcactttagcc 22588054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7898767 - 7898694
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||| | |||||||| | | ||||||| |||||||| ||| |||||||  |||||||||||||||    
T  7898767 aaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttta 7898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8534658 - 8534586
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||| | ||||||  ||| |||||||| |||||||| ||||||||||| ||||||| ||||||||    
T  8534658 aaaattgtagtttctatacttaaaggatcaaaattgtaagtttttgaaaattaaggg-ggaaaagagcacttta 8534586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13568048 - 13567975
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||| ||| |||   | |||||||| |||||||    
T  13568048 aaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18797323 - 18797246
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaaggg-tggaaaagtgcactttagcc 77  Q
    ||||||||||||||  |||||| |||  |||||||| |||||||| ||| ||| ||| ||||||||||||||||||||    
T  18797323 aaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagcc 18797246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41878170 - 41878092
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattg---aaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||| |||||||||||| |||||||||   | ||||||| ||| ||||||| || ||||||||||||||||    
T  41878170 aaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaaggg-gggaaagtgcactttagcc 41878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13030365 - 13030293
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagc 76  Q
    ||||||||| |||||||||||||||| ||||||||  |||||||| ||| |||  || ||||||||||||||||||    
T  13030365 aaaattgtaatttttgtacttagggg-ccaaaattacaagtttttgaaagtta--gggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16446230 - 16446154
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||| ||| | |   ||||||| |||||||| ||| |||||||| ||||| ||||||||||||    
T  16446230 aaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagcc 16446154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18300749 - 18300822
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagc 76  Q
    ||||||||||||||||||||||||||  |||||||| |||||| | ||| |||  || ||||||||||| ||||||    
T  18300749 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta--gggggaaaagtgcaatttagc 18300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 810806 - 810850
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagttttt 45  Q
    |||||||||||||||||||  ||||| ||||||||| ||||||||    
T  810806 aaaattgtagtttttgtacacagggggccaaaattgcaagttttt 810850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32739699 - 32739655
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagttttt 45  Q
    ||||||||||||||||||| || ||| ||||||||| ||||||||    
T  32739699 aaaattgtagtttttgtacataaggggccaaaattgcaagttttt 32739655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 1e-21; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 16704522 - 16704598
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||||||  |||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  16704522 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagcc 16704598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10784669 - 10784592
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaaggg-tggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||||||||||   ||||||| |||||||||||| |||||||  |||||||||||||||||||    
T  10784669 aaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactttagcc 10784592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14822436 - 14822360
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||| | |||||| ||| ||||||||| |||||||| |||||||||||  |||||||||||| |||||    
T  14822436 aaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcc 14822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 8659340 - 8659265
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  8659340 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 8659265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 8821948 - 8821873
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  8821948 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 8821873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1829628 - 1829701
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||| ||||||||||  |||||||| |||||||||||| ||| |||   ||||||||||||||    
T  1829628 aaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcacttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5658832 - 5658759
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||||||| ||||| || ||||||  || ||||||||| ||||||| |||||| |||||||||    
T  5658832 aaaattgtagtttttgtacatagggaactaaaattataactttttaaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 7316338 - 7316395
Alignment:
Q  20 ttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  7316338 ttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7316395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 14823600 - 14823677
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtg-gaaaagtgcactttagcc 77  Q
    ||||||||||||| |||||||| ||| | ||||||| |||||||| ||||||||||| |  |||||||||||||||||    
T  14823600 aaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcc 14823677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 6842308 - 6842384
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||| || |||||| ||||||||| || ||||| ||| |||  || |||||||||||||||||||    
T  6842308 aaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcc 6842384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 8822819 - 8822894
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| |||||||||||  |||||||| |||||||| ||| |||| |  |||||||||||||||||||    
T  8822819 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcactttagcc 8822894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12382736 - 12382811
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagc 76  Q
    |||||| |||||||  ||||||||||  |||||||  || |||||||||||||  |||||||||||||||||||||    
T  12382736 aaaattatagttttaatacttagggggtcaaaattacaaatttttaaaaattagaggtggaaaagtgcactttagc 12382811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29473153 - 29473082
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactt 72  Q
    ||||||||  ||||||| | ||||| |||||||||| || ||||||||| ||||||| ||||||||||||||    
T  29473153 aaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 27447965 - 27448014
Alignment:
Q  28 ccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||| || ||||||||| ||||||| |||||||||||||||||||    
T  27447965 ccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcc 27448014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7314955 - 7314880
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| |||||  |||||||||| ||||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  7314955 aaaattgttgttttgatacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 7314880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27322093 - 27322168
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| ||||| ||||||||||| ||||||||| ||| |||| |||  | |||| |||||||||||||||||||    
T  27322093 aaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcc 27322168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27437904 - 27437828
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| |   |||||| ||||||||| || ||||| ||| |||||||  ||||||||||||||||||    
T  27437904 aaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcc 27437828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 3721679 - 3721612
Alignment:
Q  10 gtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||| |||||||||||  |||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  3721679 gttttggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 3721612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 3722533 - 3722608
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| |||||||| ||  |||||||| |||||||| ||| ||| ||  |||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagcc 3722608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 8660230 - 8660304
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| | ||||||| |||||||| ||| ||| | | |||||||||||||||||||    
T  8660230 aaattgtggttttggtacttaggggtc-aaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 8660304  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 26574690 - 26574619
Alignment:
Q  6 tgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||| ||  |||||||| |||||||| ||| |||  ||||| ||| ||||||||||||    
T  26574690 tgtagtttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattgcactttagcc 26574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3333051 - 3333127
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| |||||| ||||||| | || ||||| ||| |||   | ||||||||||| |||||||    
T  3333051 aaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtgcaatttagcc 3333127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10785938 - 10785986
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaa 49  Q
    ||||||||||||||||||||||||||   ||||||| || |||||||||    
T  10785938 aaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaa 10785986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 34834605 - 34834677
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||| |||||  |||||||| || |||||||| |||||||| ||| ||| ||  ||||||||||||||||    
T  34834605 aaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttta 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1964466 - 1964542
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||| | |||||| ||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  1964466 aaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcc 1964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 19750600 - 19750673
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttag 75  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| || |||| |||||||||||||||||    
T  19750600 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19789206 - 19789133
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttag 75  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| || |||| |||||||||||||||||    
T  19789206 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1290223 - 1290299
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||| || ||||||||| ||| |||| ||| ||||||| |||||||||||||||||||    
T  1290223 aaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagcc 1290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49308052 - 49308127
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| ||| || |||| |||||||||||||||||||    
T  49308052 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 49308127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52491632 - 52491708
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||| |||| |||| |||||||||||| |||||||| ||| |||||||||||||||| ||||||||||    
T  52491632 aaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacactttagcc 52491708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 10471414 - 10471489
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  10471414 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10471489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21539096 - 21539162
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtg 67  Q
    |||||||||||||||  ||||||| | ||||||||| ||||||||||||||||||||||||||||||    
T  21539096 aaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtg 21539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8758862 - 8758935
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||| ||| ||||||| ||||||||||| ||||    
T  8758862 aaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12129699 - 12129626
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||| ||| ||||| | ||||||||||||||||    
T  12129699 aaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1963272 - 1963196
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| |||| | ||||||||| || ||||| ||| ||||||| |||||||||||||||||||    
T  1963272 aaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 1963196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 17383068 - 17382993
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| ||| || ||||  ||||||||||||||||||    
T  17383068 aaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcactttagcc 17382993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 17388236 - 17388311
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||| ||| || |||| |||||||||||||||||||    
T  17388236 aaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 17388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31599865 - 31599789
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||||||  |||||||| |||||||||||| ||| ||| | |||||||||||| ||||    
T  31599865 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcc 31599789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31601010 - 31601086
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||||||  |||||||| |||||||||||| |||  || | |||||||||||||||||    
T  31601010 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagcc 31601086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 48780323 - 48780248
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| |||||||||||  |||||||| |||||||||||| ||| ||| |||||||||||||||||||    
T  48780323 aaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcactttagcc 48780248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35935558 - 35935631
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||| |||||||||||| | ||||||| || ||||||||| ||||||| || |||||||||||||    
T  35935558 aaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1835127 - 1835203
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||  ||||||||||  |||||||| |||||||| ||| ||| || ||||||||||||||||||||    
T  1835127 aaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagcc 1835203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8757750 - 8757675
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| ||| ||||||| | |||||||||||||||||    
T  8757750 aaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagttaaggg-gaaaaagtgcactttagcc 8757675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 25685848 - 25685923
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  25685848 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 25685923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1834195 - 1834119
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||| ||||||  |||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  1834195 aaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttagcc 1834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26421647 - 26421722
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||| |  |||||||| |||||||| ||| || || | |||||||||||||||||||    
T  26421647 aaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagcc 26421722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 10470621 - 10470546
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||  |||| |||||||| ||  |||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  10470621 aaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10470546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 25685009 - 25684934
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| |||||||| ||  |||||||| |||||||| ||| ||| ||| |||||||||||||||||||    
T  25685009 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 25684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10447083 - 10447006
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaag-ggtggaaaagtgcactttagcc 77  Q
    |||||||| |||||||||| |||||| | ||||||| || ||||| ||| ||||| || |||||||||||||||||||    
T  10447083 aaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcactttagcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 13386090 - 13386014
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaag-tttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| ||||||||| ||| ||||| ||| |||  || |||||||||||||||||||    
T  13386090 aaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagcc 13386014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 13509384 - 13509459
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||  ||||| |||| ||||||||| || ||||||||| || |||| |||||||| ||||||||||    
T  13509384 aaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaaaagtacactttagcc 13509459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 5526152 - 5526226
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| |||||  |||||||||| ||||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  5526152 aaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagttagagg-ggaaaagtgcactttagcc 5526226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8155813 - 8155741
Alignment:
Q  1 aaaattgtagtttttgtacttagggga-ccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||||||||||||| |||||||||| | ||||||| |||||||| ||| |||  || ||||||||||||||||    
T  8155813 aaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 48781072 - 48781146
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| |||||||||| |||||||||| || ||||| ||| |||  || |||||||||||||||||||    
T  48781072 aaattgtggttttagtacttaggg-accaaaattgcaaatttttgaaagttagagggggaaaagtgcactttagcc 48781146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1289173 - 1289100
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||| ||||||| ||| |||||||  || | ||| ||| ||||||| |||||||| |||||||    
T  1289173 aaaattgtagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcacttta 1289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 55603556 - 55603628
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||| |||||||||||||  ||||||  ||||||| |||||||| ||| ||||||| | ||||||||||||||    
T  55603556 aaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaaggg-gaaaaagtgcacttta 55603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10448285 - 10448361
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| |||||| | ||||| | || ||||| ||| ||| ||| ||  |||||||||||||||    
T  10448285 aaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttagcc 10448361  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 13386558 - 13386634
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaa-gtgcactttagcc 77  Q
    ||||||| ||||| ||||||| |||  |||||||| |||||||| ||| ||| ||| |||||| |||||||||||||    
T  13386558 aaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcc 13386634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37728590 - 37728638
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaa 49  Q
    ||||||||||||||||||| |||| | ||||||||| || |||||||||    
T  37728590 aaaattgtagtttttgtacataggaggccaaaattgcaactttttaaaa 37728638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11437224 - 11437300
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| ||| ||||||| | |||||||||||||||||    
T  11437224 aaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcc 11437300  T

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Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39698639 - 39698563
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| |||||| |||||||||||| |||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  39698639 aaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcc 39698563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24422876 - 24422800
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||||||  |||||||| |||||||| ||| ||||||| | |||||||||||||||||    
T  24422876 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagcc 24422800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36613929 - 36614005
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||| ||| ||| |||||| ||||||||||||    
T  36613929 aaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagcc 36614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 51684442 - 51684366
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||| |||||| ||||||||| || ||||||||| ||||||| |||||||||||||||||||    
T  51684442 aaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcactttagcc 51684366  T

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Target: chr1; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 52275044 - 52274968
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||||||  |||||||| |||||||| ||| ||| ||| | |||||||||||||||||    
T  52275044 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcc 52274968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24426100 - 24426173
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| ||| |||  || || |||||||||||||    
T  24426100 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39153141 - 39153214
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||||||| || ||| ||||||||| |||||||| ||| ||||||| | ||||||||||||||    
T  39153141 aaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7674602 - 7674528
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||| || |||| ||||||| |||||||||||    
T  7674602 aaaattgtagtttttgtactta-gggcccaaaattgcaagtttttaaaagtt-aggggggaaaagggcactttagcc 7674528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11190461 - 11190385
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||||||||  ||||| |||||||||| || ||||||||| |||||||  ||||||||||||||||||    
T  11190461 aaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcc 11190385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14999360 - 14999285
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||||||  |||||||| |||||||| ||| || |||| |||||||| ||||||||||    
T  14999360 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacactttagcc 14999285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23980491 - 23980567
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| ||||||||||||||||||  ||||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  23980491 aaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactttagcc 23980567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 35067027 - 35067103
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||| | |||||| ||||||| | || ||||| ||| ||||||| |||||||||||||||||||    
T  35067027 aaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagcc 35067103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35594292 - 35594217
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||  |||||||||| | ||||||| |||||||| ||| ||| |||||||||||||||||||||||    
T  35594292 aaaattgtagttttaatacttaggggtc-aaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 35594217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 45148656 - 45148581
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||| ||| ||||| | | |||||||||||||||||    
T  45148656 aaaattgtagttttt-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagcc 45148581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 45157234 - 45157309
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||| ||| || |||| || ||||||||||||||||    
T  45157234 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaactt-agggggggaaagtgcactttagcc 45157309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 52827422 - 52827347
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| |||||||||||  |||||||| |||||||| ||| ||| ||| |||||||||||||||||||    
T  52827422 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 52827347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 39222501 - 39222575
Alignment:
Q  4 attgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaatt-aagggtggaaaagtgcactttagcc 77  Q
    |||||||||||| |||||||||| ||||||||| |||||||| ||| || ||||| | |||||||||||||||||    
T  39222501 attgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagcc 39222575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 14999983 - 15000056
Alignment:
Q  4 attgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||| ||| ||  | ||||||| |||||||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcc 15000056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39152007 - 39151934
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||||||| |||||| ||||||||  |||||||| ||| ||||||| | |||| |||||||||    
T  39152007 aaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcacttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43378738 - 43378810
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||| ||| ||||| |  |||||||||||||||    
T  43378738 aaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaagag-agaaaagtgcacttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45149996 - 45150068
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||||| ||||||||||||| ||| ||||||||| |||||||| ||| || |||| ||||||||||||||||    
T  45149996 aaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 45150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 50681632 - 50681705
Alignment:
Q  4 attgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||| || |||| |  ||||||||| |||||||| ||||||||| | |||||||||||||||||||    
T  50681632 attgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagcc 50681705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11436118 - 11436042
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||||||   | ||||||||| |||||||| ||| |||| || |||||||||||||||||||    
T  11436118 aaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcc 11436042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 39699792 - 39699867
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||| ||||||||||||  |||||||| ||||| || ||| || |||| |||||||||||||||||||    
T  39699792 aaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcactttagcc 39699867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 52828096 - 52828168
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||| ||||| ||||||||||  ||||||||| |||||||| |||||||  || ||||||||||||||||    
T  52828096 aaattgtggttttggtacttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcacttta 52828168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43058861 - 43058789
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||||||||||||||  |||||||| |||||||| ||| || |||| | ||||||| ||||||    
T  43058861 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagtt-agggggaaaaagtgtacttta 43058789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44411991 - 44412032
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtt 42  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  44411991 aaaattgtagtttttgtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 45156125 - 45156052
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||||||| |||  |  |||||||| |||||||| ||| ||||||| ||||||||| ||||||    
T  45156125 aaaattgtagtttttgtacatagaaggtcaaaattgtaagtttttgaaacttaagggaggaaaagtgaacttta 45156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36612928 - 36612853
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||| |   ||||||||| || ||||| ||| ||||||| |||||| ||||||||||||    
T  36612928 aaaattgtagtttttgtacttaagat-ccaaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcc 36612853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 51685790 - 51685866
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| ||| || ||||||| | || ||||| ||| |||  || |||||||||||||||||||    
T  51685790 aaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagcc 51685866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 41364903 - 41364829
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||| ||||||| ||||||||| |||||||| ||| ||| ||| | |||||||||||||||||    
T  41364903 aaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttaggggag-aaaagtgcactttagcc 41364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40384801 - 40384748
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaa 54  Q
    ||||||||||||||||||| |||| ||| ||||||| || ||||| ||||||||    
T  40384801 aaaattgtagtttttgtacataggagactaaaattgcaactttttgaaaattaa 40384748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12390006 - 12390082
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| || ||||||||| ||||||| |||||| | || ||||| ||| ||||||  |||||| ||||||||||||    
T  12390006 aaaattataatttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagcc 12390082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33088642 - 33088718
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||  ||  |||||||| |||||||| ||  |||  |  |||||||||||||||||||    
T  33088642 aaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcactttagcc 33088718  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44404518 - 44404442
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| ||||||||||||||||||| | |||||||  ||||||| ||| ||| | | | ||||||||| |||||||    
T  44404518 aaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagcc 44404442  T

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Target: scaffold0019 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 61484 - 61559
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagc 76  Q
    |||||| ||||||||||||||||||| | ||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  61484 aaaattatagtttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcactttagc 61559  T

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Target: scaffold0019; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 60166 - 60090
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||| ||||||  |||||||| |||||||||||| |||  || |||||||||||||||||||    
T  60166 aaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcactttagcc 60090  T

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Target: chr8 (Bit Score: 52; Significance: 5e-21; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 29968364 - 29968434
Alignment:
Q  3 aattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  29968364 aattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaaggg-ggaaaagtgcacttta 29968434  T

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Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30335715 - 30335639
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||| ||||||||||||| |  ||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  30335715 aaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcc 30335639  T

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Target: chr8; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43661341 - 43661267
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttag 75  Q
    |||||| |||||||||||| || ||||||||||||| || ||||| |||||||||||| ||||||||||||||||    
T  43661341 aaaattatagtttttgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcactttag 43661267  T

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Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5514057 - 5513982
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| ||| || |||| | |||||||||||||||||    
T  5514057 aaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagtt-agggggtaaaagtgcactttagcc 5513982  T

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Target: chr8; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10007788 - 10007864
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| |||| | |||||||||| ||||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  10007788 aaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10007864  T

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Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22221389 - 22221465
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||  ||||||||||  |||||||| |||||||| ||| ||| |||||||||||||||||||||||    
T  22221389 aaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 22221465  T

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Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22227731 - 22227807
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||  ||||||||||  |||||||| |||||||| ||| ||| |||||||||||||||||||||||    
T  22227731 aaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 22227807  T

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Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 1823627 - 1823552
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||| ||  |||||||| |||||||||||| ||||||| | |||||| ||||||||||    
T  1823627 aaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcc 1823552  T

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Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1824103 - 1824174
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactt 72  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||| |||  || |||||| |||||||    
T  1824103 aaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 1858072 - 1857997
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||| ||  |||||||| |||||||||||| ||||||| | |||||| ||||||||||    
T  1858072 aaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcc 1857997  T

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Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1858548 - 1858619
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactt 72  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||| |||  || |||||| |||||||    
T  1858548 aaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

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Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8389714 - 8389787
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||||||| || ||||||||||||| || ||||| ||| ||||| | ||||||||||||||||    
T  8389714 aaaattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcacttta 8389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11287852 - 11287779
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||| ||||||||| || ||||||||| |||||||| ||| ||| ||||| ||||||||||||||    
T  11287852 aaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 12353396 - 12353460
Alignment:
Q  12 ttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  12353396 ttttgtacttagggggccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcc 12353460  T

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Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12351997 - 12351921
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||||||  |||||||| || ||||| ||| ||||||| || ||| ||||||||||||    
T  12351997 aaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcc 12351921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18970986 - 18970920
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgc 68  Q
    |||||||||||||||||||||||||| ||||||||||||| |||| ||| || |||| ||||||||||    
T  18970986 aaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18978095 - 18978029
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgc 68  Q
    |||||||||||||||||||||||||| ||||||||||||| |||| ||| || |||| ||||||||||    
T  18978095 aaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18979145 - 18979220
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagc 76  Q
    ||||||||||||||| || ||||||| ||||||||| ||||| || ||| ||| ||| ||||||||||||||||||    
T  18979145 aaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

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Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40471172 - 40471244
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||||||||||||||| ||| || |||||||||| |||||||| ||| |||| || ||||||||||||||||    
T  40471172 aaaattgtagtttttgtatttatgg-accaaaattgtaagttttttaaagttaaagggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10006420 - 10006344
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| |||||  |||||||||| ||||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  10006420 aaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 10006344  T

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Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42982682 - 42982758
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||    ||||| ||||||||  || ||||||||| |||| ||||||||||||||||||||||    
T  42982682 aaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagcc 42982758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43661848 - 43661924
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| |||||||||||| ||| |||  ||||||| || ||||| ||| |||||||||||||||||||||| ||||    
T  43661848 aaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagcc 43661924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 45114541 - 45114617
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||| ||||| ||| | |||||||||| |||||||| ||| ||| ||| |||||||||||||| ||||    
T  45114541 aaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcc 45114617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 23170034 - 23170098
Alignment:
Q  11 tttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||| |||||||| |||||||| |||||| |||| |||||| ||||||||||||    
T  23170034 tttttgtacttaggggatcaaaattgcaagtttttgaaaatt-aggggggaaaa-tgcactttagcc 23170098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11282084 - 11282011
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||  ||||||||  |||||| ||||||||| || ||||||||| ||||||| | ||||||||||||||    
T  11282084 aaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24361218 - 24361290
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||| ||||||||| ||| |||||||||| |||| |||||||||| ||| ||  |||||||||||||||    
T  24361218 aaaattgtaatttttgtacatagaggaccaaaatcgaaattttttaaaaa-taaaggaagaaaagtgcacttta 24361290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 24483200 - 24483143
Alignment:
Q  20 ttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||||||| |||||||| ||||||| | | |||||||||||||||||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcc 24483143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22220464 - 22220388
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||| ||||||  |||||||| |||| ||| ||| |||  || |||||||||||||||||||    
T  22220464 aaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagcc 22220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24122958 - 24122883
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| |||||||||||||||||||  |||||||| || ||||| ||| || |||| |||||| ||||||||||||    
T  24122958 aaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcactttagcc 24122883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 30336526 - 30336602
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||| | | ||||||  |||||||| ||| ||| ||| | | |||||||||||||||    
T  30336526 aaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagcc 30336602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8388538 - 8388464
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| |||||||||||| |||||| | ||||||| || ||||||||| |||  || || ||||||||||||||||    
T  8388538 aaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagtta--ggggggaaagtgcactttagcc 8388464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32207350 - 32207424
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||   |||||||| |||||||| ||  |||  || || ||||||||||||||||    
T  32207350 aaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtta--ggggggaaagtgcactttagcc 32207424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 36249601 - 36249552
Alignment:
Q  28 ccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||| || ||||| ||| ||||||| |||||||||||||||||||    
T  36249601 ccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcc 36249552  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5514295 - 5514370
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||| ||||  | | ||||||| |||||||| |||||| ||||   |||||||||||||||||    
T  5514295 aaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaatt-aggggataaaagtgcactttagcc 5514370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 11456694 - 11456638
Alignment:
Q  21 taggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| ||||||||| || ||||| ||||||| |||  ||||||||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcc 11456638  T

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Target: scaffold0320 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19564 - 19488
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| |||||||||| ||||||||| ||| |||| ||||||||||| |||||| ||||||||||||    
T  19564 aaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagcc 19488  T

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Target: scaffold0294 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5463 - 5539
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||| |||  |||||||| |||||||| ||||||| ||| |||||||||||||||||||    
T  5463 aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagcc 5539  T

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Target: scaffold0294; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4518 - 4442
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||| |||||||||||| ||| | ||||||| |||||||| ||||||| ||| | ||| |||||||||||||    
T  4518 aaaattgtaatttttgtacttaaggggctaaaattgtaagtttttgaaaattaggggggaaaatgtgcactttagcc 4442  T

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Target: scaffold0045 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49109 - 49185
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||  |||||||| | ||||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagcc 49185  T

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Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7758478 - 7758402
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||||||  |||||||| |||||||| ||| ||||||| | |||||||||||||||||    
T  7758478 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcc 7758402  T

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Target: chr3; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19984925 - 19984849
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||| ||| ||| ||| |||||||||||||||||||    
T  19984925 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcc 19984849  T

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Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29931302 - 29931226
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||| ||||||| | ||||||| |||||||| ||| ||| |||||||||||||||||||||||    
T  29931302 aaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 29931226  T

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Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29980456 - 29980380
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||| ||||||| | ||||||| |||||||| ||| ||| |||||||||||||||||||||||    
T  29980456 aaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 29980380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 51038815 - 51038891
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||| | ||||||  |||||||| || ||||||||| |||||||||||||||||||||||||||    
T  51038815 aaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcc 51038891  T

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Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 54539831 - 54539755
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||| |||||||   ||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  54539831 aaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcc 54539755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 54540815 - 54540891
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||| |||  |||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  54540815 aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 54540891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8456553 - 8456479
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagc 76  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| |||||| |||| | ||||||||||||||||    
T  8456553 aaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcactttagc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7267719 - 7267647
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||| ||| ||||||| ||||||||||||||||    
T  7267719 aaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcacttta 7267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22776837 - 22776913
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| |||||| ||||||||| || ||| | ||| ||| |||||||||||||||||||||||    
T  22776837 aaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagcc 22776913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29932724 - 29932799
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  29932724 aaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 29932799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29981878 - 29981953
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  29981878 aaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 29981953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 51470047 - 51469972
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||| ||||||| ||  |||||||||||||||||||    
T  51470047 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcc 51469972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12700249 - 12700175
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| ||| |||  || || ||||||||||||||||    
T  12700249 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagcc 12700175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23770432 - 23770505
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||||||| || ||||||||||||| || ||||| |||||||||||  ||||| |||||||||    
T  23770432 aaaattgtagtttttgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcacttta 23770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 535807 - 535883
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| |||||||  |||||| ||||||||||||| |||||||| ||| ||| |||||||||||| ||||||||||    
T  535807 aaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 535883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 46720017 - 46719941
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||| |||||| ||||||| | || ||||||||| ||||||| |||||| ||||||||||||    
T  46720017 aaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagcc 46719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 55192020 - 55192095
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||| |||||| | ||||||||||    
T  55192020 aaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaa-tacactttagcc 55192095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 47615591 - 47615649
Alignment:
Q  19 cttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| ||||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 47615649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 49216321 - 49216247
Alignment:
Q  3 aattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||| ||||||  |||||||| || ||||| ||| ||| | |||||||||||||||||||||    
T  49216321 aattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcc 49216247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24516536 - 24516464
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttt 73  Q
    ||||||||||||||| |||||||||  ||||||||| |||||||| ||| ||| ||| | |||||||||||||    
T  24516536 aaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 47610606 - 47610678
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||| ||| |||  || ||||||||||||||||    
T  47610606 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 53614895 - 53614819
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||  ||| |||| ||||||| |||||||| ||| ||||||| |||||| ||||||||||||    
T  53614895 aaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagcc 53614819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 5001275 - 5001200
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| ||||||||| ||| |||| |||  || ||| |||||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcc 5001200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6170348 - 6170281
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgc 68  Q
    ||||||||| |||||||||||| |||| |||||||| |||||||| ||| ||| ||||| ||||||||    
T  6170348 aaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagttatgggtgaaaaagtgc 6170281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19986095 - 19986173
Alignment:
Q  1 aaaattgtagtttttgtacttagg--ggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| ||| ||||  || ||||||||| |||||||| ||| ||||| | |||||||||||||||||||    
T  19986095 aaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagcc 19986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 47609772 - 47609697
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| |||||||||||  |||||||| |||||||| ||| ||| ||| ||||||||||| |||||||    
T  47609772 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttagcc 47609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7268852 - 7268924
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||| | |||||||| | ||||||||| |||||||| ||| || |||| ||||||||||||||||    
T  7268852 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 7268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12703525 - 12703600
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||||| ||||||||  || ||||| ||| || || | | |||||||||||||||||    
T  12703525 aaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtt-agagggaaaaagtgcactttagcc 12703600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23769933 - 23769857
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||| || ||| |||  ||||||| || || || ||| |||||||||||||||||||||| ||||    
T  23769933 aaaattgtagtttttgcacatagaggattaaaattgcaacttgttgaaagttaagggtggaaaagtgcacttcagcc 23769857  T

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Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31645049 - 31645005
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagttttt 45  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||||    
T  31645049 aaaattgtagtttttgcacttagggggccaaaattgtaagttttt 31645005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 46721245 - 46721321
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| ||||||   ||||| | || ||||||||| ||| |||  ||||||||||||||||||    
T  46721245 aaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactttagcc 46721321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 47614261 - 47614185
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| |||||  |||||||||| ||||||||| |||||||| ||| |||  || | |||||||||||||||||    
T  47614261 aaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttagcc 47614185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 53616042 - 53616114
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||||||||||||||| || || |  ||||||  |||| ||||||| ||||||| ||||||||||||||||    
T  53616042 aaattgtagtttttgtacataaggaattaaaattacaagtgtttaaaagttaagggaggaaaagtgcacttta 53616114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6249685 - 6249618
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgc 68  Q
    |||||||||||||||||||||| ||||  ||||||| |||||||| ||| ||| || || ||||||||    
T  6249685 aaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagttatggatgaaaaagtgc 6249618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 51470481 - 51470555
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| |||||||||||| | |||||| |||||||| ||| || |||| |||| ||||||||||||||    
T  51470481 aaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcactttagcc 51470555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11670460 - 11670406
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaag 55  Q
    |||||| |||||||| |||||||||||| ||||||| || ||||| |||||||||    
T  11670460 aaaattatagtttttatacttaggggactaaaattgcaaatttttgaaaattaag 11670406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 534575 - 534499
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| |||| |  |||||||| |||||||| | | |||  || | |||||||||||||||||    
T  534575 aaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagcc 534499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5029708 - 5029783
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| ||||| ||||||||| | ||||||||| ||| |||| |||  || ||| |||||||||||||||||||    
T  5029708 aaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcc 5029783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8875982 - 8875906
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| || ||| | ||||||| |  |||||  || |||||||  ||||||||||||||||||    
T  8875982 aaaattgtagtttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcc 8875906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34019170 - 34019226
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaaggg 57  Q
    ||||||||||| ||||||| ||||||  |||||||| |||||||| ||| |||||||    
T  34019170 aaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaaggg 34019226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 51037611 - 51037536
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||| | ||| ||  |||||||| || ||||| ||| |||||||  ||||||||||||||||||    
T  51037611 aaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaaggg-agaaaagtgcactttagcc 51037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52840629 - 52840705
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| |||||  || ||||||  ||||||||| |||||||| ||| ||| ||| ||||||| |||||||||||    
T  52840629 aaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcactttagcc 52840705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 309 - 233
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| |||||||||||| |||||||||||||||| || ||||| ||| ||||||| || ||||||||||||||||    
T  309 aaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagcc 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1003 - 1058
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagg 56  Q
    |||||| |||||||||||| || ||||||||||||| || ||||||||| ||||||    
T  1003 aaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagttaagg 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18371500 - 18371424
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||| ||| ||| | | |||||||||||||||||||    
T  18371500 aaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 18371424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22630477 - 22630553
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||| ||| ||| ||  |||||||||||||||||||    
T  22630477 aaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttagcc 22630553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34352811 - 34352887
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| |||||| |||||||| ||||||||||| |||||||||| |||||||  |||| |||||||||||||||||    
T  34352811 aaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttagcc 34352887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 127411 - 127337
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||| ||| || |||| |||||||||||||||||||    
T  127411 aaattgtggttttggtacttaggggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 127337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 3227620 - 3227695
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||| ||| ||| ||| |||||||||||||||||||    
T  3227620 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 3227695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 31949397 - 31949322
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||| ||||||| ||  |||||||||||||||||||    
T  31949397 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcc 31949322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31659699 - 31659622
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtgg-aaaagtgcactttagcc 77  Q
    ||||||||||||||||||||||||||  |||||||| |||||||| ||| ||| ||| || |||||||||||||||||    
T  31659699 aaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttagcc 31659622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11658455 - 11658379
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||||||| |||||| | ||||||| | |||||| ||| ||||||| ||||||||||| |||||||    
T  11658455 aaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcc 11658379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18372482 - 18372534
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaatta 53  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| |||||||    
T  18372482 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaatta 18372534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 20163585 - 20163657
Alignment:
Q  5 ttgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| |||||  ||||||||| |||||||| ||| ||| ||||||| |||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcc 20163657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 17782579 - 17782654
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  17782579 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 17782654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 3227182 - 3227109
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagc 76  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||| |||||| |||| || |||||||||||||||    
T  3227182 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaatt-agggggggaaagtgcactttagc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 17781736 - 17781663
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttag 75  Q
    ||||||| ||||| |||||||||||  |||||||| |||||||| ||| ||| ||| |||||||||||||||||    
T  17781736 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22629562 - 22629483
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaag---ggtggaaaagtgcactttagcc 77  Q
    |||||||||||||||||||||||| | ||||||||  |||||||| |||||||||   || |||||| ||||||||||||    
T  22629562 aaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgcactttagcc 22629483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7500530 - 7500455
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| |||| | ||||||| ||| |||||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  7500530 aaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcc 7500455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7501877 - 7501953
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| |||||  |||||||||| ||||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  7501877 aaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 7501953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 48934928 - 48935004
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| |||||||||||||||| ||  |||||||  |||||||| ||| ||| |||||||||| ||||||||||||    
T  48934928 aaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagcc 48935004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 31949828 - 31949903
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| ||||| ||| ||||||| ||||||||| |||||||| ||| ||| ||| |||| ||||||||||||||    
T  31949828 aaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcactttagcc 31949903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 769489 - 769413
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| || ||||||||||||||    |||||||| |||||||| |||||||  ||||||||| ||||||||||||    
T  769489 aaaattataatttttgtacttaggatgtcaaaattgcaagtttttgaaaattacaggtggaaaattgcactttagcc 769413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14999180 - 14999249
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactt 72  Q
    |||||||||||||||||| |||||||  |||||||| ||||||| ||||  | |||| ||||||||||||||    
T  14999180 aaaattgtagtttttgtatttagggggtcaaaattgcaagttttgaaaa--ttaggggggaaaagtgcactt 14999249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  3 aattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcac 70  Q
    |||||| ||||| ||||||||||| ||||||||| |||||||| ||| |||  || ||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 47525393 - 47525468
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||| |||||  |||||||||| | ||||||| |||||||| ||| |||  || |||||||||||||||||||    
T  47525393 aaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 47525468  T

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Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 34174010 - 34174083
Alignment:
Q  3 aattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| ||||| ||||||||||| ||||||||| ||| |||| |||  | |||| |||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcactttagcc 34174083  T

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Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11662576 - 11662649
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||| |||||||||||| ||| |  | ||||||| |||||||| ||| ||||||| |||||| |||||||||    
T  11662576 aaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42886311 - 42886384
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    |||||||||||||||||| |||||||  |||||||| || ||||| ||| ||| | |  |||||||||||||||    
T  42886311 aaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcacttta 42886384  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 128627 - 128699
Alignment:
Q  2 aaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||| ||||| |||||||||||  |||||||| || ||||| ||| ||| ||  ||||||||||||||||    
T  128627 aaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T

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Target: scaffold0586 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6419 - 6346
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcacttta 74  Q
    ||||||||||||||||||| |||||| | ||||| | || ||||| ||| ||||||| ||||||||||||||||    
T  6419 aaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcacttta 6346  T

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Target: scaffold0059 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 4755 - 4829
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagc 76  Q
    ||||||||||||| |||| ||||||| ||||||||| | |||||||||| || |||| || |||||||||||||||    
T  4755 aaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt-agggagggaaagtgcactttagc 4829  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 39393 - 39344
Alignment:
Q  28 ccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||| || ||||||||| ||||||| |||||||||||||||||||    
T  39393 ccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcc 39344  T

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Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49458 - 49534
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    ||||||||||||||| |   |||||| ||||||||| || ||||| ||| |||||||  ||||||||||||||||||    
T  49458 aaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcc 49534  T

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Target: scaffold0632 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3333 - 3408
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||| |||||||||||| || |||  |||||||| |||||||| ||| | ||||| |||||||||||||||||||    
T  3333 aaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaagt-aaggggggaaaagtgcactttagcc 3408  T

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Target: scaffold0112 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37223 - 37148
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagcc 77  Q
    |||||||| |||||||||||||||||  |||||||| || ||||| ||||   |||| |||||||||||||||||||    
T  37223 aaaattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaagataggg-ggaaaagtgcactttagcc 37148  T

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Target: scaffold0093 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2490 - 2564
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagc 76  Q
    ||||| || |||||||||||||||||  |||||||| ||||||||  ||| | |||| ||||||||||||||||||    
T  2490 aaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagttaggg-ggaaaagtgcactttagc 2564  T

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Target: scaffold0093; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7113 - 7187
Alignment:
Q  1 aaaattgtagtttttgtacttaggggaccaaaattgaaagtttttaaaaattaagggtggaaaagtgcactttagc 76  Q
    ||||| || |||||||||||||||||  |||||||| ||||||||  ||| | |||| ||||||||||||||||||    
T  7113 aaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagttaggg-ggaaaagtgcactttagc 7187  T

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