View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11009_low_12 (Length: 436)

Name: NF11009_low_12
Description: NF11009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11009_low_12
NF11009_low_12
[»] chr7 (29 HSPs)
chr7 (16-422)||(43931692-43932097)
chr7 (43-288)||(14206690-14206936)
chr7 (43-288)||(14215380-14215626)
chr7 (37-311)||(13446506-13446780)
chr7 (62-310)||(25153653-25153901)
chr7 (201-308)||(43930316-43930423)
chr7 (156-309)||(4858311-4858464)
chr7 (39-192)||(25532257-25532410)
chr7 (202-311)||(22061808-22061917)
chr7 (114-311)||(41514992-41515187)
chr7 (181-318)||(43007641-43007778)
chr7 (182-306)||(4857200-4857324)
chr7 (114-310)||(28326315-28326510)
chr7 (59-240)||(24873467-24873648)
chr7 (219-312)||(40930411-40930504)
chr7 (59-104)||(43111634-43111679)
chr7 (96-196)||(17288149-17288249)
chr7 (52-104)||(24494179-24494231)
chr7 (201-308)||(19279624-19279731)
chr7 (181-240)||(22746312-22746371)
chr7 (222-312)||(1970806-1970896)
chr7 (142-324)||(18802342-18802524)
chr7 (156-310)||(40926486-40926640)
chr7 (201-310)||(22744741-22744850)
chr7 (126-195)||(35296752-35296821)
chr7 (181-234)||(43936132-43936185)
chr7 (141-197)||(10955956-10956012)
chr7 (155-203)||(26146670-26146718)
chr7 (180-312)||(43006378-43006510)
[»] chr3 (30 HSPs)
chr3 (13-311)||(25585656-25585955)
chr3 (39-310)||(32980300-32980573)
chr3 (43-311)||(11220513-11220780)
chr3 (128-253)||(43345371-43345496)
chr3 (182-312)||(8371213-8371343)
chr3 (201-310)||(25583109-25583218)
chr3 (128-212)||(8372555-8372639)
chr3 (141-208)||(7921595-7921662)
chr3 (139-195)||(17345420-17345476)
chr3 (201-309)||(13077963-13078071)
chr3 (201-311)||(42633898-42634008)
chr3 (201-311)||(51825633-51825743)
chr3 (95-195)||(14744176-14744275)
chr3 (182-310)||(26798899-26799027)
chr3 (96-195)||(10339896-10339995)
chr3 (181-240)||(29536779-29536838)
chr3 (181-312)||(49334329-49334460)
chr3 (187-310)||(54653964-54654087)
chr3 (182-240)||(23559884-23559942)
chr3 (181-311)||(41387425-41387555)
chr3 (242-312)||(48338170-48338240)
chr3 (157-203)||(49380919-49380965)
chr3 (181-310)||(7820385-7820514)
chr3 (138-191)||(20486122-20486175)
chr3 (181-310)||(42632701-42632830)
chr3 (96-196)||(10301722-10301822)
chr3 (222-310)||(10987686-10987774)
chr3 (199-303)||(43101896-43102000)
chr3 (139-195)||(48253043-48253099)
chr3 (139-195)||(53809443-53809499)
[»] chr8 (39 HSPs)
chr8 (37-240)||(37274952-37275156)
chr8 (59-312)||(29739512-29739766)
chr8 (96-309)||(36939940-36940153)
chr8 (59-310)||(35945306-35945558)
chr8 (201-312)||(36070171-36070282)
chr8 (37-194)||(34616245-34616403)
chr8 (67-186)||(37473912-37474033)
chr8 (52-195)||(13514729-13514871)
chr8 (52-195)||(13604262-13604404)
chr8 (237-307)||(42314864-42314934)
chr8 (201-311)||(43277933-43278043)
chr8 (138-195)||(16362529-16362586)
chr8 (201-310)||(38591019-38591128)
chr8 (218-310)||(37323343-37323435)
chr8 (199-311)||(38589815-38589926)
chr8 (52-104)||(44102150-44102202)
chr8 (182-313)||(13367043-13367174)
chr8 (201-312)||(43275743-43275854)
chr8 (182-308)||(117045-117171)
chr8 (76-194)||(19914793-19914911)
chr8 (202-312)||(31623899-31624009)
chr8 (114-203)||(9853672-9853760)
chr8 (242-311)||(11081085-11081154)
chr8 (59-104)||(21671217-21671262)
chr8 (188-312)||(31625383-31625506)
chr8 (115-195)||(38790179-38790259)
chr8 (222-310)||(41867949-41868037)
chr8 (172-311)||(24068324-24068463)
chr8 (182-309)||(37276236-37276363)
chr8 (39-90)||(37323494-37323545)
chr8 (67-101)||(37473696-37473730)
chr8 (67-101)||(37473804-37473838)
chr8 (111-197)||(42793810-42793896)
chr8 (96-193)||(2075487-2075584)
chr8 (139-191)||(22621084-22621136)
chr8 (216-312)||(36734571-36734667)
chr8 (182-318)||(37324681-37324817)
chr8 (96-212)||(39516404-39516520)
chr8 (138-186)||(40251305-40251353)
[»] scaffold0290 (2 HSPs)
scaffold0290 (43-311)||(8373-8642)
scaffold0290 (182-312)||(9471-9601)
[»] scaffold0051 (1 HSPs)
scaffold0051 (39-308)||(22125-22389)
[»] chr6 (9 HSPs)
chr6 (43-228)||(34083136-34083320)
chr6 (45-191)||(18773768-18773915)
chr6 (60-240)||(31740142-31740323)
chr6 (201-320)||(22299915-22300034)
chr6 (181-310)||(8412308-8412437)
chr6 (156-321)||(33807673-33807838)
chr6 (98-193)||(29675589-29675684)
chr6 (201-311)||(5311273-5311383)
chr6 (182-311)||(31738357-31738486)
[»] chr1 (29 HSPs)
chr1 (43-240)||(26054962-26055158)
chr1 (97-273)||(9592270-9592446)
chr1 (201-311)||(14071215-14071325)
chr1 (155-240)||(36511297-36511382)
chr1 (181-310)||(47411440-47411569)
chr1 (184-312)||(14390251-14390379)
chr1 (188-319)||(3978030-3978161)
chr1 (52-240)||(49139866-49140058)
chr1 (182-240)||(19466198-19466256)
chr1 (181-311)||(25787156-25787286)
chr1 (182-310)||(21276989-21277117)
chr1 (201-320)||(13641242-13641361)
chr1 (201-312)||(25785961-25786072)
chr1 (182-240)||(36509876-36509934)
chr1 (199-240)||(14171278-14171319)
chr1 (96-195)||(34654247-34654346)
chr1 (114-197)||(40533526-40533609)
chr1 (139-197)||(12667222-12667280)
chr1 (182-240)||(22167844-22167902)
chr1 (182-240)||(26056140-26056198)
chr1 (50-195)||(51217728-51217878)
chr1 (97-203)||(51446749-51446854)
chr1 (59-101)||(51725548-51725590)
chr1 (138-191)||(33941431-33941484)
chr1 (237-310)||(52439333-52439406)
chr1 (224-311)||(2971692-2971780)
chr1 (201-305)||(13930687-13930791)
chr1 (201-253)||(14169671-14169723)
chr1 (201-309)||(47410980-47411088)
[»] chr4 (28 HSPs)
chr4 (42-311)||(44304830-44305101)
chr4 (59-309)||(27408759-27409009)
chr4 (59-312)||(31711085-31711338)
chr4 (63-310)||(52658906-52659154)
chr4 (180-312)||(33377355-33377487)
chr4 (181-324)||(33376199-33376342)
chr4 (182-311)||(86797-86926)
chr4 (131-314)||(21104252-21104435)
chr4 (182-304)||(35787797-35787919)
chr4 (62-195)||(43895490-43895623)
chr4 (114-311)||(46795951-46796148)
chr4 (156-311)||(15787469-15787624)
chr4 (155-253)||(34439626-34439724)
chr4 (223-317)||(37558986-37559080)
chr4 (110-253)||(38417605-38417748)
chr4 (182-240)||(34438471-34438529)
chr4 (203-311)||(10403431-10403538)
chr4 (182-310)||(38370277-38370405)
chr4 (50-101)||(2292356-2292407)
chr4 (139-190)||(41348354-41348405)
chr4 (201-308)||(55953864-55953971)
chr4 (157-203)||(8363354-8363400)
chr4 (157-203)||(26495227-26495273)
chr4 (141-197)||(35348908-35348964)
chr4 (219-311)||(37560329-37560421)
chr4 (139-195)||(43418143-43418199)
chr4 (127-195)||(52137539-52137607)
chr4 (157-197)||(56157046-56157086)
[»] chr2 (27 HSPs)
chr2 (43-240)||(6706991-6707186)
chr2 (43-170)||(23178688-23178816)
chr2 (43-170)||(23589945-23590073)
chr2 (39-240)||(40174612-40174815)
chr2 (122-309)||(23178815-23179002)
chr2 (122-309)||(23590072-23590259)
chr2 (42-195)||(14716046-14716201)
chr2 (59-319)||(10368254-10368515)
chr2 (43-150)||(12853987-12854090)
chr2 (95-203)||(1147854-1147962)
chr2 (59-240)||(12958481-12958664)
chr2 (59-310)||(37867751-37868003)
chr2 (110-253)||(3533547-3533690)
chr2 (59-222)||(4513623-4513786)
chr2 (201-312)||(4829458-4829569)
chr2 (96-195)||(4830582-4830681)
chr2 (59-240)||(11386689-11386870)
chr2 (182-310)||(23177668-23177797)
chr2 (182-310)||(23588925-23589054)
chr2 (97-203)||(4919932-4920037)
chr2 (216-312)||(42027186-42027282)
chr2 (182-233)||(14509281-14509332)
chr2 (276-322)||(12364173-12364219)
chr2 (115-192)||(42596673-42596750)
chr2 (110-186)||(2717699-2717775)
chr2 (156-240)||(21012047-21012131)
chr2 (255-307)||(37038266-37038317)
[»] chr5 (26 HSPs)
chr5 (128-308)||(1273086-1273266)
chr5 (39-311)||(5384193-5384468)
chr5 (53-307)||(22812249-22812505)
chr5 (71-227)||(19524060-19524216)
chr5 (97-195)||(8188108-8188206)
chr5 (182-312)||(42510107-42510237)
chr5 (201-307)||(26404222-26404328)
chr5 (37-90)||(15857475-15857528)
chr5 (139-240)||(15857568-15857669)
chr5 (59-311)||(12935972-12936224)
chr5 (182-317)||(5382930-5383065)
chr5 (129-212)||(5975849-5975932)
chr5 (208-310)||(18677971-18678073)
chr5 (181-240)||(10085837-10085896)
chr5 (139-202)||(10978226-10978289)
chr5 (201-308)||(27894035-27894142)
chr5 (121-176)||(33431881-33431936)
chr5 (172-310)||(19827123-19827261)
chr5 (242-320)||(30912299-30912377)
chr5 (176-234)||(38473542-38473600)
chr5 (201-311)||(42979442-42979552)
chr5 (53-90)||(1273305-1273342)
chr5 (167-204)||(9219280-9219317)
chr5 (115-192)||(14212117-14212194)
chr5 (138-195)||(18695596-18695653)
chr5 (267-311)||(328232-328276)
[»] scaffold0084 (1 HSPs)
scaffold0084 (42-208)||(11803-11969)
[»] scaffold0046 (1 HSPs)
scaffold0046 (42-195)||(24668-24821)
[»] scaffold0013 (1 HSPs)
scaffold0013 (59-313)||(96152-96406)
[»] scaffold0098 (1 HSPs)
scaffold0098 (131-243)||(42288-42400)
[»] scaffold1974 (1 HSPs)
scaffold1974 (182-312)||(621-751)
[»] scaffold1878 (1 HSPs)
scaffold1878 (182-312)||(523-653)
[»] scaffold0007 (1 HSPs)
scaffold0007 (201-308)||(145881-145988)
[»] scaffold0148 (1 HSPs)
scaffold0148 (142-194)||(15802-15854)
[»] scaffold0045 (1 HSPs)
scaffold0045 (217-305)||(77209-77297)


Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 16 - 422
Target Start/End: Original strand, 43931692 - 43932097
Alignment:
Q  16 gaaaaaataggaacattgtgttattgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatgg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43931692 gaaaaaataggaacattgtgttattgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatgtggtgatgg 43931791  T
Q  116 ttcactattgtgtataatggatct-gcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatg 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  43931792 ttcactattgtgtataatggatcttgcaatcgaatgattcaaatcatttcaaaaatgttagacattaaaaaactaacggaggggaccaaaatagtaaatg 43931891  T
Q  215 acagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcctagt 314  Q
    ||||||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  43931892 acagaaggtttatgggaccaaattgatacgtttaatagttagaggaccagagtgaaaataaaaaataaattaaggaaccaaatgatgtattaagcctagt 43931991  T
Q  315 ttttattatatttggttagcctttacattgtactacatta-ttatttttgactgattgagactttgccttttatattcagagcaagtgcctcctacagca 413  Q
    ||||||||||||| |||||| ||| | |||   ||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  43931992 ttttattatatttagttagcattttccttg---tacattatttttttttgactgattgagactttgccttttatattcagagcaaatgcctcctacaaca 43932088  T
Q  414 gagcatgct 422  Q
    |||||||||    
T  43932089 gagcatgct 43932097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 43 - 288
Target Start/End: Complemental strand, 14206936 - 14206690
Alignment:
Q  43 tgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaa--aaaattatatggtgatggttcactattgtgtataatggatctg 140  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||| |||    
T  14206936 tgaattttgtatgaatatcaagaagtggtggaaggaagaagatgaagagagggaaggaaaattatgtggtgatggttcactattgtatataatggacctg 14206837  T
Q  141 caatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||||||||| || |||| ||||||||||||||| | ||||||||||||||||||   | |||||||||||| |||||||||||||| |||||| |||||    
T  14206836 caatcgaatggttgaaattatatcagaaatgttaca-attaaaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattga 14206738  T
Q  241 tacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaag 288  Q
     || ||| ||||| ||   |||| ||||||||  ||||||||||||||    
T  14206737 aacattttatagttaggcgaccaaagtgaaaaccaaaaataaattaag 14206690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 43 - 288
Target Start/End: Complemental strand, 14215626 - 14215380
Alignment:
Q  43 tgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaa--aaaattatatggtgatggttcactattgtgtataatggatctg 140  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||| |||    
T  14215626 tgaattttgtatgaatatcaagaagtggtggaaggaagaagatgaagagagggaaggaaaattatgtggtgatggttcactattgtatataatggacctg 14215527  T
Q  141 caatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||||||||| || |||| ||||||||||||||| | ||||||||||||||||||   | |||||||||||| |||||||||||||| |||||| |||||    
T  14215526 caatcgaatggttgaaattatatcagaaatgttaca-attaaaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattga 14215428  T
Q  241 tacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaag 288  Q
     || ||| ||||| ||   |||| ||||||||  ||||||||||||||    
T  14215427 aacattttatagttaggcgaccaaagtgaaaaccaaaaataaattaag 14215380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 37 - 311
Target Start/End: Original strand, 13446506 - 13446780
Alignment:
Q  37 tattgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatgga 136  Q
    ||||||| |||| |||||||| |||| ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||| |||| ||||    
T  13446506 tattgataaattttgtatgaatatgatgaagtggtggaaggatgaagatgaagagaggaaaaaaattatgtggtgatggttcactgttgtatatattgga 13446605  T
Q  137 tctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccaca 236  Q
      |||||||||||| || ||||||||| |||||||||| |||||||||||||||||||| | | ||| ||| |||| | ||||||||||||||||||| |    
T  13446606 catgcaatcgaatggttgaaatcatatgagaaatgttacacattaaaaaactaacggagaggaccaatataataaacggcagaagatttatgggaccaaa 13446705  T
Q  237 ttgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    |||| ||  |  |||||   ||||||| ||||||||  |||||||| |||||  | |||||||||||||||||||    
T  13446706 ttgagacactatatagttgaagaaccaaagtgaaaaccaaaaataagttaagtgaccaaatgatgtattaagcct 13446780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 62 - 310
Target Start/End: Complemental strand, 25153901 - 25153653
Alignment:
Q  62 aagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcat 161  Q
    ||||||||||||||||||||||| ||||| |||||||||||||  || || ||||||| | | ||  ||||| || ||||||||||| | |  ||| |||    
T  25153901 aagaagtggtggaaggaagaagaagaagaaagggaaaaaattaggtgttggtggttcagtgtggtacataatagacctgcaatcgaacggtcgaaaacat 25153802  T
Q  162 atcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaac 261  Q
    |||| |||| ||||| ||||||||||  |||||    | |||||  ||||| |  |||||||||||||||||| ||||| ||  || ||||| || | ||    
T  25153801 atcaaaaatattagatattaaaaaacacacggacaagaccaaaacggtaaacggaagaagatttatgggaccaaattgagacactttatagttaggggac 25153702  T
Q  262 cagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
    || | |||||||  ||||||| |||||  | ||||||||||||||||||    
T  25153701 caaattgaaaatcgaaaataagttaagggaccaaatgatgtattaagcc 25153653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 201 - 308
Target Start/End: Complemental strand, 43930423 - 43930316
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| |||||||||||||| |||||| ||||| |||||||||||| || | |||| ||||||||| |||||||| |||||  | ||||||||    
T  43930423 caaaatagtaaacgacagaagatttataggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataagttaagggaccaaatgat 43930324  T
Q  301 gtattaag 308  Q
     |||||||    
T  43930323 atattaag 43930316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 309
Target Start/End: Original strand, 4858311 - 4858464
Alignment:
Q  156 aatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtca 255  Q
    |||||||| | |||| |||||||| ||||||||||  ||| | || |||||||||||  |||||||||||||||||||| ||||| || ||| ||||| |    
T  4858311 aatcatattaaaaatattagacatcaaaaaactaatagagaggattaaaatagtaaacaacagaagatttatgggaccaaattgagacattttatagtta 4858410  T
Q  256 gagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagc 309  Q
    | | | || ||||||||  |||||||| |||||  | |||||||||||||||||    
T  4858411 ggggatcaaagtgaaaactaaaaataagttaagggaccaaatgatgtattaagc 4858464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 192
Target Start/End: Complemental strand, 25532410 - 25532257
Alignment:
Q  39 ttgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatc 138  Q
    ||||||||||  ||||||| ||||||||||||| |||| ||||||||||||  ||| |||||||||  || ||  ||| ||   ||   ||||||||| |    
T  25532410 ttgatgaatttggtatgaatatgaagaagtggtagaagaaagaagatgaaggaaggaaaaaaattacgtgttggcggtacaaggttaaatataatggacc 25532311  T
Q  139 tgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacg 192  Q
    |||||||||||| || ||||||||||| |||| ||| |||||||||||||||||    
T  25532310 tgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacg 25532257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 22061808 - 22061917
Alignment:
Q  202 aaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatg 301  Q
    ||||||||||| | || |||||||||||||||| ||||| |||||| ||||| || | |||| | |||||| | ||||||| |||||  |  ||||||||    
T  22061808 aaaatagtaaacggcataagatttatgggaccaaattgagacgttttatagttaggggaccaaattgaaaacacaaaataagttaagggacaaaatgatg 22061907  T
Q  302 tattaagcct 311  Q
    ||||||||||    
T  22061908 tattaagcct 22061917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 311
Target Start/End: Complemental strand, 41515187 - 41514992
Alignment:
Q  114 ggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaat 213  Q
    |||||||||||   |||||||||  ||||||| |||| || ||||||||| | |||  ||||||||||||||| |||||||| ||| || |||||||||     
T  41515187 ggttcactattaaatataatggacatgcaatcaaatggttaaaatcatataaaaaactttagacattaaaaaattaacggagagaaccacaatagtaaac 41515088  T
Q  214 gacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
        ||||| ||||||||||| ||||| ||  || ||||| || |||||| | | ||||  ||||||||||||||  | |||||||| ||||||||||    
T  41515087 atatgaagacttatgggaccaaattgaaacactttatagttag-gaaccaaaattaaaaccaaaaataaattaaggga-caaatgatatattaagcct 41514992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 318
Target Start/End: Original strand, 43007641 - 43007778
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaat 280  Q
    |||| |||||||||| |||  ||||||||||| |||| |||| ||||||||||| ||||| ||  || ||||| |||| |||| | ||||||| ||||||    
T  43007641 aaaatactaacggagagaactaaaatagtaaacgacataagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaatcaaaaat 43007740  T
Q  281 aaattaagaaatcaaatgatgtattaagcctagttttt 318  Q
    || || |   | |||||||| ||||||||||| |||||    
T  43007741 aagttgaaggaccaaatgatatattaagcctaattttt 43007778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 306
Target Start/End: Complemental strand, 4857324 - 4857200
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    |||||||||||||| | |  |||| |||||| | |||||||||| |||||||| || || || ||| ||||| || | |||| ||||||||  |||||||    
T  4857324 aaaaactaacggagaggactaaaacagtaaacggcagaagatttgtgggaccaaatcgagacattttatagttaggggaccaaagtgaaaaccaaaaata 4857225  T
Q  282 aattaagaaatcaaatgatgtatta 306  Q
    | |||||  ||||||||||||||||    
T  4857224 agttaagggatcaaatgatgtatta 4857200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 310
Target Start/End: Original strand, 28326315 - 28326510
Alignment:
Q  114 ggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaat 213  Q
    |||||||||||   |||||||||  ||||||| |||| || ||||||||| | |||  |||||||||||||||||||||||| | | || |||||||||     
T  28326315 ggttcactattaaatataatggacatgcaatcaaatggttaaaatcatattaaaaaatttagacattaaaaaactaacggagaggaccacaatagtaaac 28326414  T
Q  214 gacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
    |   ||||| |||| | |||| ||||| ||  || ||||||||   |||| | | ||||  ||||||||||||||  ||||||| ||||||||||||    
T  28326415 ggaggaagacttatagaaccaaattgagacactttatagtcaggagaccaaaat-aaaaccaaaaataaattaagggatcaaataatgtattaagcc 28326510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 240
Target Start/End: Original strand, 24873467 - 24873648
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaat 158  Q
    |||||||||||||| ||||||||| ||||||   |||||||||||| ||| || |||||||   | || || |||| | | |||||| |||| || |||     
T  24873467 atgaagaagtggtgaaaggaagaatatgaagcttgggaaaaaattagatgttggtggttcagcgtggtatacaatgaaccagcaatcaaatggttgaaac 24873566  T
Q  159 catatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
     |||||| ||||  || |||||||||||| ||||||    | |||||| ||||| | ||||||| ||||||||||| |||||    
T  24873567 aatatcaaaaatagtaaacattaaaaaacaaacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattga 24873648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 40930504 - 40930411
Alignment:
Q  219 aagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagccta 312  Q
    |||||||||||||||| ||||| ||  || ||||| || | |||| ||||||||  |||||||||| |||  |||||| |||||||||||||||    
T  40930504 aagatttatgggaccaaattgaaacactttatagttaggggaccaaagtgaaaaccaaaaataaatcaagggatcaaacgatgtattaagccta 40930411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 43111679 - 43111634
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagggaaaaaatta 104  Q
    ||||||||||| |||||||||||||||||||| |||| ||||||||    
T  43111679 atgaagaagtgatggaaggaagaagatgaagaaaggggaaaaatta 43111634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 17288149 - 17288249
Alignment:
Q  96 aaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    |||||||||  || ||| |||||||||||   || ||||||  ||||||| |||  || ||||||||||| |||  ||||||||||||||||||||||||    
T  17288149 aaaaaattaggtgctgacggttcactattaaatacaatggacatgcaatcaaatagttaaaatcatatcaaaaaatttagacattaaaaaactaacggag 17288248  T
Q  196 g 196  Q
    |    
T  17288249 g 17288249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 24494231 - 24494179
Alignment:
Q  52 tatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaatta 104  Q
    |||||| |||||||| || |||||||||||||||||||| | |||||||||||    
T  24494231 tatgaatatgaagaattgatggaaggaagaagatgaagaaatggaaaaaatta 24494179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 308
Target Start/End: Original strand, 19279624 - 19279731
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| |||| || ||||||||||||| ||||| ||  || ||||| || | |||| ||||||||  |||||||| |||||  | |||| |||    
T  19279624 caaaatagtaaacgacaaaaaatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaacgat 19279723  T
Q  301 gtattaag 308  Q
    ||||||||    
T  19279724 gtattaag 19279731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 22746312 - 22746371
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||| |||||||||| | |||||||||||||| | || |||||||||||||||| |||||    
T  22746312 aaaatactaacggagaggatcaaaatagtaaacggcacaagatttatgggaccaaattga 22746371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 1970896 - 1970806
Alignment:
Q  222 atttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagccta 312  Q
    ||||||||||||| ||||| ||  || ||||| |  |||||| ||| ||||  ||||||||||||||| | || |||||||||||||||||    
T  1970896 atttatgggaccaaattgaaacactttatagttaaggaaccaaagtaaaaaccaaaaataaattaagagaccagatgatgtattaagccta 1970806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 324
Target Start/End: Original strand, 18802342 - 18802524
Alignment:
Q  142 aatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgat 241  Q
    ||||||||| ||  |||||||| | ||||  ||||||| |||||||| |||| |  ||  |||||||| || || |||| ||||||||||| | |||||     
T  18802342 aatcgaatggttataatcatattaaaaatactagacatcaaaaaactgacggcgataactaaaatagtgaacgatagaaaatttatgggactaaattgag 18802441  T
Q  242 acgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcctagtttttattata 324  Q
    ||  || ||||| || | | || | |||||| ||||||||| |||||  | |||||||||||||||| ||| ||| |||||||    
T  18802442 acactttatagttaggggatcaaaatgaaaacaaaaaataagttaagggaccaaatgatgtattaagtctaatttatattata 18802524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 310
Target Start/End: Original strand, 40926486 - 40926640
Alignment:
Q  156 aatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtca 255  Q
    |||||||| | |||| ||||||||||||||  |||||||| | | |||||  ||||| |  |||| |||||| |||||| ||||| ||  || ||||| |    
T  40926486 aatcatattaaaaatattagacattaaaaagttaacggagaggaccaaaacggtaaacggtagaaaatttataggaccaaattgagacactttatagtta 40926585  T
Q  256 gagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
    | | |||| ||||||||  |||||||| |||||  |  |||||||||||||||||    
T  40926586 ggggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaagcc 40926640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 310
Target Start/End: Complemental strand, 22744850 - 22744741
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| | || ||||||||| |||||| ||||| ||  || ||||| || | || | | ||||||| |||||||| |||||  | ||||||||    
T  22744850 caaaatagtaaacggcataagatttataggaccaaattgaaacactttatagttaggggactaaattgaaaatcaaaaataagttaagggaccaaatgat 22744751  T
Q  301 gtattaagcc 310  Q
    ||||||||||    
T  22744750 gtattaagcc 22744741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 35296752 - 35296821
Alignment:
Q  126 tgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    |||||||||||  ||||||| || | || ||||||||||| |||  ||||||||||||||| ||||||||    
T  35296752 tgtataatggacatgcaatcaaacggttaaaatcatatcaaaaaatttagacattaaaaaattaacggag 35296821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 43936132 - 43936185
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggacca 234  Q
    ||||||||||||||| | | |||||||||||| ||||||||| ||||| |||||    
T  43936132 aaaaaactaacggagaggaccaaaatagtaaacgacagaagaattatgagacca 43936185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 10956012 - 10955956
Alignment:
Q  141 caatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggaggg 197  Q
    ||||| |||| || |||||| |||| |||| |||||||||||||| |||||||||||    
T  10956012 caatcaaatggttaaaatcaaatcaaaaattttagacattaaaaatctaacggaggg 10955956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 26146670 - 26146718
Alignment:
Q  155 aaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaa 203  Q
    ||||||||||| |||  ||||||||||||||| |||||||||| |||||    
T  26146670 aaatcatatcaaaaagtttagacattaaaaaaataacggaggggatcaa 26146718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 312
Target Start/End: Complemental strand, 43006510 - 43006378
Alignment:
Q  180 taaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaa 279  Q
    ||||| ||||||||||   | |||||||| ||| | || |||| ||| ||||||| ||||| ||  |||||||| || | |||| | ||||||  |||||    
T  43006510 taaaatactaacggagatgaccaaaatagcaaacggcataagacttaggggaccaaattgagacacttaatagttaggggaccaaattgaaaaccaaaaa 43006411  T
Q  280 taaattaagaaatcaaatgatgtattaagccta 312  Q
    ||| |||||  | ||||||||||||||||||||    
T  43006410 taagttaagggaccaaatgatgtattaagccta 43006378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 13 - 311
Target Start/End: Original strand, 25585656 - 25585955
Alignment:
Q  13 aaagaaaaaataggaacattgtgttattgatgaattatgtatgaacatgaagaagtggtggaa-ggaagaagatgaagagagggaaaaaattatatggtg 111  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  25585656 aaagaaaaaataggaatattgtgttattgatgaattatgtatgaacatgaagaagtggtggaaaggaagaagatgaagagagggaaaaaattatgtggtg 25585755  T
Q  112 atggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaa 211  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |  ||||||||||    
T  25585756 atggttcactattgtatataatggatctgcaatcgaatggttcaaatcatatcagaaatgttagacattaaaaaactaacggagatgactaaaatagtaa 25585855  T
Q  212 atgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    | ||||||||||||||| ||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||||||  | ||||| || ||||||||||    
T  25585856 acgacagaagatttatgagaccaaattgagacgtttaatagttagaggaccagagtgaaaataaaaaataaattaagggaccaaataatatattaagcct 25585955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 39 - 310
Target Start/End: Original strand, 32980300 - 32980573
Alignment:
Q  39 ttgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaa--ttatatggtgatggttcactattgtgtataatgga 136  Q
    |||||||||| ||||| |||||||| ||| ||||||||||| |||||||||||||||||||||  |||| |||||||||||||||||||| |||||||||    
T  32980300 ttgatgaattttgtataaacatgaaaaagcggtggaaggaaaaagatgaagagagggaaaaaaaattatgtggtgatggttcactattgtatataatgga 32980399  T
Q  137 tctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccaca 236  Q
     ||||||||||||| || ||||||||||| |||||||||| ||||||||||||||||||   | |||||||||||| | |||||||||||| |||||| |    
T  32980400 cctgcaatcgaatggttgaaatcatatcaaaaatgttagaaattaaaaaactaacggagatgaccaaaatagtaaacggcagaagatttataggaccaaa 32980499  T
Q  237 ttgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
    |||| ||  ||  |||| || | |||| | |||||| | ||||||| ||||   |||||||||| |||||||||    
T  32980500 ttgagacactttgtagttaggggaccaaattgaaaacagaaaataagttaatggatcaaatgatatattaagcc 32980573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 43 - 311
Target Start/End: Original strand, 11220513 - 11220780
Alignment:
Q  43 tgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgca 142  Q
    |||||| |||||||| |||| |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| |||||    
T  11220513 tgaattttgtatgaatatga-gaaggggtggaaggaagaagatgaagaaagggaaaaaattatgtggtgatggttcactactgtatataatggacctgca 11220611  T
Q  143 atcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgata 242  Q
    ||  |||| || |||| |||||| |||| || ||||||||||||| ||||||||| | |||||||||||| |||||||||||||| |||||| ||||| |    
T  11220612 atataatggttgaaattatatcataaatatttgacattaaaaaacaaacggaggggaccaaaatagtaaacgacagaagatttataggaccaaattgaga 11220711  T
Q  243 cgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    |  || ||||| || | |||| | ||||| | |||||||| |||||  | ||||  |||||||||||||    
T  11220712 cactttatagttaggggaccaaaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 11220780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 43345496 - 43345371
Alignment:
Q  128 tataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttat 227  Q
    |||||| || ||||||||||||| ||  |||||||||| |||| ||| ||||||||||||||||||||  || |||||| ||||| || |||||||||||    
T  43345496 tataatagacctgcaatcgaatggttggaatcatatcaaaaatattaaacattaaaaaactaacggagaaaaccaaaatggtaaacgagagaagatttat 43345397  T
Q  228 gggaccacattgatacgtttaatagt 253  Q
    ||||||| ||||| || ||| |||||    
T  43345396 gggaccaaattgaaacattttatagt 43345371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 8371343 - 8371213
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    |||||||||||||| | | ||||||||||||   |||||||||||||| |||| ||||| || ||| ||||| || | |||| | |||||| ||||||||    
T  8371343 aaaaactaacggagaggaccaaaatagtaaactgcagaagatttatggaaccaaattgagacattttatagttaggggaccaaaatgaaaacaaaaaata 8371244  T
Q  282 aattaagaaatcaaatgatgtattaagccta 312  Q
    | |||||  ||||||||||||||||||||||    
T  8371243 agttaagggatcaaatgatgtattaagccta 8371213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 310
Target Start/End: Complemental strand, 25583218 - 25583109
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| | ||||||| ||||||||||| ||||| |||||||||||| || | |||| ||||||||| |||||||| |||||  |  |||||||    
T  25583218 caaaatagtaaacggcagaagacttatgggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataagttaagggactaaatgat 25583119  T
Q  301 gtattaagcc 310  Q
    ||||||||||    
T  25583118 gtattaagcc 25583109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 8372555 - 8372639
Alignment:
Q  128 tataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaa 212  Q
    ||||||||| ||||||||||||| || ||||||||||| |||| ||| |||||||||||||||||||||  | ||||||||||||    
T  8372555 tataatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggtgaccaaaatagtaaa 8372639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 7921595 - 7921662
Alignment:
Q  141 caatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatag 208  Q
    |||||||||| || ||||||||||| |||| |||||||||||||||||||||||| | ||||||||||    
T  7921595 caatcgaatggttgaaatcatatcaaaaatattagacattaaaaaactaacggagaggatcaaaatag 7921662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 17345476 - 17345420
Alignment:
Q  139 tgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    |||||||||||| |||||||||||| | |||| ||||||||||||||||||||||||    
T  17345476 tgcaatcgaatggttcaaatcatattaaaaatattagacattaaaaaactaacggag 17345420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 309
Target Start/End: Original strand, 13077963 - 13078071
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| |||| |||||||||||||||| ||| | || ||| ||| | |||| |||| | ||||||| |||||||| |||||| | | ||| ||    
T  13077963 caaaatagtaaacgacataagatttatgggaccaaattaagacattttatacttagaggaccaaattgaaaatcaaaaataagttaagagacctaataat 13078062  T
Q  301 gtattaagc 309  Q
    |||||||||    
T  13078063 gtattaagc 13078071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 42633898 - 42634008
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    ||||||| |||| |||| |||||||||||||||| ||||| ||  |  ||||| || | |||| | ||||||| |||||||| |||||  | ||||||||    
T  42633898 caaaataataaacgacataagatttatgggaccaaattgagacactctatagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgat 42633997  T
Q  301 gtattaagcct 311  Q
    |||||||||||    
T  42633998 gtattaagcct 42634008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 51825633 - 51825743
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| ||||||||||||||||||||| ||||| ||  || ||||| |  | |||| |||||||   |||||||| |||||  | ||||||||    
T  51825633 caaaatagtaaacgacagaagatttatgggaccaaattgaaacactttatagttaagggaccaaagtgaaatccaaaaataagttaagggaccaaatgat 51825732  T
Q  301 gtattaagcct 311  Q
     ||||||||||    
T  51825733 atattaagcct 51825743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 14744275 - 14744176
Alignment:
Q  95 gaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacgga 194  Q
    ||||||||||  || ||||||||||||||  |||||||||||  ||||||| |  | || ||||||||||| |||  ||||||||||||||| |||||||    
T  14744275 gaaaaaattaggtgctgatggttcactata-tgtataatggacatgcaatcaatcggttaaaatcatatcaaaaaatttagacattaaaaaattaacgga 14744177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 310
Target Start/End: Original strand, 26798899 - 26799027
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    |||||||||||||| | | |||||| ||||| |   ||||| ||||||||||| ||||| || ||| ||||| || | |||| | | ||||  |||||||    
T  26798899 aaaaactaacggagaggaccaaaatggtaaacggaggaagaattatgggaccaaattgagacattttatagttaggggaccaaaataaaaaccaaaaata 26798998  T
Q  282 aattaagaaatcaaatgatgtattaagcc 310  Q
    | |||||| | ||||||||||||||||||    
T  26798999 agttaagagaccaaatgatgtattaagcc 26799027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 195
Target Start/End: Original strand, 10339896 - 10339995
Alignment:
Q  96 aaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    |||||||||| || ||| |||||||| ||   || ||||||  | ||||| |||| ||||||||| |||| |||  ||||||||||||||||||||||||    
T  10339896 aaaaaattatgtgctgacggttcactgttaaatacaatggacattcaatcaaatggttcaaatcaaatcaaaaaatttagacattaaaaaactaacggag 10339995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 29536838 - 29536779
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    ||||| ||||||||| | | |||||||||||| || |||||||||||||||||| |||||    
T  29536838 aaaaagctaacggagaggaccaaaatagtaaacgaaagaagatttatgggaccaaattga 29536779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 312
Target Start/End: Original strand, 49334329 - 49334460
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaat 280  Q
    ||||||||||| |||   |||||||||||||| |  ||||||||||| |||||| ||||| ||  || ||||| | || |||| | |||||| |||||||    
T  49334329 aaaaaactaacagagatgatcaaaatagtaaacggtagaagatttatcggaccatattgagacaatttatagttaaaggaccaaaatgaaaacaaaaaat 49334428  T
Q  281 aaattaagaaatcaaatgatgtattaagccta 312  Q
    || | ||   || |||||||||||||||||||    
T  49334429 aagtcaaaggattaaatgatgtattaagccta 49334460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 310
Target Start/End: Original strand, 54653964 - 54654087
Alignment:
Q  187 ctaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaatta 286  Q
    ||||||||| | | |||||||||||| ||||||||| ||||||||||| ||||| ||  || ||||| |  | |||| | |||||   |||||||| |||    
T  54653964 ctaacggagaggaccaaaatagtaaacgacagaagaattatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagtta 54654063  T
Q  287 agaaatcaaatgatgtattaagcc 310  Q
    ||  | ||||||||||||||||||    
T  54654064 agggaccaaatgatgtattaagcc 54654087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 23559942 - 23559884
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||||||||||||| | | |||||||||||| ||||||||| |||||||| || |||||    
T  23559942 aaaaactaacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattga 23559884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 41387425 - 41387555
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaat 280  Q
    |||| |||||||||| | | |||||||||||| |    ||| |||||||||||| ||||| || ||| ||||| || | |||| | ||||||  ||||||    
T  41387425 aaaatactaacggagaggaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaat 41387524  T
Q  281 aaattaagaaatcaaatgatgtattaagcct 311  Q
    || |||||  | |||||||||||||||||||    
T  41387525 aagttaagggaccaaatgatgtattaagcct 41387555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 48338170 - 48338240
Alignment:
Q  242 acgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagccta 312  Q
    ||||||||||||||| |||||| | ||||||   ||||||| |||||  | ||||||||||||||||||||    
T  48338170 acgtttaatagtcagggaaccaaattgaaaactgaaaataagttaagggaccaaatgatgtattaagccta 48338240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 49380919 - 49380965
Alignment:
Q  157 atcatatcagaaatgttagacattaaaaaactaacggagggaatcaa 203  Q
    ||||||||| |||| ||| |||||||||||||||||||||| |||||    
T  49380919 atcatatcaaaaattttaaacattaaaaaactaacggaggggatcaa 49380965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 310
Target Start/End: Complemental strand, 7820514 - 7820385
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaat 280  Q
    ||||||||||||||| | | ||||| |||||| |||| || ||||||||| ||| ||||| ||  || ||||| |||| |||| | ||||| | ||||||    
T  7820514 aaaaaactaacggagaggaccaaaacagtaaacgacataaaatttatgggtccaaattgaaacactttatagttagaggaccaaaatgaaattcaaaaat 7820415  T
Q  281 aaattaagaaatcaaatgatgtattaagcc 310  Q
    || |||||  | ||||  ||||||||||||    
T  7820414 aagttaagggaccaaagcatgtattaagcc 7820385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 20486175 - 20486122
Alignment:
Q  138 ctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaac 191  Q
    |||||||| ||||||| ||||||||| | || | ||||||||||||||||||||    
T  20486175 ctgcaatcaaatgattaaaatcatattaaaagttttagacattaaaaaactaac 20486122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 310
Target Start/End: Complemental strand, 42632830 - 42632701
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaat 280  Q
    |||| |||||||||| | |  ||||||||||| |||| ||||||||||||| || ||||| ||  || ||||| || | |||| | ||||||  |||| |    
T  42632830 aaaatactaacggagaggactaaaatagtaaacgacataagatttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaagt 42632731  T
Q  281 aaattaagaaatcaaatgatgtattaagcc 310  Q
    || |||||  | ||||||||||||||||||    
T  42632730 aagttaagggaccaaatgatgtattaagcc 42632701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 10301722 - 10301822
Alignment:
Q  96 aaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    |||||||||| || |||||||||||| ||   || ||||||  | ||||| |||| || |||||| |||| |||  |||||||||||||||||||| |||    
T  10301722 aaaaaattatgtgctgatggttcactgttaaatacaatggacattcaatcaaatggttaaaatcaaatcaaaaaatttagacattaaaaaactaacagag 10301821  T
Q  196 g 196  Q
    |    
T  10301822 g 10301822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 310
Target Start/End: Original strand, 10987686 - 10987774
Alignment:
Q  222 atttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
    ||||||||||||| ||||| ||  || ||||| || | |||| | ||||||  |||||||| |||||  ||||||||||||||||||||    
T  10987686 atttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggatcaaatgatgtattaagcc 10987774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 303
Target Start/End: Complemental strand, 43102000 - 43101896
Alignment:
Q  199 atcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatg 298  Q
    |||||||||||||  ||||||||| ||||||||||| ||||| ||  || ||| | |||| |||| | ||||||  |||||||| |||||  | ||||||    
T  43102000 atcaaaatagtaagcgacagaagaattatgggaccaaattgagacactttataattagaggaccaaaatgaaaaccaaaaataagttaagggaccaaatg 43101901  T
Q  299 atgta 303  Q
    |||||    
T  43101900 atgta 43101896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 48253099 - 48253043
Alignment:
Q  139 tgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    ||||||| |||| || |||||| |||| |||  ||||||||||||||||||||||||    
T  48253099 tgcaatcaaatggttaaaatcacatcaaaaaatttagacattaaaaaactaacggag 48253043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 53809443 - 53809499
Alignment:
Q  139 tgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    ||||||| |||| || |||| |||||| |||  ||||||||||||||||||||||||    
T  53809443 tgcaatcaaatggttaaaattatatcaaaaaatttagacattaaaaaactaacggag 53809499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 3e-64; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 37 - 240
Target Start/End: Complemental strand, 37275156 - 37274952
Alignment:
Q  37 tattgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaa-ttatatggtgatggttcactattgtgtataatgg 135  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| |||| |||    
T  37275156 tattgatgaattttgtatgaatatgaagaagtggtggaaggaagaagatgaagagagggaaaaaaattatgtggtgatggttcactgttgtatatattgg 37275057  T
Q  136 atctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccac 235  Q
    |  |||||||||||| || |||||||||||||||||||| |||||||||||||||||||| | | |||||||||||| | |||||||||||||||| ||     
T  37275056 acatgcaatcgaatggttgaaatcatatcagaaatgttatacattaaaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaacaa 37274957  T
Q  236 attga 240  Q
    |||||    
T  37274956 attga 37274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 59 - 312
Target Start/End: Original strand, 29739512 - 29739766
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagg-gaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaa 157  Q
    |||||||||||||||||||||||||||||||| |||  |||||||||  || || ||||||| | | || ||||||||| || |||||||| | |  |||    
T  29739512 atgaagaagtggtggaaggaagaagatgaagaaaggaaaaaaaattaggtgttggtggttcagtgtggtatataatggacctacaatcgaacggtcgaaa 29739611  T
Q  158 tcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcaga 257  Q
     ||||||| |||| ||| |||||||||||| ||||||    | |||||| ||||| |  |||| ||||||||||||| ||||| ||  || ||||| ||     
T  29739612 acatatcaaaaatattaaacattaaaaaacaaacggacatgaccaaaatggtaaacggaagaaaatttatgggaccaaattgagacactttatagttagg 29739711  T
Q  258 gaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagccta 312  Q
    | | || | ||||||  ||||||||||||||| | ||||||||||||||||||||    
T  29739712 ggatcaaattgaaaaccaaaaataaattaagagaccaaatgatgtattaagccta 29739766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 96 - 309
Target Start/End: Original strand, 36939940 - 36940153
Alignment:
Q  96 aaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    ||||||| | ||| || |||||||||||| | || |||||| ||||||||||||| || ||| ||||||| || | ||||| ||||||||| ||||||||    
T  36939940 aaaaaatcagatgttggtggttcactattatatacaatggacctgcaatcgaatggttgaaaccatatcaaaattattagatattaaaaaattaacggag 36940039  T
Q  196 ggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaa 295  Q
       | |||||||||||| | |||||||||||||  |||| ||||| ||  || ||||| || | | || ||||||||  |||||||| |||||  | |||    
T  36940040 atgaccaaaatagtaaacggcagaagatttatgataccaaattgaaacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaa 36940139  T
Q  296 atgatgtattaagc 309  Q
    ||||||||||||||    
T  36940140 atgatgtattaagc 36940153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 310
Target Start/End: Original strand, 35945306 - 35945558
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaag--agagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaa 156  Q
    ||||||||||||||||||||| |||||||||  |||  ||||||||||  || ||| ||| |||| |    ||||||||| ||||||||||||| || ||    
T  35945306 atgaagaagtggtggaaggaataagatgaaggaagaaagaaaaaattaggtgttgacggtacactgtaaa-tataatggacctgcaatcgaatggttgaa 35945404  T
Q  157 atcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcag 256  Q
    |||| |||| |||| ||| |||||||||||||||   |||| | ||||||||||||   |||||||| |||||||||| | ||| || ||| ||||| |     
T  35945405 atcacatcaaaaatattaaacattaaaaaactaatccaggggaccaaaatagtaaactgcagaagatatatgggaccaaagtgagacattttatagttaa 35945504  T
Q  257 agaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
     | || | | |||||| ||||||||| |||||  | ||||| ||||||||||||    
T  35945505 gggactaaaatgaaaacaaaaaataagttaagggaccaaataatgtattaagcc 35945558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 36070282 - 36070171
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| | |||||||||||||||| || ||||| ||  || ||||| || | |||| | ||||||  ||||||||||||||  ||||||||||    
T  36070282 caaaatagtaaacggcagaagatttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataaattaagggatcaaatgat 36070183  T
Q  301 gtattaagccta 312  Q
    ||||||||||||    
T  36070182 gtattaagccta 36070171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 34616403 - 34616245
Alignment:
Q  37 tattgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaa-aaaattatatggtgatggttcactattgtgtataatgg 135  Q
    ||||||||||||  ||||||| ||||||||||||| |||||||||||||||||| | | || |||||||  || ||  | | |||  ||   |||||| |    
T  34616403 tattgatgaatttggtatgaatatgaagaagtggtagaaggaagaagatgaagaaaagaaataaaattagttgttggcgatccaccgttaaatataatag 34616304  T
Q  136 atctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacgga 194  Q
    | ||||||||||||| || ||||||||| | |||| ||| |||||||||||||||||||    
T  34616303 acctgcaatcgaatggttgaaatcatattaaaaatattaaacattaaaaaactaacgga 34616245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 37473912 - 37474033
Alignment:
Q  67 gtggtggaaggaagaagatgaagagagggaaaaaa--ttatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatc 164  Q
    |||||||||||||||||||||||| ||||||||||  |||  || || ||||||| | | || || |||||||||||||||||||| |  |||  |||||    
T  37473912 gtggtggaaggaagaagatgaagaaagggaaaaaaaattaggtgttggtggttcaatgtggtatacaatggatctgcaatcgaatggtcaaaacaatatc 37474011  T
Q  165 agaaatgttagacattaaaaaa 186  Q
    | |||| |||||||||||||||    
T  37474012 aaaaatattagacattaaaaaa 37474033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 13514729 - 13514871
Alignment:
Q  52 tatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatga 151  Q
    |||||| ||||| | ||| |||||||||||||||||||| ||||||||| |||  || || ||| ||| | |||| || ||| ||  ||||||||||||     
T  13514729 tatgaatatgaaaacgtgatggaaggaagaagatgaagaaagggaaaaa-ttagctgttggtggctcattgttgtatacaatagacatgcaatcgaatgg 13514827  T
Q  152 ttcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    || |||| |||||| |||  |||| |||||||||||||||||||    
T  13514828 tttaaattatatcaaaaacattagtcattaaaaaactaacggag 13514871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 13604262 - 13604404
Alignment:
Q  52 tatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatga 151  Q
    |||||| ||||| | ||| |||||||||||||||||||| ||||||||| |||  || || ||| ||| | |||| || ||| ||  ||||||||||||     
T  13604262 tatgaatatgaaaacgtgatggaaggaagaagatgaagaaagggaaaaa-ttagctgttggtggctcattgttgtatacaatagacatgcaatcgaatgg 13604360  T
Q  152 ttcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    || |||| |||||| |||  |||| |||||||||||||||||||    
T  13604361 tttaaattatatcaaaaacattagtcattaaaaaactaacggag 13604404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 42314864 - 42314934
Alignment:
Q  237 ttgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaa 307  Q
    |||| |||||||||||| || ||| || | |||||||| ||||||||||||| ||||||||||||||||||    
T  42314864 ttgaaacgtttaatagttagggaatcaaattgaaaatagaaaataaattaaggaatcaaatgatgtattaa 42314934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 43277933 - 43278043
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| | || |||||||| ||||||| ||||| || ||| ||||| || | |||| | | |||||||||||||| |||||  ||||||||||    
T  43277933 caaaatagtaaacggcataagatttacgggaccaaattgagacattttatagttaggggaccaaattaaaaataaaaaataagttaagggatcaaatgat 43278032  T
Q  301 gtattaagcct 311  Q
     ||||||||||    
T  43278033 atattaagcct 43278043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 16362586 - 16362529
Alignment:
Q  138 ctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    ||||||||||| | || ||||||||||| |||| ||||||||||||||||||||||||    
T  16362586 ctgcaatcgaacggttgaaatcatatcaaaaatattagacattaaaaaactaacggag 16362529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 310
Target Start/End: Original strand, 38591019 - 38591128
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| | || |||||||||||||||| ||||| ||  || ||||| || | |||| | ||||||| |||||||| |||||  | ||||||||    
T  38591019 caaaatagtaaacggcataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgat 38591118  T
Q  301 gtattaagcc 310  Q
    ||||||||||    
T  38591119 gtattaagcc 38591128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 37323435 - 37323343
Alignment:
Q  218 gaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
    |||||||||||||| || ||||| || ||| ||||| || |||||| | ||||||  ||||||||||||||  | ||||||||||||||||||    
T  37323435 gaagatttatgggatcaaattgagacattttatagttagggaaccaaattgaaaaccaaaaataaattaagggaccaaatgatgtattaagcc 37323343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 311
Target Start/End: Complemental strand, 38589926 - 38589815
Alignment:
Q  199 atcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatg 298  Q
    |||||||||||||| |||| |||||||||||||||| |||||  |  || ||||| |||| |||| | ||||||  |||||||| |||||  | ||||||    
T  38589926 atcaaaatagtaaacgacataagatttatgggaccaaattgagccactttatagttagaggaccaaattgaaaa-caaaaataagttaagggaccaaatg 38589828  T
Q  299 atgtattaagcct 311  Q
    |||||||||||||    
T  38589827 atgtattaagcct 38589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 44102202 - 44102150
Alignment:
Q  52 tatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaatta 104  Q
    |||||| ||||||||||| |||||| ||||||||||||| |||||||||||||    
T  44102202 tatgaatatgaagaagtgatggaagaaagaagatgaagaaagggaaaaaatta 44102150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 313
Target Start/End: Original strand, 13367043 - 13367174
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    |||||||||||||| | | |||||||||||| | ||||||||||||||||||| ||| | ||  || ||||| |  | |||| |||||||| | ||||||    
T  13367043 aaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattaaaacactttatagttaagggaccaaagtgaaaaaataaaata 13367142  T
Q  282 aattaagaaatcaaatgatgtattaagcctag 313  Q
    | ||||| |  |  ||||||||||||||||||    
T  13367143 agttaaggatccggatgatgtattaagcctag 13367174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 43275854 - 43275743
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    ||||||| |||| | || |||| ||||||||| | ||||| ||  || ||||| || |||||| | |||||| ||||||||| |||||| | ||||||||    
T  43275854 caaaataataaacggcataagagttatgggactaaattgagacactttatagttagggaaccaaattgaaaacaaaaaataagttaagagaccaaatgat 43275755  T
Q  301 gtattaagccta 312  Q
    ||||||||||||    
T  43275754 gtattaagccta 43275743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 308
Target Start/End: Complemental strand, 117171 - 117045
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    |||||||||||||| | | ||||| | |||| |||||||||||||||||| || ||||| || ||| ||| | || | |||| | ||||||  |||||||    
T  117171 aaaaactaacggagaggaccaaaacaataaacgacagaagatttatgggatcaaattgaaacattttataattaggggaccaaaatgaaaaccaaaaata 117072  T
Q  282 aattaagaaatcaaatgatgtattaag 308  Q
    | |||||  |||||| |||||||||||    
T  117071 agttaagggatcaaacgatgtattaag 117045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 194
Target Start/End: Original strand, 19914793 - 19914911
Alignment:
Q  76 ggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttag 175  Q
    ||||||||||||||| || ||||||||||  || || ||||||| | | || ||||||||| |||||||| |||| |   ||| |||||| |||| ||||    
T  19914793 ggaagaagatgaagaaagagaaaaaattaggtgttggtggttcattgtagtatataatggacctgcaatcaaatggtcacaataatatcaaaaatattag 19914892  T
Q  176 acattaaaaaactaacgga 194  Q
    ||||||| |||| ||||||    
T  19914893 acattaataaacaaacgga 19914911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 312
Target Start/End: Complemental strand, 31624009 - 31623899
Alignment:
Q  202 aaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatg 301  Q
    |||||| |||| |||| |||||||||||||||| ||||| ||  || ||||| || | |||| | ||||||  |||||||| |||||  | |||||||||    
T  31624009 aaaataataaacgacataagatttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatg 31623910  T
Q  302 tattaagccta 312  Q
    |||||||||||    
T  31623909 tattaagccta 31623899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 9853760 - 9853672
Alignment:
Q  114 ggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaa 203  Q
    |||||||||| | ||||||||||| ||||||| || | || |||| |||||| |||  ||||| |||||||||||||||||||| |||||    
T  9853760 ggttcactatag-gtataatggatatgcaatcaaacggttaaaattatatcaaaaaatttagatattaaaaaactaacggaggggatcaa 9853672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 311
Target Start/End: Original strand, 11081085 - 11081154
Alignment:
Q  242 acgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    |||||||||||| |||| |||| | |||||| | ||||||| |||||  |||||||||||||||||||||    
T  11081085 acgtttaatagttagaggaccaaattgaaaacagaaaataagttaagggatcaaatgatgtattaagcct 11081154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 21671217 - 21671262
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagggaaaaaatta 104  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||    
T  21671217 atgaagaagtgatggaagaaagaagatgaagaaagggaaaaaatta 21671262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 31625383 - 31625506
Alignment:
Q  188 taacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaa 287  Q
    |||||||| | | |||||||||||| | || |||||||||||||||| ||||| ||  || ||| | || | |||| | ||||||  |||||||| ||||    
T  31625383 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacactttataattaggggaccaaattgaaaaccaaaaataagttaa 31625482  T
Q  288 gaaatcaaatgatgtattaagccta 312  Q
    |  ||||||||||||||||||||||    
T  31625483 g-gatcaaatgatgtattaagccta 31625506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 38790179 - 38790259
Alignment:
Q  115 gttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    |||||||||| | || |||||||||||||||| ||| || || ||||||||  | | ||||||||||||||| ||||||||    
T  38790179 gttcactattatatacaatggatctgcaatcggatggttgaagtcatatcaacattattagacattaaaaaattaacggag 38790259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 310
Target Start/End: Original strand, 41867949 - 41868037
Alignment:
Q  222 atttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
    ||||||||||||| ||||| ||  || ||||| || | |||| ||||||||  ||||||||||||||  | ||||||||||||||||||    
T  41867949 atttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaactaaaaataaattaagggaccaaatgatgtattaagcc 41868037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 311
Target Start/End: Complemental strand, 24068463 - 24068324
Alignment:
Q  172 ttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaa 271  Q
    |||||||||||||||||||||||| | | |||| ||||||| |   ||||| ||||||||||| ||||| ||  || ||||| || | |||| | |||||    
T  24068463 ttagacattaaaaaactaacggagaggaccaaattagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaatgaaa 24068364  T
Q  272 ataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    |  |||||||| |||||  | ||||  |||||||||||||    
T  24068363 accaaaaataagttaagggaccaaagcatgtattaagcct 24068324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 309
Target Start/End: Original strand, 37276236 - 37276363
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    |||||||||| ||| | | ||| ||| |||| | || |||||||||||||||| ||||| ||  || ||||| |  | | || ||||||||| |||||||    
T  37276236 aaaaactaacagagaggaccaatataataaacggcaaaagatttatgggaccaaattgagacactttatagttaagggatcaaagtgaaaatcaaaaata 37276335  T
Q  282 aattaagaaatcaaatgatgtattaagc 309  Q
    |||||||  | |||||||||||||||||    
T  37276336 aattaagggaccaaatgatgtattaagc 37276363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 37323545 - 37323494
Alignment:
Q  39 ttgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaaga 90  Q
    ||||||||||  |||||||  |||||||||||| ||||||||||||||||||    
T  37323545 ttgatgaatttggtatgaatgtgaagaagtggtagaaggaagaagatgaaga 37323494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 37473696 - 37473730
Alignment:
Q  67 gtggtggaaggaagaagatgaagagagggaaaaaa 101  Q
    |||||||||||||||||||||||| ||||||||||    
T  37473696 gtggtggaaggaagaagatgaagaaagggaaaaaa 37473730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 37473804 - 37473838
Alignment:
Q  67 gtggtggaaggaagaagatgaagagagggaaaaaa 101  Q
    |||||||||||||||||||||||| ||||||||||    
T  37473804 gtggtggaaggaagaagatgaagaaagggaaaaaa 37473838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 42793896 - 42793810
Alignment:
Q  111 gatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggaggg 197  Q
    ||||||||||||||   || ||||||  ||||||| |||| || ||||||||||| || | ||||||||||||||| |||| |||||    
T  42793896 gatggttcactattaattacaatggacatgcaatccaatggttaaaatcatatcaaaagttttagacattaaaaaattaacagaggg 42793810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 2075584 - 2075487
Alignment:
Q  96 aaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacgg 193  Q
    ||||||||||||||||||||| |||||||   || |||| | |||||||| | || || |||||| |||| | || ||| ||||||||||| ||||||    
T  2075584 aaaaaattatatggtgatggtgcactattagatacaatgaacctgcaatcaagtggttaaaatcacatcatacatattatacattaaaaaattaacgg 2075487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 22621084 - 22621136
Alignment:
Q  139 tgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaac 191  Q
    ||||||| ||||||| |||||||||||  ||| ||| ||||||||||||||||    
T  22621084 tgcaatcaaatgattaaaatcatatcaagaattttatacattaaaaaactaac 22621136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 312
Target Start/End: Original strand, 36734571 - 36734667
Alignment:
Q  216 cagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagccta 312  Q
    ||||| ||||||||||||| ||||| ||   | ||||||||   |||| ||||||||| |||||||| |||||  ||| ||||||||| ||||||||    
T  36734571 cagaaaatttatgggaccaaattgagacacattatagtcaggcgaccaaagtgaaaatgaaaaataagttaagggatccaatgatgtaataagccta 36734667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 37324681 - 37324817
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    ||||| |||||||| ||| ||||||||||||||   |||||||| || ||||| ||||| || ||| ||||| || | |||| | | ||||  |||||||    
T  37324681 aaaaattaacggagagaaacaaaatagtaaatggtcgaagatttttgagaccaaattgagacattttatagttaggggaccaaattaaaaaccaaaaata 37324780  T
Q  282 aattaagaaatcaaatgatgtattaagcctagttttt 318  Q
    | |||||  || |||||| ||||||| | ||||||||    
T  37324781 agttaagggattaaatgacgtattaaacatagttttt 37324817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 39516404 - 39516520
Alignment:
Q  96 aaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    |||| |||| ||| ||| |||||||||||   || ||||||  ||||||| |||| || |||||| || | |||  ||||||||||||||||||||||||    
T  39516404 aaaagattagatgctgacggttcactattagatacaatggacatgcaatcaaatggttaaaatcacatgaaaaaatttagacattaaaaaactaacggag 39516503  T
Q  196 ggaatcaaaatagtaaa 212  Q
     | |||| | |||||||    
T  39516504 aggatcacattagtaaa 39516520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 40251305 - 40251353
Alignment:
Q  138 ctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaa 186  Q
    ||||||| ||||| || ||||||||||| |||| |||||||||||||||    
T  40251305 ctgcaattgaatggttgaaatcatatcaaaaatattagacattaaaaaa 40251353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 43 - 311
Target Start/End: Complemental strand, 8642 - 8373
Alignment:
Q  43 tgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaa-ttatatggtgatggttcactattgtgtataatggatctgc 141  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||| ||||| ||| ||||    
T  8642 tgaattttgtatgaatatgaagaagtggtggaaggaataagatgaagagagggaaaaaaattatgtggtgatggttcactattgtatataacggacctgc 8543  T
Q  142 aatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgat 241  Q
    ||||||||| || |||| ||||||||||||||| ||||||||||||||||||||   | | |||||||||||||| |||||||||||||||||  ||||     
T  8542 aatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccgaaatagtaaatgactgaagatttatgggaccaatttgag 8443  T
Q  242 acgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    ||  || ||||| || | | || ||||||||  |||||||| |||||  | ||||||||| |||||||||    
T  8442 acagtttatagttaggggagcaaagtgaaaaccaaaaataagttaagggaccaaatgatggattaagcct 8373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 312
Target Start/End: Original strand, 9471 - 9601
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    ||||||||||||||   | |||||| ||||| | ||||||||||||||||| | ||||| ||  || ||||| || | |||| ||||| || ||||||||    
T  9471 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaata 9570  T
Q  282 aattaagaaatcaaatgatgtattaagccta 312  Q
    | |||||  | ||||||||||||||||||||    
T  9571 agttaagggaccaaatgatgtattaagccta 9601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 39 - 308
Target Start/End: Complemental strand, 22389 - 22125
Alignment:
Q  39 ttgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatc 138  Q
    |||||||||| |||||||| ||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||| | |    
T  22389 ttgatgaattttgtatgaatatgaag---tggtggaaggaagaagatgaagagagggaaaaaattacatggtgatggttcactgttgtatataatgtacc 22293  T
Q  139 tgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacatt 238  Q
    || |||| |||| |  |||||||||||||||||||||||||||||||| ||||||||   | |||||||||||| ||||||||||||||| || || |||    
T  22292 tggaatc-aatggtggaaatcatatcagaaatgttagacattaaaaaattaacggagatgaccaaaatagtaaacgacagaagatttatgtgaacaaatt 22194  T
Q  239 gatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaag 308  Q
    || || ||| ||||| |||| | || ||||||||| ||||||||  ||||  ||||||||||||||||||    
T  22193 gagacattttatagttagag-atcaaagtgaaaatcaaaaataaggtaagggatcaaatgatgtattaag 22125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 2e-50; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 43 - 228
Target Start/End: Complemental strand, 34083320 - 34083136
Alignment:
Q  43 tgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgca 142  Q
    |||||| |||||||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  34083320 tgaattttgtatgaatatgaagaagtggtgtacggaagaagatgaagagagggaaaaaattatgtggtgatggttcactattgtatataatggacctgca 34083221  T
Q  143 atcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatg 228  Q
    |||||||| || |||| ||||||||||||||| ||||| | |||||||| ||  | |||||||||||||| ||| ||| |||||||    
T  34083220 atcgaatggttgaaattatatcagaaatgttacacatt-agaaactaacagaaaggatcaaaatagtaaacgactgaaaatttatg 34083136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 191
Target Start/End: Complemental strand, 18773915 - 18773768
Alignment:
Q  45 aattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagaggg-aaaaaattatatggtgatggttcactattgtgtataatggatctgcaa 143  Q
    |||| |||||||| ||||||||||| |||||||||||||||||||| |||| |||||| |   || || ||||||| | |||| || ||| ||  |||||    
T  18773915 aattttgtatgaatatgaagaagtgatggaaggaagaagatgaagaaagggaaaaaaacttggtgttggtggttcattgttgtatacaatagacatgcaa 18773816  T
Q  144 tcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaac 191  Q
    ||||||| || ||||||||||| |||  | ||||||||||||||||||    
T  18773815 tcgaatggttaaaatcatatcaaaaacatcagacattaaaaaactaac 18773768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 31740142 - 31740323
Alignment:
Q  60 tgaagaagtggtggaaggaagaagatgaagagag-ggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaat 158  Q
    ||||||||||||||||||||||||||||||| ||   |||||||||  || || ||||||| | | || ||||||||| |||||||| |||| |   |||    
T  31740142 tgaagaagtggtggaaggaagaagatgaagaaagaaaaaaaaattaggtgctggtggttcattgtagtatataatggacctgcaatcaaatgctcacaat 31740241  T
Q  159 catatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
     |||  | |||| |||||||||||||||| ||||||  | | |||||| ||||| | || |||||||||||||||| |||||    
T  31740242 aatacaaaaaatattagacattaaaaaacaaacggataggaccaaaatggtaaacggcataagatttatgggaccaaattga 31740323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 320
Target Start/End: Original strand, 22299915 - 22300034
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| | ||||||||||||||||||| ||||| ||  || ||||| || | |||| ||||||||  |||||||| |||||  ||||||  ||    
T  22299915 caaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggatcaaagcat 22300014  T
Q  301 gtattaagcctagtttttat 320  Q
    ||||||| |||  |||||||    
T  22300015 gtattaaaccttttttttat 22300034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 310
Target Start/End: Original strand, 8412308 - 8412437
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaat 280  Q
    |||| |||||||||| | | |||||||||||| | || |||||||||||||||| ||||| ||  || ||||| || | || | | |||||| |||||||    
T  8412308 aaaatactaacggagaggaccaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaat 8412407  T
Q  281 aaattaagaaatcaaatgatgtattaagcc 310  Q
    || |||||  | ||||| ||||||||||||    
T  8412408 aagttaagggaccaaataatgtattaagcc 8412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 321
Target Start/End: Complemental strand, 33807838 - 33807673
Alignment:
Q  156 aatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtca 255  Q
    |||||||| | |||| | ||||||||||||| |||||||| | | |||||  ||||| | ||||| |||||||| | || ||||| ||  || ||||| |    
T  33807838 aatcatatgaaaaatatcagacattaaaaaattaacggagaggaccaaaacggtaaacggcagaaaatttatggcatcaaattgagacactttatagtta 33807739  T
Q  256 gagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcctagtttttatt 321  Q
      | |||| ||||||||  |||||||| |||||  ||||||| |||||||||||||| || |||||    
T  33807738 agggaccaaagtgaaaaccaaaaataagttaagggatcaaataatgtattaagcctatttattatt 33807673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 29675684 - 29675589
Alignment:
Q  98 aaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacgg 193  Q
    |||||||| |||||||||| |||||||   || |||||| |||||||| | || || |||||| |||| | || ||| ||||||||||||||||||    
T  29675684 aaaattatgtggtgatggtgcactattagatacaatggacctgcaatccagtggttaaaatcacatcatacatattatacattaaaaaactaacgg 29675589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 5311383 - 5311273
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| |||| ||||||||| |||||| ||||| ||  || ||||| || | || | | ||||||  |||||||| |||||  | ||||||||    
T  5311383 caaaatagtaaacgacataagatttataggaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaagggaccaaatgat 5311284  T
Q  301 gtattaagcct 311  Q
    |||||||||||    
T  5311283 gtattaagcct 5311273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 311
Target Start/End: Complemental strand, 31738486 - 31738357
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    |||||||||||||| | | |||||| |||||   ||||||| ||||||||||| ||||| ||  || ||||| || | |||| | ||||||  |||||||    
T  31738486 aaaaactaacggagaggaccaaaatggtaaaccgcagaagacttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaata 31738387  T
Q  282 aattaagaaatcaaatgatgtattaagcct 311  Q
    | |||||  | |||| ||||||||||||||    
T  31738386 agttaagggaccaaaggatgtattaagcct 31738357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 2e-50; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 26055158 - 26054962
Alignment:
Q  43 tgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgca 142  Q
    |||||| |||||||| |||| |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||| || |||||    
T  26055158 tgaattttgtatgaatatga-gaaggggtggaaggaagaagatgaagaaagggaaaaaattatgtggtgatggttcactattgtatataatagacctgca 26055060  T
Q  143 atcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    ||| |||| || |||| |||||| |||| || |||||||||||||||||| |||  | |||||||||||| |||||||||||||||| |||| |||||    
T  26055059 atctaatggttgaaattatatcataaatatttgacattaaaaaactaacgaaggagaccaaaatagtaaacgacagaagatttatggaaccaaattga 26054962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 97 - 273
Target Start/End: Complemental strand, 9592446 - 9592270
Alignment:
Q  97 aaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagg 196  Q
    ||||||||| |||||||||||||| ||||| ||| ||| | |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||      
T  9592446 aaaaattatgtggtgatggttcaccattgtatatgatgaacctgcaatcgaatgattgaaatcatatcagaaatgttagacattaaaaaattaacggaaa 9592347  T
Q  197 gaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaat 273  Q
      |||||||||||||| |||| ||||||||||||| || ||||| ||  || ||||| || | |||| |||||||||    
T  9592346 tgatcaaaatagtaaacgacaaaagatttatgggatcaaattgaaacactttatagttaggggaccaaagtgaaaat 9592270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 14071215 - 14071325
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||| ||||| ||||||||| ||||||||||| ||||| ||  || ||||| |||| |||| | ||||||  ||||||||||||||  | ||||||||    
T  14071215 caaaatggtaaacgacagaagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataaattaagggaccaaatgat 14071314  T
Q  301 gtattaagcct 311  Q
    |||||||||||    
T  14071315 gtattaagcct 14071325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 36511297 - 36511382
Alignment:
Q  155 aaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||||||||  ||||| ||| |||||| |||||||||||||   | |||||||||||| ||||||||||||||||||||| |||||    
T  36511297 aaatcatatttgaaatattatacattagaaaactaacggagatgaccaaaatagtaaacgacagaagatttatgggaccaaattga 36511382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 310
Target Start/End: Original strand, 47411440 - 47411569
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaat 280  Q
    |||| |||||||||| |||||||||||||||| | || |||||||||||||||| ||||| ||  || ||||| || |||||| |  |||||   |||||    
T  47411440 aaaatactaacggagagaatcaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagttagggaaccaaatggaaaaccgaaaat 47411539  T
Q  281 aaattaagaaatcaaatgatgtattaagcc 310  Q
    || |||||  | ||||||||||||||||||    
T  47411540 aagttaagggaccaaatgatgtattaagcc 47411569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 14390379 - 14390251
Alignment:
Q  184 aaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaa 283  Q
    |||||||||||| | | |||||| ||||| || ||||||||||||| |||| ||||| || ||| ||||| |||| |||| | ||||| ||||||||||     
T  14390379 aaactaacggagaggaccaaaatggtaaacgaaagaagatttatggaaccaaattgagacattttatagttagaggaccaaaatgaaattaaaaaataag 14390280  T
Q  284 ttaagaaatcaaatgatgtattaagccta 312  Q
    |||||  | ||||  ||||||||||||||    
T  14390279 ttaagggaccaaagcatgtattaagccta 14390251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 319
Target Start/End: Complemental strand, 3978161 - 3978030
Alignment:
Q  188 taacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaa 287  Q
    |||||||| | | |||||||||||| ||||||||| |||||||| || ||||| ||  || ||||| | || |||| | ||||| | |||||||| ||||    
T  3978161 taacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacactttatagttaaaggaccaaaatgaaattcaaaaataagttaa 3978062  T
Q  288 gaaatcaaatgatgtattaagcctagttttta 319  Q
    |  | |||||||||||||||||||| ||||||    
T  3978061 gggaccaaatgatgtattaagcctatttttta 3978030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 240
Target Start/End: Complemental strand, 49140058 - 49139866
Alignment:
Q  52 tatgaacatgaagaagtggtggaaggaagaagatgaag----agagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcga 147  Q
    |||||| |||||||||||||||||||||||||||||||     || | |||||| ||  || ||  ||| |||||||   ||||||||| || ||||| |    
T  49140058 tatgaatatgaagaagtggtggaaggaagaagatgaaggaaaggaagaaaaaaagtaagtgttggcggtacactattaaatataatggaccttcaatcaa 49139959  T
Q  148 atgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||||| |||| ||||   |||| ||| ||||||||||||||||||||   | ||||||||||||   | ||||||||||| ||||| |||||    
T  49139958 atgattgaaataatatataaaatattaaacattaaaaaactaacggagattaccaaaatagtaaactgcggaagatttatgagaccaaattga 49139866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 19466198 - 19466256
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||||||||||||| ||| || ||||||||| ||||||||||||||||||||| |||||    
T  19466198 aaaaactaacggagagaaccacaatagtaaacgacagaagatttatgggaccaaattga 19466256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 25787156 - 25787286
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaat 280  Q
    |||| |||||||||| | | |||||||||||||| || |||||||||| ||||| ||||| ||  || ||||| || | |||| | ||||||  ||||||    
T  25787156 aaaatactaacggagaggaccaaaatagtaaatggcataagatttatgagaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaat 25787255  T
Q  281 aaattaagaaatcaaatgatgtattaagcct 311  Q
    || |||||  | |||||||||||||||||||    
T  25787256 aagttaagggaccaaatgatgtattaagcct 25787286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 310
Target Start/End: Complemental strand, 21277117 - 21276989
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    ||||||||| |||| | |||||||||||||| | ||||||||||||||||||| ||||| |   || ||||| ||  ||||| | ||||||  |||||||    
T  21277117 aaaaactaatggagaggatcaaaatagtaaacggcagaagatttatgggaccaaattgagatactttatagttaggcaaccaaattgaaaaccaaaaata 21277018  T
Q  282 aattaagaaatcaaatgatgtattaagcc 310  Q
    | |||||  | ||||| ||||||||||||    
T  21277017 agttaagggaccaaataatgtattaagcc 21276989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 320
Target Start/End: Complemental strand, 13641361 - 13641242
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| | ||||||||||||||||||| ||||| ||  || ||||| || | |||| ||||||||  |||||||| |||||  ||||||  ||    
T  13641361 caaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggatcaaagcat 13641262  T
Q  301 gtattaagcctagtttttat 320  Q
    ||||||| |||  |||||||    
T  13641261 gtattaaaccttttttttat 13641242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 25786072 - 25785961
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    ||||||| |||| |||| |||||||||||||||| ||||| ||  || ||||| || | |||| | ||||||  |||||||| |||||  | ||||||||    
T  25786072 caaaataataaacgacataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgat 25785973  T
Q  301 gtattaagccta 312  Q
    ||||||||||||    
T  25785972 gtattaagccta 25785961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 36509934 - 36509876
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||||||||||||| ||| |||||||||||| | |||||||||||||| |||| |||||    
T  36509934 aaaaactaacggagagaaccaaaatagtaaacggcagaagatttatggaaccaaattga 36509876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 14171278 - 14171319
Alignment:
Q  199 atcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  14171278 atcaaaatagtaaatgacagatgatttatgggaccaaattga 14171319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 195
Target Start/End: Original strand, 34654247 - 34654346
Alignment:
Q  96 aaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    |||||| ||| || || ||||||| | |||| || |||||| ||||||||||||| || ||||||||| | |||| |||| |||| ||||| ||||||||    
T  34654247 aaaaaactatgtgttgttggttcattgttgtatacaatggacctgcaatcgaatggttgaaatcatattaaaaatattagtcatttaaaaattaacggag 34654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 40533526 - 40533609
Alignment:
Q  114 ggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggaggg 197  Q
    |||||||||||   || ||||||  ||||||| |||| || ||||||||||| || | ||||||||||||||| ||||||||||    
T  40533526 ggttcactattaattacaatggacatgcaatccaatggttaaaatcatatcaaaagttttagacattaaaaaattaacggaggg 40533609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 12667222 - 12667280
Alignment:
Q  139 tgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggaggg 197  Q
    ||||||| ||||||| |||||| |||| |||  || |||||||||||||||||||||||    
T  12667222 tgcaatcaaatgattaaaatcaaatcaaaaaatttcgacattaaaaaactaacggaggg 12667280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 22167902 - 22167844
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||||||||| ||| ||| ||||||| |||| | ||||||||||||||||||| |||||    
T  22167902 aaaaactaacagagagaaccaaaataataaacggcagaagatttatgggaccaaattga 22167844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 26056140 - 26056198
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||| ||||||||| | | |||||||||||| |||| |||||||||||||||| |||||    
T  26056140 aaaatctaacggagaggaccaaaatagtaaacgacaaaagatttatgggaccaaattga 26056198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 195
Target Start/End: Complemental strand, 51217878 - 51217728
Alignment:
Q  50 tgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaa-----ttatatggtgatggttcactattgtgtataatggatctgcaat 144  Q
    |||||||| ||||||||||| | |||| ||||||||||||| | ||||||||     |||  || |||||| ||| | ||||  | ||| ||  ||||||    
T  51217878 tgtatgaatatgaagaagtgatagaagaaagaagatgaagaaatggaaaaaaaaaaattaagtgttgatggctcattgttgtacacaatagacatgcaat 51217779  T
Q  145 cgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    | |||| || |||| |||||| |||| |||| |||||||||||||||||||    
T  51217778 ctaatggttgaaattatatcaaaaatattagtcattaaaaaactaacggag 51217728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 51446749 - 51446854
Alignment:
Q  97 aaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagg 196  Q
    |||||||| ||| ||| ||||||| || | ||||||||||  ||||||| ||   || ||||||||||| |||  ||||| |||||||||||||||||||    
T  51446749 aaaaattagatgctgacggttcacaatag-gtataatggacatgcaatcaaacagttaaaatcatatcaaaaaatttagatattaaaaaactaacggagg 51446847  T
Q  197 gaatcaa 203  Q
    | |||||    
T  51446848 ggatcaa 51446854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 51725590 - 51725548
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagggaaaaaa 101  Q
    |||||||||||||||||||||||||||| ||| || |||||||    
T  51725590 atgaagaagtggtggaaggaagaagatggagaaagagaaaaaa 51725548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 33941484 - 33941431
Alignment:
Q  138 ctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaac 191  Q
    |||||||| || | || ||||||||| | |||||||||||||||||||||||||    
T  33941484 ctgcaatcaaacggttaaaatcatattaaaaatgttagacattaaaaaactaac 33941431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 310
Target Start/End: Original strand, 52439333 - 52439406
Alignment:
Q  237 ttgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
    |||| |||||||||||| |||| |||| | |||||| | ||||||| |||||  | ||||||||||||||||||    
T  52439333 ttgaaacgtttaatagttagaggaccaaattgaaaacagaaaataagttaagggaccaaatgatgtattaagcc 52439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 2971780 - 2971692
Alignment:
Q  224 ttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaa-taaattaagaaatcaaatgatgtattaagcct 311  Q
    ||||||||||| ||||| ||  || ||||| |||| || | ||||||||||||||| ||| ||||| ||  ||||||||||||||||||    
T  2971780 ttatgggaccaaattgagacactttatagttagaggactaaagtgaaaataaaaaaataagttaaggaactaaatgatgtattaagcct 2971692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 13930687 - 13930791
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||| ||||| |||| |||| ||||||||||| ||||| ||  || ||||| |||| |||| | ||||||  |||||||| |||||  | ||||||||    
T  13930687 caaaatggtaaacgacataagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataagttaagggaccaaatgat 13930786  T
Q  301 gtatt 305  Q
    |||||    
T  13930787 gtatt 13930791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 14169723 - 14169671
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagt 253  Q
    |||||||||||| |||| |||||||||||||||| ||||| || ||| |||||    
T  14169723 caaaatagtaaacgacaaaagatttatgggaccaaattgagacattttatagt 14169671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 309
Target Start/End: Complemental strand, 47411088 - 47410980
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| |||| |||||||||| ||||| ||||| ||  || ||||| || | | || | ||||||| |||||||| |||||  | ||||| ||    
T  47411088 caaaatagtaaacgacataagatttatgagaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataatttaagggaccaaattat 47410989  T
Q  301 gtattaagc 309  Q
    |||||||||    
T  47410988 gtattaagc 47410980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 7e-50; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 42 - 311
Target Start/End: Original strand, 44304830 - 44305101
Alignment:
Q  42 atgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagaggga--aaaaattatatggtgatggttcactattgtgtataatggatct 139  Q
    ||||||| |||||||||||||| ||| ||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||| ||||||||| ||    
T  44304830 atgaattttgtatgaacatgaaaaagcggtggaaggaaaaagatgaagagagggagaaaaaattatgtggtgatggttcactattgtatataatggacct 44304929  T
Q  140 gcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattg 239  Q
     |||||||||  || ||||||||||||| |||||| | ||||||||| ||||||||   | ||||||||||||   | |||||||||| |||||| ||||    
T  44304930 acaatcgaattgttgaaatcatatcagagatgttaaaaattaaaaaattaacggagatgaccaaaatagtaaacagcggaagatttataggaccaaattg 44305029  T
Q  240 atacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    | ||  ||  |||| || | |||| | |||||| ||||||||| ||||  ||||||||||| ||||||||||    
T  44305030 agacactttgtagttaggggaccaaattgaaaacaaaaaataagttaatgaatcaaatgatatattaagcct 44305101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 309
Target Start/End: Complemental strand, 27409009 - 27408759
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaat 158  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||  || || |||||||   | ||  ||||| || ||||||||||||| |  |||     
T  27409009 atgaagaagtggtggaaggaagaagataaagaaagggaaaaaattaggtgttggtggttcagggtggtacataatagacctgcaatcgaatggtcgaaaa 27408910  T
Q  159 catatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagag 258  Q
    ||||| | |||| ||||| ||||||||||  ||||| |  | |||||| ||||| |  |||||||||||||||||| ||||| ||  || ||||| |||     
T  27408909 catattaaaaatattagatattaaaaaacacacggacgtgaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttatagttagat 27408810  T
Q  259 aaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagc 309  Q
     |||| | ||||||   ||||||| |||||  | |||||||||||||||||    
T  27408809 gaccaaattgaaaactgaaaataagttaagggaccaaatgatgtattaagc 27408759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 59 - 312
Target Start/End: Complemental strand, 31711338 - 31711085
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaat 158  Q
    ||||| |||| ||||||||||||||||||||   |||||||||||| ||| || ||||| | | | || || ||||||  |||||||||||| || |||     
T  31711338 atgaataagtagtggaaggaagaagatgaagcttgggaaaaaattagatgttggtggttgagtgtggtatacaatggacttgcaatcgaatggttgaaac 31711239  T
Q  159 catatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagag 258  Q
     |||||| ||||  || |||||||||||| ||||||  | |||||||| ||||| |||| |||| ||||| ||||| ||||| ||  || ||||| | ||    
T  31711238 aatatcaaaaatagtaaacattaaaaaacaaacggaaaggatcaaaatggtaaacgacataagacttatgagaccaaattgagacactttatagttaaag 31711139  T
Q  259 aaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagccta 312  Q
     |||| | |||||   |||||||| |||||  | ||||||||||||||||||||    
T  31711138 gaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaagccta 31711085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 63 - 310
Target Start/End: Complemental strand, 52659154 - 52658906
Alignment:
Q  63 agaagtggtggaaggaagaagatgaagagagggaaaaaa-ttatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcat 161  Q
    ||||||||||||| |||||||||||||   ||||||||| ||| ||| || ||||||| | | ||||| |||||| ||||||||||||| || |||  ||    
T  52659154 agaagtggtggaatgaagaagatgaagcttgggaaaaaaattagatgttggtggttcagtgtggtgtacaatggacctgcaatcgaatggttgaaacaat 52659055  T
Q  162 atcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaac 261  Q
    |||| |||| ||  |||||||||||| ||||||    |  ||| | ||||| | |||||||||||| | |||| ||||| || ||| ||||| || | ||    
T  52659054 atcaaaaatatttaacattaaaaaacaaacggaaatgactaaactggtaaacggcagaagatttatagaaccaaattgaaacattttatagttaggggac 52658955  T
Q  262 cagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
    || |||||||||||||||||| |||||  | ||||  ||||||||||||    
T  52658954 caaagtgaaaataaaaaataagttaagggaccaaaacatgtattaagcc 52658906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 312
Target Start/End: Original strand, 33377355 - 33377487
Alignment:
Q  180 taaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaa 279  Q
    ||||| |||||||||| | | |||||||||||| | ||||||||||||||||||| ||||| ||  || ||||| || | |||| | ||||||| |||||    
T  33377355 taaaatactaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaa 33377454  T
Q  280 taaattaagaaatcaaatgatgtattaagccta 312  Q
    ||| |||||  | ||||||||||||||||||||    
T  33377455 taagttaagggaccaaatgatgtattaagccta 33377487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 324
Target Start/End: Complemental strand, 33376342 - 33376199
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaat 280  Q
    |||||| |||||||| | |  ||||||||||| ||||||||||||||||||||| ||||| ||  || ||| | || | || | | ||||||  ||||||    
T  33376342 aaaaaattaacggagaggactaaaatagtaaacgacagaagatttatgggaccaaattgagacactttataattagggcactaaattgaaaaccaaaaat 33376243  T
Q  281 aaattaagaaatcaaatgatgtattaagcctagtttttattata 324  Q
    || |||||| | |||||||||||||||||||| |||||||||||    
T  33376242 aagttaagagaccaaatgatgtattaagcctaatttttattata 33376199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 311
Target Start/End: Complemental strand, 86926 - 86797
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    ||||||||||||||   | ||||| |||||| | ||||| ||||||||||||| ||||| | | || ||||| || |||||| ||||||||  |||||||    
T  86926 aaaaactaacggagaagaccaaaacagtaaacggcagaatatttatgggaccaaattgagatgctttatagttagggaaccaaagtgaaaactaaaaata 86827  T
Q  282 aattaagaaatcaaatgatgtattaagcct 311  Q
    |||||||| |  ||||||||||||||||||    
T  86826 aattaagagactaaatgatgtattaagcct 86797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 131 - 314
Target Start/End: Original strand, 21104252 - 21104435
Alignment:
Q  131 aatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatggg 230  Q
    |||||| ||||||||||||| || |||  |||||| ||||  || |||||||||| | ||||||  | | |||||| ||||| |||||||||  |||| |    
T  21104252 aatggacctgcaatcgaatggttgaaacaatatcaaaaatagtaaacattaaaaagcaaacggaaaggaccaaaatggtaaacgacagaagacatatgag 21104351  T
Q  231 accacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcctagt 314  Q
    |||| ||||| ||  || ||||| || | |||| | |||||| ||||||||| ||||| || |||||||| |||||||||||||    
T  21104352 accaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataatttaaggaaccaaatgatatattaagcctagt 21104435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 35787919 - 35787797
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    |||||||||||||| | | |||||  ||||| ||||||||||||||||||||| ||||| || ||| ||||| |||| |||| ||||||||  |||||||    
T  35787919 aaaaactaacggagaggaccaaaacggtaaacgacagaagatttatgggaccaaattgaaacattttatagttagaggaccaaagtgaaaaccaaaaata 35787820  T
Q  282 aattaagaaatcaaatgatgtat 304  Q
    | ||| || | ||||| ||||||    
T  35787819 agttatgagaccaaataatgtat 35787797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 195
Target Start/End: Original strand, 43895490 - 43895623
Alignment:
Q  62 aagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcat 161  Q
    ||||||||||||||||||||||||| ||| |||| |||||||   || |||||||||| | |||| || ||| |   |||||| ||||| || |||| |     
T  43895490 aagaagtggtggaaggaagaagatggagaaagggtaaaaatttggtgttgatggttcattgttgtatacaatagtcatgcaattgaatggttaaaattac 43895589  T
Q  162 atcagaaatgttagacattaaaaaactaacggag 195  Q
    |||| |||| ||||||||||||||| ||||||||    
T  43895590 atcaaaaatattagacattaaaaaattaacggag 43895623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 311
Target Start/End: Original strand, 46795951 - 46796148
Alignment:
Q  114 ggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaat 213  Q
    |||||||||||   || ||||||  ||||||| |||| || ||||||||||| |||  |||||||||||||||||||||||| | | || |||||||||     
T  46795951 ggttcactattaaatacaatggacatgcaatcaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaacggagaggaccacaatagtaaac 46796050  T
Q  214 gacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    |   ||||| ||||||||||| ||||| ||  || ||||| || | |||| | | ||||  |||||||| |||||  | |||| ||||||||||||||    
T  46796051 ggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaattaaaaccaaaaataagttaagggaccaaacgatgtattaagcct 46796148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 311
Target Start/End: Original strand, 15787469 - 15787624
Alignment:
Q  156 aatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtca 255  Q
    |||||||| | |||| ||||||||||||||| ||| |||| | | |||||| ||||| | || || | ||||||||||| ||||| ||  || ||||| |    
T  15787469 aatcatattaaaaatattagacattaaaaaattaatggagaggaccaaaatggtaaacggcaaaaaagttatgggaccaaattgagacactttatagtta 15787568  T
Q  256 gagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    | | |||| | |||||| ||||||||||||||| ||  ||||||| ||||||||||    
T  15787569 ggggaccaaaatgaaaacaaaaaataaattaaggaaaaaaatgatatattaagcct 15787624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 155 - 253
Target Start/End: Original strand, 34439626 - 34439724
Alignment:
Q  155 aaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagt 253  Q
    |||||||||  ||||| ||| |||||| |||||||||||||   | |||||||||||| | ||||||||||||||||||| ||||| || ||| |||||    
T  34439626 aaatcatatttgaaatattatacattagaaaactaacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgaaacattttatagt 34439724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 223 - 317
Target Start/End: Complemental strand, 37559080 - 37558986
Alignment:
Q  223 tttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcctagtttt 317  Q
    |||||||||||| ||||| || ||| ||||| || | |||| | ||||||  |||||||| ||||| || |||||||||||||||||||||||||    
T  37559080 tttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagttaaggaaccaaatgatgtattaagcctagtttt 37558986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 253
Target Start/End: Complemental strand, 38417748 - 38417605
Alignment:
Q  110 tgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagt 209  Q
    |||||| ||| | |||| || |||||| |||||||| || | || ||||||||| | |||   || ||||||||| |||||||||| | | | |||||||    
T  38417748 tgatgggtcagtgttgtatacaatggacctgcaatcaaacggttgaaatcatattaaaaaatctaaacattaaaatactaacggagaggaccgaaatagt 38417649  T
Q  210 aaatgacagaagatttatgggaccacattgatacgtttaatagt 253  Q
    ||| |||| |||||||||||||||| ||||| ||  ||||||||    
T  38417648 aaacgacataagatttatgggaccaaattgacacacttaatagt 38417605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 34438529 - 34438471
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||||||||| ||| ||| |||||||||||| | ||||||||||||||||||| |||||    
T  34438529 aaaaactaacagagagaaccaaaatagtaaacggcagaagatttatgggaccaaattga 34438471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 311
Target Start/End: Original strand, 10403431 - 10403538
Alignment:
Q  203 aaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgt 302  Q
    ||||| |||| ||| ||||||||||| ||||| ||||||||  || ||||| ||| || || ||||||||  |||||||| |||||| |  |||||||||    
T  10403431 aaataataaacgactgaagatttatgagaccaaattgatacactttatagttaga-aatcaaagtgaaaaccaaaaataagttaagagactaaatgatgt 10403529  T
Q  303 attaagcct 311  Q
    |||||||||    
T  10403530 attaagcct 10403538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 310
Target Start/End: Complemental strand, 38370405 - 38370277
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    ||||||||||||||   | |||||| ||||| ||||||||| ||||| ||||| ||||||||  || || || |||  |||| | ||||||| |||||||    
T  38370405 aaaaactaacggagatgaccaaaatggtaaacgacagaagagttatgagaccaaattgatacactttatcgttagatgaccaaattgaaaatgaaaaata 38370306  T
Q  282 aattaagaaatcaaatgatgtattaagcc 310  Q
    | |||||  | |||| |||||||||||||    
T  38370305 agttaagggaccaaacgatgtattaagcc 38370277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 2292407 - 2292356
Alignment:
Q  50 tgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaa 101  Q
    |||||||| ||||||||||| | |||| ||||||||||||| ||||||||||    
T  2292407 tgtatgaatatgaagaagtgatagaagaaagaagatgaagaaagggaaaaaa 2292356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 41348405 - 41348354
Alignment:
Q  139 tgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaa 190  Q
    ||||||| ||||||| ||||||||||| |||| ||| |||||||||||||||    
T  41348405 tgcaatcaaatgattaaaatcatatcaaaaattttatacattaaaaaactaa 41348354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 308
Target Start/End: Original strand, 55953864 - 55953971
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| | || |||||||| ||||||| ||||| || ||| ||||| |  | |||| | ||||||| |||||||| |||||  ||||||||||    
T  55953864 caaaatagtaaacggcataagatttacgggaccaaattgagacattttatagttatgggaccaaattgaaaatcaaaaataagttaagggatcaaatgat 55953963  T
Q  301 gtattaag 308  Q
     |||||||    
T  55953964 atattaag 55953971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 8363354 - 8363400
Alignment:
Q  157 atcatatcagaaatgttagacattaaaaaactaacggagggaatcaa 203  Q
    ||||||||| |||| ||| |||||||||||||||||||||| |||||    
T  8363354 atcatatcaaaaattttaaacattaaaaaactaacggaggggatcaa 8363400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 26495273 - 26495227
Alignment:
Q  157 atcatatcagaaatgttagacattaaaaaactaacggagggaatcaa 203  Q
    ||||||||| |||| ||| |||||||||||||||||||||| |||||    
T  26495273 atcatatcaaaaattttaaacattaaaaaactaacggaggggatcaa 26495227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 35348964 - 35348908
Alignment:
Q  141 caatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggaggg 197  Q
    ||||| |||| || |||||| |||| |||| |||||||||||||| |||||||||||    
T  35348964 caatcaaatggttaaaatcaaatcaaaaattttagacattaaaaagctaacggaggg 35348908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 311
Target Start/End: Original strand, 37560329 - 37560421
Alignment:
Q  219 aagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    |||||||||||||||| ||||| ||  || ||||| || | |||| | ||||||  |||||||| |||||  | |||||||||||||||||||    
T  37560329 aagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 37560421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 43418199 - 43418143
Alignment:
Q  139 tgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    ||||||| |||| || |||||| |||| |||| ||||||||||||| ||||||||||    
T  43418199 tgcaatcaaatggttgaaatcaaatcaaaaatattagacattaaaatactaacggag 43418143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 52137607 - 52137539
Alignment:
Q  127 gtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    ||||||||||  ||||||| || | || ||||||||||| |||  ||||||||| ||||||||||||||    
T  52137607 gtataatggacatgcaatcaaacggttaaaatcatatcaaaaaatttagacattgaaaaactaacggag 52137539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 56157086 - 56157046
Alignment:
Q  157 atcatatcagaaatgttagacattaaaaaactaacggaggg 197  Q
    ||||||||| |||| ||| ||||||||||||||||||||||    
T  56157086 atcatatcaaaaattttaaacattaaaaaactaacggaggg 56157046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 6e-41; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 6707186 - 6706991
Alignment:
Q  43 tgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgca 142  Q
    |||||| |||||||| |||| |||| ||||||| ||||||||||||||  ||||||||||||| |||||||||||||| ||||| | ||||||| |||||    
T  6707186 tgaattttgtatgaatatga-gaaggggtggaaagaagaagatgaagaaggggaaaaaattatgtggtgatggttcac-attgtatttaatggacctgca 6707089  T
Q  143 atcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    ||| |||| || |||| |||||| |||| || ||||||||||||||||||||||| | |||||||||||| |  ||||||||||||| |||| |||||    
T  6707088 atctaatggttgaaattatatcataaatatttgacattaaaaaactaacggaggggaccaaaatagtaaacggaagaagatttatggaaccaaattga 6706991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 23178688 - 23178816
Alignment:
Q  43 tgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagaggg-aaaaaattatatggtgatggttcactattgtgtataatggatctgc 141  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||| | ||||| ||| ||||    
T  23178688 tgaattttgtatgaatatgaagaagtggtggaaggaataagatgaagagagggaaaaaaattaagtggtgatggttcactattctatataacggacctgc 23178787  T
Q  142 aatcgaatgattcaaatcatatcagaaat 170  Q
    ||||||||| || |||| |||||||||||    
T  23178788 aatcgaatggttgaaattatatcagaaat 23178816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 23589945 - 23590073
Alignment:
Q  43 tgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagaggg-aaaaaattatatggtgatggttcactattgtgtataatggatctgc 141  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||| | ||||| ||| ||||    
T  23589945 tgaattttgtatgaatatgaagaagtggtggaaggaataagatgaagagagggaaaaaaattaagtggtgatggttcactattctatataacggacctgc 23590044  T
Q  142 aatcgaatgattcaaatcatatcagaaat 170  Q
    ||||||||| || |||| |||||||||||    
T  23590045 aatcgaatggttgaaattatatcagaaat 23590073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 240
Target Start/End: Original strand, 40174612 - 40174815
Alignment:
Q  39 ttgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaaga---gagggaaaaaattatatggtgatggttcactattgtgtataatgg 135  Q
    ||||||||||  ||||||| ||||||||||||||||||||| |||||||||    || | ||||||||| ||| ||  ||| |||| ||   ||||||||    
T  40174612 ttgatgaatttggtatgaatatgaagaagtggtggaaggaataagatgaaggaatgaagaaaaaaattagatgttggcggtacactgttaaatataatgg 40174711  T
Q  136 atctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccac 235  Q
    | ||||||||||||| || ||||||||| | |||| ||| ||||||||||||||||||||   | ||||||||||||  ||||||||||||||||||||     
T  40174712 acctgcaatcgaatggttgaaatcatataaaaaatatta-acattaaaaaactaacggagatgaccaaaatagtaaacaacagaagatttatgggaccaa 40174810  T
Q  236 attga 240  Q
    |||||    
T  40174811 attga 40174815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 309
Target Start/End: Original strand, 23178815 - 23179002
Alignment:
Q  122 attgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaag 221  Q
    ||||| ||||| ||||||||||||||||| || |||| ||||||||||||||| ||||||||||||||||||||   | ||||||| |||| ||| ||||    
T  23178815 attgtatataacggatctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaataataaacgactgaag 23178914  T
Q  222 atttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagc 309  Q
    |||||||||||||  || | ||  || ||||| || | |||| ||||||||  |||||||| |||||  | ||||||||| |||||||    
T  23178915 atttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaataagttaagggaccaaatgatggattaagc 23179002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 309
Target Start/End: Original strand, 23590072 - 23590259
Alignment:
Q  122 attgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaag 221  Q
    ||||| ||||| ||||||||||||||||| || |||| ||||||||||||||| ||||||||||||||||||||   | ||||||| |||| ||| ||||    
T  23590072 attgtatataacggatctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaataataaacgactgaag 23590171  T
Q  222 atttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagc 309  Q
    |||||||||||||  || | ||  || ||||| || | |||| ||||||||  |||||||| |||||  | ||||||||| |||||||    
T  23590172 atttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaataagttaagggaccaaatgatggattaagc 23590259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 14716046 - 14716201
Alignment:
Q  42 atgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagaggg--aaaaaattatatggtgatggttcactattgtgtataatggatct 139  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||  |||||||||  || || ||||||| | |||| |||||| ||  |    
T  14716046 atgaattttgtatgaacatgaagaaatggtggaaggaaaaagatgaagaaagggaaaaaaaattaggtgttggtggttcattgttgtatataatagacat 14716145  T
Q  140 gcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    |||||||||||| | |||||| |||| | || ||||| ||||||||||||| ||||    
T  14716146 gcaatcgaatgactgaaatcaaatcaaagatattagatattaaaaaactaatggag 14716201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 319
Target Start/End: Original strand, 10368254 - 10368515
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagg-gaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaa 157  Q
    |||||| ||||||||||||||||||||||||| |||  |||||||||  || || ||||||| | | || |||||||||  |||||||||| | |  |||    
T  10368254 atgaagcagtggtggaaggaagaagatgaagaaaggaaaaaaaattaggtgttggtggttcagtgtggtatataatggacatgcaatcgaacggtcgaaa 10368353  T
Q  158 tcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcaga 257  Q
     ||||||| |||| ||| | |||||||||| ||||||    | ||||||  |||| |  |||| |||||||||| || ||||| ||  || ||||| ||     
T  10368354 acatatcaaaaatattaaatattaaaaaacaaacggacatgaccaaaatgataaacggaagaaaatttatgggatcaaattgagacactttatagttagg 10368453  T
Q  258 gaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcctagttttta 319  Q
    | | || | ||||||| ||||||||||||||  | ||||||||||||||| |||| ||||||    
T  10368454 ggatcaaattgaaaatcaaaaataaattaagggaccaaatgatgtattaaacctatttttta 10368515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 12853987 - 12854090
Alignment:
Q  43 tgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgca 142  Q
    |||||| |||||||| |||| |||| ||||||| |||||||| |||   |||||||||||||| |||||||||||| ||||||| ||||||||| |||||    
T  12853987 tgaattttgtatgaatatga-gaaggggtggaaagaagaagaagaa---agggaaaaaattatgtggtgatggttcgctattgtatataatggacctgca 12854082  T
Q  143 atcgaatg 150  Q
    ||| ||||    
T  12854083 atctaatg 12854090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 1147962 - 1147854
Alignment:
Q  95 gaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacgga 194  Q
    |||||||||| ||| |||||||||||||||   || ||||||  |||||||| ||| || ||||||||||| |||  ||||||||||||||| |||||||    
T  1147962 gaaaaaattagatgatgatggttcactattaactagaatggacatgcaatcggatggttaaaatcatatcaaaaagtttagacattaaaaaaataacgga 1147863  T
Q  195 gggaatcaa 203  Q
    ||| |||||    
T  1147862 ggggatcaa 1147854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 240
Target Start/End: Complemental strand, 12958664 - 12958481
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactat--tgtgtataatggatctgcaatcgaatgattcaa 156  Q
    |||||||||||||||||||||||||| ||||| ||  ||||||||| ||| || ||||| | | |  | | ||||||||| ||||||||||| |||  ||    
T  12958664 atgaagaagtggtggaaggaagaagacgaagaaagaaaaaaaattagatgttggtggtttagtgtggtatatataatggacctgcaatcgaacgatcgaa 12958565  T
Q  157 atcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    | ||||| | |||| ||| |||||||||||| ||||||    | ||||||  ||||||  |||| ||||||||||||| |||||    
T  12958564 aacatataaaaaatattaaacattaaaaaacaaacggaaatgaccaaaatgataaatggaagaaaatttatgggaccaaattga 12958481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 310
Target Start/End: Complemental strand, 37868003 - 37867751
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagg-gaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaa 157  Q
    |||||||||||||||||||||||||||||||| |||  |||||||||  || || ||||||| | | || |||||| || || |||||||| | |  |||    
T  37868003 atgaagaagtggtggaaggaagaagatgaagaaaggaaaaaaaattaggtgttggtggttcaatgtggtatataatagacctacaatcgaacggtcgaaa 37867904  T
Q  158 tcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcaga 257  Q
     ||||||| |||| ||| |||||||||||| ||| ||    | ||||||  |||| || |||| |||| |||||||| ||||| ||  || ||||| ||     
T  37867903 acatatcaaaaatattaaacattaaaaaacaaacagacatgaccaaaatgataaacgaaagaaaatttgtgggaccaaattgagacactttatagttagg 37867804  T
Q  258 gaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
    | | || | ||||||  |||||||| |||||  | ||||||||||||||||||    
T  37867803 ggatcaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaagcc 37867751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 253
Target Start/End: Original strand, 3533547 - 3533690
Alignment:
Q  110 tgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagt 209  Q
    |||||| ||| | |||| || ||||||||||||||| || | || ||||||||||| |||  ||| ||||||||| |||||||||    ||| |||||||    
T  3533547 tgatgggtcagtgttgtatacaatggatctgcaatcaaacggttgaaatcatatcaaaaaacttaaacattaaaatactaacggaaatgatcgaaatagt 3533646  T
Q  210 aaatgacagaagatttatgggaccacattgatacgtttaatagt 253  Q
    ||| |||| |||||||||| ||||| ||||| ||  ||||||||    
T  3533647 aaacgacaaaagatttatgagaccaaattgacacacttaatagt 3533690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 4513623 - 4513786
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaat 158  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||  || || ||| ||| | ||||  | ||| ||  ||||||| |||| || ||||    
T  4513623 atgaagaagtgatgggaggaagaagatgaagaaagggaaaaaattaggtgttggtggctcattgttgtacacaatagacatgcaatcaaatggttgaaat 4513722  T
Q  159 catatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaaga 222  Q
     |||||| |||| |||   | |||||||||||||||| ||||||||| ||  || |||||||||    
T  4513723 tatatcaaaaatattatttaataaaaaactaacggagagaatcaaaagaggtaacgacagaaga 4513786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 4829569 - 4829458
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| |||| |||||||||| || || ||||| || ||| ||||| |  | || | ||||||||  |||||||| ||||| |||||||||||    
T  4829569 caaaatagtaaacgacataagatttatgagatcaaattgagacattttatagttaagggactaaagtgaaaacgaaaaataagttaaggaatcaaatgat 4829470  T
Q  301 gtattaagccta 312  Q
    ||||||||||||    
T  4829469 gtattaagccta 4829458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 195
Target Start/End: Original strand, 4830582 - 4830681
Alignment:
Q  96 aaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    |||||||||  || || ||||||| | |||| || |||||| || |||||||||| || ||||||||||| |||| ||||||||| ||||||||||||||    
T  4830582 aaaaaattaggtgttgttggttcaatgttgtatacaatggacctacaatcgaatggttgaaatcatatcaaaaatattagacattcaaaaactaacggag 4830681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 240
Target Start/End: Complemental strand, 11386870 - 11386689
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaat 158  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||   | || || |||| | | || ||||||||| |||||||| ||||||   |||    
T  11386870 atgaagaagtggtggaaggaagaagacgaagaaagagaaaaaattaggcgttggtgattcattgtagtatataatggacctgcaatcaaatgatcacaat 11386771  T
Q  159 catatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
     |||| | |||| ||| |||||||||||| ||| ||   || |||||| ||||| |  ||||| ||||||||| || |||||    
T  11386770 aatattaaaaatattaaacattaaaaaacaaacagataaaaccaaaatggtaaacggtagaaggtttatgggatcaaattga 11386689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 310
Target Start/End: Complemental strand, 23177797 - 23177668
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtca-gagaaccagagtgaaaataaaaaat 280  Q
    |||||||||||||| | | |||||| ||||| | ||||||||||||||||||| ||||| ||  || ||||| | | | |||| | ||||||  ||||||    
T  23177797 aaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaat 23177698  T
Q  281 aaattaagaaatcaaatgatgtattaagcc 310  Q
    ||||||||  | ||||||||||||||||||    
T  23177697 aaattaagggaccaaatgatgtattaagcc 23177668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 310
Target Start/End: Complemental strand, 23589054 - 23588925
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtca-gagaaccagagtgaaaataaaaaat 280  Q
    |||||||||||||| | | |||||| ||||| | ||||||||||||||||||| ||||| ||  || ||||| | | | |||| | ||||||  ||||||    
T  23589054 aaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaat 23588955  T
Q  281 aaattaagaaatcaaatgatgtattaagcc 310  Q
    ||||||||  | ||||||||||||||||||    
T  23588954 aaattaagggaccaaatgatgtattaagcc 23588925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 4920037 - 4919932
Alignment:
Q  97 aaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagg 196  Q
    |||||||| ||| |||||||||||||| | ||||||||||  ||||||| || | || ||||||||||| |||  |||||  |||||||||||| |||||    
T  4920037 aaaaattagatgctgatggttcactatag-gtataatggacatgcaatcaaacggttaaaatcatatcaaaaaatttagatgttaaaaaactaatggagg 4919939  T
Q  197 gaatcaa 203  Q
    | |||||    
T  4919938 ggatcaa 4919932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 312
Target Start/End: Complemental strand, 42027282 - 42027186
Alignment:
Q  216 cagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagccta 312  Q
    ||||| ||||||||||||| ||||| || |||  |||| |||| |||| | ||||||| |||||||| |||||  | |||| |||||||||||||||    
T  42027282 cagaaaatttatgggaccaaattgagacattttgtagttagaggaccaaaatgaaaatcaaaaataagttaagggaccaaacgatgtattaagccta 42027186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 14509332 - 14509281
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggacc 233  Q
    ||||| |||||||| | | |||||||||||| ||||||||||||||||||||    
T  14509332 aaaaattaacggagaggaccaaaatagtaaacgacagaagatttatgggacc 14509281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 322
Target Start/End: Complemental strand, 12364219 - 12364173
Alignment:
Q  276 aaaataaattaagaaatcaaatgatgtattaagcctagtttttatta 322  Q
    ||||||||||||| ||||||| |||||||||| |||| |||||||||    
T  12364219 aaaataaattaaggaatcaaacgatgtattaaacctattttttatta 12364173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 42596750 - 42596673
Alignment:
Q  115 gttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacg 192  Q
    |||||||||| | || |||||||||||||||| ||| || || | ||||||  | | |||||||||||||||||||||    
T  42596750 gttcactattatatacaatggatctgcaatcggatggttgaagttatatcaacattattagacattaaaaaactaacg 42596673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 2717699 - 2717775
Alignment:
Q  110 tgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaa 186  Q
    ||||||||||| |||   |||||||||  ||||||| |||| || |||||| ||||||||| ||| |||||||||||    
T  2717699 tgatggttcaccatttgatataatggacgtgcaatcaaatggttaaaatcagatcagaaatattaaacattaaaaaa 2717775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 21012047 - 21012131
Alignment:
Q  156 aatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||||||| | |||| ||| ||||| ||||||||||||||   | |||||||||||| ||| ||||||||  ||||||| |||||    
T  21012047 aatcatattaaaaatattatacattcaaaaactaacggagatgaccaaaatagtaaacgacggaagatttgagggaccaaattga 21012131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 37038266 - 37038317
Alignment:
Q  255 agagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaa 307  Q
    |||| |||| |||||||| || |||||||||||| ||||||||||||||||||    
T  37038266 agaggaccaaagtgaaaa-aataaataaattaaggaatcaaatgatgtattaa 37038317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 128 - 308
Target Start/End: Complemental strand, 1273266 - 1273086
Alignment:
Q  128 tataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttat 227  Q
    ||||||||| ||||||||||||| || ||||||||||| |||| ||| |||||||||||||||||||||| | |||||| |||||   ||||||||||||    
T  1273266 tataatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggggaccaaaattgtaaactgcagaagatttat 1273167  T
Q  228 gggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaag 308  Q
    ||||||| ||||| || ||| ||||| | || |||| | ||||||  ||||||||||||||  | ||||||||||||||||    
T  1273166 gggaccaaattgagacattttatagttaaaggaccaaaatgaaaaccaaaaataaattaagggaccaaatgatgtattaag 1273086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 311
Target Start/End: Original strand, 5384193 - 5384468
Alignment:
Q  39 ttgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaaga---gagggaaaaaattatatggtgatggttcactattgtgtataatgg 135  Q
    ||||||||||  || ||||  |||||||||||| ||||||||||||||||||   || | |||||||||  || ||  ||| |||  ||   |||||| |    
T  5384193 ttgatgaatttggtttgaatttgaagaagtggtagaaggaagaagatgaagaaaagaagtaaaaaattagttgttggcggtccacggttaaatataatag 5384292  T
Q  136 atctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccac 235  Q
    |||| |||||||||| || |||| |||||| |||| ||| |||||||||||||||||||| | | |||||||||||| |   |||||||||||||||||     
T  5384293 atctacaatcgaatggttgaaattatatcaaaaatattaaacattaaaaaactaacggagaggaccaaaatagtaaacggacgaagatttatgggaccaa 5384392  T
Q  236 attgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    ||||| ||  || ||||| || | | || | ||||||| |||||||||||||| || |||||||||||||||||||    
T  5384393 attgagacactttatagttaggggatcaaattgaaaatcaaaaataaattaaggaaccaaatgatgtattaagcct 5384468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 53 - 307
Target Start/End: Original strand, 22812249 - 22812505
Alignment:
Q  53 atgaacatgaagaagtggtggaaggaagaagatgaag--agagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatg 150  Q
    ||||| |||||||||||||||||||||||||||||||  |||  ||||||||||  || ||  ||| |||| |    ||||||||| |||||||||||||    
T  22812249 atgaatatgaagaagtggtggaaggaagaagatgaaggaagaaagaaaaaattaggtgttggcggtacactgtaaa-tataatggacctgcaatcgaatg 22812347  T
Q  151 attcaaatcatatcagaaatgttagacatt-aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaa 249  Q
     || ||||||||||| |||| ||| ||||| ||||||||||||||||| | ||||||||||||   |||||||||||||||| || | ||| || ||| |    
T  22812348 gttgaaatcatatcaaaaatattaaacattaaaaaaactaacggaggggaccaaaatagtaaactgcagaagatttatgggatcaaagtgagacatttta 22812447  T
Q  250 tagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaa 307  Q
    |||| |  | || | | |||||||||||||||| |||||  | |||||||||||||||    
T  22812448 tagttaagggactaaaatgaaaataaaaaataagttaagggaccaaatgatgtattaa 22812505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 71 - 227
Target Start/End: Complemental strand, 19524216 - 19524060
Alignment:
Q  71 tggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaat 170  Q
    |||||||||||||||||||| ||||||||||||| ||| || ||||||| | | || || |||||| ||||||||||||| |  |||  |||||| || |    
T  19524216 tggaaggaagaagatgaagaaagggaaaaaattagatgttggtggttcagtgtggtatacaatggacctgcaatcgaatggtcaaaacaatatcaaaatt 19524117  T
Q  171 gttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttat 227  Q
     |||||||||||||||| ||||||    | |||||| ||||| ||||||| ||||||    
T  19524116 attagacattaaaaaacaaacggacatgaccaaaatggtaaacgacagaaaatttat 19524060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 8188108 - 8188206
Alignment:
Q  97 aaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    ||||||||  || ||||||||||| |||   |||||||||  ||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||    
T  8188108 aaaaattaggtgttgatggttcaccattaaatataatggacatgcaatcaaatggttaaaatcatatcagaaattttagacattaaaaaactaacggag 8188206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 42510237 - 42510107
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    |||||||||||||| ||| |||||||||||| | ||||||||||||||||||| ||||| ||  || ||||| |  | |||| | |||||| | ||||||    
T  42510237 aaaaactaacggagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaagggaccaaactgaaaaaataaaata 42510138  T
Q  282 aattaagaaatcaaatgatgtattaagccta 312  Q
    |||||||  ||||   |||||||||||||||    
T  42510137 aattaagggatcaggggatgtattaagccta 42510107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 26404222 - 26404328
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    ||||||||||||||||| ||||||||||||| || ||||| ||  || ||||| | || |||| | | ||||| | ||||||||||||  ||||||||||    
T  26404222 caaaatagtaaatgacataagatttatgggatcaaattgagacactttatagttaaaggaccaaattaaaaatcataaataaattaagggatcaaatgat 26404321  T
Q  301 gtattaa 307  Q
    |||||||    
T  26404322 gtattaa 26404328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 15857475 - 15857528
Alignment:
Q  37 tattgatgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaaga 90  Q
    ||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||    
T  15857475 tattgatgaatttggtatgaatatgaagaagtggtagaaggaagaagatgaaga 15857528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 15857568 - 15857669
Alignment:
Q  139 tgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacatt 238  Q
    |||||| ||||| ||  |||||||||| |||| ||| ||||||||||||||||||||   | |||||| ||||| |||| ||||||||||||| || |||    
T  15857568 tgcaattgaatggttggaatcatatcaaaaatattaaacattaaaaaactaacggagatgaccaaaatggtaaacgacataagatttatgggaacaaatt 15857667  T
Q  239 ga 240  Q
    ||    
T  15857668 ga 15857669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 311
Target Start/End: Original strand, 12935972 - 12936224
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaat 158  Q
    |||||||||||||| ||||||||||||||||   |||||||||||| ||| || |||||||   | || || |||||| | ||||||||||| || |||     
T  12935972 atgaagaagtggtgaaaggaagaagatgaagcttgggaaaaaattagatgttggtggttcagcgtggtatacaatggaccagcaatcgaatggttgaaac 12936071  T
Q  159 catatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagag 258  Q
     |||| | ||||  || |||||||||||| ||||||    | |||||| |||||   || |||| |||| |||||| ||||| ||  || ||||| || |    
T  12936072 aatataaaaaatagtaaacattaaaaaacaaacggaaatgaccaaaatggtaaacagcataagacttattggaccaaattgagacactttatagttaggg 12936171  T
Q  259 aaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
     |||| | ||||||  |||||||| |||||  |  ||||||||||||||||||    
T  12936172 gaccaaaatgaaaaccaaaaataagttaagggactaaatgatgtattaagcct 12936224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 5383065 - 5382930
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    |||||||||||||| | |||||||||||||| |||  |||||||||||||||| ||||| ||  || ||| | ||   |||| |  |||||  |||||||    
T  5383065 aaaaactaacggagaggatcaaaatagtaaacgaccaaagatttatgggaccaaattgagacactttataattaggagaccaaatagaaaaccaaaaata 5382966  T
Q  282 aattaagaaatcaaatgatgtattaagcctagtttt 317  Q
    | |||||  | |||||||||||||||||||| ||||    
T  5382965 agttaagggaccaaatgatgtattaagcctaatttt 5382930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 5975932 - 5975849
Alignment:
Q  129 ataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaa 212  Q
    ||||||||  ||||||| |||| || ||||||||||| |||  |||||||||||||||||||| ||| ||| || |||||||||    
T  5975932 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagtaaa 5975849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 18678073 - 18677971
Alignment:
Q  208 gtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaa 307  Q
    ||||| ||||||||||||||||||||| ||||| ||  || ||||| || | | || ||||||||  |||||||| |||||  | |||||||||||||||    
T  18678073 gtaaacgacagaagatttatgggaccaaattgagacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaa 18677974  T
Q  308 gcc 310  Q
    |||    
T  18677973 gcc 18677971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 10085837 - 10085896
Alignment:
Q  181 aaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattga 240  Q
    |||| |||||||||| | | |||||||||||||  ||||||||||||||||||| |||||    
T  10085837 aaaatactaacggagaggaccaaaatagtaaatagcagaagatttatgggaccaaattga 10085896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 10978226 - 10978289
Alignment:
Q  139 tgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatca 202  Q
    |||||||||||| || |||| |||||| |||| ||| |||||||||| ||||||||||| ||||    
T  10978226 tgcaatcgaatggttaaaattatatcaaaaatattaaacattaaaaatctaacggaggggatca 10978289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 308
Target Start/End: Original strand, 27894035 - 27894142
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| ||| ||| ||||||| ||||| ||||| ||  || ||||| || | |||| |||||||| ||||||||| |||||  | |||| |||    
T  27894035 caaaatagtaaacgacggaaaatttatgagaccaaattgaaacactttatagttaggggaccaaagtgaaaacaaaaaataagttaagcgaccaaacgat 27894134  T
Q  301 gtattaag 308  Q
    ||||||||    
T  27894135 gtattaag 27894142  T

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Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 33431936 - 33431881
Alignment:
Q  121 tattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttaga 176  Q
    |||||| ||||||||| |||||||||||||||| ||||||||| | |||| |||||    
T  33431936 tattgtatataatggacctgcaatcgaatgattgaaatcatataaaaaatattaga 33431881  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 310
Target Start/End: Original strand, 19827123 - 19827261
Alignment:
Q  172 ttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaa 271  Q
    |||||||||||||||| |||||| |  | |||||| ||||| |  |||||||||||||||||| ||||| ||  || ||| | |  | |||| | |||||    
T  19827123 ttagacattaaaaaacaaacggatgtgaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttataattatgggaccaaattgaaa 19827222  T
Q  272 ataaaaaataaattaagaaatcaaatgatgtattaagcc 310  Q
    |  |||||||| |||||| |  |||||||||||||||||    
T  19827223 accaaaaataagttaagagactaaatgatgtattaagcc 19827261  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 30912377 - 30912299
Alignment:
Q  242 acgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcctagtttttat 320  Q
    |||||||||||| |||| || | | |||||| | ||||||| ||||| || |||||||||||||||||||  |||||||    
T  30912377 acgtttaatagttagaggactaaattgaaaacagaaaataagttaaggaaccaaatgatgtattaagccttctttttat 30912299  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 38473542 - 38473600
Alignment:
Q  176 acattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggacca 234  Q
    ||||||||||| |||||||    | |||||||||||| |||||||||||||||||||||    
T  38473542 acattaaaaaattaacggaaatgaccaaaatagtaaacgacagaagatttatgggacca 38473600  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 42979552 - 42979442
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| | ||||||| |||| |||||| ||||| ||  || ||||| |||| |||| | |||||   ||||||||| ||||  ||||||| ||    
T  42979552 caaaatagtaaacggcagaagaattattggaccaaattgaaacactttatagttagaggaccaaaatgaaatccaaaaataaactaagggatcaaattat 42979453  T
Q  301 gtattaagcct 311  Q
    |||||||||||    
T  42979452 gtattaagcct 42979442  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 1273342 - 1273305
Alignment:
Q  53 atgaacatgaagaagtggtggaaggaagaagatgaaga 90  Q
    ||||| || |||||||||||||||||||||||||||||    
T  1273342 atgaatataaagaagtggtggaaggaagaagatgaaga 1273305  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 9219317 - 9219280
Alignment:
Q  167 aaatgttagacattaaaaaactaacggagggaatcaaa 204  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  9219317 aaattttagacattaaaaaactaacggaggggatcaaa 9219280  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 14212117 - 14212194
Alignment:
Q  115 gttcactattgtgtataatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacg 192  Q
    ||||||| |||||||||||||| ||||||||||||| || |||| | || | |||| |||| |||||| ||| |||||    
T  14212117 gttcactgttgtgtataatggacctgcaatcgaatggttgaaattacataaaaaatattagccattaagaaattaacg 14212194  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 18695596 - 18695653
Alignment:
Q  138 ctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    |||||||| || | || ||| ||||||| |||| ||||||||||||||||||||||||    
T  18695596 ctgcaatcaaacggttgaaaacatatcaaaaattttagacattaaaaaactaacggag 18695653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 328232 - 328276
Alignment:
Q  267 tgaaaataaaaaataaattaagaaatcaaatgatgtattaagcct 311  Q
    |||||| ||||||||| |||||  |||||||||||||||||||||    
T  328232 tgaaaacaaaaaataagttaagtgatcaaatgatgtattaagcct 328276  T

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Target: scaffold0084 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 208
Target Start/End: Complemental strand, 11969 - 11803
Alignment:
Q  42 atgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgc 141  Q
    ||||||| ||||  || |||||||||||||||||||||||||||| ||| ||||||||| ||   || || ||||||| | |||| || |||  |  |||    
T  11969 atgaattttgtacaaatatgaagaagtggtggaaggaagaagatggagaaagggaaaaattttggtgttggtggttcattgttgtatacaataaacatgc 11870  T
Q  142 aatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatag 208  Q
    ||||||||| || |||||| |||| |||| |||||||||||||||||||||||| | | ||||||||    
T  11869 aatcgaatggttaaaatcacatcaaaaatattagacattaaaaaactaacggagaggaccaaaatag 11803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 24668 - 24821
Alignment:
Q  42 atgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgc 141  Q
    ||||||| ||||  || |||||||||||||||||||||||||||| ||| ||||||||||||   || || ||||||| | |||| || ||| ||  |||    
T  24668 atgaattttgtaccaatatgaagaagtggtggaaggaagaagatggagaaagggaaaaaatttggtgttggtggttcattgttgtatacaatagacatgc 24767  T
Q  142 aatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggag 195  Q
    ||| ||||| || |||||| || | |||| ||||||||||||||||||||||||    
T  24768 aattgaatggttaaaatcacataaaaaatattagacattaaaaaactaacggag 24821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 313
Target Start/End: Complemental strand, 96406 - 96152
Alignment:
Q  59 atgaagaagtggtggaaggaagaagatgaagagagggaaaaaattatatggtgatggttcactattgtgtataatggatctgcaatcgaatgattcaaat 158  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||  || || ||||||| | | ||  ||||| || ||||||||||||| |  |||     
T  96406 atgaagaaggggtggaaggaagaagataaagaaagggaaaaaattaggtgttggtggttcagtgtggtacataatagacctgcaatcgaatggtcgaaaa 96307  T
Q  159 catatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagag 258  Q
    ||||||| |||| ||||| ||||||||||  |||||    | |||||| ||||| |  ||||||||||| ||| || ||||| ||  || ||||| || |    
T  96306 catatcaaaaatattagatattaaaaaacacacggacatgaccaaaatggtaaacggaagaagatttatcggatcaaattgagacactttatagttaggg 96207  T
Q  259 aaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtattaagcctag 313  Q
     |||| | |||||||  ||||||| ||||   | |||||||||||||||||||||    
T  96206 gaccaaattgaaaatcgaaaataagttaatggaccaaatgatgtattaagcctag 96152  T

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Target: scaffold0098 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 42288 - 42400
Alignment:
Q  131 aatggatctgcaatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacggagggaatcaaaatagtaaatgacagaagatttatggg 230  Q
    |||||| |||||||| || | || ||||||||||| |||   || ||||||||| |||||| ||| | | |||||||||||| |||||||||||||||||    
T  42288 aatggacctgcaatcaaacggttgaaatcatatcaaaaaatataaacattaaaatactaacagagaggaccaaaatagtaaacgacagaagatttatggg 42387  T
Q  231 accacattgatac 243  Q
    | || ||||||||    
T  42388 atcaaattgatac 42400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 312
Target Start/End: Original strand, 621 - 751
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    ||||||||||||||   | |||||| ||||| | ||||||||||||||||| | ||||| ||  || ||||| || | |||| ||||| || ||||||||    
T  621 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaata 720  T
Q  282 aattaagaaatcaaatgatgtattaagccta 312  Q
    | |||||  | ||||||||||||||||||||    
T  721 agttaagggaccaaatgatgtattaagccta 751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 653 - 523
Alignment:
Q  182 aaaaactaacggagggaatcaaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaata 281  Q
    ||||||||||||||   | |||||| ||||| | ||||||||||||||||| | ||||| ||  || ||||| || | |||| ||||| || ||||||||    
T  653 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaata 554  T
Q  282 aattaagaaatcaaatgatgtattaagccta 312  Q
    | |||||  | ||||||||||||||||||||    
T  553 agttaagggaccaaatgatgtattaagccta 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 308
Target Start/End: Original strand, 145881 - 145988
Alignment:
Q  201 caaaatagtaaatgacagaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgat 300  Q
    |||||||||||| | || ||||||||| |||||| ||| | || ||| ||||| || | |  | | ||||||  ||||||||||||||||| ||||||||    
T  145881 caaaatagtaaacggcataagatttattggaccaaattaagacattttatagttaggggattaaattgaaaaccaaaaataaattaagaaaccaaatgat 145980  T
Q  301 gtattaag 308  Q
    ||||||||    
T  145981 gtattaag 145988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 15802 - 15854
Alignment:
Q  142 aatcgaatgattcaaatcatatcagaaatgttagacattaaaaaactaacgga 194  Q
    |||| ||||| | |||||||||| ||||| |||| ||||||||||||||||||    
T  15802 aatctaatgactgaaatcatatctgaaatattaggcattaaaaaactaacgga 15854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 77209 - 77297
Alignment:
Q  217 agaagatttatgggaccacattgatacgtttaatagtcagagaaccagagtgaaaataaaaaataaattaagaaatcaaatgatgtatt 305  Q
    |||| ||||||||||||| ||||| ||| || ||||| ||   |||| |||||||| ||||||||| |||||| |  ||||||||||||    
T  77209 agaatatttatgggaccaaattgaaacgctttatagttaggagaccaaagtgaaaacaaaaaataagttaagagactaaatgatgtatt 77297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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