View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11010_high_7 (Length: 384)
Name: NF11010_high_7
Description: NF11010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11010_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 346; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 19 - 376
Target Start/End: Complemental strand, 6019136 - 6018779
Alignment:
| Q |
19 |
ggaagcgcttcaaaaagttctactcgagatcagttagtaatgggaattatgaattatgattccaatgaaaacgtactggggcaaactaattagtttatag |
118 |
Q |
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| T |
6019136 |
ggaagcacttcaaaaagttctactcgagatcagttagtaatgggaattatgaattatgattccaatgaaaacgtactggggcaaactaattagtttatag |
6019037 |
T |
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| Q |
119 |
tcagtttccaaaattgtatgataggcatattcagatattgaatggaattcaaattatctgaagctcattcctgacaggagactaaatatttgtattttca |
218 |
Q |
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| T |
6019036 |
tcagtttccaaaattgtatgataggcatattcagatattgaatggaattcaaattatctgaagctcattcctgacaggagactaaatatttgtattttca |
6018937 |
T |
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| Q |
219 |
ggcttgttttatgaagaaaattttagtcatttcgatcagtttttgttgttgctctgagaaaatgctttgaccatttctgatttgttaaagatgcgactga |
318 |
Q |
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| T |
6018936 |
ggcttgttttatgaagaaaattttagtcatttcgatcagtttttgttgttgctctgagaaaatgttttgaccatttctgatttgttaaagatgcgactga |
6018837 |
T |
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| Q |
319 |
accagctgctacgtcatctatctgattgtttccatgggattgtataacactctctgct |
376 |
Q |
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| T |
6018836 |
accagctgctacgtcgtctatctgattgtttccatgggattgtataacactctctgct |
6018779 |
T |
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