View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11010_low_4 (Length: 408)

Name: NF11010_low_4
Description: NF11010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11010_low_4
NF11010_low_4
[»] chr3 (50 HSPs)
chr3 (145-384)||(6236702-6236941)
chr3 (174-370)||(19567029-19567226)
chr3 (174-381)||(2721801-2722010)
chr3 (229-384)||(34053611-34053767)
chr3 (212-384)||(11398800-11398971)
chr3 (200-370)||(2005837-2006009)
chr3 (181-370)||(17388343-17388533)
chr3 (212-381)||(42244560-42244728)
chr3 (230-384)||(14494825-14494980)
chr3 (283-384)||(14976309-14976410)
chr3 (174-271)||(27880080-27880177)
chr3 (174-370)||(14071748-14071945)
chr3 (230-384)||(14660792-14660948)
chr3 (149-271)||(51034620-51034742)
chr3 (18-82)||(6236575-6236639)
chr3 (212-384)||(13604953-13605117)
chr3 (212-384)||(17041642-17041814)
chr3 (240-370)||(3212466-3212597)
chr3 (314-383)||(8685857-8685926)
chr3 (229-377)||(19656120-19656268)
chr3 (313-383)||(13069780-13069850)
chr3 (214-327)||(36076107-36076219)
chr3 (294-377)||(43842083-43842166)
chr3 (212-329)||(25054946-25055062)
chr3 (281-381)||(11869848-11869948)
chr3 (317-381)||(17023247-17023311)
chr3 (214-384)||(17050654-17050824)
chr3 (209-369)||(10850753-10850914)
chr3 (212-369)||(27407118-27407274)
chr3 (209-370)||(3279730-3279892)
chr3 (212-369)||(7908430-7908586)
chr3 (174-248)||(40846653-40846727)
chr3 (212-370)||(13418294-13418451)
chr3 (212-329)||(11827477-11827593)
chr3 (283-370)||(14348103-14348191)
chr3 (281-376)||(41545770-41545865)
chr3 (218-370)||(17480372-17480526)
chr3 (212-248)||(14659223-14659259)
chr3 (18-69)||(6141136-6141187)
chr3 (335-381)||(8531923-8531969)
chr3 (20-68)||(6898940-6898988)
chr3 (18-66)||(13271684-13271732)
chr3 (221-276)||(37978433-37978489)
chr3 (19-70)||(6244144-6244195)
chr3 (18-69)||(6264535-6264586)
chr3 (229-369)||(14137759-14137901)
chr3 (314-383)||(11577807-11577876)
chr3 (336-383)||(16703825-16703874)
chr3 (174-246)||(3212085-3212157)
chr3 (20-68)||(6723208-6723256)
[»] chr7 (53 HSPs)
chr7 (174-384)||(9004495-9004705)
chr7 (174-384)||(8787290-8787500)
chr7 (174-375)||(8780426-8780627)
chr7 (174-384)||(17946595-17946806)
chr7 (178-327)||(10204556-10204705)
chr7 (156-370)||(4090549-4090764)
chr7 (174-321)||(25181029-25181176)
chr7 (175-329)||(4307732-4307886)
chr7 (149-304)||(1611862-1612017)
chr7 (174-329)||(4313101-4313256)
chr7 (176-370)||(39271026-39271220)
chr7 (174-370)||(3210762-3210959)
chr7 (212-384)||(35964230-35964401)
chr7 (156-347)||(4029888-4030080)
chr7 (213-381)||(33609625-33609792)
chr7 (209-384)||(3376506-3376681)
chr7 (174-368)||(9311391-9311586)
chr7 (174-368)||(9258667-9258862)
chr7 (230-384)||(14941738-14941893)
chr7 (230-384)||(15369331-15369486)
chr7 (230-384)||(33612278-33612433)
chr7 (212-381)||(17206408-17206576)
chr7 (257-377)||(16076844-16076964)
chr7 (230-384)||(648795-648950)
chr7 (230-384)||(15707249-15707404)
chr7 (233-384)||(48340601-48340749)
chr7 (233-384)||(16097424-16097571)
chr7 (283-384)||(48355594-48355695)
chr7 (218-384)||(41722616-41722784)
chr7 (233-377)||(782792-782932)
chr7 (257-377)||(12561890-12562010)
chr7 (233-377)||(12567565-12567705)
chr7 (314-383)||(4460773-4460842)
chr7 (212-329)||(48713387-48713503)
chr7 (314-381)||(4983163-4983230)
chr7 (233-377)||(5840598-5840738)
chr7 (317-384)||(9264392-9264460)
chr7 (212-334)||(13434793-13434914)
chr7 (314-375)||(4465807-4465868)
chr7 (212-329)||(9194052-9194168)
chr7 (335-384)||(13731834-13731883)
chr7 (333-375)||(4541187-4541229)
chr7 (212-329)||(16897329-16897445)
chr7 (316-370)||(38877414-38877468)
chr7 (218-369)||(48801279-48801432)
chr7 (299-370)||(1613964-1614036)
chr7 (212-327)||(5825963-5826077)
chr7 (285-366)||(2325871-2325953)
chr7 (218-370)||(11997370-11997523)
chr7 (218-370)||(12199071-12199225)
chr7 (257-352)||(368056-368152)
chr7 (316-381)||(679512-679577)
chr7 (212-248)||(38877310-38877346)
[»] chr4 (31 HSPs)
chr4 (174-384)||(43701575-43701785)
chr4 (174-370)||(16953934-16954130)
chr4 (156-370)||(39769-39984)
chr4 (170-370)||(9857061-9857262)
chr4 (212-384)||(31593803-31593974)
chr4 (174-369)||(7197080-7197276)
chr4 (229-384)||(20059165-20059320)
chr4 (257-384)||(11902625-11902751)
chr4 (230-384)||(21275158-21275313)
chr4 (230-384)||(24125230-24125385)
chr4 (233-384)||(3355191-3355338)
chr4 (233-384)||(18286926-18287073)
chr4 (229-377)||(6518291-6518440)
chr4 (283-384)||(16951876-16951977)
chr4 (229-377)||(21102247-21102396)
chr4 (229-371)||(11888993-11889136)
chr4 (209-370)||(12808215-12808377)
chr4 (212-329)||(10731063-10731179)
chr4 (212-329)||(10944832-10944948)
chr4 (286-384)||(3772188-3772289)
chr4 (283-376)||(33331016-33331109)
chr4 (313-380)||(38652153-38652220)
chr4 (314-376)||(5675465-5675527)
chr4 (218-370)||(8091933-8092087)
chr4 (321-381)||(11922461-11922521)
chr4 (208-248)||(23793741-23793781)
chr4 (314-370)||(5513663-5513720)
chr4 (316-376)||(23793614-23793673)
chr4 (286-329)||(13622291-13622334)
chr4 (229-370)||(39043523-39043666)
chr4 (212-248)||(13622227-13622263)
[»] chr8 (29 HSPs)
chr8 (174-384)||(26012850-26013060)
chr8 (156-384)||(25396787-25397016)
chr8 (151-370)||(23455417-23455637)
chr8 (174-329)||(1990558-1990713)
chr8 (209-384)||(6279632-6279807)
chr8 (174-370)||(22284834-22285031)
chr8 (174-328)||(24967145-24967299)
chr8 (174-370)||(17126679-17126877)
chr8 (175-370)||(29003491-29003688)
chr8 (183-384)||(14878297-14878501)
chr8 (212-380)||(14162161-14162328)
chr8 (174-305)||(15759462-15759594)
chr8 (175-308)||(22818097-22818230)
chr8 (231-384)||(18161926-18162080)
chr8 (212-373)||(23221527-23221687)
chr8 (203-352)||(42418565-42418710)
chr8 (208-384)||(23503050-23503228)
chr8 (231-384)||(14351645-14351800)
chr8 (243-370)||(6570572-6570701)
chr8 (229-377)||(17515825-17515974)
chr8 (299-384)||(23193965-23194051)
chr8 (212-369)||(21139574-21139730)
chr8 (209-329)||(9317763-9317883)
chr8 (314-381)||(22904607-22904674)
chr8 (314-370)||(24342067-24342123)
chr8 (314-381)||(19792242-19792309)
chr8 (281-329)||(18008119-18008167)
chr8 (284-370)||(24034637-24034724)
chr8 (314-381)||(24221563-24221630)
[»] chr5 (27 HSPs)
chr5 (156-384)||(24165104-24165331)
chr5 (174-384)||(20169468-20169678)
chr5 (156-370)||(20724875-20725089)
chr5 (149-370)||(12322171-12322394)
chr5 (175-329)||(21273508-21273662)
chr5 (174-384)||(17408732-17408943)
chr5 (174-369)||(21389536-21389733)
chr5 (176-370)||(23435183-23435379)
chr5 (176-370)||(23446550-23446746)
chr5 (198-370)||(21382168-21382341)
chr5 (197-366)||(34223150-34223320)
chr5 (230-384)||(20967674-20967829)
chr5 (230-384)||(23343552-23343707)
chr5 (283-381)||(15059354-15059452)
chr5 (300-383)||(22942354-22942437)
chr5 (229-384)||(20915958-20916115)
chr5 (229-377)||(24220290-24220439)
chr5 (284-377)||(24214723-24214816)
chr5 (229-377)||(31057735-31057880)
chr5 (316-380)||(24166270-24166334)
chr5 (281-370)||(22170762-22170851)
chr5 (314-370)||(16677090-16677146)
chr5 (316-381)||(23029591-23029656)
chr5 (214-329)||(31414527-31414641)
chr5 (174-212)||(20738213-20738251)
chr5 (283-370)||(23756722-23756810)
chr5 (283-370)||(23822178-23822266)
[»] chr1 (33 HSPs)
chr1 (173-370)||(19880128-19880326)
chr1 (157-384)||(41802123-41802351)
chr1 (174-384)||(28207762-28207972)
chr1 (174-384)||(17986440-17986651)
chr1 (174-352)||(52755395-52755574)
chr1 (170-370)||(25726812-25727012)
chr1 (170-370)||(25735220-25735420)
chr1 (173-293)||(19875236-19875356)
chr1 (212-384)||(17716661-17716832)
chr1 (174-369)||(19364534-19364730)
chr1 (212-380)||(13799464-13799631)
chr1 (212-384)||(48256221-48256392)
chr1 (233-377)||(2386155-2386295)
chr1 (233-377)||(28206378-28206518)
chr1 (284-377)||(21792365-21792458)
chr1 (174-369)||(28763898-28764094)
chr1 (212-329)||(16431477-16431593)
chr1 (212-384)||(20412167-20412346)
chr1 (289-377)||(21784239-21784327)
chr1 (316-384)||(26134534-26134601)
chr1 (229-384)||(44538166-44538321)
chr1 (216-329)||(52235913-52236026)
chr1 (317-384)||(8648876-8648944)
chr1 (317-384)||(39286628-39286696)
chr1 (314-376)||(16384968-16385030)
chr1 (218-370)||(22411010-22411164)
chr1 (316-381)||(25405094-25405159)
chr1 (323-377)||(30819068-30819122)
chr1 (229-370)||(19788316-19788459)
chr1 (316-362)||(20899426-20899472)
chr1 (218-370)||(49379679-49379833)
chr1 (233-370)||(36850390-36850529)
chr1 (314-383)||(20860757-20860827)
[»] chr6 (54 HSPs)
chr6 (174-329)||(17284117-17284272)
chr6 (229-384)||(18233820-18233976)
chr6 (183-370)||(8603376-8603563)
chr6 (149-370)||(22601376-22601598)
chr6 (174-329)||(6794826-6794981)
chr6 (180-329)||(5949704-5949853)
chr6 (149-380)||(30245075-30245308)
chr6 (156-329)||(29360167-29360340)
chr6 (214-384)||(25949236-25949406)
chr6 (174-370)||(20105660-20105857)
chr6 (212-384)||(25963834-25964006)
chr6 (212-384)||(25968481-25968653)
chr6 (251-384)||(17743462-17743596)
chr6 (233-384)||(18195536-18195683)
chr6 (174-308)||(19615286-19615421)
chr6 (233-377)||(24218650-24218790)
chr6 (257-377)||(18844416-18844536)
chr6 (233-377)||(25402477-25402617)
chr6 (229-377)||(210156-210305)
chr6 (283-384)||(18184400-18184501)
chr6 (233-377)||(18448700-18448845)
chr6 (209-329)||(29093465-29093584)
chr6 (235-377)||(18854556-18854694)
chr6 (212-366)||(4740890-4741045)
chr6 (209-303)||(25786464-25786559)
chr6 (212-370)||(25339269-25339426)
chr6 (316-381)||(20222915-20222980)
chr6 (316-381)||(22116899-22116964)
chr6 (212-329)||(32543169-32543285)
chr6 (218-370)||(25774939-25775093)
chr6 (209-329)||(19570068-19570189)
chr6 (281-369)||(23348176-23348264)
chr6 (314-381)||(12660479-12660546)
chr6 (212-376)||(18993103-18993266)
chr6 (212-370)||(24545634-24545791)
chr6 (212-370)||(25923409-25923566)
chr6 (212-329)||(20218528-20218644)
chr6 (212-329)||(22112553-22112669)
chr6 (332-381)||(12658051-12658100)
chr6 (316-381)||(20221190-20221255)
chr6 (316-381)||(22115174-22115239)
chr6 (314-370)||(3923656-3923712)
chr6 (316-376)||(16207749-16207809)
chr6 (212-327)||(18627336-18627450)
chr6 (316-376)||(20464386-20464446)
chr6 (212-370)||(19993504-19993660)
chr6 (316-367)||(31965575-31965626)
chr6 (218-370)||(30671315-30671468)
chr6 (314-370)||(25031238-25031295)
chr6 (299-370)||(26821858-26821929)
chr6 (174-212)||(12660655-12660693)
chr6 (317-354)||(26017930-26017966)
chr6 (317-354)||(26138684-26138720)
chr6 (317-354)||(26157303-26157339)
[»] chr2 (41 HSPs)
chr2 (156-370)||(24177702-24177916)
chr2 (174-329)||(23704132-23704287)
chr2 (156-369)||(30949290-30949505)
chr2 (174-329)||(23140033-23140188)
chr2 (174-329)||(23551823-23551978)
chr2 (175-329)||(24507195-24507350)
chr2 (212-384)||(20281961-20282133)
chr2 (156-370)||(27744900-27745116)
chr2 (174-369)||(29577375-29577569)
chr2 (157-370)||(20708297-20708512)
chr2 (209-384)||(539098-539277)
chr2 (183-370)||(29563058-29563247)
chr2 (174-323)||(28496780-28496930)
chr2 (208-384)||(23340485-23340662)
chr2 (233-384)||(5499782-5499929)
chr2 (230-384)||(16134200-16134355)
chr2 (233-377)||(42767388-42767528)
chr2 (299-384)||(19929380-19929465)
chr2 (283-377)||(24825000-24825094)
chr2 (230-384)||(25481304-25481463)
chr2 (230-384)||(25488910-25489069)
chr2 (212-330)||(32441406-32441523)
chr2 (209-370)||(36684187-36684349)
chr2 (257-377)||(24820615-24820735)
chr2 (212-329)||(11391033-11391149)
chr2 (212-329)||(11407694-11407810)
chr2 (212-370)||(41653631-41653788)
chr2 (316-384)||(15583821-15583890)
chr2 (315-381)||(20852132-20852199)
chr2 (316-381)||(19124344-19124409)
chr2 (218-370)||(32139871-32140025)
chr2 (285-370)||(23698830-23698915)
chr2 (281-352)||(21454-21525)
chr2 (216-354)||(21344523-21344660)
chr2 (316-366)||(24371466-24371516)
chr2 (174-212)||(25337344-25337382)
chr2 (283-370)||(25370390-25370478)
chr2 (340-381)||(19013044-19013085)
chr2 (314-370)||(24321805-24321862)
chr2 (212-248)||(24371585-24371621)
chr2 (309-341)||(29568639-29568671)
[»] scaffold1092 (1 HSPs)
scaffold1092 (173-370)||(1714-1912)
[»] scaffold0773 (1 HSPs)
scaffold0773 (174-329)||(977-1132)
[»] scaffold0031 (4 HSPs)
scaffold0031 (174-384)||(77709-77920)
scaffold0031 (230-383)||(100295-100449)
scaffold0031 (283-384)||(23244-23346)
scaffold0031 (316-384)||(199-268)
[»] scaffold0014 (1 HSPs)
scaffold0014 (149-369)||(191182-191404)
[»] scaffold0097 (1 HSPs)
scaffold0097 (157-370)||(12371-12586)
[»] scaffold0064 (1 HSPs)
scaffold0064 (230-384)||(48716-48871)
[»] scaffold0447 (2 HSPs)
scaffold0447 (230-384)||(6344-6499)
scaffold0447 (230-384)||(10958-11113)
[»] scaffold0383 (1 HSPs)
scaffold0383 (230-384)||(8953-9108)
[»] scaffold0916 (1 HSPs)
scaffold0916 (212-384)||(3421-3594)
[»] scaffold0371 (1 HSPs)
scaffold0371 (283-384)||(9099-9200)
[»] scaffold0251 (1 HSPs)
scaffold0251 (229-384)||(18953-19109)
[»] scaffold0471 (1 HSPs)
scaffold0471 (230-384)||(9818-9973)
[»] scaffold0197 (1 HSPs)
scaffold0197 (212-383)||(8875-9037)
[»] scaffold0138 (2 HSPs)
scaffold0138 (283-377)||(27349-27443)
scaffold0138 (283-377)||(39345-39439)
[»] scaffold1208 (1 HSPs)
scaffold1208 (233-377)||(1961-2101)
[»] scaffold0001 (3 HSPs)
scaffold0001 (233-377)||(425043-425183)
scaffold0001 (227-370)||(520672-520815)
scaffold0001 (281-370)||(82631-82721)
[»] scaffold0211 (1 HSPs)
scaffold0211 (233-384)||(17654-17801)
[»] scaffold0142 (2 HSPs)
scaffold0142 (284-377)||(21715-21808)
scaffold0142 (284-377)||(26862-26955)
[»] scaffold0037 (1 HSPs)
scaffold0037 (233-377)||(48328-48468)
[»] scaffold1323 (1 HSPs)
scaffold1323 (283-377)||(1922-2016)
[»] scaffold0123 (1 HSPs)
scaffold0123 (283-377)||(2488-2582)
[»] scaffold0011 (2 HSPs)
scaffold0011 (283-384)||(163924-164025)
scaffold0011 (212-370)||(172645-172803)
[»] scaffold0096 (1 HSPs)
scaffold0096 (230-377)||(37967-38115)
[»] scaffold0006 (1 HSPs)
scaffold0006 (321-384)||(33972-34035)
[»] scaffold0018 (1 HSPs)
scaffold0018 (257-377)||(18781-18901)
[»] scaffold0058 (1 HSPs)
scaffold0058 (283-377)||(61824-61918)
[»] scaffold0075 (1 HSPs)
scaffold0075 (284-377)||(19411-19504)
[»] scaffold0026 (1 HSPs)
scaffold0026 (257-377)||(13675-13795)
[»] scaffold0084 (1 HSPs)
scaffold0084 (149-370)||(31496-31718)
[»] scaffold0362 (2 HSPs)
scaffold0362 (321-384)||(9221-9285)
scaffold0362 (212-269)||(9282-9339)
[»] scaffold0168 (1 HSPs)
scaffold0168 (317-384)||(8864-8932)
[»] scaffold1559 (1 HSPs)
scaffold1559 (314-381)||(1411-1478)
[»] scaffold0057 (1 HSPs)
scaffold0057 (214-329)||(21092-21205)
[»] scaffold0231 (1 HSPs)
scaffold0231 (212-370)||(21229-21387)
[»] scaffold0088 (1 HSPs)
scaffold0088 (316-370)||(38505-38559)
[»] scaffold0012 (1 HSPs)
scaffold0012 (317-384)||(49904-49972)
[»] scaffold0855 (2 HSPs)
scaffold0855 (316-383)||(3478-3544)
scaffold0855 (212-248)||(3374-3410)
[»] scaffold0847 (2 HSPs)
scaffold0847 (316-383)||(3643-3709)
scaffold0847 (212-248)||(3539-3575)
[»] scaffold0098 (1 HSPs)
scaffold0098 (216-329)||(44341-44453)
[»] scaffold0049 (1 HSPs)
scaffold0049 (283-370)||(14647-14735)
[»] scaffold0213 (1 HSPs)
scaffold0213 (313-383)||(21657-21728)
[»] scaffold0713 (1 HSPs)
scaffold0713 (317-354)||(6738-6774)
[»] scaffold0059 (1 HSPs)
scaffold0059 (283-370)||(13018-13106)
[»] scaffold0013 (1 HSPs)
scaffold0013 (283-370)||(232292-232380)


Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 145 - 384
Target Start/End: Original strand, 6236702 - 6236941
Alignment:
Q  145 atatacggccatgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacat 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6236702 atatacggccatgccacctcctaggcctacttttgctgcttttgcttcatggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacat 6236801  T
Q  245 tctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6236802 tctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtg 6236901  T
Q  345 acaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  6236902 acaattgtttctttgaataaaagttcacctttattttatg 6236941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 174 - 370
Target Start/End: Complemental strand, 19567226 - 19567029
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||| ||||||||    
T  19567226 cttttgctgcttttgcttcggagacaagctacctattttgacctaaaagcccatggtttcttgtggaacattctagtgaatacttgcttagattttaagt 19567127  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat--aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||||||||||| |||| |||||||||| ||||| ||||||||| |||| ||||||  |||||||||||||||| | ||| |||||||||||    
T  19567126 cgacataagactataaatagagtagctagctatcataacaattcatcttttattct-tgaaattcaataagtgacaattgtctttcttaataaaagttc 19567029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 174 - 381
Target Start/End: Original strand, 2721801 - 2722010
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||| ||| ||  | | |||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2721801 cttttgctgcttttgtttcatgatccaactgcctgttttgatcgaaaagcccgtggtttcttgtggaacattctagtgaatagttgcttaggttttaagt 2721900  T
Q  274 cgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-a 371  Q
    |||| ||||||||||||||| |||| ||||| |||||||  | ||||||||| ||||  ||||||||||||||||||||||||| ||||||||||||| |    
T  2721901 cgacaataagactataaatagagtagctagccatcacaaatattcatcttttattcttggaaataataagtgacaattgtttctttgaataaaagttcaa 2722000  T
Q  372 cctttatttt 381  Q
    ||||||||||    
T  2722001 cctttatttt 2722010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 229 - 384
Target Start/End: Complemental strand, 34053767 - 34053611
Alignment:
Q  229 gtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| |||||    
T  34053767 gtttcttgtggaacattctagtgattagttgcttagattttaagtcgacataagactataaatagagtagctagctatcacaacaattcatcttctgttc 34053668  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    |  ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  34053667 ttggaaataataagtgacaattgtttctttgaatcaaagttcaacctttattttatg 34053611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 11398800 - 11398971
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| |||||||||||||||||||||| | |    ||| |||||||||||||||  ||| |||||||||||||||| |||||||||||||    
T  11398800 tgacctaaaagcccttggtttcttgtggaacattctagtaatgtattgtttaggttttaagtcggtata-gactataaataaagtagctagctatcacaa 11398898  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||| ||||||||||||||  ||||||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  11398899 caattcatcttttgttcttggaaataataagggacaaatgtttctttgaataaaagttcacctttattttatg 11398971  T

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Target: chr3; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 200 - 370
Target Start/End: Original strand, 2005837 - 2006009
Alignment:
Q  200 agctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgaca-taagactataaataaagtat 298  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||     
T  2005837 agctgcctgttttgaccgaaaagcccgtggtttcttgtggaacattctagtgaatagttgcttaggttttaagtcgacagtaagactataaatagagtag 2005936  T
Q  299 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||| |||||||  | ||||||||  ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  2005937 ctagccatcacaaatattcatctttcattcttggaattcaataagtgacaattgtctttcttaataaaagttc 2006009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 181 - 370
Target Start/End: Original strand, 17388343 - 17388533
Alignment:
Q  181 tgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacata 280  Q
    |||||||||||||   ||||||| |||||||||||| |||||   |||||||||||| |||||||||| ||||||||||||||||||||||||||| |||    
T  17388343 tgcttttgcttcggaaacaagctacctattttgaccaaaaagtttgtggtttcttgtagaacattctattgaatagttgcttaggttttaagtcgatata 17388442  T
Q  281 agactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||||| |||| ||||||||||  |  | ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  17388443 agactataaatagagtagctagctatcaataacattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 17388533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 212 - 381
Target Start/End: Complemental strand, 42244728 - 42244560
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| || ||||||| |||||||    ||| |||||||||| |||| |||||   ||||    
T  42244728 tgacctaaaagcccatggtttcttgtggaacattctagtgatatattt-cttaggtcttaagtcattgtaa-actataaatagagtagctagcagccaca 42244631  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||    
T  42244630 acaaatcatcttttgttctctgaaataataagtgacaattgtttatttgaataaaagttcatctttatttt 42244560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 14494980 - 14494825
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  14494980 tttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 14494881  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14494880 tctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 14494825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 14976410 - 14976309
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttta 382  Q
    |||||||||| |||| ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14976410 actataaatatagtagctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttta 14976311  T
Q  383 tg 384  Q
    ||    
T  14976310 tg 14976309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 27880080 - 27880177
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaa 271  Q
    |||||||||||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  27880080 cttttgctgcttttccttcatgtacaggctgcctattttgacctaaaagcccgtggtttcttgtggaacattctattgaatagttgcttatgttttaa 27880177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 370
Target Start/End: Complemental strand, 14071945 - 14071748
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   |||||   ||| |||||||| ||||||  |||||||||||| ||| |||||| ||||||||| ||||||||||||||    
T  14071945 cttttgctgcttttgcttcgaaaacaagtaacctgttttgaccaaaaagcatgtggtttcttgtagaatattctattgaatagtttcttaggttttaagt 14071846  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaa-taataagtgacaattgtttctctgaataaaagttc 370  Q
    ||| ||||||||||||||| ||||  |||||||||  |  | ||||||||| ||||  |||| ||||||||||||||||| | | | |||||||||||    
T  14071845 cgatataagactataaatagagtagttagctatcaataacattcatcttttattcttggaaattaataagtgacaattgtctttattaataaaagttc 14071748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 14660948 - 14660792
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacata-agactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    ||||||||||||||||||| |||  || |||||||| || |||||||  ||  | |||||||||| |||| ||||| |||||||  | ||||||||||||    
T  14660948 tttcttgtggaacattctagtgatgtaattgcttagattctaagtcggaatctaaactataaatagagtagctagccatcacaaagattcatcttttgtt 14660849  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  14660848 ctctgaaataataagtgacaattgtttctttgaataaaattttacctttattttatg 14660792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 271
Target Start/End: Original strand, 51034620 - 51034742
Alignment:
Q  149 acggccatgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    |||||| |||||||||| ||| |  ||||||||||||||||||| ||  | ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  51034620 acggccgtgccacctcccagggcctcttttgctgcttttgcttcatgatctagctgcctattttgatcgaaaagcccgtggtttcttgtggaacattcta 51034719  T
Q  249 ctgaatagttgcttaggttttaa 271  Q
     |||||| ||||||| |||||||    
T  51034720 gtgaataattgcttaagttttaa 51034742  T

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Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 6236575 - 6236639
Alignment:
Q  18 tctatttggtcgaagagcctccaagatcgagacacgtgctttagttactgagtgatgagtaaata 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6236575 tctatttggtcgaagagcctccaagatcgagacacgtgctttagttactgagtgatgagtaaata 6236639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 13604953 - 13605117
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||| | ||||||||||||||||||| || |||    ||||||||||||||||||    ||| ||||||||||||||| ||||||||| |||    
T  13604953 tgacctaaaagctcatggtttcttgtggaacattatagtgatgtattgcttaggttttaagtcattgtaa-actataaataaagtagctagctatcgcaa 13605051  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||| ||||||||||||||  |||       ||||||||||||||| ||||||||| |||||||||||||||||    
T  13605052 caattcatcttttgttcttggaa-------gtgacaattgtttctttgaataaaatttcacctttattttatg 13605117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 17041642 - 17041814
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||||||||||||||||||||||||||||||   ||| || ||||||  |||||||    ||| |||||||||| |||| |||||||||||     
T  17041642 tgacctaaaagcccgtggtttcttgtggaacattctactcttatattt-cttagggcttaagtcattgtaa-actataaatagagtagctagctatcact 17041739  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    |||| ||||||||||||||  |||||||||||||||||||||||   | |||||||| || ||||||||||||||    
T  17041740 acaattcatcttttgttcttcgaaataataagtgacaattgttttctttaataaaagatcaacctttattttatg 17041814  T

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Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 370
Target Start/End: Original strand, 3212466 - 3212597
Alignment:
Q  240 aacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aa 338  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||  |  | ||||||||| ||||  ||| | |     
T  3212466 aacattctattgaatagttgcttaggttttaagtcgatataagactataaatagagtagctagctatcaataacattcatcttttattcttggaattcac 3212565  T
Q  339 taagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||||||| | |||||||||||||||    
T  3212566 taagtgacaattgtctttctgaataaaagttc 3212597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 314 - 383
Target Start/End: Complemental strand, 8685926 - 8685857
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 383  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8685926 aatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcacctttattttat 8685857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 377
Target Start/End: Complemental strand, 19656268 - 19656120
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||||||||||||||||||| | |  || |||||||| |||||||||||    |  ||||||||| |||| ||||| |||||||  | ||||||||||||    
T  19656268 gtttcttgtggaacattctagtaatgtaattgcttagattttaagtcgaatgtatgctataaatagagtagctagccatcacaaatattcatcttttgtt 19656169  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    ||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  19656168 ctcggaaataataagtgacaattg-ttctttgaataaaagttcaccttta 19656120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 13069780 - 13069850
Alignment:
Q  313 aaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 383  Q
    |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  13069780 aaatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttattttat 13069850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 214 - 327
Target Start/End: Original strand, 36076107 - 36076219
Alignment:
Q  214 acctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaaca 313  Q
    |||||||||||| |||||||||||||||||||||| |||    |||||||||||||||||||  || |||||||||||| ||||  ||||||||| ||||    
T  36076107 acctaaaagcccttggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttat-agactataaatagagtagttagctatcataaca 36076205  T
Q  314 aatcatcttttgtt 327  Q
    | ||||||||||||    
T  36076206 attcatcttttgtt 36076219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 43842166 - 43842083
Alignment:
Q  294 agtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||| ||||| |||||||  | |||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  43842166 agtagctagccatcacaaatattcattttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcaccttta 43842083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 329
Target Start/End: Original strand, 25054946 - 25055062
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    ||||||| |||||| |||||||||||||||||||||| |||    ||| |||||||||||||||  || |||||||||||| ||||  ||||||||| ||    
T  25054946 tgacctagaagcccttggtttcttgtggaacattctagtgatgtattgtttaggttttaagtcgttat-agactataaatagagtagttagctatcataa 25055044  T
Q  312 caaatcatcttttgttct 329  Q
    ||| ||||||||||||||    
T  25055045 caattcatcttttgttct 25055062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 281 - 381
Target Start/End: Complemental strand, 11869948 - 11869848
Alignment:
Q  281 agactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattt 380  Q
    |||||||||||| |||| ||||| | || |   ||||||||||||||||  ||||||||||||||||||||||||| | |||||||||||| ||||||||    
T  11869948 agactataaatagagtagctagcaagcatattgaatcatcttttgttcttggaaataataagtgacaattgtttcttttaataaaagttcatctttattt 11869849  T
Q  381 t 381  Q
    |    
T  11869848 t 11869848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 317 - 381
Target Start/End: Original strand, 17023247 - 17023311
Alignment:
Q  317 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  17023247 catcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 17023311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 214 - 384
Target Start/End: Original strand, 17050654 - 17050824
Alignment:
Q  214 acctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaac 312  Q
    ||||||||||||||||||||||||||||||||||| |   ||| || |||| |  |||||||    ||| |||||||||| ||||  |||||||||||||    
T  17050654 acctaaaagcccgtggtttcttgtggaacattctagtcttatattt-cttaaggcttaagtcattgtaa-actataaatagagtagttagctatcacaac 17050751  T
Q  313 aaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    || ||||||||||||||  ||||||||||||| |||||||||   | |||||||| || ||||||||||||||    
T  17050752 aattcatcttttgttcttggaaataataagtggcaattgttttctttaataaaagatcaacctttattttatg 17050824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 10850914 - 10850753
Alignment:
Q  209 ttttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatca 308  Q
    |||||||| ||| |||||  ||||||||||||||||| || |||    ||||||||||||||||||||    | ||||||||||  ||| ||||| ||||    
T  10850914 ttttgaccgaaatgcccgcagtttcttgtggaacattatagtgatgtattgcttaggttttaagtcgaatgtaaactataaatagcgtagctagccatca 10850815  T
Q  309 caacaaatcatcttttgttctctgaaat--aataagtgacaattgtttctctgaataaaagtt 369  Q
    ||||||||||||||||||||| ||||||  |||||| || |||||| | ||| ||||||||||    
T  10850814 caacaaatcatcttttgttct-tgaaattcaataagagaaaattgtctttcttaataaaagtt 10850753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 212 - 369
Target Start/End: Original strand, 27407118 - 27407274
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||| || ||||||  |||| ||    ||| |||||||||| |||| ||||||||||||    
T  27407118 tgacctaaaagcccgtggtttcttgtggaacattctagtgttatattt-cttagggcttaaatcattgtaa-actataaatagagtagctagctatcaca 27407215  T
Q  311 acaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagtt 369  Q
    |||| |||||||||||||   ||||| |||||||||||||||| | ||| ||||||||||    
T  27407216 acaattcatcttttgttcctagaaatcaataagtgacaattgtct-tcttaataaaagtt 27407274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 370
Target Start/End: Original strand, 3279730 - 3279892
Alignment:
Q  209 ttttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatca 308  Q
    |||||||| |||||||||  |||||||||||||||||||| |||    ||||||||||||||||||||    | |||||||||| |||| ||||| ||||    
T  3279730 ttttgaccgaaaagcccgcagtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgattgtaaactataaatagagtagctagccatca 3279829  T
Q  309 caacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||| |||| ||||||| ||||  ||| | |||||||| ||||||| | |||  ||||||||||    
T  3279830 caataaattatcttttattcttggaattcaataagtggcaattgtctttcttcataaaagttc 3279892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 369
Target Start/End: Original strand, 7908430 - 7908586
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    ||||||||||| ||||||||||||||||||||||||| ||  ||| || ||||||  |||||||    ||| |||||||||| |||| |||||||||| |    
T  7908430 tgacctaaaagtccgtggtttcttgtggaacattctagtgttatattt-cttagggcttaagtcattgtaa-actataaatagagtagctagctatcata 7908527  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagtt 369  Q
    |||||||||||||||||||  ||| | |  |||||||||||| | ||| ||||||||||    
T  7908528 acaaatcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagtt 7908586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 40846653 - 40846727
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    |||||||||||||||||||    ||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  40846653 cttttgctgcttttgcttcagaaacaagctacctattttgacctaaaaactcgtggtttcttgtggaacattcta 40846727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 212 - 370
Target Start/End: Original strand, 13418294 - 13418451
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||| || | ||||  |||||||    ||| |||||||||| ||||  |||||||||||    
T  13418294 tgacctaaaagctcgtggtttcttgtggaacattctagtgatatattt-cgtagggcttaagtcattgtaa-actataaatagagtagttagctatcaca 13418391  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    |||| ||||||||||||||  ||| | |  |||||||||||| | ||| |||||||||||    
T  13418392 acaattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttc 13418451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 329
Target Start/End: Complemental strand, 11827593 - 11827477
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    ||||||||||||||||||||| ||||| ||||||||| ||| ||| || |||||| ||||||||    ||| || ||||||| |||| ||||||||||||    
T  11827593 tgacctaaaagcccgtggtttattgtgaaacattctagtgatatattt-cttagggtttaagtcattttaa-acaataaatagagtagctagctatcaca 11827496  T
Q  311 acaaatcatcttttgttct 329  Q
    |||| ||||||||||||||    
T  11827495 acaattcatcttttgttct 11827477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 370
Target Start/End: Complemental strand, 14348191 - 14348103
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat--aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||| |||| ||||| |||||||||||||||||||| |||| ||||||  |||||||||||||||| | ||| |||||||||||    
T  14348191 actataaatagagtagctagccatcacaacaaatcatcttttattct-tgaaattcaataagtgacaattgtctttcttaataaaagttc 14348103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 376
Target Start/End: Complemental strand, 41545865 - 41545770
Alignment:
Q  281 agactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 376  Q
    |||||||||||| |||| ||||| | || |   ||||||||||||||||  ||||| ||||||||||| ||||||| ||||||||||||| |||||    
T  41545865 agactataaatagagtacctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaaatgtttctttgaataaaagttctccttt 41545770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 370
Target Start/End: Original strand, 17480372 - 17480526
Alignment:
Q  218 aaaagcccgtggtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaat 316  Q
    |||| ||||||||| |||||| ||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| ||||||| || |    
T  17480372 aaaatcccgtggttgcttgtgcaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaaaatt 17480471  T
Q  317 catcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  17480472 catcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 17480526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 14659223 - 14659259
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    |||||||||||||||||||||||||||||||||||||    
T  14659223 tgacctaaaagcccgtggtttcttgtggaacattcta 14659259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 6141136 - 6141187
Alignment:
Q  18 tctatttggtcgaagagcctccaagatcgagacacgtgctttagttactgag 69  Q
    |||||||||| ||||||||||||||| ||||||||||||||  |||||||||    
T  6141136 tctatttggttgaagagcctccaagaccgagacacgtgcttctgttactgag 6141187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 381
Target Start/End: Original strand, 8531923 - 8531969
Alignment:
Q  335 ataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||    
T  8531923 ataataagtgacatttgtttctttgaataaaagttcatctttatttt 8531969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 6898940 - 6898988
Alignment:
Q  20 tatttggtcgaagagcctccaagatcgagacacgtgctttagttactga 68  Q
    |||||||| |||||||||| ||||  |||||||||||||||||||||||    
T  6898940 tatttggttgaagagcctctaagacagagacacgtgctttagttactga 6898988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 13271732 - 13271684
Alignment:
Q  18 tctatttggtcgaagagcctccaagatcgagacacgtgctttagttact 66  Q
    |||||||||| ||||||| ||||||| |||||||||||||| |||||||    
T  13271732 tctatttggttgaagagcttccaagaccgagacacgtgcttcagttact 13271684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 37978489 - 37978433
Alignment:
Q  221 agcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcga 276  Q
    ||||||| |||||||||||||||||||| |||  || ||||||||||||||||||||    
T  37978489 agcccgtagtttcttgtggaacattctagtgatgtaattgcttaggttttaagtcga 37978433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 6244144 - 6244195
Alignment:
Q  19 ctatttggtcgaagagcctccaagatcgagacacgtgctttagttactgagt 70  Q
    ||||||||| |||||||||||||||| |||||| |||||| |||| ||||||    
T  6244144 ctatttggttgaagagcctccaagatagagacatgtgcttcagtttctgagt 6244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 6264535 - 6264586
Alignment:
Q  18 tctatttggtcgaagagcctccaagatcgagacacgtgctttagttactgag 69  Q
    |||||||||||| ||||||||||||| ||||| || ||||| ||||||||||    
T  6264535 tctatttggtcgcagagcctccaagaccgagaaacatgcttcagttactgag 6264586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 369
Target Start/End: Complemental strand, 14137901 - 14137759
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||| ||||||||||||||| |||  || |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | ||||||||||||    
T  14137901 gtttgttgtggaacattctagtgatgtaattgcttagattttaagtcgaatgtaaactataaatagagtagctagcaatcacaaatattcatcttttgtt 14137802  T
Q  328 ctctgaaat-aataagtgacaattgtttctctgaataaaagtt 369  Q
    ||  ||| | |||||||| ||||||| | ||| | ||||||||    
T  14137801 cttggaattcaataagtgtcaattgtctttctcattaaaagtt 14137759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 383
Target Start/End: Complemental strand, 11577876 - 11577807
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 383  Q
    ||||||||||||||||  | |||  || ||||||||| ||||  |||||||||| |||||||||||||||    
T  11577876 aatcatcttttgttcttgggaattctaggtgacaattatttcattgaataaaagatcacctttattttat 11577807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 383
Target Start/End: Original strand, 16703825 - 16703874
Alignment:
Q  336 taataagtgacaattgttt-ctctgaataaaagttca-cctttattttat 383  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  16703825 taataagtgacaattgtttcctttgaataaaagttcatcctttattttat 16703874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 3212085 - 3212157
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattc 246  Q
    |||||| || ||||||||||   ||||||| ||| |||||||| |||||  ||||||||||||| ||||||||    
T  3212085 cttttgttgtttttgcttcggaaacaagctacctgttttgaccaaaaagttcgtggtttcttgtagaacattc 3212157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 6723256 - 6723208
Alignment:
Q  20 tatttggtcgaagagcctccaagatcgagacacgtgctttagttactga 68  Q
    |||||||| |||||||||||||||  ||||||  |||||||||||||||    
T  6723256 tatttggttgaagagcctccaagacagagacatctgctttagttactga 6723208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 174 - 384
Target Start/End: Original strand, 9004495 - 9004705
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  9004495 cttttgctgcttttgcttcggagacaagctacctattttgacctaaaagcctatggtttcttgtggaacattctagtgaatagttacttaggttttaagt 9004594  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacc 373  Q
    ||||||||||||||||||| |||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  9004595 cgacataagactataaatagagtagctagctatcataacaattcatcttttgttctctgaaataataagtgacaattggttctttgaataaaagttcacc 9004694  T
Q  374 tttattttatg 384  Q
    |||||||||||    
T  9004695 tttattttatg 9004705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 174 - 384
Target Start/End: Complemental strand, 8787500 - 8787290
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  8787500 cttttgctgcttttgcttcgaaaacaagctacctattttgacctaaaagcccgtggtttcttgtggaacattctagtgaataattgcttaggttttaagt 8787401  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacc 373  Q
    ||||||||||||||||| | |||||||| |||||| ||||| ||||||||||||||   |||||||||||||||||||||||| ||||||||| ||||||    
T  8787400 cgacataagactataaaaagagtatctatctatcaaaacaattcatcttttgttcttgaaaataataagtgacaattgtttctttgaataaaatttcacc 8787301  T
Q  374 tttattttatg 384  Q
    |||||||||||    
T  8787300 tttattttatg 8787290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 174 - 375
Target Start/End: Complemental strand, 8780627 - 8780426
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   ||||||| | | ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  8780627 cttttgctgcttttgcttcggaaacaagctacattttttgacctaaaagcccatggtttcttgtggaacattctagtgaatagttgcttaggttttaagt 8780528  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacc 373  Q
     |||||||||||||||||| |||||||||||||||||| || ||||||||||||||  |||||||||||| | |||||||||| ||||||||||||||||    
T  8780527 tgacataagactataaatagagtatctagctatcacaataattcatcttttgttcttggaaataataagttataattgtttctttgaataaaagttcacc 8780428  T
Q  374 tt 375  Q
    ||    
T  8780427 tt 8780426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 174 - 384
Target Start/End: Original strand, 17946595 - 17946806
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   ||||||| |||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  17946595 cttttgctgcttttgcttcgcaaacaagctacctattttgaccaaaaagctcgtggtttcttgtagaacattctattgaatagttgcttaggttttaagt 17946694  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-ac 372  Q
    ||| || |||||||||||| |||| ||||||||||  |  | ||||||||||||||  ||||||||||||| ||||||||||| ||||||||||||| ||    
T  17946695 cgatattagactataaatagagtagctagctatcaataacattcatcttttgttcttggaaataataagtgtcaattgtttctttgaataaaagttcaac 17946794  T
Q  373 ctttattttatg 384  Q
    ||||||||||||    
T  17946795 ctttattttatg 17946806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 178 - 327
Target Start/End: Original strand, 10204556 - 10204705
Alignment:
Q  178 tgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgac 277  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  10204556 tgctgcttttgcttcatagacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctagtgaatagtttcttaggttttaagtcgac 10204655  T
Q  278 ataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    ||||||||||||||| |||| |||||||| ||||||| ||||||||||||    
T  10204656 ataagactataaatagagtagctagctattacaacaattcatcttttgtt 10204705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 156 - 370
Target Start/End: Original strand, 4090549 - 4090764
Alignment:
Q  156 tgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaata 255  Q
    ||||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  4090549 tgccacctcctagacctacttttgatgtttttgcttcatggacaagctgcctattttgaccgaaaagtccgtggtttcttgtggaacattctagtgaata 4090648  T
Q  256 gttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgttt 354  Q
    |||||||| |||||||||||||||||||||||||||| ||||  |||||||||  |  | |||||| |||||||  ||| | |||||||||||||||| |    
T  4090649 gttgcttatgttttaagtcgacataagactataaatagagtagttagctatcattaacattcatctattgttcttggaattcaataagtgacaattgtct 4090748  T
Q  355 ctctgaataaaagttc 370  Q
     ||| |||||||||||    
T  4090749 ttcttaataaaagttc 4090764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 174 - 321
Target Start/End: Complemental strand, 25181176 - 25181029
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||| |||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25181176 cttttgttgcttttgcttcatagacaagctgcctattttgacctacaagcctgtggtttcttgtggaacattctagtgaatagttgcttaggttttaagt 25181077  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatct 321  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  25181076 cgacataagactataaatagagtagctagctatcacaacaattcatct 25181029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 175 - 329
Target Start/End: Original strand, 4307732 - 4307886
Alignment:
Q  175 ttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtc 274  Q
    ||||||||  |||||||||  |||||||| ||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||    
T  4307732 ttttgctgtgtttgcttcggagacaagctacctattttgacctaaaagcctatggtttcttgtggaacattctagtgaatagttgcttaggttttaagtc 4307831  T
Q  275 gacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    |||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||    
T  4307832 gacataagactataaatagagtagctagctatcataacaattcatcttttgttct 4307886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 149 - 304
Target Start/End: Original strand, 1611862 - 1612017
Alignment:
Q  149 acggccatgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    |||||| |||||||||| || || ||||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  1611862 acggccgtgccacctcccagacccacttttgttgcttttgcttcatggaaaagctacctattttgacctaaaagcccgtggtttcttgtggaacattcca 1611961  T
Q  249 ctgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagct 304  Q
     |||||||||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  1611962 gtgaatagttgcttaagttttaagtcgacataagactataaatagagtagctagct 1612017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 329
Target Start/End: Original strand, 4313101 - 4313256
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||||||||||||||||   |||||||| ||||||||||||||||||||  ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  4313101 cttttgctgcttttgcttcagagacaagctacctattttgacctaaaagcctatggtttcttgtggaacaatctagtgaatagttgcttaggttttaagt 4313200  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    ||||||||||||||||||| |||| | |||||||| ||||| ||||||||||||||    
T  4313201 cgacataagactataaatagagtagccagctatcataacaattcatcttttgttct 4313256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 176 - 370
Target Start/End: Original strand, 39271026 - 39271220
Alignment:
Q  176 tttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcg 275  Q
    ||||||||||||||||||   ||||||| |||||||||||| |||| |||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  39271026 tttgctgcttttgcttcgaaaacaagctacctattttgaccgaaaa-cccgtggtttcttgtggaacattctagtaattagttgcttaggttttaagtcg 39271124  T
Q  276 acataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||||||||| |||| |||||||||| ||||| | ||||||||||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  39271125 acataagactataaatagagtagctagctatcataacaattgatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagttc 39271220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 370
Target Start/End: Complemental strand, 3210959 - 3210762
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   ||||||| ||| |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  3210959 cttttgctgcttttgcttcgaaaacaagctacctgttttgaccaaaaagcccgtggtttcttgtagaacattctattgaatagttgcttaggttttaagt 3210860  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||| ||||||||||||||| |||| ||||||||||  |  | ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  3210859 cgatataagactataaatagagtagctagctatcaataacattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 3210762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 212 - 384
Target Start/End: Complemental strand, 35964401 - 35964230
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| |||||| ||||||||||||||| |||    |||||||||||||||||||| |||  |||||||||| |||| ||||| |||||||    
T  35964401 tgacctaaaagcccttggttttttgtggaacattctagtgatgtattgcttaggttttaagtcgatatat-actataaatagagtagctagccatcacaa 35964303  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
      | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  35964302 atattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcccctttattttatg 35964230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 156 - 347
Target Start/End: Original strand, 4029888 - 4030080
Alignment:
Q  156 tgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaata 255  Q
    |||||||||| ||| |  ||||||||||||||||||| ||  | |||||||| |||||| | |||||  |||||||||||||||||||||||| ||||||    
T  4029888 tgccacctcccagggcctcttttgctgcttttgcttcatgatctagctgcctgttttgatcgaaaagttcgtggtttcttgtggaacattctagtgaata 4029987  T
Q  256 gttgcttaggttttaagtcgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgaca 347  Q
    |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||  |  | ||||||||||||||  ||||||||||||||||    
T  4029988 gttgcttaggttttaagtcgacaataagactataaatagagtagctagctatcattaacattcatcttttgttcttggaaataataagtgaca 4030080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 213 - 381
Target Start/End: Original strand, 33609625 - 33609792
Alignment:
Q  213 gacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaac 312  Q
    ||||||||||| | ||||||||| |||||||||||| |||    |||||||||  ||||||||| ||| ||||||||||||||||  ||||||||| |||    
T  33609625 gacctaaaagcacatggtttcttttggaacattctagtgatgtattgcttagggcttaagtcgatata-gactataaataaagtagatagctatcataac 33609723  T
Q  313 aaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  33609724 aattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 33609792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 209 - 384
Target Start/End: Complemental strand, 3376681 - 3376506
Alignment:
Q  209 ttttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatca 308  Q
    |||||||| |||||||||   ||||||||||||||||||| |||    ||||||||||||||||||||    | |||||||||| |||| ||||| ||||    
T  3376681 ttttgaccaaaaagcccgcaatttcttgtggaacattctagtgatgtcttgcttaggttttaagtcgaatgtaaactataaatagagtagctagccatca 3376582  T
Q  309 caacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3376581 caacaaatcatcttttgttcttggaagtaataagtgacaattgtttctttgaataaaagttcacctttattttatg 3376506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 174 - 368
Target Start/End: Original strand, 9311391 - 9311586
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||||||||||||||||    ||||||| ||| |||||||| |||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  9311391 cttttgctgcttttgcttcagaaacaagctacctgttttgaccaaaaagcccgtggtttcttgtagaacattctattgaatagtttcttaggttttaagt 9311490  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagt 368  Q
    ||| ||||||||||||||| |||| | ||||||||  |  | ||||||||| || |  ||| | |||||||||||||||| | ||| |||||||||    
T  9311491 cgatataagactataaatatagtagcgagctatcaataacattcatcttttatttttggaattcaataagtgacaattgtctttcttaataaaagt 9311586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 174 - 368
Target Start/End: Complemental strand, 9258862 - 9258667
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||     ||||||| ||| |||||||| |||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  9258862 cttttgctgcttttgctttagaaacaagctacctgttttgaccaaaaagcccgtggtttcttgtagaacattctattgaatagtttcttaggttttaagt 9258763  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagt 368  Q
    ||| ||||||||||||||| |||| | ||||||||  |  | ||||||||| || |  ||| | |||||||||||||||| | ||| |||||||||    
T  9258762 cgatataagactataaatatagtagcgagctatcaataacattcatcttttatttttggaattcaataagtgacaattgtctttcttaataaaagt 9258667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 14941893 - 14941738
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    |||||||||||| |||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  14941893 tttcttgtggaatattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 14941794  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14941793 tctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 14941738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 15369486 - 15369331
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    |||||||||||| |||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  15369486 tttcttgtggaatattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 15369387  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15369386 tctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 15369331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 33612433 - 33612278
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||| ||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  33612433 tttcttgtgaaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 33612334  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33612333 tctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 33612278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 381
Target Start/End: Complemental strand, 17206576 - 17206408
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    ||||||||| ||||||||||||||||||||||||||| ||| ||| || ||||||  |||||||    ||| |||||||||| |||| ||||| ||||||    
T  17206576 tgacctaaatgcccgtggtttcttgtggaacattctagtgatatattt-cttagggcttaagtcattgtaa-actataaatagagtagctagcaatcaca 17206479  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    |||| ||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  17206478 acaattcatcttttgttcttggaaataataagtgacaattgtctctttgaataaaagttcatctttatttt 17206408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 257 - 377
Target Start/End: Complemental strand, 16076964 - 16076844
Alignment:
Q  257 ttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttct 356  Q
    |||||||| |||||||| || | || |||||||||| |||| ||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  16076964 ttgcttagattttaagttgaaacaaaactataaatagagtagctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttct 16076865  T
Q  357 ctgaataaaagttcaccttta 377  Q
     ||||||||||||||||||||    
T  16076864 ttgaataaaagttcaccttta 16076844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 648950 - 648795
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| ||  |||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  648950 tttcttgtggaacattctagtgatgtaattgcttagattcaaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 648851  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  648850 tctgaaataataagtgacaattgtttctttgaataaaagttaacctttattttatg 648795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 15707404 - 15707249
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||||||||    | ||||||| || ||||  |||| |||||||  | |||||||||||||    
T  15707404 tttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataattagagtaggtagccatcacaaatattcatcttttgttc 15707305  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15707304 tctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 15707249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 233 - 384
Target Start/End: Complemental strand, 48340749 - 48340601
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||| | |||||||  | |||||||||||||||||    
T  48340749 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctatccatcacaaatattcatcttttgttctctg 48340654  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  48340653 aaataataagtgacaattgtttctttgaataaaagttcaacctttattttatg 48340601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 233 - 384
Target Start/End: Complemental strand, 16097571 - 16097424
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||| ||  | || ||||||||||||||    
T  16097571 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcaaaaatattcgtcttttgttctctg 16097476  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  16097475 aaataagaagtgacaattgtttctttgaataaaagttcacctttattttatg 16097424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 48355695 - 48355594
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttta 382  Q
    |||||||||| |||| ||||| |||||||  | |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  48355695 actataaatagagtagctagccatcacaaatattcatcttttgttctttgaaataataagtgacaattgtttatttgaataaaagttcacctttatttta 48355596  T
Q  383 tg 384  Q
    ||    
T  48355595 tg 48355594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 384
Target Start/End: Original strand, 41722616 - 41722784
Alignment:
Q  218 aaaagcccgtggtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaat 316  Q
    |||||||||  |||||||||||||||||||| |||  || |||||||| || ||||||||    | ||| |||||| |||| ||||| |||||||  | |    
T  41722616 aaaagcccgcagtttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactgtaaatagagtagctagccatcacaaatatt 41722715  T
Q  317 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  41722716 catcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatg 41722784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 233 - 377
Target Start/End: Complemental strand, 782932 - 782792
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||| | |||||||||||    | |||||| ||| |||| ||||| |||||||  | |||||||||||||||||    
T  782932 cttgtggaacattctagtga----ttgcttggattttaagtcgaatgtaaactatatatagagtagctagccatcacaaatattcatcttttgttctctg 782837  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  782836 aaataataagtgacaattgtttctttgaataaaagttcaccttta 782792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 257 - 377
Target Start/End: Original strand, 12561890 - 12562010
Alignment:
Q  257 ttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttct 356  Q
    |||||||| |||||||||||    | |||| ||||| |||| ||||| |||| ||  | |||||||||||||||||||||||||||||||||||||||||    
T  12561890 ttgcttagattttaagtcgaatgtaaactagaaatagagtagctagccatcataaatattcatcttttgttctctgaaataataagtgacaattgtttct 12561989  T
Q  357 ctgaataaaagttcaccttta 377  Q
     ||||||||||||||||||||    
T  12561990 ttgaataaaagttcaccttta 12562010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 377
Target Start/End: Original strand, 12567565 - 12567705
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||| |     
T  12567565 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttctttt 12567660  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  12567661 aaataatatgtgacaattgtttctttgaataaaagttcaccttta 12567705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 314 - 383
Target Start/End: Complemental strand, 4460842 - 4460773
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 383  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4460842 aatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcacctttattttat 4460773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 212 - 329
Target Start/End: Original strand, 48713387 - 48713503
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| ||||||||||||||||||| || |||    ||||||||||||||||||    ||| |||||||||| |||| |||||||||||||    
T  48713387 tgacctaaaagcccatggtttcttgtggaacattatagtgatgtattgcttaggttttaagtcattgtaa-actataaatatagtagctagctatcacaa 48713485  T
Q  312 caaatcatcttttgttct 329  Q
    ||| ||||||||||||||    
T  48713486 caattcatcttttgttct 48713503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 4983230 - 4983163
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  4983230 aatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 4983163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 377
Target Start/End: Original strand, 5840598 - 5840738
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||| ||    | ||||||||||  ||| ||||| |||||||  | |||| |||||||||| |    
T  5840598 cttgtggaacattctagtga----ttgcttagattttaagttgaatgtaaactataaatagcgtagctagccatcacaaatattcatattttgttctcgg 5840693  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  5840694 aaataataagtgacaactgtttctttgaataaaagttcaccttta 5840738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 9264460 - 9264392
Alignment:
Q  317 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  9264460 catcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatg 9264392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 334
Target Start/End: Original strand, 13434793 - 13434914
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    ||||||| |||||| |||||| ||||||||||||||| |||    |||||||||||| ||||||  ||| ||||||||||| |||| | || ||||| ||    
T  13434793 tgacctataagcccttggtttattgtggaacattctagtgatgtattgcttaggtttaaagtcgttata-gactataaatagagtagccagttatcataa 13434891  T
Q  312 caaatcatcttttgttctctgaa 334  Q
    ||| |||||||||||||| ||||    
T  13434892 caattcatcttttgttctttgaa 13434914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 375
Target Start/End: Complemental strand, 4465868 - 4465807
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctt 375  Q
    ||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||| ||||    
T  4465868 aatcatcttttgttctctgaaattaatagtgacaattgtttctttgaataaaagttctcctt 4465807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 329
Target Start/End: Complemental strand, 9194168 - 9194052
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    ||||||||||| || ||||||||||||||| |||||| |||    ||||||||||||||||||    ||| |||||||||| |||| |||||||||||||    
T  9194168 tgacctaaaagaccatggtttcttgtggaatattctagtgatgtattgcttaggttttaagtcattgtaa-actataaatagagtagctagctatcacaa 9194070  T
Q  312 caaatcatcttttgttct 329  Q
    ||| | ||||||| ||||    
T  9194069 caattaatcttttattct 9194052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 13731834 - 13731883
Alignment:
Q  335 ataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  13731834 ataataagtgacaattgtttctttgaataaaagttcaccgttattttatg 13731883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 333 - 375
Target Start/End: Original strand, 4541187 - 4541229
Alignment:
Q  333 aaataataagtgacaattgtttctctgaataaaagttcacctt 375  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  4541187 aaataataagtgacaattgtttctttgaataaaagttcacctt 4541229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 329
Target Start/End: Complemental strand, 16897445 - 16897329
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||||| ||||||||||||||||||||||  |  ||| || ||||||  |||||||    ||| |||||||||| |||| ||||||||||||    
T  16897445 tgacctaaaagcccttggtttcttgtggaacattctagcgttatattt-cttagggcttaagtcattgtaa-actataaatagagtagctagctatcaca 16897348  T
Q  311 acaaatcatcttttgttct 329  Q
    |||| ||||||||||||||    
T  16897347 acaattcatcttttgttct 16897329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 370
Target Start/End: Original strand, 38877414 - 38877468
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||    
T  38877414 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 38877468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 369
Target Start/End: Complemental strand, 48801432 - 48801279
Alignment:
Q  218 aaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaat 316  Q
    |||||||||  |||||||||||||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |    
T  48801432 aaaagcccgcagtttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatatt 48801333  T
Q  317 catcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagtt 369  Q
    |||||||| ||||  ||| | |||||||||||||||| | ||| ||||||||||    
T  48801332 catcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 48801279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 1613964 - 1614036
Alignment:
Q  299 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||| ||||||||||||||||||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  1613964 ctagctatcataacaaatcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagttc 1614036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 327
Target Start/End: Original strand, 5825963 - 5826077
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactg-aatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||||| |||||||||||||||||||||| ||  ||| || ||||||  |||||||    ||| |||||||||| |||| ||||||||||||    
T  5825963 tgacctaaaagcccatggtttcttgtggaacattctagtgttata-tttcttagggcttaagtcattgtaa-actataaatagagtagctagctatcaca 5826060  T
Q  311 acaaatcatcttttgtt 327  Q
    |||| | ||||||||||    
T  5826061 acaatttatcttttgtt 5826077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 366
Target Start/End: Complemental strand, 2325953 - 2325871
Alignment:
Q  285 tataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaa 366  Q
    |||||||| |||| ||||| ||||||| |||||||||||||||||  ||| | |||||||||||||||| | ||| |||||||    
T  2325953 tataaatagagtagctagccatcacaataaatcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaa 2325871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 370
Target Start/End: Complemental strand, 11997523 - 11997370
Alignment:
Q  218 aaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaat 316  Q
    |||||||||  |||||||||||||||||||| |||  || |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  |      
T  11997523 aaaagcccgcagtttcttgtggaacattctagtgatgtaattgcttagattttaagtcgaatgtaaactataaatacagtagctagc-atcacaaatatc 11997425  T
Q  317 catcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  11997424 catcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 11997370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 370
Target Start/End: Original strand, 12199071 - 12199225
Alignment:
Q  218 aaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaat 316  Q
    |||||||||  |||||||||||||||||||| |||  || |||||||| |||||||||||    | |||||||||| |||| ||||| ||||||   | |    
T  12199071 aaaagcccgcagtttcttgtggaacattctagtgatgtaattgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacagatatt 12199170  T
Q  317 catcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
     ||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  12199171 tatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 12199225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 368056 - 368152
Alignment:
Q  257 ttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaa-ataataagtgacaattgt 352  Q
    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  ||||||||||||||||  ||| | ||||||||||||||||    
T  368056 ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaataatcatcttttgttcttggaatacaataagtgacaattgt 368152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 679577 - 679512
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||||   ||||  |||||||||||| ||||| |||||||||||||  |||||||||    
T  679577 tcatcttttgttcttgaaaattctaagtgacaattatttctttgaataaaagttcttctttatttt 679512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 38877310 - 38877346
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  38877310 tgacttaaaagcccatggtttcttgtggaacattcta 38877346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 1e-84; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 174 - 384
Target Start/End: Complemental strand, 43701785 - 43701575
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   ||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43701785 cttttgctgcttttgcttcggaaacaagctacctattttgatctaaaagcccgtggtttcttgtggaacattctagtgaatagttgcttaggttttaagt 43701686  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacc 373  Q
    ||||||||| |||||| || |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  43701685 cgacataaggctataactagagtagctagctatcacaacaattcatcttttgttatctgaaataataagtgacaattgtttctttgaataaaagttcacc 43701586  T
Q  374 tttattttatg 384  Q
    |||||||||||    
T  43701585 tttattttatg 43701575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 174 - 370
Target Start/End: Complemental strand, 16954130 - 16953934
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||||||||||||||||| | ||||||| ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16954130 cttttgctgcttttgcttcg-gaacaagctacctattttgacataaaagctcgtggtttcttgtggaacattctagtgaatagttgcttaggttttaagt 16954032  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||||||||||| |||| |||||||||| ||||| |||||||||||| |  ||| | |||||||||||||||| | ||| |||||||||||    
T  16954031 cgacataagactataaatagagtagctagctatcataacaattcatcttttgttattggaattcaataagtgacaattgtctttcttaataaaagttc 16953934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 156 - 370
Target Start/End: Complemental strand, 39984 - 39769
Alignment:
Q  156 tgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaata 255  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||| ||||||    
T  39984 tgccacctcccaggcctacttttgatgcttttgcttcatggacaagctgcctattttcacctaaaagccagtgttttcgtgtggaacattctagtgaata 39885  T
Q  256 gttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgttt 354  Q
    ||||||||| ||||||||||||||||||||||||||| |||| ||| ||||||  |  | ||||||||||||||  ||| | |||||||||||||||| |    
T  39884 gttgcttagattttaagtcgacataagactataaatagagtagctaactatcattaacattcatcttttgttcttggaattcaataagtgacaattgtct 39785  T
Q  355 ctctgaataaaagttc 370  Q
     ||| |||||||||||    
T  39784 ttcttaataaaagttc 39769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 170 - 370
Target Start/End: Original strand, 9857061 - 9857262
Alignment:
Q  170 cctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggtttt 269  Q
    ||||||||||||||||||||||| || |||||||||||||||||| | |||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  9857061 cctacttttgctgcttttgcttcatgaacaagctgcctattttgatcgaaaagcacgtggtttcttgtggaacattctagtgaatagttgctaaggtttt 9857160  T
Q  270 aagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagt 368  Q
    ||||||||||||||||||||||| |||| ||||||||||  |  | ||||||||| ||||| ||| | |||||||||||||||| | ||| ||| |||||    
T  9857161 aagtcgacataagactataaatagagtagctagctatcattaacattcatcttttattctcggaattcaataagtgacaattgtctttcttaattaaagt 9857260  T
Q  369 tc 370  Q
    ||    
T  9857261 tc 9857262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 31593803 - 31593974
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| |||||||||||||||||||||| |||    |||||||||||||||||||  ||| ||||||||||| |||| |||||||||| ||    
T  31593803 tgacctaaaagcccttggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttata-gactataaatagagtaactagctatcataa 31593901  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  31593902 caattcatcttttgttctttgaaataataagtgacaattgtttctttgaataaaagttcacttttattttatg 31593974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 174 - 369
Target Start/End: Original strand, 7197080 - 7197276
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   ||||||| ||| |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  7197080 cttttgctgcttttgcttcggaaacaagctacctgttttgaccaaaaagcccgtggtttcttgtagaacattctattgaatagttgcttaggttttaagt 7197179  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagtt 369  Q
    ||| ||||||||||||||| |||| ||||||||||  |  | ||||||||| ||||  ||| | |||||||||||||||| | ||| ||||||||||    
T  7197180 cgatataagactataaatagagtagctagctatcaataacattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 7197276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 229 - 384
Target Start/End: Complemental strand, 20059320 - 20059165
Alignment:
Q  229 gtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    |||||||||||||||||||| |||    ||||||||||||||||||||    | |||||||||| |||| ||||  ||||||||||||||||||||||||    
T  20059320 gtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgaatgtaaactataaatagagtaactagtcatcacaacaaatcatcttttgttc 20059221  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20059220 tctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 20059165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 257 - 384
Target Start/End: Complemental strand, 11902751 - 11902625
Alignment:
Q  257 ttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttct 356  Q
    |||||||||||||||||||  ||| ||||||||||| |||| |||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||    
T  11902751 ttgcttaggttttaagtcgttata-gactataaatagagtagctagctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttct 11902653  T
Q  357 ctgaataaaagttcacctttattttatg 384  Q
     | ||||||||||||| |||||||||||    
T  11902652 ttaaataaaagttcacatttattttatg 11902625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 21275158 - 21275313
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||| | |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  21275158 tttcttgtggaacattccagtgatgtaattgcttagattataagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 21275257  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  21275258 tctgaaataataagggacaattgtttctttgaataaaagttcacctttattttatg 21275313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 24125385 - 24125230
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||||| ||    | ||||||||||||||| ||||| |||||||  |  ||||||||||||    
T  24125385 tttcttgtggaacattctagtgatgtaattgcttagattctaagttgaatgtaaactataaataaagtagctagccatcacaaatatccatcttttgttc 24125286  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  24125285 tctgaaataataagtgacaattgtttctttgaataaaagttcatctttattttatg 24125230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 233 - 384
Target Start/End: Original strand, 3355191 - 3355338
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||| |     
T  3355191 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttctata 3355286  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3355287 aaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 3355338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 233 - 384
Target Start/End: Original strand, 18286926 - 18287073
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||||||    
T  18286926 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttctctg 18287021  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||    
T  18287022 aaataataagtgacaattctttctttgaataaaagttcacttttattttatg 18287073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 229 - 377
Target Start/End: Original strand, 6518291 - 6518440
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||||||||||||||||||| | |  || |||||||| |||||||||||    |  |||||||||||||| ||||  |||||||  | ||||||||||||    
T  6518291 gtttcttgtggaacattctagtaatgtaattgcttagattttaagtcgaatgtatgctataaataaagtagctaggcatcacaaatattcatcttttgtt 6518390  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6518391 ctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 6518440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 384
Target Start/End: Original strand, 16951876 - 16951977
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttta 382  Q
    |||||||||| |||| ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  16951876 actataaatagagtagctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataacagttcacctttatttta 16951975  T
Q  383 tg 384  Q
    ||    
T  16951976 tg 16951977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 377
Target Start/End: Complemental strand, 21102396 - 21102247
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||||||||||||||||||| | |  || |||||||| |||||||||||    |   |||||||| |||| ||||| |||||||  | ||||||||||||    
T  21102396 gtttcttgtggaacattctagtaatgtaattgcttagattttaagtcgaatgtatgttataaatagagtagctagccatcacaaatattcatcttttgtt 21102297  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  21102296 ctcttaaataataagtgacaattatttctttgaataaaagttcaccttta 21102247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 229 - 371
Target Start/End: Complemental strand, 11889136 - 11888993
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    ||||||||||||||||||||  ||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | ||||||||||||    
T  11889136 gtttcttgtggaacattctagcgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgtt 11889037  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttca 371  Q
    ||  ||||||||||||||||||||||||| ||||||||||||||    
T  11889036 cttggaaataataagtgacaattgtttctttgaataaaagttca 11888993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 370
Target Start/End: Complemental strand, 12808377 - 12808215
Alignment:
Q  209 ttttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatca 308  Q
    |||||||| |||||||||  |||||||||||||||||||| |||    ||||||| ||||||||||||    | |||||||||| |||| ||| | ||||    
T  12808377 ttttgaccgaaaagcccgcagtttcttgtggaacattctagtgatgtattgcttaagttttaagtcgaatgtaaactataaatagagtagctaaccatca 12808278  T
Q  309 caacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||||||||||||||  ||| | ||||||||| |||||| | ||| |||||||||||    
T  12808277 caacaaatcatcttttgttcttggaattcaataagtgagaattgtctttctcaataaaagttc 12808215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 212 - 329
Target Start/End: Original strand, 10731063 - 10731179
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| || ||||||||||||||||||| |||    ||||||||||||||||||    ||| |||||||||| |||| |||||||||||||    
T  10731063 tgacctaaaagcccatgatttcttgtggaacattctaatgatgtattgcttaggttttaagtcattgtaa-actataaatagagtagctagctatcacaa 10731161  T
Q  312 caaatcatcttttgttct 329  Q
    ||| ||||||||||||||    
T  10731162 caattcatcttttgttct 10731179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 212 - 329
Target Start/End: Original strand, 10944832 - 10944948
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| || ||||||||||||||||||| |||    ||||||||||||||||||    ||| |||||||||| |||| |||||||||||||    
T  10944832 tgacctaaaagcccatgatttcttgtggaacattctaatgatgtattgcttaggttttaagtcattgtaa-actataaatagagtagctagctatcacaa 10944930  T
Q  312 caaatcatcttttgttct 329  Q
    ||| ||||||||||||||    
T  10944931 caattcatcttttgttct 10944948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 384
Target Start/End: Complemental strand, 3772289 - 3772188
Alignment:
Q  286 ataaataaagtatctagctatcacaacaaatcatcttttgttctct--gaaataataagtgacaattgtttctctgaataaaagttca-cctttatttta 382  Q
    ||||||| |||| ||||| |||||||||||| |||||||||  |||  |||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  3772289 ataaatagagtagctagcaatcacaacaaataatcttttgtgttcttggaaataataagtgacaattgcttctttgaataaaagttcaccctttatttta 3772190  T
Q  383 tg 384  Q
    ||    
T  3772189 tg 3772188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 376
Target Start/End: Complemental strand, 33331109 - 33331016
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 376  Q
    |||||||||| |||| ||||| | || | |||||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||    
T  33331109 actataaatagagtagctagcaaacatatcaaatcatctattgttctctgaaattataagtgacaattatttctttgaataaaagttctccttt 33331016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 38652153 - 38652220
Alignment:
Q  313 aaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattt 380  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| |||||||||||||| | ||||||    
T  38652153 aaatcatcttttgttattggaaataataagtgacaattgtttctttgaataaaagttcatccttattt 38652220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 376
Target Start/End: Original strand, 5675465 - 5675527
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 376  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||| |||| |||||    
T  5675465 aatcatcttttgttctctgaaattataagtgacaactgtttctttgaataaatgttctccttt 5675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 370
Target Start/End: Complemental strand, 8092087 - 8091933
Alignment:
Q  218 aaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaat 316  Q
    |||||||||  |||||||||||||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |    
T  8092087 aaaagcccgcagtttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatatt 8091988  T
Q  317 catcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  8091987 catcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 8091933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 11922521 - 11922461
Alignment:
Q  321 ttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    |||||||||  ||||||||||||||||||||||||| | |||||||||||  |||||||||    
T  11922521 ttttgttcttggaaataataagtgacaattgtttcttttaataaaagttcttctttatttt 11922461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 23793781 - 23793741
Alignment:
Q  208 attttgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  23793781 attttgacctaaaagcccatggtttcttgtggaacattcta 23793741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 5513720 - 5513663
Alignment:
Q  314 aatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||||||||   |||| |||||||||||||||||||| |||||||||||||    
T  5513720 aatcatcttttgttcttgtaaattaataagtgacaattgtttctttgaataaaagttc 5513663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 376
Target Start/End: Complemental strand, 23793673 - 23793614
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 376  Q
    ||||||||||||||  ||||| ||||||| ||||||||||| |||||||||||||| ||||    
T  23793673 tcatcttttgttcttggaaattataagtg-caattgtttctttgaataaaagttcatcttt 23793614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 329
Target Start/End: Original strand, 13622291 - 13622334
Alignment:
Q  286 ataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||    
T  13622291 ataaatatagtagctagctatcacaacaattcatcttttgttct 13622334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 370
Target Start/End: Complemental strand, 39043666 - 39043523
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||||||||||||||||||| |||  || |||||||  |||||||||||    | |||||||||| |||| ||||| ||||||   | ||||||||| ||    
T  39043666 gtttcttgtggaacattctagtgatgtaattgcttaaattttaagtcgaatgtaaactataaatagagtagctagccatcacatatattcatcttttatt 39043567  T
Q  328 ctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||  ||| | |||||||||||||||| | ||| |||||||||||    
T  39043566 cttggaattcaataagtgacaattgtctttcttaataaaagttc 39043523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 13622227 - 13622263
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    |||||||||||||| || |||||||||||||||||||    
T  13622227 tgacctaaaagcccttgatttcttgtggaacattcta 13622263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 4e-82; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 174 - 384
Target Start/End: Original strand, 26012850 - 26013060
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  26012850 cttttgctgcttttgcttcggaaacaagctacctattttgacctaaaagcccgtggtttcttgtggaacattctagtgattagttgcttaggttttaagt 26012949  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacc 373  Q
    ||||||||||||||||||| ||||  ||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  26012950 cgacataagactataaatagagtagttagctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcacc 26013049  T
Q  374 tttattttatg 384  Q
    |||||||||||    
T  26013050 tttattttatg 26013060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 156 - 384
Target Start/End: Original strand, 25396787 - 25397016
Alignment:
Q  156 tgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaata 255  Q
    |||||||||| ||| |  ||||||||||||||| ||| ||  | |||||||| |||||||| |||||||||||||||||||| |||||||||| ||||||    
T  25396787 tgccacctcccagggcctcttttgctgcttttgtttcatgatctagctgcctgttttgaccgaaaagcccgtggtttcttgtagaacattctattgaata 25396886  T
Q  256 gttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttc 355  Q
     |||||||||||||||||||| ||||||||||||||| |||| ||||||||||  |  | ||||||||||||||  ||||||||||||||||||||||||    
T  25396887 attgcttaggttttaagtcgatataagactataaatagagtagctagctatcaataacattcatcttttgttcttggaaataataagtgacaattgtttc 25396986  T
Q  356 tctgaataaaagttc-acctttattttatg 384  Q
    | ||||||||||||| ||||||||||||||    
T  25396987 tttgaataaaagttcaacctttattttatg 25397016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 151 - 370
Target Start/End: Original strand, 23455417 - 23455637
Alignment:
Q  151 ggccatgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctact 250  Q
    |||| |||||||||| || ||| |||||| || ||||||||| |||||||||| |||||||||||| |||||| |||||||||||||||||||||||| |    
T  23455417 ggccgtgccacctcccagaccttcttttgttgtttttgcttcatggacaagctacctattttgaccgaaaagctcgtggtttcttgtggaacattctagt 23455516  T
Q  251 gaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaat 349  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||  |  | ||||||||| ||||  ||| | |||||||||||||    
T  23455517 gaatagttgcttaggttttaagtcgacataagactataaatagagtagctatctatcattaacattcatcttttattcttggaattcaataagtgacaat 23455616  T
Q  350 tgtttctctgaataaaagttc 370  Q
    | ||| ||| |||||||||||    
T  23455617 tctttttcttaataaaagttc 23455637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 174 - 329
Target Start/End: Complemental strand, 1990713 - 1990558
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   ||||||| |||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  1990713 cttttgctgcttttgcttcggaaacaagctacctattttgaccgaaaagcccgtggtttcttgtagaacattctagtgaatagttgcttaggttttaagt 1990614  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    | |||||||||||| |||| |||| |||||||||| ||||| ||||||||| ||||    
T  1990613 caacataagactatgaatagagtagctagctatcataacaattcatcttttcttct 1990558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 209 - 384
Target Start/End: Original strand, 6279632 - 6279807
Alignment:
Q  209 ttttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatca 308  Q
    |||||||| |||||||||  |||||||||||||||||||| |||    ||||||||||||||||||||    | |||||||||| |||| ||||||||||    
T  6279632 ttttgaccgaaaagcccgcagtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgaatgtaaactataaatagagtagctagctatca 6279731  T
Q  309 caacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  6279732 caacaattcatcttttgctctctgaaataataagtgacaattgtttctttgaataaaagttctcctttattttatg 6279807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 174 - 370
Target Start/End: Original strand, 22284834 - 22285031
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||| |||||||||||| ||  | |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22284834 cttttgttgcttttgcttcatgatctagctgcctgttttgaccgaaaagcccgtggtttcttgtggaacattctagtgaatagttgcttaggttttaagt 22284933  T
Q  274 cgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
     ||| |||||| ||||||||||||| |||||||||| ||||| ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  22284934 tgacaataaga-tataaataaagtagctagctatcataacaattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 22285031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 174 - 328
Target Start/End: Original strand, 24967145 - 24967299
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||  |||||||| |||||||||  |||||||||| |||||| ||||||||||||||| |||||| |||||||| ||||||||    
T  24967145 cttttgctgcttttgcttcggagacaagctacctattttgtactaaaagcccatggtttattgtggaacattctagtgaatatttgcttagtttttaagt 24967244  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||| |||||||||| ||||| |||||||||||||    
T  24967245 cgacataagactataaatagagtagctagctatcataacaattcatcttttgttc 24967299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 174 - 370
Target Start/End: Original strand, 17126679 - 17126877
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||| ||||||||| ||  | |||||||| |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17126679 cttttgctgattttgcttcatgatctagctgcctgttttgactgaaaagcccgtggtttcttgtgaaacattctactgaatagttgcttaggttttaagt 17126778  T
Q  274 cgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||| ||||||||||||||| |||| ||||| |||||||  | ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  17126779 cgacaataagactataaatagagtagctagccatcacaaatattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 17126877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 175 - 370
Target Start/End: Original strand, 29003491 - 29003688
Alignment:
Q  175 ttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtc 274  Q
    |||||||||||||||||| ||  | |||||||| |||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29003491 ttttgctgcttttgcttcatgatctagctgcctgttttgaccaaaaagtctgtggtttcttgtggaacattctagtgaatagttgcttaggttttaagtc 29003590  T
Q  275 gac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||| ||||||||||||||| |||| ||||||||||  |  | ||||||||||||||  ||| | |||||||||||||||| | ||| | |||||||||    
T  29003591 gacaataagactataaatagagtagctagctatcattaacattcatcttttgttcttggaattcaataagtgacaattgtctttcttactaaaagttc 29003688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 183 - 384
Target Start/End: Complemental strand, 14878501 - 14878297
Alignment:
Q  183 cttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgac-ataa 281  Q
    |||||||||| ||  | |||||||| |||||||| ||||||| ||||||| |||| ||||||| || |||||||||| ||||||||||||||||| ||||    
T  14878501 cttttgcttcatgatccagctgcctgttttgaccgaaaagcctgtggttttttgtagaacattatagtgaatagttggttaggttttaagtcgacaataa 14878402  T
Q  282 gactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaat-aaaagttc-acctttatt 379  Q
    ||||||||||| |||| ||||| |||||||  | ||||||||| ||||   |||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  14878401 gactataaatagagtagctagccatcacaaatattcatcttttcttcttgaaaataataagtgacaattgtttctttgaataaaaagttcaacctttatt 14878302  T
Q  380 ttatg 384  Q
    |||||    
T  14878301 ttatg 14878297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 212 - 380
Target Start/End: Complemental strand, 14162328 - 14162161
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| || ||||||| |||||||    ||| |||||||||| |||| |||||  |||||    
T  14162328 tgacctaaaagcccatggtttcttgtggaacattctagtgatatattt-cttaggtcttaagtcattgtaa-actataaatagagtagctagcagtcaca 14162231  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattt 380  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  14162230 acaaatcatcttttgttctctgaaataataagtgacaattgtttatttgaataaaagttcatctttattt 14162161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 174 - 305
Target Start/End: Original strand, 15759462 - 15759594
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||| ||  | |||||||| |||||||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  15759462 cttttgctgcttttgcttcatgatctagctgcctgttttgaccaaaaagcccatggtttattgtggaacattctagtgaatagttgcttaggttttaagt 15759561  T
Q  274 cgac-ataagactataaataaagtatctagcta 305  Q
    |||| ||||||||||||||| |||| |||||||    
T  15759562 cgacaataagactataaatagagtagctagcta 15759594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 308
Target Start/End: Original strand, 22818097 - 22818230
Alignment:
Q  175 ttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtc 274  Q
    |||| |||||||||||||    ||||||| ||| |||||||| |||||||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  22818097 tttttctgcttttgcttcagaaacaagctacctgttttgaccaaaaagcccgtggtttcttgtagaacattatattgaatagttgcttaggttttaagtc 22818196  T
Q  275 gacataagactataaataaagtatctagctatca 308  Q
    || ||||||||||||||| |||| ||||||||||    
T  22818197 gatataagactataaatagagtagctagctatca 22818230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 384
Target Start/End: Original strand, 18161926 - 18162080
Alignment:
Q  231 ttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    |||||||||||||||||| |||  || |||||||| || ||||||||    | | |||||||| |||||||| | |||||||  | ||||||||||||||    
T  18161926 ttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaattataaatagagtatctacccatcacaaatattcatcttttgttct 18162025  T
Q  330 ctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18162026 ctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 18162080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 23221687 - 23221527
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| ||||||| |||||||||||||| |||    ||||||| |  ||||||||| |||| |||||||||| |||| ||| |||||| ||    
T  23221687 tgacctaaaagcccatggtttcatgtggaacattctagtgatgtattgcttatggcttaagtcgatataa-actataaatagagtagctaactatcataa 23221589  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacc 373  Q
    ||| ||||||||| ||||   |||||||||||||||||||||||| ||||||||||||||||    
T  23221588 caattcatcttttcttcttgaaaataataagtgacaattgtttctttgaataaaagttcacc 23221527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 352
Target Start/End: Complemental strand, 42418710 - 42418565
Alignment:
Q  203 tgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgac-ataagactataaataaagtatcta 301  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||      |||| |||| |||    
T  42418710 tgcctgttttgaccaaaaagcccgtggtttcttgcggaacattctagtgaatagttgcttaggttttaagtcgacaataag------aatagagtagcta 42418617  T
Q  302 gctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgt 352  Q
    ||||||| ||||| ||||||||| ||||  ||| | ||||||||||||||||    
T  42418616 gctatcataacaattcatcttttattcttggaattcaataagtgacaattgt 42418565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 384
Target Start/End: Original strand, 23503050 - 23503228
Alignment:
Q  208 attttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatc 307  Q
    ||||||||| ||||| |||  |||||||| ||||||||||| |||    ||||||||||||||||||||    | |||||||||| |||| ||||| |||    
T  23503050 attttgaccgaaaagtccgcagtttcttgcggaacattctagtgatgtattgcttaggttttaagtcgaatgtaaactataaatagagtagctagccatc 23503149  T
Q  308 acaacaaatcatcttttgttctctgaaataa-taagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    ||||||||||||||||||||||  |||||||  ||| ||||||||||| | ||||||||||| | ||||||||||||||    
T  23503150 acaacaaatcatcttttgttcttggaaataacaaagggacaattgtttgtttgaataaaagtccaacctttattttatg 23503228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 231 - 384
Target Start/End: Complemental strand, 14351800 - 14351645
Alignment:
Q  231 ttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    |||||||||||||||||| |||  || ||| |||| || ||||||||    | |||||||||| |||| ||||| ||||||   | ||||||||||||||    
T  14351800 ttcttgtggaacattctagtgatgtaattgtttagattctaagtcgaatgtaaactataaatagagtagctagccatcacagatattcatcttttgttct 14351701  T
Q  330 ctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
     ||||||||||||||||||||||| || ||||||||||||| ||||||||||||||    
T  14351700 atgaaataataagtgacaattgttcctttgaataaaagttcaacctttattttatg 14351645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 243 - 370
Target Start/End: Complemental strand, 6570701 - 6570572
Alignment:
Q  243 attctactgaatagttgcttaggttttaagtcgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aata 340  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||| || | ||||| |||||||  | ||||||||| ||||  ||| | ||||    
T  6570701 attctagtgaatagttgcttaggttttaagtcgacaataagactataaatagaggagctagccatcacaaatattcatcttttattcttggaattcaata 6570602  T
Q  341 agtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||||| | ||| |||||||||||    
T  6570601 agtgacaattgtctttcttaataaaagttc 6570572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 229 - 377
Target Start/End: Complemental strand, 17515974 - 17515825
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||||||||||||||||||| | |  || |||||||| |||||||||||    |  ||||||||| |||| ||||| |||||||  | |||| |||||||    
T  17515974 gtttcttgtggaacattctagtaatgtaattgcttagattttaagtcgaatgtatgctataaatagagtagctagccatcacaaatattcatattttgtt 17515875  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
     |  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  17515874 ataagaaataataagtgacaattgtttctttgaataaaagttcaccttta 17515825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 384
Target Start/End: Complemental strand, 23194051 - 23193965
Alignment:
Q  299 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttca-cctttattttatg 384  Q
    |||| ||||| ||||| ||||||||||||||  |||||||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  23194051 ctagttatcataacaattcatcttttgttcttggaaataataactgacaattgtttctttgaataaaagttcaccctttattttatg 23193965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 369
Target Start/End: Original strand, 21139574 - 21139730
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    ||||||||||| || |||||||||||||||||||||| |||    || || ||||||||||||    ||| |||||||||| |||| |||||||||||||    
T  21139574 tgacctaaaagtccatggtttcttgtggaacattctagtgatgtattactcaggttttaagtcattgtaa-actataaatagagtagctagctatcacaa 21139672  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagtt 369  Q
    ||| ||||||||||||||  ||| | |  |||||||||||| | ||| ||||||||||    
T  21139673 caattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagtt 21139730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 209 - 329
Target Start/End: Original strand, 9317763 - 9317883
Alignment:
Q  209 ttttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatca 308  Q
    |||||||| ||||||||   |||||||||||||||||||| |||    |||||||||||||| |||||    | |||||||||| |||| ||||| ||||    
T  9317763 ttttgaccgaaaagcccacagtttcttgtggaacattctagtgatgtattgcttaggttttatgtcgaatgtaaactataaatagagtagctagccatca 9317862  T
Q  309 caacaaatcatcttttgttct 329  Q
    |||||||||||||||||||||    
T  9317863 caacaaatcatcttttgttct 9317883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 22904607 - 22904674
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  22904607 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 22904674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 24342067 - 24342123
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  24342067 aatcatcttttgttcttagaaataataagtgacaattgtttcttttaataaaagttc 24342123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 19792309 - 19792242
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    |||||||||| |||||  ||||||||||||||||||||||||| | ||||||| |||| |||||||||    
T  19792309 aatcatctttagttcttggaaataataagtgacaattgtttctttaaataaaaattcatctttatttt 19792242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 18008119 - 18008167
Alignment:
Q  281 agactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    |||||||||||| |||| ||||| ||| |||||||||||||||||||||    
T  18008119 agactataaatagagtagctagcaatcgcaacaaatcatcttttgttct 18008167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 370
Target Start/End: Original strand, 24034637 - 24034724
Alignment:
Q  284 ctataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||| |||| ||||| |||||||  | ||||||||| |||| |||| | |||||||||||||||| | ||| |||||||||||    
T  24034637 ctataaatagagtagctagccatcacaaatattcatcttttattctttgaattcaataagtgacaattgtctttcttaataaaagttc 24034724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 24221630 - 24221563
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    |||||| |||||||||  |||||  |||||||||||| ||||| ||||||||||||||  ||||||||    
T  24221630 aatcattttttgttcttggaaattctaagtgacaattatttctttgaataaaagttcatatttatttt 24221563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 8e-74; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 156 - 384
Target Start/End: Original strand, 24165104 - 24165331
Alignment:
Q  156 tgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaata 255  Q
    |||||||||| | |||| ||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24165104 tgccacctcccatgccttctttttctgcttttgcttcatggacaagttgcgtattttgacctaaaagcccgtggtttcttgtggaacattctactgatta 24165203  T
Q  256 gttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttc 355  Q
    ||| |||||||||||||||  |||||||||||||||| |||| | | ||||||  | | ||||||||||||||||| |||||||||||||||||||||||    
T  24165204 gtttcttaggttttaagtcaccataagactataaatagagtagccatctatcatta-atatcatcttttgttctcttaaataataagtgacaattgtttc 24165302  T
Q  356 tctgaataaaagttcacctttattttatg 384  Q
    | |||||||||||||||||||||||||||    
T  24165303 tttgaataaaagttcacctttattttatg 24165331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 174 - 384
Target Start/End: Complemental strand, 20169678 - 20169468
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   ||||||| |||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||| |||    
T  20169678 cttttgctgcttttgcttcggaaacaagctacctattttgaccgaaaagcccgtgatttcttgtagaacattctagtgaatagttgcttaggttttgagt 20169579  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacc 373  Q
    |||||||||||| |||||| |||| |||||||||||||||| |||||||||||| |  |||| |||||||||||||||||||| ||||||||||| ||||    
T  20169578 cgacataagactttaaatagagtagctagctatcacaacaattcatcttttgttattggaaagaataagtgacaattgtttctttgaataaaagtccacc 20169479  T
Q  374 tttattttatg 384  Q
    |||||||||||    
T  20169478 tttattttatg 20169468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 156 - 370
Target Start/End: Complemental strand, 20725089 - 20724875
Alignment:
Q  156 tgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaata 255  Q
    |||||||||| || || |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  20725089 tgccacctcccagacccacttttgctgcttttgcttcatggacaagctgcctattttgacctaaaagcttgtggtttcttgtggaacattctagtgaata 20724990  T
Q  256 gttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttc 355  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||| | ||||||||||||  ||| | |  |||||||||||| |     
T  20724989 gttgcttaggttttaagtcgacataagactataaatagagtagctagctatcataacaattaatcttttgttcttggaattcaatagtgacaattgtctt 20724890  T
Q  356 tctgaataaaagttc 370  Q
    ||| |||||||||||    
T  20724889 tcttaataaaagttc 20724875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 149 - 370
Target Start/End: Original strand, 12322171 - 12322394
Alignment:
Q  149 acggccatgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    ||||||||||||||||| |||||  ||||||||||||||||||| || || |||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  12322171 acggccatgccacctcccaggccctcttttgctgcttttgcttcatgaactagcttcctgttttgaccgaaaagcccgtggtttcttgtggaacattcta 12322270  T
Q  249 ctgaatagttgcttaggttttaagtcgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgac 346  Q
     |||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||  ||||||||| ||||  ||| | ||||||||||    
T  12322271 gtgaatatttgcttaggttttaagtcgacaataagactataaatagagtagctagctatcataacagttcatcttttattcttagaattcaataagtgac 12322370  T
Q  347 aattgtttctctgaataaaagttc 370  Q
    |||||| | ||| |||||||||||    
T  12322371 aattgtctttcttaataaaagttc 12322394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 175 - 329
Target Start/End: Original strand, 21273508 - 21273662
Alignment:
Q  175 ttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtc 274  Q
    |||||||||||||||||||  ||||| || | ||||||||||||||||| | || |||||| |||||||||||||| ||||||||||||||||||||| |    
T  21273508 ttttgctgcttttgcttcggagacaaactacgtattttgacctaaaagctcatgatttcttttggaacattctactaaatagttgcttaggttttaagcc 21273607  T
Q  275 gacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  21273608 gacataagactataaataaagtagctagctatcataacaattcatcttttgttct 21273662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 174 - 384
Target Start/End: Complemental strand, 17408943 - 17408732
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   ||| ||| |||||||| ||| ||||||  |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  17408943 cttttgctgcttttgcttcggaaacatgctacctattttaaccgaaaagcttgtggtttcttgtagaacattctagtgaatagttgcttaggttttaagt 17408844  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-ac 372  Q
    | ||||||||||||||||| |||| |||||||||| ||  | ||||||||||||||   |||||||||||| |||||||||   | |||||||| || ||    
T  17408843 caacataagactataaatagagtaactagctatcataaacattcatcttttgttcttcaaaataataagtgccaattgttttctttaataaaagatcaac 17408744  T
Q  373 ctttattttatg 384  Q
    ||||||||||||    
T  17408743 ctttattttatg 17408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 174 - 369
Target Start/End: Original strand, 21389536 - 21389733
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaa-gcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaag 272  Q
    |||||||||||||||||||    ||||||| ||| |||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21389536 cttttgctgcttttgcttcagaaacaagctacctgttttgacaaaaaaagcccgtggtttcttgtggaacattctagtgaatagttgcttaggttttaag 21389635  T
Q  273 tcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagtt 369  Q
    |||||||||||||||||||| |||| ||||||||||  | || ||||||||| |||| |||| | ||||| |||||||||| | ||| ||||||||||    
T  21389636 tcgacataagactataaatagagtagctagctatcattaaaattcatcttttattctttgaattcaataactgacaattgtctttcttaataaaagtt 21389733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 370
Target Start/End: Original strand, 23435183 - 23435379
Alignment:
Q  176 tttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcg 275  Q
    ||||||||||||||||| ||  | |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  23435183 tttgctgcttttgcttcatgatctagctgcctgttttgaccgaaaagcccgtggtttcttgtggaacattctagtgaatagttgcttaggtttcaagtcg 23435282  T
Q  276 ac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    || ||||||||||||||| |||| ||||| |||||||  | |||||| || ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  23435283 acaataagactataaatagagtagctagccatcacaaatattcatctcttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 23435379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 370
Target Start/End: Original strand, 23446550 - 23446746
Alignment:
Q  176 tttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcg 275  Q
    ||||||||||||||||| ||  | |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  23446550 tttgctgcttttgcttcatgatctagctgcctgttttgaccgaaaagcccgtggtttcttgtggaacattctagtgaatagttgcttaggtttcaagtcg 23446649  T
Q  276 ac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    || ||||||||||||||| |||| ||||| |||||||  | |||||| || ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  23446650 acaataagactataaatagagtagctagccatcacaaatattcatctcttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 23446746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 370
Target Start/End: Original strand, 21382168 - 21382341
Alignment:
Q  198 caagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagta 297  Q
    |||||| ||| |||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  21382168 caagctacctgttttgaccgaaaaccccgtggtttcttatggaacattctagtgaatagttgcttaggttttaagtcgacataagactataaaaagagta 21382267  T
Q  298 tctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
     ||||||||||  |  | ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  21382268 gctagctatcattaacattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 21382341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 197 - 366
Target Start/End: Complemental strand, 34223320 - 34223150
Alignment:
Q  197 acaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagt 296  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||    |||||||||| |||| ||| ||||| |||||||||| |||    
T  34223320 acaagctacctattttgacctaaaagcccatggtttcttgtggaacattctagtgatgtattgcttaggtcttaactcgtcataaaactataaatagagt 34223221  T
Q  297 atctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaa 366  Q
    | |||||| ||||||||| ||||||||||||||  ||| | |||||||||||||||| | ||| |||||||    
T  34223220 agctagctgtcacaacaattcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaa 34223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 20967674 - 20967829
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  20967674 tttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 20967773  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  20967774 tctgaaataataagtgacaattttttctttgaataaaagttcaactttattttatg 20967829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 23343707 - 23343552
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || ||| |||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  23343707 tttcttgtggaacattctagtgatgtaattgtttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 23343608  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  23343607 tctgaaataataagtgacaattgtttctttgaataaaagttcacttttattttatg 23343552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 381
Target Start/End: Original strand, 15059354 - 15059452
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    |||||||||| |||| ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15059354 actataaatagagtagctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 15059452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 22942354 - 22942437
Alignment:
Q  300 tagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 383  Q
    ||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  22942354 tagctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaatttcacctttattttat 22942437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 384
Target Start/End: Complemental strand, 20916115 - 20915958
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||||||||||||||||||| |||  || |||||||| |||||| ||||    | |||||||||| |||| ||||| |||||||  | ||||||||||||    
T  20916115 gtttcttgtggaacattctagtgatgtaattgcttagattttaattcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgtt 20916016  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    ||  ||||||||||||||||||| ||||| ||||||||||||| || |||||||||||    
T  20916015 cttggaaataataagtgacaattatttctttgaataaaagttcaacatttattttatg 20915958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 377
Target Start/End: Original strand, 24220290 - 24220439
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||||||||||||||||||| | |  || |||||||| |||||||||||    |  ||||||||| |||| ||||  |||||||  | | ||||||||||    
T  24220290 gtttcttgtggaacattctagtaatgtaattgcttagattttaagtcgaatgtatgctataaatagagtagctagtcatcacaaatatttatcttttgtt 24220389  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24220390 ctcggaaataataagtgacaattgtttctttgaataaaagttcaccttta 24220439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 284 - 377
Target Start/End: Original strand, 24214723 - 24214816
Alignment:
Q  284 ctataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    ||||||||| |||| ||||| |||| ||  | | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24214723 ctataaatagagtagctagccatcataaatatttatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcaccttta 24214816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 229 - 377
Target Start/End: Complemental strand, 31057880 - 31057735
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||||||||||||||||||| | |  || |||||||| |||||||||||    |  ||||||||| |||| ||||| |||||||  | ||||||||||      
T  31057880 gtttcttgtggaacattctagtaatgtaattgcttagattttaagtcgaatgtatgctataaatagagtagctagccatcacaaatattcatcttttg-- 31057783  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
      ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  31057782 --ctgaaataataagtgacaattttttctttgaataaaagttcaccttta 31057735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 380
Target Start/End: Original strand, 24166270 - 24166334
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattt 380  Q
    ||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  24166270 tcatcttttgttcttggaaatgataagtgacaattgtttctttgaataaaagttcatctttattt 24166334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 370
Target Start/End: Original strand, 22170762 - 22170851
Alignment:
Q  281 agactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||||||| | ||||| |||| |   | |||||||||||| |||||||| |  |||||||||||||||| |||||||||||||    
T  22170762 agactataaataaagcagctagcaatcatattcattcatcttttgttatctgaaattaatagtgacaattgtttctttgaataaaagttc 22170851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 16677090 - 16677146
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||| ||||||||||| |  |||||||||||||||| |||||||||||||    
T  16677090 aatcatcttttcttctctgaaattaatagtgacaattgtttctttgaataaaagttc 16677146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 23029656 - 23029591
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||||  ||||| ||||||||  ||||||||| |||||||||||||  |||||||||    
T  23029656 tcatcttttgttcttggaaattataagtgaagattgtttctttgaataaaagttcttctttatttt 23029591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 329
Target Start/End: Original strand, 31414527 - 31414641
Alignment:
Q  214 acctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaac 312  Q
    |||||||||||||||||||||||||||| ||||||  || ||| || ||||||  |||| ||    ||| |||||||||| |||| ||||| ||||||||    
T  31414527 acctaaaagcccgtggtttcttgtggaatattctagcgatata-tttcttaggacttaattcattgtaa-actataaatagagtagctagcaatcacaac 31414624  T
Q  313 aaatcatcttttgttct 329  Q
    || ||||||||||||||    
T  31414625 aattcatcttttgttct 31414641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 20738213 - 20738251
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctatttt 212  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  20738213 cttttgctgcttttgcttcttcgacaagctgcctatttt 20738251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 370
Target Start/End: Original strand, 23756722 - 23756810
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||| |||| ||||| |||||||  | ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  23756722 actataaatagagtagctagccatcacaaatattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 23756810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 370
Target Start/End: Original strand, 23822178 - 23822266
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||| |||| ||||| |||||||  | ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  23822178 actataaatagagtagctagccatcacaaatattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 23822266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 8e-68; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 173 - 370
Target Start/End: Complemental strand, 19880326 - 19880128
Alignment:
Q  173 acttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaag 272  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  19880326 acttttgctgcttttgctttatggacaagctgcctattttgacctaaaaccccgtggtttcttgtggaacattctagtgaatagttgcttaggtattaag 19880227  T
Q  273 tcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||  ||| | |||||||||||||| | | ||| |||||||||||    
T  19880226 tcgacataagattataaataaagtagctagctatcacaacaattcatcttttgttcttggaattcaataagtgacaattctctttcttaataaaagttc 19880128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 157 - 384
Target Start/End: Original strand, 41802123 - 41802351
Alignment:
Q  157 gccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatag 256  Q
    ||||||||| ||| |  ||||||||||||||||||| ||  | | |||||| |||||||  ||||| ||||||||||||||| ||||||||| |||||||    
T  41802123 gccacctcccagggcctcttttgctgcttttgcttcatgatctaactgcctgttttgactgaaaagtccgtggtttcttgtgaaacattctagtgaatag 41802222  T
Q  257 ttgcttaggttttaagtcgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttc 355  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||  |  | |||||||||||||| |||||||||||||||||||||||||    
T  41802223 ttgcttaggttttaagtcgacaataagactataaatagagtagctagcaatcattaacattcatcttttgttctatgaaataataagtgacaattgtttc 41802322  T
Q  356 tctgaataaaagttcacctttattttatg 384  Q
    | |||||||||||||||||||||||||||    
T  41802323 tttgaataaaagttcacctttattttatg 41802351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 174 - 384
Target Start/End: Original strand, 28207762 - 28207972
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||||||| |||||||||   ||||||| |||||||||||| |||||||| ||||||||||| |||||||||| ||| |||||||||||| |||||||    
T  28207762 cttttgctgcatttgcttcggaaacaagctacctattttgaccgaaaagcccatggtttcttgtagaacattctagtgagtagttgcttaggctttaagt 28207861  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacc 373  Q
    ||||||||||||| ||||| |||| |||||||||| ||||| |||||||||||| |   |||||||||||||| ||||||| | ||||||||||||||||    
T  28207862 cgacataagactaaaaatagagtagctagctatcataacaattcatcttttgtttttgcaaataataagtgaccattgtttatttgaataaaagttcacc 28207961  T
Q  374 tttattttatg 384  Q
    |||||||||||    
T  28207962 tttattttatg 28207972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 174 - 384
Target Start/End: Original strand, 17986440 - 17986651
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||| |||||||||||||   ||||||| ||| |||||||| ||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  17986440 cttttgttgcttttgcttcggaaacaagctacctgttttgaccaaaaagcctgtggtttcttgtagaacaatctattgaatagttgcttaggttttaagt 17986539  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-ac 372  Q
    ||| |||||||| |||||| |||| ||||||||||  |  | | ||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||    
T  17986540 cgatataagactttaaatagagtagctagctatcaataacatttatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaac 17986639  T
Q  373 ctttattttatg 384  Q
    ||||||||||||    
T  17986640 ctttattttatg 17986651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 174 - 352
Target Start/End: Complemental strand, 52755574 - 52755395
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||  ||||| || |||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52755574 cttttgctgcttttgcttcggagacaatctacctattttgaccgaaaagctcgtggtttcttgtggaacattctagtgaatagttgcttaggttttaagt 52755475  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgt 352  Q
    ||||||||||||||||||| |||| |||||||||| ||  | ||||||||||||||  ||| | ||||||||||||||||    
T  52755474 cgacataagactataaatagagtagctagctatcataaacattcatcttttgttcttggaattcaataagtgacaattgt 52755395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 170 - 370
Target Start/End: Original strand, 25726812 - 25727012
Alignment:
Q  170 cctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggtttt 269  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||| || |||||||||||||||||| |    
T  25726812 cctacttttgctgcttttgcttcatggacaagctgcctattttgaccgaaa-gcccgtagtttcttgtggaacattatagtgaatagttgcttaggttct 25726910  T
Q  270 aagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagt 368  Q
    ||||||||||||||||||||||| |||| ||||||||||  |  |||||| |||| ||||  ||| | |||||||||||||||| | ||| |||||||||    
T  25726911 aagtcgacataagactataaatagagtagctagctatcattaacaatcattttttattcttggaattcaataagtgacaattgtctttcttaataaaagt 25727010  T
Q  369 tc 370  Q
    ||    
T  25727011 tc 25727012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 170 - 370
Target Start/End: Original strand, 25735220 - 25735420
Alignment:
Q  170 cctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggtttt 269  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||| || |||||||||||||||||| |    
T  25735220 cctacttttgctgcttttgcttcatggacaagctgcctattttgaccgaaa-gcccgtagtttcttgtggaacattatagtgaatagttgcttaggttct 25735318  T
Q  270 aagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagt 368  Q
    ||||||||||||||||||||||| |||| ||||||||||  |  |||||| |||| ||||  ||| | |||||||||||||||| | ||| |||||||||    
T  25735319 aagtcgacataagactataaatagagtagctagctatcattaacaatcattttttattcttggaattcaataagtgacaattgtctttcttaataaaagt 25735418  T
Q  369 tc 370  Q
    ||    
T  25735419 tc 25735420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 19875356 - 19875236
Alignment:
Q  173 acttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaag 272  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||||||||    
T  19875356 acttttgctgcttttgcttcatggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctagggaatagattcttaggttttaag 19875257  T
Q  273 tcgacataagactataaataa 293  Q
    |||||||||||||||||||||    
T  19875256 tcgacataagactataaataa 19875236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 17716661 - 17716832
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| ||| |||||||||| ||||||| |||    ||||||||||||||||| |  ||| ||||||||||| |||| |||||||||| ||    
T  17716661 tgacctaaaagcccttggcttcttgtggaccattctagtgatgtattgcttaggttttaagttgttata-gactataaatagagtagctagctatcataa 17716759  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||| | |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17716760 caatttatcttttgttctctaaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 17716832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 174 - 369
Target Start/End: Original strand, 19364534 - 19364730
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||||||||||||||||    ||||||| ||| |||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  19364534 cttttgctgcttttgcttcagaaacaagctacctgttttgaccaaaaagctcgtggtttcttgtagaacattctattgaatagttgcttaggttttaagt 19364633  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagtt 369  Q
    ||| ||||||||||||||| ||||  |||||||||  |  | ||||||||| ||||  ||| | |||||||||||||||| | ||| ||||||||||    
T  19364634 cgatataagactataaatagagtagttagctatcaataacattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagtt 19364730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 212 - 380
Target Start/End: Complemental strand, 13799631 - 13799464
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| || ||||||| |||||||    ||| |||||||||| |||| |||||   ||||    
T  13799631 tgacctaaaagcccatggtttcttgtggaacattctagtgatatattt-cttaggtcttaagtcattgtaa-actataaatagagtagctagcagacaca 13799534  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattt 380  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  13799533 acaaatcatcttttgttctctgaaataataagtgacaattgtttatttgaataaaagttcatctttattt 13799464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 48256221 - 48256392
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| ||||||||| |||||||||||| |||    || ||||||||||||||||  ||| ||||||||||| |||| |||||||| | ||    
T  48256221 tgacctaaaagcccttggtttcttatggaacattctagtgatgtattacttaggttttaagtcgttata-gactataaatagagtagctagctattataa 48256319  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    ||| |||||||||||||| || |||||||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  48256320 caattcatcttttgttct-tggaataataagtaacaattgtttctttgaataaaagttcaacctttattttatg 48256392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 233 - 377
Target Start/End: Original strand, 2386155 - 2386295
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | ||||||||||||||| |    
T  2386155 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttctcgg 2386250  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  2386251 aaataataagtgacaattgtttctttgaataaaagtttaccttta 2386295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 233 - 377
Target Start/End: Complemental strand, 28206518 - 28206378
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | ||||||||||||||| |    
T  28206518 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttctcag 28206423  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||    
T  28206422 aaataataagtgacaattgtttctttgaataaaaattcaccttta 28206378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 377
Target Start/End: Complemental strand, 21792458 - 21792365
Alignment:
Q  284 ctataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    ||||||||| |||| ||||| || ||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21792458 ctataaatagagtagctagccatgacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 21792365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 174 - 369
Target Start/End: Complemental strand, 28764094 - 28763898
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattt-tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaag 272  Q
    |||||||||||| |||||    |||||||| ||||||| |||||||||||||||||||||||||||||||||| || |||    ||||||||||||||||    
T  28764094 cttttgctgcttctgcttgaaagacaagctacctatttctgacctaaaagcccgtggtttcttgtggaacattatagtgatgtattgcttaggttttaag 28763995  T
Q  273 tcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat--aataagtgacaattg-tttctctgaataaaagtt 369  Q
    |||  || | |||||||||| ||||  ||||||||| |||||  ||||||||||||| ||||||  ||| ||||||||||| ||||||| ||||||||||    
T  28763994 tcgttat-atactataaatagagtagttagctatcataacaatccatcttttgttct-tgaaattcaat-agtgacaattgttttctcttaataaaagtt 28763898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 329
Target Start/End: Original strand, 16431477 - 16431593
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||  |||||||||||||||||||||| |||    |||||||||||||||||||| || |||||||||||| |||| |||||||||||||    
T  16431477 tgacctaaaagccattggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgatat-agactataaatagagtagctagctatcacaa 16431575  T
Q  312 caaatcatcttttgttct 329  Q
    ||  |||| |||||||||    
T  16431576 catttcatattttgttct 16431593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 20412167 - 20412346
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataag------actataaataaagtatctagcta 305  Q
    ||||||||| |||  |||||||||||||||||||||| |||    ||||||||||||||||||    |||       |||||||||| |||| |||||||    
T  20412167 tgacctaaatgccaatggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcattctaaagtctaaactataaatagagtagctagcta 20412266  T
Q  306 tcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||||   | |||||||| || ||||||||||||||    
T  20412267 tcacaacaattcatcttttgttcttggaaataataagtgacaattgttttctttaataaaagatcaacctttattttatg 20412346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 377
Target Start/End: Complemental strand, 21784327 - 21784239
Alignment:
Q  289 aataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||| |||| ||||| |||||||  | |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  21784327 aatagagtagctagccatcacaaatattcatcttttgttctctaaaataataagtgacaattgtttctttgaataaaagttcaccttta 21784239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 316 - 384
Target Start/End: Complemental strand, 26134601 - 26134534
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  26134601 tcatcttttgttctctgaaataataagtgacaattgttt-tttgaataaaagttcacctttattttatg 26134534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 229 - 384
Target Start/End: Original strand, 44538166 - 44538321
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||| ||||||||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||  ||||||| |  ||||||||||||    
T  44538166 gtttattgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagtcatcacaatat-tcatcttttgtt 44538264  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||  ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  44538265 ctcaaaaatattaagtgacaattgtttctttgaataaaagttcacctttattttatg 44538321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 329
Target Start/End: Complemental strand, 52236026 - 52235913
Alignment:
Q  216 ctaaaagcccgtggtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaa 314  Q
    |||||||| | |||||||||||||||||||||| |||  || | |||||||||||||||||  ||| ||||||||||| |||| |||||||||| |||||    
T  52236026 ctaaaagctcttggtttcttgtggaacattctagtgatgtattagcttaggttttaagtcgttata-gactataaatagagtagctagctatcataacaa 52235928  T
Q  315 atcatcttttgttct 329  Q
     ||||||||||||||    
T  52235927 ttcatcttttgttct 52235913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 8648876 - 8648944
Alignment:
Q  317 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    |||||||||||||   |||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  8648876 catcttttgttcttgaaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatg 8648944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 39286696 - 39286628
Alignment:
Q  317 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    |||||||||||||  |||| |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  39286696 catcttttgttcttggaaaaaataagtgacaattgtttctttgaataaaagttcaacctttattttatg 39286628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 376
Target Start/End: Complemental strand, 16385030 - 16384968
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 376  Q
    |||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  16385030 aatcgtcttttgttctttgaaattataagtgacaattgtttctttgaataaaagttctccttt 16384968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 370
Target Start/End: Original strand, 22411010 - 22411164
Alignment:
Q  218 aaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaat 316  Q
    |||||||||| ||||||| |||||||||||| |||  || |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | |    
T  22411010 aaaagcccgtagtttcttatggaacattctagtgatgtaattgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatatt 22411109  T
Q  317 catcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||||||  ||| | |||||| ||||||||| | ||| |||||||||||    
T  22411110 catcttttgttcttggaattcaataagagacaattgtctttcttaataaaagttc 22411164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 25405159 - 25405094
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||||  ||||||||||||||||||||||||| | |||||||||||  |||||||||    
T  25405159 tcatcttttgttcttggaaataataagtgacaattgtttcttttaataaaagttcttctttatttt 25405094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 377
Target Start/End: Complemental strand, 30819122 - 30819068
Alignment:
Q  323 ttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||  ||||||||||||||||||||||||| |||||||||||||| |||||    
T  30819122 ttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatcttta 30819068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 370
Target Start/End: Complemental strand, 19788459 - 19788316
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||||||| ||||||||||| |||  || |||||||| |||||||||||    | |||||||||| |||| ||||  |||||||  ||||||||||| ||    
T  19788459 gtttcttgaggaacattctagtgatgtaattgcttagattttaagtcgaatgtaaactataaatagagtagctagtcatcacaaataatcatcttttatt 19788360  T
Q  328 ctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||  ||| | |||||||||||||||| | ||| |||||||||||    
T  19788359 cttggaattcaataagtgacaattgtctttcttaataaaagttc 19788316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 20899472 - 20899426
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaat 362  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||    
T  20899472 tcatcttttgttcttggaaataataagtgacaattgtttctttgaat 20899426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 370
Target Start/End: Complemental strand, 49379833 - 49379679
Alignment:
Q  218 aaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaat 316  Q
    |||||||||  ||| |||||| ||||||||| ||| ||| || ||||| || ||||||||    |||||||||||| |||| ||||| |||||||  | |    
T  49379833 aaaagcccgcagttgcttgtgaaacattctagtgatataattacttagattctaagtcgaatgtagactataaatagagtagctagccatcacaaatatt 49379734  T
Q  317 catcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  49379733 catcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 49379679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 370
Target Start/End: Complemental strand, 36850529 - 36850390
Alignment:
Q  233 cttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctct 331  Q
    |||||||||||||||| |||  || |||||||| |||||||||||      |||||||||| |||| ||||| |||||||  | ||||||||| ||||      
T  36850529 cttgtggaacattctagtgatgtaattgcttagattttaagtcgaatgtcaactataaatagagtagctagccatcacaaatattcatcttttattcttg 36850430  T
Q  332 gaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||| | |||||||||||||||| | ||| |||||||||||    
T  36850429 gaattcaataagtgacaattgtctttcttaataaaagttc 36850390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 383
Target Start/End: Complemental strand, 20860827 - 20860757
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttc-tctgaataaaagttcacctttattttat 383  Q
    |||||||| |||||||  ||||| |  ||||||||||||||| | |||||||||||||| |||||||||||    
T  20860827 aatcatctcttgttcttggaaattaatagtgacaattgtttcctttgaataaaagttcatctttattttat 20860757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 3e-61; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 174 - 329
Target Start/End: Complemental strand, 17284272 - 17284117
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  17284272 cttttgctgcttttgcttcatagacaagctgcctattttgacctaaaagccggtggtttcttctggaacattctagtgaatagttgcttaggttttaagt 17284173  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    ||||||||||||||||||| |||| |||||||||||||||| | ||||||||||||    
T  17284172 cgacataagactataaatagagtagctagctatcacaacaatttatcttttgttct 17284117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 229 - 384
Target Start/End: Complemental strand, 18233976 - 18233820
Alignment:
Q  229 gtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  18233976 gtttcttgtggaacattgtagtgattagttgcttaggttttaagtcgacataagactataaatagagtagctagctatcacaacaattcatcttttgttc 18233877  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    |  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  18233876 ttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatg 18233820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 183 - 370
Target Start/End: Original strand, 8603376 - 8603563
Alignment:
Q  183 cttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataag 282  Q
    |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8603376 cttttgcttcatgtacaagttgcctattttgacctaaaagcccgtggtttcttgtggaacattatactgaatagttgcttaggttttaagtcgacataag 8603475  T
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||| ||||   | |||||| ||||| ||||||||||||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  8603476 actataaatagagtagtcatctatcataacaattcatcttttgttcttggaattcaataagtgacaattgtctttct-aataaaagttc 8603563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 149 - 370
Target Start/End: Complemental strand, 22601598 - 22601376
Alignment:
Q  149 acggccatgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    |||||| |||||||||| || || | ||||| |||||||||||| |||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  22601598 acggccgtgccacctcccagacccatttttgttgcttttgcttcatggacaagctgcttattttgacataaaagcccatggtttcttgtggaacattcta 22601499  T
Q  249 ctgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgaca 347  Q
     |||||||||||||||||||||||| ||||| |   ||||||||||||| |||||||||| ||||| ||||||||||||||  | | | || ||||||||    
T  22601498 gtgaatagttgcttaggttttaagttgacattattttataaataaagtagctagctatcataacaattcatcttttgttcttgggattcaaaaagtgaca 22601399  T
Q  348 attgtttctctgaataaaagttc 370  Q
    ||||| | ||| |||||||||||    
T  22601398 attgtctttcttaataaaagttc 22601376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 329
Target Start/End: Original strand, 6794826 - 6794981
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||||| |||||||||||   |||||||  ||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  6794826 cttttgcttcttttgcttcggaaacaagctatctattttgaccgaaaagctcgtggtttcttgtagaacattctagtgaatagttgcttaggttttaagt 6794925  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  6794926 cgacataagactataaatagagtagctagctatcacaacaattcatcttttgttct 6794981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 180 - 329
Target Start/End: Complemental strand, 5949853 - 5949704
Alignment:
Q  180 ctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacat 279  Q
    |||||||||||||   |||||||| ||||||||||||||||||||| || |||||||||||||||| || ||||||||||||||||||||||||||| ||    
T  5949853 ctgcttttgcttcagagacaagctacctattttgacctaaaagcccatgatttcttgtggaacattatagtgaatagttgcttaggttttaagtcgaaat 5949754  T
Q  280 aagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  5949753 aagactataaataaagtagctagctatcataacaattcatcttttgttct 5949704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 149 - 380
Target Start/End: Original strand, 30245075 - 30245308
Alignment:
Q  149 acggccatgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    |||||| |||||||||| ||| |  ||||||||||||||||||| ||  | |||||||| |||||| | |||||| ||||||||||||||||||||||||    
T  30245075 acggccgtgccacctcccagggcctcttttgctgcttttgcttcatgatctagctgcctgttttgatcgaaaagctcgtggtttcttgtggaacattcta 30245174  T
Q  249 ctgaatagttgcttaggttttaagtcgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgaca 347  Q
     |||||||||| ||||||||||||||||| ||||||||||||||| ||||  || ||||||  |  | |||| |||||||||  ||||||||||||||||    
T  30245175 ttgaatagttgtttaggttttaagtcgacaataagactataaatagagtagttaactatcattaacattcatattttgttcttggaaataataagtgaca 30245274  T
Q  348 attgtttctctgaataaaagttc-acctttattt 380  Q
    ||||||| | ||||||||||||| ||||||||||    
T  30245275 attgtttatttgaataaaagttcaacctttattt 30245308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 156 - 329
Target Start/End: Original strand, 29360167 - 29360340
Alignment:
Q  156 tgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaata 255  Q
    |||||||||||||| |  |||||| ||||||| |||| || ||||||| |  |||||||||||||| || ||||||||||||||||||||||||||||||    
T  29360167 tgccacctcctagggcctcttttgttgcttttccttcatgtacaagctactaattttgacctaaaaacctgtggtttcttgtggaacattctactgaata 29360266  T
Q  256 gttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    ||||||||||||||||||||||||||||||||||||  |||| | | |||||| ||||| ||||||||||||||    
T  29360267 gttgcttaggttttaagtcgacataagactataaattgagtagccatctatcataacaattcatcttttgttct 29360340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 214 - 384
Target Start/End: Original strand, 25949236 - 25949406
Alignment:
Q  214 acctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaaca 313  Q
    |||||||||||| |||||||||||||||||||||| |||    ||||||||||||||||||   ||| ||||||||||| |||| |||||||||| ||||    
T  25949236 acctaaaagcccttggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcattata-gactataaatagagtagctagctatcataaca 25949334  T
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    | ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  25949335 attcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatg 25949406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 174 - 370
Target Start/End: Complemental strand, 20105857 - 20105660
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||| ||||||||||||||   ||||||| | | |||||||| ||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  20105857 ctttttctgcttttgcttcggaaacaagctacatgttttgaccaaaaagcctgtggtttcttgtagaacaatctattgaatagttgcttaggttttaagt 20105758  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||||||||||| |||| ||||||||||  |  | ||||||||||||||  ||| | |||||||||||||||| |  || |||||||||||    
T  20105757 cgacataagactataaatagagtagctagctatcaataacattcatcttttgttcttggaattcaataagtgacaattgtcttacttaataaaagttc 20105660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 25963834 - 25964006
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| | |||||||||||||||||||| |||    |||||||||||||||||||  ||  ||||||||||| |||| |||||||||| ||    
T  25963834 tgacctaaaagcccttagtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttatc-gactataaatagagtagctagctatcataa 25963932  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    ||| ||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  25963933 caattcatcttttgttcttggaaataataagtgacaattgtttctttgaattaaagttcaacctttattttatg 25964006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 25968481 - 25968653
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| | |||||||||||||||||||| |||    |||||||||||||||||||  ||  ||||||||||| |||| |||||||||| ||    
T  25968481 tgacctaaaagcccttagtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttatc-gactataaatagagtagctagctatcataa 25968579  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    ||| ||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  25968580 caattcatcttttgttcttggaaataataagtgacaattgtttctttgaattaaagttcaacctttattttatg 25968653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 17743462 - 17743596
Alignment:
Q  251 gaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaatt 350  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||  |  | ||||||||||||||  |||||||||||||||||||    
T  17743462 gaatagttgcttaggttttaagtcgatataagactataaatagagtagctagctatcaataacattcatcttttgttcttggaaataataagtgacaatt 17743561  T
Q  351 gtttctctgaataaaagttc-acctttattttatg 384  Q
    |||||| ||||||||||||| ||||||||||||||    
T  17743562 gtttctttgaataaaagttcaacctttattttatg 17743596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 233 - 384
Target Start/End: Complemental strand, 18195683 - 18195536
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||||||    
T  18195683 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttctctg 18195588  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18195587 aaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 18195536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 174 - 308
Target Start/End: Complemental strand, 19615421 - 19615286
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||| ||||||||| |||| ||  | |||| ||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19615421 ctttggctgcttttacttcatgatctagcttcctgttttgaccgaaaagcctgtggtttcttgtggaacattctagtgaatagttgcttaggttttaagt 19615322  T
Q  274 cgac-ataagactataaataaagtatctagctatca 308  Q
    |||| ||||||||||||||| |||| ||||||||||    
T  19615321 cgacaataagactataaatagagtagctagctatca 19615286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 233 - 377
Target Start/End: Original strand, 24218650 - 24218790
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | ||||||||||||||| ||||| |||||||  | |||||||||||||||||    
T  24218650 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaataaagtagctagccatcacaaatattcatcttttgttctctg 24218745  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  24218746 aaataataagtgacaattgtttctttgaataaaagttcaccttta 24218790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 257 - 377
Target Start/End: Original strand, 18844416 - 18844536
Alignment:
Q  257 ttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttct 356  Q
    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  18844416 ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttct 18844515  T
Q  357 ctgaataaaagttcaccttta 377  Q
     ||||||||||||||||||||    
T  18844516 ttgaataaaagttcaccttta 18844536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 233 - 377
Target Start/End: Complemental strand, 25402617 - 25402477
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||| ||  | |||||||||||||||||    
T  25402617 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtaactagccatcataaatattcatcttttgttctctg 25402522  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  25402521 aaataataagtgacaattgtttctttgaataaaagttcaccttta 25402477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 229 - 377
Target Start/End: Complemental strand, 210305 - 210156
Alignment:
Q  229 gtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||||||||||||||||||| | |  || |||||||| |||||||||||    |  ||||||||| |||| ||||| |||||||  | ||||||||||||    
T  210305 gtttcttgtggaacattctagtaatgtaattgcttagattttaagtcgaatgtatgctataaatagagtagctagccatcacaaatattcatcttttgtt 210206  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  210205 ctctgaaataatgagtgacaattgtttctttgaataaaagttcaccttta 210156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 18184501 - 18184400
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttta 382  Q
    |||||||||| |||| ||| | |||||||  | || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18184501 actataaatagagtagctatccatcacaaatattcttcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttta 18184402  T
Q  383 tg 384  Q
    ||    
T  18184401 tg 18184400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 233 - 377
Target Start/End: Original strand, 18448700 - 18448845
Alignment:
Q  233 cttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctct 331  Q
    |||||||||||||| | |||  || |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | ||||||||||||||||    
T  18448700 cttgtggaacattccagtgatgtaattgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttctct 18448799  T
Q  332 gaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||    
T  18448800 gtaataataagtgacaattgtttctttgaataaaagttcaccttta 18448845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 329
Target Start/End: Original strand, 29093465 - 29093584
Alignment:
Q  209 ttttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatca 308  Q
    |||||||||||||||| ||||||||||||||||||||||| |||    |||||||||||||||||||  || |||||||||||| |||| ||||||||||    
T  29093465 ttttgacctaaaagcctgtggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttat-agactataaatagagtagctagctatca 29093563  T
Q  309 caacaaatcatcttttgttct 329  Q
     ||||| ||||||||||||||    
T  29093564 taacaattcatcttttgttct 29093584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 235 - 377
Target Start/End: Original strand, 18854556 - 18854694
Alignment:
Q  235 tgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaa 334  Q
    |||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| |||||  ||||||  | |||||||||||||||||||    
T  18854556 tgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccgtcacaaatattcatcttttgttctctgaa 18854651  T
Q  335 ataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    ||| |||||||||||||||||| ||||||||||||||||||||    
T  18854652 atattaagtgacaattgtttctttgaataaaagttcaccttta 18854694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 366
Target Start/End: Original strand, 4740890 - 4741045
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatag-ttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||  || ||||||  |||||||    ||| |||||||||| |||| |||||||||| |    
T  4740890 tgacctaaaagcccgtagtttcttgtggaacattctagtgattatatttcttagggcttaagtcattgtaa-actataaatatagtagctagctatcata 4740988  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattgtt-tctctgaataaaa 366  Q
    |||| ||||||||||||||||||||| |  ||||||||||||| ||| |||||||||    
T  4740989 acaattcatcttttgttctctgaaattaatagtgacaattgttctctttgaataaaa 4741045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 303
Target Start/End: Complemental strand, 25786559 - 25786464
Alignment:
Q  209 ttttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgac-ataagactataaataaagtatctagc 303  Q
    ||||| || ||||||||||||||||||||| ||||||| | ||||||||||| |||||||||||||||| ||||||||||||||| |||| |||||    
T  25786559 ttttggccgaaaagcccgtggtttcttgtgaaacattccagtgaatagttgcgtaggttttaagtcgactataagactataaatagagtagctagc 25786464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 370
Target Start/End: Complemental strand, 25339426 - 25339269
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| || ||||||  |||||||    ||| |||||||||| |||| ||||| ||||||    
T  25339426 tgacctaaaagcccgtggtttcttgtggaacattctagtgatata-tttcttagggcttaagtcattgtaa-actataaatagagtagctagcaatcaca 25339329  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    |||| ||||||||||||||  ||| | |  |||||||||||| | ||| |||||||||||    
T  25339328 acaattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttc 25339269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 20222915 - 20222980
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  20222915 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 20222980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 22116899 - 22116964
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  22116899 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 22116964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 329
Target Start/End: Original strand, 32543169 - 32543285
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| |||||||||||||||||| ||| |||    |||||||||||||||||||  || |||||||||||| |||| |||||||||| ||    
T  32543169 tgacctaaaagcccttggtttcttgtggaacatcctagtgatgtattgcttaggttttaagtcgttat-agactataaatagagtagctagctatcataa 32543267  T
Q  312 caaatcatcttttgttct 329  Q
     || ||||||||| ||||    
T  32543268 taattcatcttttattct 32543285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 370
Target Start/End: Original strand, 25774939 - 25775093
Alignment:
Q  218 aaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaat 316  Q
    |||||||||  |||||||||||||||||||| |||  || |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | |    
T  25774939 aaaagcccgcagtttcttgtggaacattctagtgatgtaattgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatatt 25775038  T
Q  317 catcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  25775039 catcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagttc 25775093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 329
Target Start/End: Complemental strand, 19570189 - 19570068
Alignment:
Q  209 ttttgacctaaaagcccgtggtttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatc 307  Q
    |||||||| |||||||||  |||||||||||||||||||| |||  || |||||||| |||||||||||  | | |||||||||| |||| ||||| |||    
T  19570189 ttttgaccaaaaagcccgcagtttcttgtggaacattctagtgatgtaattgcttagattttaagtcgaatttaaactataaatagagtagctagccatc 19570090  T
Q  308 acaacaaatcatcttttgttct 329  Q
    ||||  | ||||||||||||||    
T  19570089 acaaatattcatcttttgttct 19570068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 369
Target Start/End: Complemental strand, 23348264 - 23348176
Alignment:
Q  281 agactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagtt 369  Q
    |||||||||||| |||| ||||| ||||||   | ||||||||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  23348264 agactataaatagagtagctagcaatcacatttattcatcttttgttctctgaaattaatagtgacaattgtttctttgaataaaagtt 23348176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 12660546 - 12660479
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||| ||||   |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  12660546 aatcatctttttttcttgaaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 12660479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 376
Target Start/End: Original strand, 18993103 - 18993266
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| || ||||||  |||||||    ||| |||||||||| |||| ||||||||||||    
T  18993103 tgacctaaaagcccatggtttcttgtggaacattctagtgatata-tttcttagggcttaagtcattgtaa-actataaatagagtagctagctatcaca 18993200  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattg-tttctctgaataaaagttcaccttt 376  Q
    || | ||||||||||||||  ||| | |  ||||||||||| ||||||| ||||||| ||| |||||    
T  18993201 ac-attcatcttttgttcttggaattcaatagtgacaattgttttctcttaataaaatttctccttt 18993266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 370
Target Start/End: Complemental strand, 24545791 - 24545634
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    ||||||||||||| ||| ||||||||||||||||||| |||    || |||||   |||||||    ||| |||||||||| |||| |||||||||||||    
T  24545791 tgacctaaaagcctgtgttttcttgtggaacattctagtgatgtatttcttagagcttaagtcattgtaa-actataaatagagtagctagctatcacaa 24545693  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    ||| ||||||||||||||  ||| | |  |||||||||||| | ||| |||||||||||    
T  24545692 caattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttc 24545634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 370
Target Start/End: Complemental strand, 25923566 - 25923409
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    ||||||||||||  ||||||||||||||||||||||| |||    || ||||||  ||||||| |  ||| |||||||||| |||| ||||| |||| ||    
T  25923566 tgacctaaaagcttgtggtttcttgtggaacattctagtgatgtatttcttagggcttaagtcaatgtaa-actataaatagagtagctagcaatcataa 25923468  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    ||| ||||||||||||||  ||| | |  |||||||||||| | ||| |||||||||||    
T  25923467 caattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttc 25923409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 329
Target Start/End: Complemental strand, 20218644 - 20218528
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactg-aatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    ||||||||||||||||||||||||||||||||||||  ||  ||| || ||||||  || ||||    ||| |||||||||| |||| ||||||||||||    
T  20218644 tgacctaaaagcccgtggtttcttgtggaacattctggtgttata-tttcttagggcttgagtcattgtaa-actataaatagagtagctagctatcaca 20218547  T
Q  311 acaaatcatcttttgttct 329  Q
    |||| ||||||||||||||    
T  20218546 acaattcatcttttgttct 20218528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 329
Target Start/End: Complemental strand, 22112669 - 22112553
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactg-aatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    ||||||||||||||||||||||||||||||||||||  ||  ||| || ||||||  || ||||    ||| |||||||||| |||| ||||||||||||    
T  22112669 tgacctaaaagcccgtggtttcttgtggaacattctggtgttata-tttcttagggcttgagtcattgtaa-actataaatagagtagctagctatcaca 22112572  T
Q  311 acaaatcatcttttgttct 329  Q
    |||| ||||||||||||||    
T  22112571 acaattcatcttttgttct 22112553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 12658100 - 12658051
Alignment:
Q  332 gaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||||||||    
T  12658100 gaaataataagcgacaattgtttctttgaataaaagttcatctttatttt 12658051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 20221190 - 20221255
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||||  ||||||||||||||||||||||| | |||||||  ||||| |||||||||    
T  20221190 tcatcttttgttcttggaaataataagtgacaattgtttttttgaataagtgttcatctttatttt 20221255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 22115174 - 22115239
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||||  ||||||||||||||||||||||| | |||||||  ||||| |||||||||    
T  22115174 tcatcttttgttcttggaaataataagtgacaattgtttttttgaataagtgttcatctttatttt 22115239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 3923656 - 3923712
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||||||||||||||| |  ||||||||||||| || |||||||||||||    
T  3923656 aatcatcttttgttctctgaaattaatagtgacaattgttactttgaataaaagttc 3923712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 376
Target Start/End: Complemental strand, 16207809 - 16207749
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 376  Q
    |||||||||||| || ||||| ||||||||||||||||||| ||||||||| ||| |||||    
T  16207809 tcatcttttgttttcagaaattataagtgacaattgtttctttgaataaaatttctccttt 16207749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 327
Target Start/End: Original strand, 18627336 - 18627450
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||||| |||||| ||||||||||||||| ||| ||| || ||||||  |||||||    ||| |||||||||| |||| ||||| ||||||    
T  18627336 tgacctaaaagcccatggttttttgtggaacattctaatgatata-tttcttagggcttaagtcattgtaa-actataaatagagtagctagcaatcaca 18627433  T
Q  311 acaaatcatcttttgtt 327  Q
    |||| ||||||||||||    
T  18627434 acaattcatcttttgtt 18627450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 376
Target Start/End: Original strand, 20464386 - 20464446
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 376  Q
    ||||||||||||||   |||| ||||||||||||||||||| ||||||||||||| |||||    
T  20464386 tcatcttttgttcttgaaaattataagtgacaattgtttctttgaataaaagttctccttt 20464446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 370
Target Start/End: Original strand, 19993504 - 19993660
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||| || | ||||| |||||||    ||| ||||| |||| |||| |||||||||| |    
T  19993504 tgacctaaaagctcgtggtttcttgtggaacattctagtgatata-tttcataggtcttaagtcattgtaa-actat-aatagagtagctagctatcata 19993600  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    |||| ||||||||||||||  ||| | |  |||||||||||| | |||  ||||||||||    
T  19993601 acaattcatcttttgttcttggaattcaatagtgacaattgtctttcttcataaaagttc 19993660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 31965626 - 31965575
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaag 367  Q
    ||||||||||||||  ||||| ||||||||||||||||||| ||||||||||    
T  31965626 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaag 31965575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 370
Target Start/End: Complemental strand, 30671468 - 30671315
Alignment:
Q  218 aaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaat 316  Q
    |||||||||| |||||||||||||||||||| |||  || |||||||| ||| ||||||||   | |||||||||| |||| ||||| |||||||  | |    
T  30671468 aaaagcccgtcgtttcttgtggaacattctagtgatgtaattgcttagatttcaagtcgactgtaaactataaatagagtagctagc-atcacaaatatt 30671370  T
Q  317 catcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||  | |  ||| | |||||||||||||||| | ||| |||||||||||    
T  30671369 catcttttaattttggaattcaataagtgacaattgtctttcttaataaaagttc 30671315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 25031295 - 25031238
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattg-tttctctgaataaaagttc 370  Q
    ||||||||||||||||||||||| |  ||||||||||| ||||| |||||||||||||    
T  25031295 aatcatcttttgttctctgaaattaatagtgacaattgttttctttgaataaaagttc 25031238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 26821858 - 26821929
Alignment:
Q  299 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||| |||| || ||||||| |||||||||  ||| ||||||||||||||| ||||| | |||||||||||    
T  26821858 ctagcaatcataataaatcatattttgttcttggaattaataagtgacaattatttcttttaataaaagttc 26821929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 12660693 - 12660655
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctatttt 212  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  12660693 cttttgctgcttttgcttcttcgacaagctgcctatttt 12660655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 26017930 - 26017966
Alignment:
Q  317 catcttttgttctctgaaataataagtgacaattgttt 354  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26017930 catcttttgttct-tgaaataataagtgacaattgttt 26017966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 26138684 - 26138720
Alignment:
Q  317 catcttttgttctctgaaataataagtgacaattgttt 354  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26138684 catcttttgttct-tgaaataataagtgacaattgttt 26138720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 26157303 - 26157339
Alignment:
Q  317 catcttttgttctctgaaataataagtgacaattgttt 354  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26157303 catcttttgttct-tgaaataataagtgacaattgttt 26157339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 3e-61; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 156 - 370
Target Start/End: Complemental strand, 24177916 - 24177702
Alignment:
Q  156 tgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaata 255  Q
    |||||| ||| || || |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||    
T  24177916 tgccacgtcccagacccacttttgctgcttttgcttgatggacaagctgcctattttgacctaaaagcccgtggtttcttgtgg-acagtctagtgaata 24177818  T
Q  256 gttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgttt 354  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||  ||||||||||||||  ||| | |||||||||||||||| |    
T  24177817 gttgcttaggttttaagtcgatataagactataaatagagtagctagctatcataacatttcatcttttgttcttggaattcaataagtgacaattgtct 24177718  T
Q  355 ctctgaataaaagttc 370  Q
     ||| |||||||||||    
T  24177717 ttcttaataaaagttc 24177702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 174 - 329
Target Start/End: Original strand, 23704132 - 23704287
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  23704132 cttttgctacttttgcttcggaaacaagctgcctattttgaccgaaaagcccgtggtttcttttggaacattctagtgaatagttgcttaggttttaagt 23704231  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    |||||||||||| ||||||||||| ||||||||| ||||||  |||||||||||||    
T  23704232 cgacataagactgtaaataaagtagctagctatcgcaacaatgcatcttttgttct 23704287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 156 - 369
Target Start/End: Complemental strand, 30949505 - 30949290
Alignment:
Q  156 tgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaata 255  Q
    |||||||||| ||| |  |||||||| |||||||||| ||  |||||||||| |||||||| ||||| | ||||||||||||||||||||||| ||||||    
T  30949505 tgccacctcccagggcctcttttgctacttttgcttcatgatcaagctgcctgttttgaccgaaaagtctgtggtttcttgtggaacattctagtgaata 30949406  T
Q  256 gttgcttaggttttaagtcgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtt 353  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||| ||||||||||||||  ||| | ||||||||||||||||     
T  30949405 gttgcttaggttttaagtcgacaataagactataaatagagtagctagctatcataacaattcatcttttgttcttcgaattcaataagtgacaattgtc 30949306  T
Q  354 tctctgaataaaagtt 369  Q
    | ||| ||||||||||    
T  30949305 tttctaaataaaagtt 30949290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 329
Target Start/End: Complemental strand, 23140188 - 23140033
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||||||||| ||||||   |||||| | ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  23140188 cttttgctgcttctgcttctgagacaaggtacctattttgacctaaaagcccatggtttcttctggaacattctagtgaatagttgcttaggttttaagt 23140089  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    ||||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||    
T  23140088 cgacataagactataaatagagtagctagctatcataacaattcatcttttgttct 23140033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 329
Target Start/End: Complemental strand, 23551978 - 23551823
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||||||||| ||||||   |||||| | ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  23551978 cttttgctgcttctgcttctgagacaaggtacctattttgacctaaaagcccatggtttcttctggaacattctagtgaatagttgcttaggttttaagt 23551879  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
    ||||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||    
T  23551878 cgacataagactataaatagagtagctagctatcataacaattcatcttttgttct 23551823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 175 - 329
Target Start/End: Original strand, 24507195 - 24507350
Alignment:
Q  175 ttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttc-ttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||| |||||||| |||| | |||||||||||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||||||||||    
T  24507195 ttttcctgctttttcttcatagacaagctgcctattttgacctaaaagcccgttgttttgttgtggaacattctagtgaatagttgcttaggttttaagt 24507294  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
     |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  24507295 tgacataagactataaataaagtagttagctatcacaacaattcatcttttgttct 24507350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 20281961 - 20282133
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| |||||||||||||||||||||| |||    ||||||||| |||||||||| ||| ||||||||||| |||| || ||||||||||    
T  20281961 tgacctaaaagcccttggtttcttgtggaacattctagtgatgtattgcttagggtttaagtcgatata-gactataaatagagtagctggctatcacaa 20282059  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    ||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  20282060 caattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatg 20282133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 156 - 370
Target Start/End: Original strand, 27744900 - 27745116
Alignment:
Q  156 tgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaata 255  Q
    |||||||||| |||||  |||||||| |||||||||| |  || |||| ||| ||| |||| ||||| ||||||||||||||||||| ||||| ||||||    
T  27744900 tgccacctcccaggccctcttttgctacttttgcttcataaactagctacctgtttagaccaaaaagtccgtggtttcttgtggaacgttctagtgaata 27744999  T
Q  256 gttgcttaggttttaagtcgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtt 353  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||| ||||||||| ||||  ||| | ||||||||||||||||     
T  27745000 gttgcttaggttttaagtcgacaataagactataaatagagtagctagctatcataacaattcatcttttattcttggaattcaataagtgacaattgtc 27745099  T
Q  354 tctctgaataaaagttc 370  Q
    | ||| |||||||||||    
T  27745100 tttcttaataaaagttc 27745116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 174 - 369
Target Start/End: Complemental strand, 29577569 - 29577375
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||||   ||||||| |||||||||||||||||| | |||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  29577569 cttttgctgcttttgcttcggaaacaagctacctattttgacctaaaagtctgtggtttcttgttgaacattctagtgaatagttccttaggttttaagt 29577470  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagtt 369  Q
    |||||||||||  |||||| |||| | |||||||||||||| |||| |||||||||  ||| | ||| |||||||||||| | ||| ||||||||||    
T  29577469 cgacataagac--taaatagagtagcgagctatcacaacaattcattttttgttcttggaattcaatcagtgacaattgtctttcttaataaaagtt 29577375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 157 - 370
Target Start/End: Complemental strand, 20708512 - 20708297
Alignment:
Q  157 gccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatag 256  Q
    ||||||||| ||| |  ||||||||||||||| ||| ||  | |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  20708512 gccacctcccagggcctcttttgctgcttttgattcatgatctagctgcctgttttgaccgaaaagcccgtggtttcttgtggaacattctagtgaatag 20708413  T
Q  257 ttgcttaggttttaagtcgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgttt 354  Q
    |||||| |||||||||||||| ||||||||||||||| |||| ||||||||||  |  | ||||||||| ||||  ||| | |||||||||||||||| |    
T  20708412 ttgcttgggttttaagtcgacaataagactataaatagagtagctagctatcattaacattcatcttttattcttggaattcaataagtgacaattgtct 20708313  T
Q  355 ctctgaataaaagttc 370  Q
     ||| |||||||||||    
T  20708312 ttcttaataaaagttc 20708297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 209 - 384
Target Start/End: Original strand, 539098 - 539277
Alignment:
Q  209 ttttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagcta--- 305  Q
    |||||||| ||||| |||  |||||||||||||||||||| |||    ||||||||||||||||||||    | |||||||||| |||| |||||||       
T  539098 ttttgaccgaaaagtccgcagtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgaatgtaaactataaatagagtagctagctagcc 539197  T
Q  306 -tcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
     |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  539198 atcacaacaaatcatcttttgttttctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 539277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 370
Target Start/End: Original strand, 29563058 - 29563247
Alignment:
Q  183 cttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgac-ataa 281  Q
    |||||||||| ||  | |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  29563058 cttttgcttcatgatctagctgcctgttttgaccgaaaagcccgtggtttcttgtggaacattctagtgaatagttgcttaggttttaagtcgacaataa 29563157  T
Q  282 gactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||| |||| ||||| |||||||  | ||||||||  ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  29563158 gactataaatagagtagctagccatcacaaatattcatctttcattcttggaattcaataagtgacaattgtctttcttaataaaagttc 29563247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 174 - 323
Target Start/End: Complemental strand, 28496930 - 28496780
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||||||||||||| ||  | || || || |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||     
T  28496930 cttttgctgcttttgcttcatgatctaggtgtctgttttgaccgaaaagcccgtggtttcttgtggaacattctagtgaatagttgcttatgttttaagc 28496831  T
Q  274 cgac-ataagactataaataaagtatctagctatcacaacaaatcatcttt 323  Q
    |||| ||||||||||||||| |||| |||||||||| ||||| ||||||||    
T  28496830 cgacaataagactataaatagagtagctagctatcataacaattcatcttt 28496780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 208 - 384
Target Start/End: Original strand, 23340485 - 23340662
Alignment:
Q  208 attttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatc 307  Q
    ||||||||| |||||||||  |||| ||||||| ||||||| |||    ||||||||||||||||||||    | |||||||||| |||| ||||| | |    
T  23340485 attttgaccgaaaagcccgcagttttttgtggagcattctagtgatgtattgcttaggttttaagtcgaatgtaaactataaatagagtagctagccaac 23340584  T
Q  308 acaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  23340585 acaacaaatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatg 23340662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 233 - 384
Target Start/End: Complemental strand, 5499929 - 5499782
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | ||||||||||||||||     
T  5499929 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttctcta 5499834  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5499833 aaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 5499782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 16134355 - 16134200
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||||||||    | | |||||||| |||| ||||| |||||||  | |||||||||||||    
T  16134355 tttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaattataaatagagtagctagccatcacaaatattcatcttttgttc 16134256  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16134255 tttgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 16134200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 233 - 377
Target Start/End: Complemental strand, 42767528 - 42767388
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||| ||||    
T  42767528 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttatctg 42767433  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  42767432 aaataataagtgacaattgtttctttgaataaaagttcaccttta 42767388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 299 - 384
Target Start/End: Original strand, 19929380 - 19929465
Alignment:
Q  299 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19929380 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 19929465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 377
Target Start/End: Complemental strand, 24825094 - 24825000
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||| |||| ||||| |||||||  | ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  24825094 actataaatagagtagctagccatcacaaatattcatcttttgttctctgaaataataagggacaattgtttctttgaataaaagttcaccttta 24825000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 25481304 - 25481463
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||| ||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  25481304 tttcttgtggaacattctagtgatgtaattgcttagattctaaatcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 25481403  T
Q  329 tctgaaat----aataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||||||||    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  25481404 tctgaaataaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 25481463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 25488910 - 25489069
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||| ||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  25488910 tttcttgtggaacattctagtgatgtaattgcttagattctaaatcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 25489009  T
Q  329 tctgaaat----aataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||||||||    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  25489010 tctgaaataaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 25489069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 212 - 330
Target Start/End: Complemental strand, 32441523 - 32441406
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||||| |||||| ||||||||||||||| |||    |||||||||||||||||||  ||| ||||||||||| |||| |||||||||||||    
T  32441523 tgacctaaaagcccttggttttttgtggaacattctagtgatgtattgcttaggttttaagtcgttata-gactataaatagagtagctagctatcacaa 32441425  T
Q  312 caaatcatcttttgttctc 330  Q
    ||| |||||||||||||||    
T  32441424 caattcatcttttgttctc 32441406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 370
Target Start/End: Original strand, 36684187 - 36684349
Alignment:
Q  209 ttttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatca 308  Q
    |||||||| |||||||||  |||||||||||||||||||| |||    ||||||||||||||| ||||    | |||||||||| |||| ||||| ||||    
T  36684187 ttttgaccaaaaagcccgcagtttcttgtggaacattctagtgatgtattgcttaggttttaaatcgaatgtaaactataaatagagtagctagccatca 36684286  T
Q  309 caacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  36684287 caacaaatcatcttttcttcttggaattcaataagtgacaattgtctttcttaataaaagttc 36684349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 377
Target Start/End: Complemental strand, 24820735 - 24820615
Alignment:
Q  257 ttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttct 356  Q
    |||||||| |||||||||||    | |||||||||| ||||  |||| |||||||  | |||||||||||||| |||||||||||| |||||||||||||    
T  24820735 ttgcttagattttaagtcgaatgtaaactataaatagagtagttagccatcacaaatattcatcttttgttctttgaaataataagggacaattgtttct 24820636  T
Q  357 ctgaataaaagttcaccttta 377  Q
     ||||||||||||||||||||    
T  24820635 ttgaataaaagttcaccttta 24820615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 212 - 329
Target Start/End: Original strand, 11391033 - 11391149
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    ||||||||||| || |||||||||||||||||||||| |||    |||||||||||||||||||  || |||||||||||| |||| ||| |||||| ||    
T  11391033 tgacctaaaagtccttggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttat-agactataaatagagtagctaactatcataa 11391131  T
Q  312 caaatcatcttttgttct 329  Q
    ||| ||||||||||||||    
T  11391132 caattcatcttttgttct 11391149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 212 - 329
Target Start/End: Original strand, 11407694 - 11407810
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    ||||||||||| || |||||||||||||||||||||| |||    |||||||||||||||||||  || |||||||||||| |||| ||| |||||| ||    
T  11407694 tgacctaaaagtccttggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttat-agactataaatagagtagctaactatcataa 11407792  T
Q  312 caaatcatcttttgttct 329  Q
    ||| ||||||||||||||    
T  11407793 caattcatcttttgttct 11407810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 212 - 370
Target Start/End: Complemental strand, 41653788 - 41653631
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    ||||||||||| ||||||||||||||||||||||||| ||  ||| || ||||||  |||||||    ||| |||||||||| |||| ||||||||||||    
T  41653788 tgacctaaaagtccgtggtttcttgtggaacattctagtgttatattt-cttagggcttaagtcattgtaa-actataaatagagtagctagctatcaca 41653691  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    |||| ||||||||||||||  ||| | |  |||||||||||| | ||| |||||||||||    
T  41653690 acaattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttc 41653631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 384
Target Start/End: Original strand, 15583821 - 15583890
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttca-cctttattttatg 384  Q
    ||||||||||||||  ||||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  15583821 tcatcttttgttcttggaaataataagtgacaactgtttctttgaataaaagttcaccctttattttatg 15583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 20852132 - 20852199
Alignment:
Q  315 atcatcttttgttctctgaaataataagtgacaattgtttctctgaat-aaaagttcacctttatttt 381  Q
    |||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  20852132 atcatcttttgttcttcgaaataataagtgacaattgtttctttgaataaaaagttcatctttatttt 20852199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 19124409 - 19124344
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    |||||||||||||    |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  19124409 tcatcttttgttcatgaaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 19124344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 370
Target Start/End: Original strand, 32139871 - 32140025
Alignment:
Q  218 aaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaat 316  Q
    |||||||||  |||||||||||||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |    
T  32139871 aaaagcccgcagtttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatatt 32139970  T
Q  317 catcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  32139971 catcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 32140025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 370
Target Start/End: Complemental strand, 23698915 - 23698830
Alignment:
Q  285 tataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||| |||| |||||||||||||||| ||||||||||||||  ||| | |  |||||||||||| | ||| |||||||||||    
T  23698915 tataaatagagtagctagctatcacaacaattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttc 23698830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 352
Target Start/End: Complemental strand, 21525 - 21454
Alignment:
Q  281 agactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgt 352  Q
    |||||||||||| |||| |||||||||||||| | ||||||||||||||  ||| |||  ||||||||||||    
T  21525 agactataaatagagtagctagctatcacaacgattcatcttttgttcttggaattaaatagtgacaattgt 21454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 354
Target Start/End: Complemental strand, 21344660 - 21344523
Alignment:
Q  216 ctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaa 314  Q
    |||||||||||| |||||||||||||||||||| ||  ||| || ||||||  |||||||    || ||||||||||| |||  ||||||||||||||||    
T  21344660 ctaaaagcccgtagtttcttgtggaacattctagtgttatattt-cttagggcttaagtcattgta-gactataaatagagttgctagctatcacaacaa 21344563  T
Q  315 atcatcttttgttctctgaaataataagtgacaattgttt 354  Q
     |||||||||||| |  ||| |||  ||||||||||||||    
T  21344562 ttcatcttttgttattggaattaaatagtgacaattgttt 21344523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 366
Target Start/End: Complemental strand, 24371516 - 24371466
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaa 366  Q
    ||||||||||||||  ||| | ||||||||||||||||||| |||||||||    
T  24371516 tcatcttttgttcttggaatttataagtgacaattgtttctttgaataaaa 24371466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 25337382 - 25337344
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctatttt 212  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  25337382 cttttgctgcttttgcttcttcgacaagctgcctatttt 25337344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 370
Target Start/End: Complemental strand, 25370478 - 25370390
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat--aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||| |||| ||||| |||||||  | ||||||||| |||| ||||||  |||||||||||||||| | ||| |||||||||||    
T  25370478 actataaatagagtagctagccatcacaaatattcatcttttattct-tgaaattcaataagtgacaattgtctttcttaataaaagttc 25370390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 381
Target Start/End: Complemental strand, 19013085 - 19013044
Alignment:
Q  340 aagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||||||| |||||||||||||| | |||||||    
T  19013085 aagtgacaattgtttctttgaataaaagttcatcattatttt 19013044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 24321805 - 24321862
Alignment:
Q  314 aatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||||||||  ||||| |||||||||||||||||| | ||| |||||||||    
T  24321805 aatcatcttttgttcttggaaattaataagtgacaattgtttatttgagtaaaagttc 24321862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 24371621 - 24371585
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    ||||||||||| || ||||||||||||||||||||||    
T  24371621 tgacctaaaagtccatggtttcttgtggaacattcta 24371585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 29568671 - 29568639
Alignment:
Q  309 caacaaatcatcttttgttctctgaaataataa 341  Q
    |||||| ||||||||||||||||||||||||||    
T  29568671 caacaattcatcttttgttctctgaaataataa 29568639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 173 - 370
Target Start/End: Complemental strand, 1912 - 1714
Alignment:
Q  173 acttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaag 272  Q
    |||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  1912 acttttgctgcttttgcttcatggacaagctacctaatttgaccgaaaagcccgtggtttcttgtggaacattctagtgaatagtttcttaggttttaag 1813  T
Q  273 tcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||||||||||||| |||| ||||||||||  |  | || |||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  1812 tcgacataagactataaatagagtagctagctatcattaacattcgtcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 1714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 329
Target Start/End: Original strand, 977 - 1132
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    ||||||||| ||||||||||   ||||||| ||| |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  977 cttttgctgtttttgcttcgaaaacaagctacctgttttgacctaaaagcttgtggtttcttgtggaacattctagtgaatagttgcttaggttttaagt 1076  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttct 329  Q
     |||||||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  1077 agacataagactataaatagagtagctagctatcacaacaattcatcttttgttct 1132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 100; Significance: 2e-49; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 174 - 384
Target Start/End: Original strand, 77709 - 77920
Alignment:
Q  174 cttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagt 273  Q
    |||||||||||||||||||    ||||||| ||| |||||||| || |||||||| |||||||| |||||||||| ||||||||||||||||||||||||    
T  77709 cttttgctgcttttgcttcagaaacaagctacctgttttgaccaaagagcccgtgatttcttgtagaacattctattgaatagttgcttaggttttaagt 77808  T
Q  274 cgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-ac 372  Q
    ||| ||||||||||||||| |||| ||||||||||  |  | |||||||||||| |  ||||||||||||||| ||||||||| |  |||||||||| ||    
T  77809 cgatataagactataaatagagtagctagctatcaatagcattcatcttttgttattggaaataataagtgaccattgtttctttatataaaagttcaac 77908  T
Q  373 ctttattttatg 384  Q
    ||||||||||||    
T  77909 ctttattttatg 77920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 230 - 383
Target Start/End: Original strand, 100295 - 100449
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||||||||    | |||||||||| ||||  ||||  ||||||  |||||||||||||||    
T  100295 tttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagttagccctcacaaataatcatcttttgttc 100394  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 383  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  100395 tctgaaataataagtgataattgtttctttgaataaaagttcacctttattttat 100449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 384
Target Start/End: Original strand, 23244 - 23346
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttatttt 381  Q
    |||||||||| |||| ||||| |||||||  | ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  23244 actataaatagagtagctagccatcacaaatattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttatttt 23343  T
Q  382 atg 384  Q
    |||    
T  23344 atg 23346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 384
Target Start/End: Original strand, 199 - 268
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    ||||||||||||||  |||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  199 tcatcttttgttcttggaaatattaagtgacaattgtttctttgaataaaatttcaacctttattttatg 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 149 - 369
Target Start/End: Complemental strand, 191404 - 191182
Alignment:
Q  149 acggccatgccacctcctag-gcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattct 247  Q
    |||||| ||||||| ||||| |||| ||||||||||||||||||| ||  | |||||||  |||||||| ||||||||||||||||||||||||||||||    
T  191404 acggccgtgccaccccctagagcct-cttttgctgcttttgcttcatgatctagctgccagttttgaccgaaaagcccgtggtttcttgtggaacattct 191306  T
Q  248 actgaatagttgcttaggttttaagtcgaca-taagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtga 345  Q
    | ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| |||||||  | ||||||||| ||||  ||| | |||||||||    
T  191305 attgaatagttgcttaggttttaagtcgacattaagactataaatagagtagctagccatcacaaatattcatcttttattcttggaattcaataagtga 191206  T
Q  346 caattgtttctctgaataaaagtt 369  Q
    ||||||| | ||| ||||||||||    
T  191205 caattgtctttcttaataaaagtt 191182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 157 - 370
Target Start/End: Complemental strand, 12586 - 12371
Alignment:
Q  157 gccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattttgacctaaaagcccgtggtttcttgtggaacattctactgaatag 256  Q
    ||||||||| ||| |  ||||||||||||||| ||| ||  | |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  12586 gccacctcccagggcctcttttgctgcttttgattcatgatctagctgcctgttttgaccgaaaagcccgtggtttcttgtggaacattctagtgaatag 12487  T
Q  257 ttgcttaggttttaagtcgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgttt 354  Q
    |||||| |||||||||||||| ||||||||||||||| |||| ||||||||||  |  | ||||||||| ||||  ||| | |||||||||||||||| |    
T  12486 ttgcttgggttttaagtcgacaataagactataaatagagtagctagctatcattaacattcatcttttattcttggaattcaataagtgacaattgtct 12387  T
Q  355 ctctgaataaaagttc 370  Q
     ||| |||||||||||    
T  12386 ttcttaataaaagttc 12371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 48716 - 48871
Alignment:
Q  230 tttcttgtggaacattctactgaat-agttgcttaggttttaagtcgac-ataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    ||||||||||||||||||| ||| | | |||||||| || ||||||||  |||| |||||||||| ||||  |||| |||||||  | ||||||||||||    
T  48716 tttcttgtggaacattctagtgatttaattgcttagattctaagtcgaatataa-actataaatagagtacttagccatcacaaatattcatcttttgtt 48814  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48815 ctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 48871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 6344 - 6499
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  6344 tttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 6443  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    || ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6444 tcggaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 6499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 10958 - 11113
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  10958 tttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 11057  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    || ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11058 tcggaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 11113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 8953 - 9108
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  8953 tttcttgtggaacattctagtgatgtaattgcttagattctaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 9052  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    || ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9053 tcggaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 9108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 3421 - 3594
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||||| | ||||||||| |||||||||||| |||    |||||||||||||||||||| || |||||||||||| |||| ||||||||||  |    
T  3421 tgacctaaaagcgcttggtttcttttggaacattctagtgatgtattgcttaggttttaagtcgatattagactataaatagagtagctagctatcagta 3520  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
      | ||||||||| ||||  ||||||||||||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  3521 acattcatcttttcttcttggaaataataagtgacaattgtctctttgaataatagttcaacctttattttatg 3594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 9200 - 9099
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttta 382  Q
    |||||||||| |||| ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9200 actataaatagagtagctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttta 9101  T
Q  383 tg 384  Q
    ||    
T  9100 tg 9099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 384
Target Start/End: Complemental strand, 19109 - 18953
Alignment:
Q  229 gtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgtt 327  Q
    |||||||||||||||||||| ||| ||| |||||||| || ||||||||    | | |||||||| |||| ||||| |||| ||  | |||||||| |||    
T  19109 gtttcttgtggaacattctagtgatataattgcttagattctaagtcgaatgtaaaatataaatagagtagctagccatcaaaaatattcatctttagtt 19010  T
Q  328 ctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19009 ctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 18953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 9973 - 9818
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||||| ||    | ||||||||||||||| ||||| |||||||  |  ||||||||||||    
T  9973 tttcttgtggaacattctagtgatgtaattgcttagattctaagttgaatgtaaactataaataaagtagctagccatcacaaatatccatcttttgttc 9874  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  9873 tctgaaataataagtgacaattgtttctttgaataaaagttcatctttattttatg 9818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 212 - 383
Target Start/End: Complemental strand, 9037 - 8875
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||| | | |||||||||||||||||||||| |||    |||||||||||||||||||  ||| ||||||||||| |||| |||||||||| ||    
T  9037 tgacctaaaaactcttggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttata-gactataaatagagtagctagctatcataa 8939  T
Q  312 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 383  Q
    |||        ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  8938 caa--------ttgttctatgaaataataagtgacaattgtttctttgaataaaagttcatctttattttat 8875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 377
Target Start/End: Original strand, 27349 - 27443
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||| |||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27349 actataaatagagtagctagccatcacaaataatcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 27443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 377
Target Start/End: Original strand, 39345 - 39439
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||| |||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39345 actataaatagagtagctagccatcacaaataatcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 39439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 233 - 377
Target Start/End: Complemental strand, 2101 - 1961
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | ||||||||||||||| |    
T  2101 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttctcgg 2006  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  2005 aaataataagtgacaattgtttctttgaataaaagttcaccttta 1961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 233 - 377
Target Start/End: Complemental strand, 425183 - 425043
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | ||||||||||||| |||    
T  425183 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttccctg 425088  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  425087 aaataataagtgacaattgtttctttgaataaaagttcaccttta 425043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 370
Target Start/End: Original strand, 520672 - 520815
Alignment:
Q  227 tggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttg 325  Q
    |||||||||||||||||||||| ||| ||| || ||| ||  |||||| |  |||| |||||||||| |||| ||||| |||||||||| ||||||||||    
T  520672 tggtttcttgtggaacattctagtgatatattt-cttggggcttaagttgttataa-actataaatagagtagctagcaatcacaacaattcatcttttg 520769  T
Q  326 ttctctgaaataataagtgacaattg-tttctctgaataaaagttc 370  Q
    || |  ||| | |  ||||||||||| ||||||| |||||||||||    
T  520770 ttattggaattcaatagtgacaattgttttctcttaataaaagttc 520815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 370
Target Start/End: Complemental strand, 82721 - 82631
Alignment:
Q  281 agactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||||| |||||||||| | || |   |||||||||||||| |  ||||| |||||||||| ||||||||| |||||||| ||||    
T  82721 agactataaatagagtatctagcaaacatattcaatcatcttttgtttttggaaattaataagtgaccattgtttctttgaataaaggttc 82631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 233 - 384
Target Start/End: Complemental strand, 17801 - 17654
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||||||| |||||||||||    | |||||||||| ||||  |||| |||||||  | |||||||| |||||| |    
T  17801 cttgtggaacattctagtga----ttgcttagattttaagtcgaatgtaaactataaatagagtagatagccatcacaaatattcatctttggttctcgg 17706  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17705 aaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 17654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 377
Target Start/End: Complemental strand, 21808 - 21715
Alignment:
Q  284 ctataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    ||||||||| |||||||| | |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21808 ctataaatagagtatctacccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 21715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 377
Target Start/End: Complemental strand, 26955 - 26862
Alignment:
Q  284 ctataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    ||||||||| |||| ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26955 ctataaatagagtagctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 26862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 233 - 377
Target Start/End: Original strand, 48328 - 48468
Alignment:
Q  233 cttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctg 332  Q
    |||||||||||||||| |||    |||| ||| |||||||||||    | |||||||||| |||| ||||| |||||||  | ||||||||||||| |||    
T  48328 cttgtggaacattctagtga----ttgcatagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttccctg 48423  T
Q  333 aaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  48424 aaataataagtgacaattgtttctttgaataaaagttcaccttta 48468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1323 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold1323
Description:

Target: scaffold1323; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 377
Target Start/End: Complemental strand, 2016 - 1922
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||| |||| ||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2016 actataaatagagtagctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcaccttta 1922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 377
Target Start/End: Original strand, 2488 - 2582
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||| |||| ||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2488 actataaatagagtagctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcaccttta 2582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 164025 - 163924
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttta 382  Q
    |||||||||| |||| ||| | ||||||   | |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  164025 actataaatagagtagctaaccatcacatatattcatcttttgttctgtgaaataataagtgacaattgtttctttgaataaaagttcacctttatttta 163926  T
Q  383 tg 384  Q
    ||    
T  163925 tg 163924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 370
Target Start/End: Original strand, 172645 - 172803
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcaca 310  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||| || ||| ||  |||||||    ||| |||||||||| |||| ||||| ||||||    
T  172645 tgacctaaaagcccgtggtttcttctggaacattctagtgatatattt-cttggggcttaagtcattgtaa-actataaatagagtagctagcaatcaca 172742  T
Q  311 acaaatcatcttttgttctctgaaataataagtgacaattg-tttctctgaataaaagttc 370  Q
    |||| ||||||||||||||  ||| | |  ||||||||||| ||||||| |||||||||||    
T  172743 acaattcatcttttgttcttggaattcaatagtgacaattgttttctcttaataaaagttc 172803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 230 - 377
Target Start/End: Complemental strand, 38115 - 37967
Alignment:
Q  230 tttcttgtggaacattctactgaa-tagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttc 328  Q
    ||||||||||||||||||| |||  || |||||||| || ||||||||    | |||||||||| |||| ||||| |||||||  | |||||||||||||    
T  38115 tttcttgtggaacattctagtgatgtaattgcttagattctaagtcgattgtaaactataaatagagtagctagccatcacaaatattcatcttttgttc 38016  T
Q  329 tctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||| ||||||||||||||||||||||| | || |||||||||||||||    
T  38015 tctgtaataataagtgacaattgtttctttaaacaaaagttcaccttta 37967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 33972 - 34035
Alignment:
Q  321 ttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 384  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33972 ttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 34035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 377
Target Start/End: Complemental strand, 18901 - 18781
Alignment:
Q  257 ttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttct 356  Q
    |||||||| |||||||||||    | |||||||||| ||||  |||| |||||||  | |||||||||||||| |||||||||||| |||||||||||||    
T  18901 ttgcttagattttaagtcgaatgtaaactataaatagagtagttagccatcacaaatattcatcttttgttctttgaaataataagggacaattgtttct 18802  T
Q  357 ctgaataaaagttcaccttta 377  Q
     ||||||||||||||||||||    
T  18801 ttgaataaaagttcaccttta 18781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 377
Target Start/End: Original strand, 61824 - 61918
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    |||||||||| |||| ||||| |||||||  | ||||||||| ||||||||||||||||||||||||||||||| ||||||||| || |||||||    
T  61824 actataaatagagtagctagccatcacaaatattcatcttttcttctctgaaataataagtgacaattgtttctttgaataaaaattgaccttta 61918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 284 - 377
Target Start/End: Original strand, 19411 - 19504
Alignment:
Q  284 ctataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 377  Q
    ||||||||| |||| ||||| |||||||  | ||||||||||||||| |||||||||||||||||||| |||| |||| |||||||||||||||    
T  19411 ctataaatagagtagctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattggttctttgaacaaaagttcaccttta 19504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 377
Target Start/End: Original strand, 13675 - 13795
Alignment:
Q  257 ttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttct 356  Q
    |||||||| |||||||||||    | |||||||||| |||| ||||| |||||||  | ||||||||||||||| ||||||| ||||||||||||||| |    
T  13675 ttgcttagattttaagtcgaatgtaaactataaatagagtagctagccatcacaaatattcatcttttgttctcggaaataaaaagtgacaattgtttat 13774  T
Q  357 ctgaataaaagttcaccttta 377  Q
     |||||||||||||| |||||    
T  13775 ttgaataaaagttcaacttta 13795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 370
Target Start/End: Original strand, 31496 - 31718
Alignment:
Q  149 acggccatgccacctcctaggcctacttttgctgcttttgcttcgtggacaagctgcctattt-tgacctaaaagcccgtggtttcttgtggaacattct 247  Q
    |||||| ||| |||||| |||  |||||||||||||| ||||||   |  ||||| | ||||| ||||||||||||| ||||||||||||||||||||||    
T  31496 acggccgtgctacctcccaggattacttttgctgcttctgcttcaaaggaaagctacttatttctgacctaaaagcctgtggtttcttgtggaacattct 31595  T
Q  248 actga-atagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaataataagtgac 346  Q
    | |||  ||| ||||||||||| | ||||   | |||||||||||| |||| |||||||||| ||||| | ||||||||||||  ||| |||  ||| ||    
T  31596 agtgatgtag-tgcttaggtttaaggtcgttttgagactataaatagagtagctagctatcataacaattaatcttttgttcttggaattaagtagtaac 31694  T
Q  347 aattgtttctctgaataaaagttc 370  Q
    |||||| | | | |||||||||||    
T  31695 aattgtcttttttaataaaagttc 31718  T

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Target: scaffold0362 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 9285 - 9221
Alignment:
Q  321 ttttgttctctgaaataataagtgacaattgtttctctgaataaaagttca-cctttattttatg 384  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  9285 ttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaccctttattttatg 9221  T

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Target: scaffold0362; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 9339 - 9282
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggtttt 269  Q
    ||||||||||||||||||||||||||||||||||||| |||    |||||||||||||    
T  9339 tgacctaaaagcccgtggtttcttgtggaacattctagtgatgtattgcttaggtttt 9282  T

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Target: scaffold0168 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 8932 - 8864
Alignment:
Q  317 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    ||||||||||||   ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  8932 catcttttgttcgtggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatg 8864  T

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Target: scaffold1559 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 1411 - 1478
Alignment:
Q  314 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 381  Q
    ||||||||||||||||  ||||||||||||||||| ||||||| |||||||||||||| || ||||||    
T  1411 aatcatcttttgttcttggaaataataagtgacaactgtttctttgaataaaagttcatctctatttt 1478  T

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Target: scaffold0057 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 329
Target Start/End: Original strand, 21092 - 21205
Alignment:
Q  214 acctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaaca 313  Q
    |||||||||||  |||||||||||||||||||||| |||    |||||||||||||||||||  |||  |||||||||  |||| |||||||||| ||||    
T  21092 acctaaaagcct-tggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttatac-actataaattgagtagctagctatcataaca 21189  T
Q  314 aatcatcttttgttct 329  Q
    | ||||||||||||||    
T  21190 attcatcttttgttct 21205  T

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Target: scaffold0231 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 212 - 370
Target Start/End: Original strand, 21229 - 21387
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaa 311  Q
    |||||||||| || ||||||||||||||||||||||| |||    |||||||||||||||||| |    | |||||||||| |||| |||| ||||||||    
T  21229 tgacctaaaatcctgtggtttcttgtggaacattctagtgatgtattgcttaggttttaagtc-attgtacactataaatagagtagctagatatcacaa 21327  T
Q  312 ca-aatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
     | ||||||||||||||||  ||| | ||||| |||||||||| | ||| |||||||||||    
T  21328 tagaatcatcttttgttcttggaattcaataa-tgacaattgtctttcttaataaaagttc 21387  T

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Target: scaffold0088 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 370
Target Start/End: Original strand, 38505 - 38559
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 370  Q
    ||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||    
T  38505 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 38559  T

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Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 49904 - 49972
Alignment:
Q  317 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatg 384  Q
    |||||||||||||  |||||||||||||||||||||| || ||| ||||| ||| ||||||||||||||    
T  49904 catcttttgttcttggaaataataagtgacaattgttcctttgagtaaaaattcaacctttattttatg 49972  T

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Target: scaffold0855 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 3478 - 3544
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 383  Q
    ||||||||||||||  ||||| |||||||||||||||||||  ||||||||||||  |||||||||||    
T  3478 tcatcttttgttcttggaaattataagtgacaattgtttcttagaataaaagttc-tctttattttat 3544  T

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Target: scaffold0855; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 3374 - 3410
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    |||||||||||| | ||||||||||||||||||||||    
T  3374 tgacctaaaagctcatggtttcttgtggaacattcta 3410  T

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Target: scaffold0847 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 3643 - 3709
Alignment:
Q  316 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 383  Q
    ||||||||||||||  ||||| |||||||||||||||||||  ||||||||||||  |||||||||||    
T  3643 tcatcttttgttcttggaaattataagtgacaattgtttcttagaataaaagttc-tctttattttat 3709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 3539 - 3575
Alignment:
Q  212 tgacctaaaagcccgtggtttcttgtggaacattcta 248  Q
    |||||||||||| | ||||||||||||||||||||||    
T  3539 tgacctaaaagctcatggtttcttgtggaacattcta 3575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 329
Target Start/End: Complemental strand, 44453 - 44341
Alignment:
Q  216 ctaaaagcccgtggtttcttgtggaacattctactgaatagttgcttaggttttaagtcgacataagactataaataaagtatctagctatcacaacaaa 315  Q
    |||||||| | |||||||||||||||||||||| |||    |||||||| |||||| |     ||| |||||||||| |||| ||||||||||| ||||     
T  44453 ctaaaagctcatggtttcttgtggaacattctagtgatgtattgcttagattttaaattattgtaa-actataaatagagtagctagctatcaccacaat 44355  T
Q  316 tcatcttttgttct 329  Q
    ||||||||||||||    
T  44354 tcatcttttgttct 44341  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 370
Target Start/End: Complemental strand, 14735 - 14647
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||| ||||||||| ||||||||  | ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  14735 actataaatagagtatctagttatcacaaatattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 14647  T

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Target: scaffold0213 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 21657 - 21728
Alignment:
Q  313 aaatcatcttttgttctctgaaataataagtgacaattg-tttctctgaataaaagttcacctttattttat 383  Q
    ||||||||||||||||| |||| | |  ||||||||||| ||||| | |||||||||||| |||||||||||    
T  21657 aaatcatcttttgttctttgaatttaatagtgacaattgttttcttttaataaaagttcatctttattttat 21728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 6774 - 6738
Alignment:
Q  317 catcttttgttctctgaaataataagtgacaattgttt 354  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  6774 catcttttgttct-tgaaataataagtgacaattgttt 6738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 370
Target Start/End: Original strand, 13018 - 13106
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||| |||| ||||  ||||||| || ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  13018 actataaatagagtaactagaaatcacaaaaattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 13106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 370
Target Start/End: Complemental strand, 232380 - 232292
Alignment:
Q  283 actataaataaagtatctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 370  Q
    |||||||||| |||| ||||| |||||||  | ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  232380 actataaatagagtagctagccatcacaaacattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 232292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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