View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11016_high_31 (Length: 249)
Name: NF11016_high_31
Description: NF11016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11016_high_31 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 2930838 - 2931058
Alignment:
| Q |
19 |
gctttcacgttccattcaacaaaagactcatcaagaaacgaatttgattcaaaacccatttttgatttcaacttttcttcataatttctcgagacccact |
118 |
Q |
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| T |
2930838 |
gctttcacgttccattcaacaaaagactcatcaagaaacgaatttgattcaaaacccatttttgatttcaacttttcttcataatttctcgagacccact |
2930937 |
T |
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| Q |
119 |
tgtaaatttggtcaagagaatcattttcctctgttttcccctgtttttcatctccgttttcttctttggtaacggattctaattcaccaaatttttcctt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
2930938 |
tgtaaatttggtcaagagaatcattttcctctgttttcccctgtttttcatctctgttttcttcattggtaacggattctaattcaccaaatttttcctt |
2931037 |
T |
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| Q |
219 |
ttcttcactcttagatctctg |
239 |
Q |
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||||||||||||||||||||| |
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| T |
2931038 |
ttcttcactcttagatctctg |
2931058 |
T |
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