View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11016_high_7 (Length: 524)

Name: NF11016_high_7
Description: NF11016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11016_high_7
NF11016_high_7
[»] chr2 (22 HSPs)
chr2 (327-519)||(41251631-41251823)
chr2 (329-519)||(17445038-17445226)
chr2 (329-519)||(6403801-6403991)
chr2 (329-519)||(42439966-42440156)
chr2 (329-519)||(35962695-35962885)
chr2 (328-519)||(18981596-18981786)
chr2 (333-519)||(31581619-31581805)
chr2 (329-519)||(32127138-32127328)
chr2 (329-486)||(2958131-2958287)
chr2 (329-519)||(16405580-16405770)
chr2 (350-519)||(45418584-45418753)
chr2 (355-515)||(771005-771165)
chr2 (350-519)||(44084600-44084769)
chr2 (368-519)||(12756834-12756985)
chr2 (350-515)||(8147352-8147518)
chr2 (351-519)||(8059330-8059498)
chr2 (332-505)||(2285845-2286018)
chr2 (368-519)||(26162699-26162847)
chr2 (350-457)||(26237958-26238065)
chr2 (373-475)||(4555250-4555354)
chr2 (358-475)||(7072589-7072710)
chr2 (369-424)||(34905969-34906024)
[»] chr3 (21 HSPs)
chr3 (328-515)||(6269427-6269614)
chr3 (329-519)||(22968441-22968631)
chr3 (325-519)||(19390122-19390316)
chr3 (328-519)||(39771769-39771960)
chr3 (333-519)||(34084119-34084305)
chr3 (350-519)||(45182982-45183151)
chr3 (329-519)||(11018209-11018399)
chr3 (350-519)||(6930891-6931060)
chr3 (353-519)||(27935182-27935348)
chr3 (332-519)||(40081738-40081922)
chr3 (350-519)||(33040954-33041123)
chr3 (329-519)||(6503566-6503756)
chr3 (350-500)||(19565517-19565667)
chr3 (350-519)||(45335876-45336044)
chr3 (350-519)||(35514267-35514432)
chr3 (365-475)||(5135285-5135397)
chr3 (333-406)||(22922141-22922214)
chr3 (469-519)||(22922215-22922265)
chr3 (350-449)||(5354710-5354809)
chr3 (482-519)||(5135421-5135458)
chr3 (350-386)||(6890999-6891035)
[»] chr4 (39 HSPs)
chr4 (328-519)||(20129289-20129480)
chr4 (328-519)||(26439276-26439467)
chr4 (329-519)||(34407281-34407471)
chr4 (329-519)||(13012168-13012358)
chr4 (329-519)||(47500753-47500943)
chr4 (328-519)||(25930687-25930878)
chr4 (329-519)||(43355884-43356074)
chr4 (329-519)||(29319702-29319892)
chr4 (333-519)||(36382343-36382528)
chr4 (351-519)||(43143581-43143749)
chr4 (350-519)||(42333773-42333942)
chr4 (352-519)||(3292893-3293060)
chr4 (350-519)||(30216739-30216908)
chr4 (332-519)||(17511230-17511417)
chr4 (332-519)||(40528996-40529185)
chr4 (350-519)||(6690232-6690401)
chr4 (350-519)||(50205074-50205243)
chr4 (351-519)||(48989330-48989498)
chr4 (350-519)||(10352881-10353050)
chr4 (355-517)||(29995982-29996144)
chr4 (368-519)||(44156670-44156821)
chr4 (404-519)||(6235575-6235690)
chr4 (349-519)||(30077628-30077798)
chr4 (352-519)||(28877247-28877414)
chr4 (373-519)||(35545977-35546123)
chr4 (350-503)||(26448054-26448206)
chr4 (384-519)||(1817752-1817887)
chr4 (361-446)||(48129978-48130063)
chr4 (351-475)||(30109958-30110084)
chr4 (427-519)||(13392878-13392970)
chr4 (427-519)||(13396017-13396109)
chr4 (332-434)||(27363344-27363446)
chr4 (351-449)||(45194178-45194276)
chr4 (374-442)||(6254569-6254637)
chr4 (329-390)||(7769308-7769369)
chr4 (350-386)||(49908782-49908818)
chr4 (482-519)||(30110108-30110145)
chr4 (482-519)||(48130111-48130148)
chr4 (350-386)||(5517494-5517530)
[»] scaffold0069 (1 HSPs)
scaffold0069 (329-519)||(17822-18012)
[»] chr7 (23 HSPs)
chr7 (329-519)||(14777104-14777294)
chr7 (328-519)||(5555466-5555657)
chr7 (329-519)||(3114093-3114283)
chr7 (333-519)||(8394109-8394295)
chr7 (333-519)||(36630800-36630986)
chr7 (350-519)||(37002141-37002310)
chr7 (350-519)||(34389053-34389222)
chr7 (350-519)||(8867728-8867897)
chr7 (358-519)||(35090177-35090338)
chr7 (365-519)||(40920000-40920154)
chr7 (353-519)||(26624749-26624916)
chr7 (356-519)||(43184465-43184628)
chr7 (365-515)||(38638237-38638387)
chr7 (350-505)||(33685565-33685720)
chr7 (368-519)||(36658200-36658351)
chr7 (350-519)||(7002726-7002895)
chr7 (350-519)||(7048597-7048766)
chr7 (166-308)||(25151928-25152062)
chr7 (29-145)||(25151802-25151931)
chr7 (408-475)||(10868514-10868583)
chr7 (336-424)||(26502797-26502885)
chr7 (336-424)||(26589829-26589917)
chr7 (362-394)||(10876829-10876861)
[»] chr5 (23 HSPs)
chr5 (329-519)||(36293618-36293808)
chr5 (328-519)||(39434675-39434866)
chr5 (329-519)||(26283315-26283505)
chr5 (332-519)||(10033910-10034097)
chr5 (332-519)||(13817960-13818147)
chr5 (329-519)||(39657503-39657693)
chr5 (368-519)||(16155016-16155167)
chr5 (333-515)||(1776377-1776559)
chr5 (350-519)||(12278857-12279026)
chr5 (350-519)||(17332548-17332717)
chr5 (350-519)||(31680368-31680537)
chr5 (379-519)||(16333873-16334013)
chr5 (351-516)||(19985941-19986106)
chr5 (350-519)||(37254642-37254811)
chr5 (363-519)||(33430335-33430491)
chr5 (329-500)||(3155647-3155818)
chr5 (350-504)||(31501728-31501882)
chr5 (366-519)||(43068894-43069047)
chr5 (351-519)||(36291373-36291541)
chr5 (362-475)||(28801300-28801415)
chr5 (362-434)||(202652-202724)
chr5 (332-385)||(14316641-14316694)
chr5 (482-519)||(28801439-28801476)
[»] scaffold0002 (1 HSPs)
scaffold0002 (329-519)||(480454-480644)
[»] chr6 (13 HSPs)
chr6 (329-519)||(398597-398787)
chr6 (329-519)||(34948755-34948945)
chr6 (328-519)||(13837800-13837991)
chr6 (350-519)||(28996731-28996900)
chr6 (350-519)||(18339107-18339276)
chr6 (355-519)||(29743289-29743453)
chr6 (368-519)||(33229333-33229484)
chr6 (350-445)||(31028435-31028530)
chr6 (350-434)||(24697899-24697983)
chr6 (377-434)||(24695515-24695572)
chr6 (350-385)||(13647018-13647053)
chr6 (377-424)||(24072576-24072623)
chr6 (368-424)||(3050098-3050154)
[»] chr1 (14 HSPs)
chr1 (329-519)||(26144235-26144425)
chr1 (329-519)||(7433425-7433615)
chr1 (336-519)||(32982053-32982236)
chr1 (332-519)||(42310938-42311125)
chr1 (357-519)||(321374-321536)
chr1 (353-519)||(3828988-3829153)
chr1 (350-519)||(35907553-35907722)
chr1 (350-515)||(17445314-17445479)
chr1 (329-455)||(23313218-23313345)
chr1 (332-475)||(41972314-41972458)
chr1 (350-475)||(33489688-33489815)
chr1 (364-434)||(35951427-35951497)
chr1 (368-418)||(48901203-48901253)
chr1 (482-519)||(33489839-33489876)
[»] scaffold2142 (1 HSPs)
scaffold2142 (329-519)||(502-692)
[»] chr8 (16 HSPs)
chr8 (328-519)||(39914494-39914684)
chr8 (332-519)||(29728383-29728570)
chr8 (353-519)||(16788022-16788188)
chr8 (332-517)||(3648793-3648978)
chr8 (333-505)||(15838270-15838441)
chr8 (329-519)||(34136822-34137012)
chr8 (350-519)||(4404009-4404178)
chr8 (350-519)||(23402109-23402278)
chr8 (350-519)||(36408552-36408721)
chr8 (371-519)||(9877242-9877390)
chr8 (350-519)||(2729193-2729362)
chr8 (368-475)||(3435288-3435397)
chr8 (381-517)||(42230971-42231105)
chr8 (372-442)||(40470567-40470637)
chr8 (350-434)||(10397122-10397206)
chr8 (482-519)||(40470472-40470509)
[»] scaffold0041 (1 HSPs)
scaffold0041 (365-519)||(52941-53095)
[»] scaffold0502 (1 HSPs)
scaffold0502 (350-519)||(5231-5400)
[»] scaffold0154 (1 HSPs)
scaffold0154 (350-519)||(31481-31650)


Alignment Details
Target: chr2 (Bit Score: 181; Significance: 1e-97; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 327 - 519
Target Start/End: Complemental strand, 41251823 - 41251631
Alignment:
Q  327 gtcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatt 426  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41251823 gtcatgggcggttctaccgtgtagtgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatt 41251724  T
Q  427 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41251723 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 41251631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 17445226 - 17445038
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||||| |||||| |||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  17445226 catgggcggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacattta 17445129  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17445128 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 17445038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 6403991 - 6403801
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  6403991 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 6403892  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6403891 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 6403801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 329 - 519
Target Start/End: Original strand, 42439966 - 42440156
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42439966 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacattta 42440065  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||| |||||    
T  42440066 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcatgtctct 42440156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 329 - 519
Target Start/End: Original strand, 35962695 - 35962885
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  35962695 catgggcggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacattta 35962794  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  35962795 caaaaagaaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 35962885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 328 - 519
Target Start/End: Original strand, 18981596 - 18981786
Alignment:
Q  328 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 427  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  18981596 tcatgggcggttctaccgtatggcgaccc-gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacattt 18981694  T
Q  428 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| ||||| | ||||| |||||    
T  18981695 acaaaaagaaaaatttgggcaatttaaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcatgtctct 18981786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 333 - 519
Target Start/End: Complemental strand, 31581805 - 31581619
Alignment:
Q  333 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 432  Q
    ||||||||||| || | |||||| |||||||||| || ||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  31581805 ggcggttctactgtatggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaa 31581706  T
Q  433 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  31581705 aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 31581619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 32127328 - 32127138
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||| ||| | ||||||||||||||||| |||||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  32127328 catgggcggttctagcgtatggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacattta 32127229  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | ||||| |||||    
T  32127228 caaaaagaaaaatttaggcaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcatgtctct 32127138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 329 - 486
Target Start/End: Complemental strand, 2958287 - 2958131
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2958287 catgggcggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacattta 2958189  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattt 486  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  2958188 caaagagaaaaatttgggtaatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 329 - 519
Target Start/End: Original strand, 16405580 - 16405770
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||| | | | ||||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  16405580 catgggcggttctaccatatggtgaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacattta 16405679  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||| |||||    
T  16405680 taaaaagaaaaatttggacaatctgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcatgtctct 16405770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 45418584 - 45418753
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  45418584 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 45418683  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  45418684 tctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctctct 45418753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 355 - 515
Target Start/End: Original strand, 771005 - 771165
Alignment:
Q  355 cccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctga 454  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  771005 cccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctga 771104  T
Q  455 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 515  Q
    ||||| ||||||| |||||||||| |||| ||||||||||||| ||||||| | |||||||    
T  771105 aaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 44084769 - 44084600
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||| || ||| |||||||  |||||||||| ||||||||||||||||||||||||    
T  44084769 gcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaaaagaaaaatttgggcaa 44084670  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||| ||| ||||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  44084669 tctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctctct 44084600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 368 - 519
Target Start/End: Complemental strand, 12756985 - 12756834
Alignment:
Q  368 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 467  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| |||||||    
T  12756985 ccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacg 12756886  T
Q  468 taaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     ||||| |||| |||||||||||||||||||||||||| | |||||||||||    
T  12756885 caaataagtctcggaattttatttagcacactattgacgggttcatctctct 12756834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 350 - 515
Target Start/End: Original strand, 8147352 - 8147518
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||||||||    
T  8147352 gcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 8147451  T
Q  450 tctg-aaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 515  Q
    |||| |||||| ||||||| |||||| ||| ||||||||||||| |||||||||||| | |||||||    
T  8147452 tctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 351 - 519
Target Start/End: Complemental strand, 8059498 - 8059330
Alignment:
Q  351 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaat 450  Q
    ||||||||| || ||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  8059498 cgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaagaaaaatttggccaat 8059399  T
Q  451 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     |||||||| ||||||  |||| ||||| ||||||||||||||||||| |||||| | ||||| |||||    
T  8059398 ttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcatttctct 8059330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 332 - 505
Target Start/End: Original strand, 2285845 - 2286018
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 431  Q
    ||||||||||||||  | |||| | ||| ||||| | | || |||||||||||||||||||||||| |  ||||| ||||| | |||||||||||||| |    
T  2285845 gggcggttctaccggatggcgatctcggacggtcattcaggttcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacga 2285944  T
Q  432 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 505  Q
    || |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  2285945 aaggaaaaatttgagcaatctgaaaattgtcacacgcaaataggttttggaattttatttagcacactattgac 2286018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 368 - 519
Target Start/End: Complemental strand, 26162847 - 26162699
Alignment:
Q  368 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 467  Q
    ||||||||  |||||||||||| ||||||| | ||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||| ||| ||     
T  26162847 ccgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaaca 26162748  T
Q  468 taaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     |||||||||| |||   |||||||||||| ||||||| | |||||||||||    
T  26162747 caaataggtctcgga---ttatttagcacattattgacgggttcatctctct 26162699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 457
Target Start/End: Original strand, 26237958 - 26238065
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc-a 448  Q
    ||||||||||||||||| |||||||||||||||| |||||||| ||||||  ||| ||||||| ||||||||||| |||||||||||||||||||||| |    
T  26237958 gcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttgggcaa 26238056  T
Q  449 atctgaaaa 457  Q
    |||||||||    
T  26238057 atctgaaaa 26238065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 373 - 475
Target Start/End: Complemental strand, 4555354 - 4555250
Alignment:
Q  373 ctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattgtcacacgtaa 470  Q
    ||||||||||||||||||||||| | || |||||||||||| | |||||||| |||||||||||||| |||||||  |||||||||||| ||||||||||    
T  4555354 ctcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggcaaaatctgaaaattctcacacgtaa 4555255  T
Q  471 atagg 475  Q
    |||||    
T  4555254 atagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 358 - 475
Target Start/End: Complemental strand, 7072710 - 7072589
Alignment:
Q  358 gggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaa--cacatttacaaaaagaaaaatttgggcaa--tctg 453  Q
    ||||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||||  |||| ||| ||||||||||  |||| |||  ||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctg 7072611  T
Q  454 aaaattgtcacacgtaaatagg 475  Q
    |||||| || ||||||||||||    
T  7072610 aaaattctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 424
Target Start/End: Original strand, 34905969 - 34906024
Alignment:
Q  369 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacaca 424  Q
    |||||||||||||||||||||||||||||  |  ||||||||||||||||||||||    
T  34905969 cgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacaca 34906024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 1e-94; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 328 - 515
Target Start/End: Complemental strand, 6269614 - 6269427
Alignment:
Q  328 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 427  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6269614 tcatgggcggttctaccgtgtagcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 6269515  T
Q  428 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6269514 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 6269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 22968631 - 22968441
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22968631 catgggcggttctaccgtgtagcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacattta 22968532  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22968531 caaaaagaaaaatttgggcaatctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatctctct 22968441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 325 - 519
Target Start/End: Original strand, 19390122 - 19390316
Alignment:
Q  325 tagtcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacaca 424  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  19390122 tagtcatgggaggttctaccgtgtggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacaca 19390221  T
Q  425 tttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19390222 tttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 19390316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 328 - 519
Target Start/End: Original strand, 39771769 - 39771960
Alignment:
Q  328 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 427  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39771769 tcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattt 39771868  T
Q  428 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  39771869 ataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 39771960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 333 - 519
Target Start/End: Complemental strand, 34084305 - 34084119
Alignment:
Q  333 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 432  Q
    |||||||||||||| | ||||||||||||||||| |||| ||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||    
T  34084305 ggcggttctaccgtatggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaa 34084206  T
Q  433 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  34084205 aagaaaaatttgggcaatatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctctct 34084119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 45182982 - 45183151
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  45182982 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 45183081  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||  |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  45183082 tctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctctct 45183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 11018399 - 11018209
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||  |||||   ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  11018399 catgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 11018300  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||||||||||| |||||| | |||||||||||    
T  11018299 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctctct 11018209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 6931060 - 6930891
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  6931060 gcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaaaaagaaaaatttaggcaa 6930961  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  6930960 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctctct 6930891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 353 - 519
Target Start/End: Original strand, 27935182 - 27935348
Alignment:
Q  353 accccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatct 452  Q
    |||| |||| |||| |||||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  27935182 accctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggcaatct 27935281  T
Q  453 gaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||| ||| ||| |||||||||| |||||||||||||||| ||||||||| | |||||||||||    
T  27935282 gaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctctct 27935348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 332 - 519
Target Start/End: Complemental strand, 40081922 - 40081738
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 431  Q
    ||||||||||||||| | ||||| | ||  ||||| ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  40081922 gggcggttctaccgtatggcgactctgga-ggtcgcccgggctcgatcgataatttttgaacattagactcaacc-aaaagctcattaacacatttacaa 40081825  T
Q  432 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||| |||||||||||||||| |||||| |||||| ||||| ||||||||||||||||| | |||||||||||    
T  40081824 aaagaaaaatttgggcaatttgaaaattgtcacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctctct 40081738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 33040954 - 33041123
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||||||||||||||  |||||||||| ||||||||||||| ||||||| ||||||||||||  ||||||||| |||||||||||||||||||  |||    
T  33040954 gcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgaacaa 33041053  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | |||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  33041054 tttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 33041123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 6503756 - 6503566
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||  |||||   ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||| |||| |||    
T  6503756 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactta 6503657  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||  |||||||||||||| ||||| | |||||||||| ||| ||||||||||||||| |||||  | |||||||||||    
T  6503656 caaaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctctct 6503566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 350 - 500
Target Start/End: Complemental strand, 19565667 - 19565517
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||| |||||||||||| ||||| || |||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||||||| |||    
T  19565667 gcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaaaagaaaaatttggacaa 19565568  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacacta 500  Q
    |||||||||| | ||||| |||||||||| |||||||||||||||||||||    
T  19565567 tctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 45335876 - 45336044
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||| |||||||||| |||| ||| ||||||||||||| |||||||||| ||||| ||||| | |||||||||||||||||||||||||| |||||||    
T  45335876 gcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtc-attaacacatttacaaaaagaaaaatctgggcaa 45335974  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| | ||||| |||||||||||||||||||||||||||||||| || | | |||||||||||    
T  45335975 tctgaaaattcttacacgcaaataggtcttggaattttatttagcacactagtgccggattcatctctct 45336044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 35514267 - 35514432
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||||||| |||||||||||||||||||||||||||| ||| | ||||  ||||||||||| |||||||||||    ||||||||||||||||| |||    
T  35514267 gcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacaca----caaaaagaaaaatttggacaa 35514362  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | |||||||| |||| || |||||||||| |||||||||||| ||||||||||||| | |||||||||||    
T  35514363 tatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctctct 35514432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 365 - 475
Target Start/End: Original strand, 5135285 - 5135397
Alignment:
Q  365 cgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattgtc 462  Q
    ||||| |||||||||||| ||||||| ||||||||| ||||| |||||| |||||||||| |||||||||||||||||||| |  |||| ||||||| ||    
T  5135285 cgtccaggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctc 5135384  T
Q  463 acacgtaaatagg 475  Q
    ||||  |||||||    
T  5135385 acacacaaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 22922141 - 22922214
Alignment:
Q  333 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacc 406  Q
    |||||||| ||||| | |||| ||||||||||||  |||||||||||||| |||||||||||||| ||||||||    
T  22922141 ggcggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaacc 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 519
Target Start/End: Original strand, 22922215 - 22922265
Alignment:
Q  469 aaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||| ||||||||||||||||| |||||||||||| | |||||||||||    
T  22922215 aaatagatcttggaattttatttaacacactattgacgggttcatctctct 22922265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 449
Target Start/End: Original strand, 5354710 - 5354809
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| ||||||||||||  |||||||  ||||||||   ||||| | | ||||||| ||||| ||  ||||| ||||| ||||||||    
T  5354710 gcgaccccgggcggtcgcccgggctcgatccttaattttctcacattaggtccaacctataggcccatttacacacttcaaaaaaaaaaaaattgggcaa 5354809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Original strand, 5135421 - 5135458
Alignment:
Q  482 aattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||| | |||||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctctct 5135458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 6890999 - 6891035
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatt 386  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  6890999 gcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 172; Significance: 3e-92; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 328 - 519
Target Start/End: Original strand, 20129289 - 20129480
Alignment:
Q  328 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 427  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20129289 tcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 20129388  T
Q  428 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  20129389 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatctctct 20129480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 328 - 519
Target Start/End: Complemental strand, 26439467 - 26439276
Alignment:
Q  328 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 427  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26439467 tcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattt 26439368  T
Q  428 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  26439367 ataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 26439276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 34407471 - 34407281
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34407471 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34407372  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  34407371 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 34407281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 329 - 519
Target Start/End: Original strand, 13012168 - 13012358
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  13012168 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacattta 13012267  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13012268 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 13012358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 329 - 519
Target Start/End: Original strand, 47500753 - 47500943
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  47500753 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 47500852  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
      |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47500853 tgaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 47500943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 328 - 519
Target Start/End: Original strand, 25930687 - 25930878
Alignment:
Q  328 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 427  Q
    ||||||||||||||||||| | ||||||| ||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  25930687 tcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacattt 25930786  T
Q  428 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  25930787 acaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 25930878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 329 - 519
Target Start/End: Original strand, 43355884 - 43356074
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||| ||||||| |||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43355884 catgggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 43355983  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  43355984 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 43356074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 29319892 - 29319702
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||| | | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29319892 catgggcggttctaccgtatggtgacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacattta 29319793  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| | ||||| |||||    
T  29319792 caaaaagaaaaatttgagcaatctgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcatgtctct 29319702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 333 - 519
Target Start/End: Complemental strand, 36382528 - 36382343
Alignment:
Q  333 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 432  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  36382528 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 36382429  T
Q  433 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  36382428 a-gaaaaatttggacaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 36382343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 351 - 519
Target Start/End: Complemental strand, 43143749 - 43143581
Alignment:
Q  351 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaat 450  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  43143749 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaat 43143650  T
Q  451 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||  | |||||||||||    
T  43143649 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctctct 43143581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 42333942 - 42333773
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  42333942 gcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 42333843  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||| |  |||||||||||    
T  42333842 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgataagttcatctctct 42333773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 352 - 519
Target Start/End: Complemental strand, 3293060 - 3292893
Alignment:
Q  352 gaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 451  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  3293060 gaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 3292961  T
Q  452 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  3292960 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctctct 3292893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 30216908 - 30216739
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  30216908 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggcaa 30216809  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||| | |||||| ||| |||||||||||||||||||||||||| | |||||||||||    
T  30216808 tctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctctct 30216739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 332 - 519
Target Start/End: Complemental strand, 17511417 - 17511230
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 431  Q
    ||||||||||||||| | ||||||| || |||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17511417 gggcggttctaccgtatggcgaccctgg-cggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 17511319  T
Q  432 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgg-aattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||||||||||||||| ||||||  | |||||||||||    
T  17511318 aaagaaaaatttgggcaatttgaaaattgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctctct 17511230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 332 - 519
Target Start/End: Original strand, 40528996 - 40529185
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcg--gtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttac 429  Q
    ||||||||||||||| | ||||||| |||||  ||||||||| ||||||||||||||||||||||||| |||||||| |||| | |||||||||||||||    
T  40528996 gggcggttctaccgtatggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttac 40529095  T
Q  430 aaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||| |||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  40529096 aaaaagaaaaatttggacaatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgacgggttcatatctct 40529185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 6690401 - 6690232
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  6690401 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 6690302  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     ||||||||| ||||||| |||||||||| | |||||||||||||||||||||||| | ||| |||||||    
T  6690301 actgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctctct 6690232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 50205243 - 50205074
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||||||| ||||||||| ||||||||||||||| |||| |||    
T  50205243 gcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaaaaagaaaaaattggacaa 50205144  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  50205143 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatcactct 50205074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 351 - 519
Target Start/End: Original strand, 48989330 - 48989498
Alignment:
Q  351 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaat 450  Q
    |||| ||||||||||  ||||| |||||||||||||||||||||||| || |||| |||||| ||||||||||| |||||||||||||||||||||||||    
T  48989330 cgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaaaaatttgggcaat 48989429  T
Q  451 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||| ||| ||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  48989430 ctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 48989498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 10353050 - 10352881
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||||| |||||||| |||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  10353050 gcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggcaa 10352951  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| | ||||| |||||||||| ||||||||||||||||||| | || | | |||||||||||    
T  10352950 tctgaaaattcttacacgcaaataggtctcggaattttatttagcacaccagtgtcggattcatctctct 10352881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 355 - 517
Target Start/End: Complemental strand, 29996144 - 29995982
Alignment:
Q  355 cccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctga 454  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  29996144 cccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaagaaaaatttgggcaatctga 29996045  T
Q  455 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctct 517  Q
    ||||| |  |||| |||||| ||| ||||||||||| |||||||||||||| | |||||||||    
T  29996044 aaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctct 29995982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 368 - 519
Target Start/End: Original strand, 44156670 - 44156821
Alignment:
Q  368 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 467  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||| || ||||    
T  44156670 ccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctcacg 44156769  T
Q  468 taaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  44156770 caaataggtctcggaattttatttagcacactattgacgggttcatctctct 44156821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 404 - 519
Target Start/End: Original strand, 6235575 - 6235690
Alignment:
Q  404 acccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattg 503  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6235575 acccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattg 6235674  T
Q  504 acagtttcatctctct 519  Q
    || | |||||||||||    
T  6235675 acgggttcatctctct 6235690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 30077798 - 30077628
Alignment:
Q  349 cgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 448  Q
    ||||||| |||||||||| || ||||| |||||||| ||||||||||||||| ||||| |||||  ||||||||||||||||||||||||||||||| ||    
T  30077798 cgcgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaaaagaaaaatttggaca 30077699  T
Q  449 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||| | ||||  |||||||||||| ||||||||||||||||||| || | | |||||||||||    
T  30077698 atctgaaaatttttacacacaaataggtcttgaaattttatttagcacactagtgccggattcatctctct 30077628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 352 - 519
Target Start/End: Complemental strand, 28877414 - 28877247
Alignment:
Q  352 gaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 451  Q
    ||||||| |||||||   ||||| |||||||||||||||||||||||| |||||| ||||||  ||||||||  ||| ||||||||||||||||| ||||    
T  28877414 gaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaaaagaaaaatttgggaaatc 28877315  T
Q  452 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | |||||| ||||||| |||||||||| |||||||||||||||||||||||||  | |||||||||||    
T  28877314 taaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctctct 28877247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 373 - 519
Target Start/End: Original strand, 35545977 - 35546123
Alignment:
Q  373 ctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaat 472  Q
    ||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  473 aggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     |||||  ||||||||||||||||||||||||  | |||||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctctct 35546123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 350 - 503
Target Start/End: Original strand, 26448054 - 26448206
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||| ||| ||| |||||||| ||||||||||||||||||||||||| |   |||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  26448054 gcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaaaa-aaaaatttgggcaa 26448152  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattg 503  Q
    |||||||||| ||| ||  |||||||| | ||||||||||||||||||||||||    
T  26448153 tctgaaaattctcatacacaaataggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 384 - 519
Target Start/End: Original strand, 1817752 - 1817887
Alignment:
Q  384 atttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaa 483  Q
    ||||||||||||||||  ||| ||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||| | ||||| |||||||||| ||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  484 ttttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||| |||||||||| | | |||||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctctct 1817887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 361 - 446
Target Start/End: Original strand, 48129978 - 48130063
Alignment:
Q  361 cggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttggg 446  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||| |||||||||||||||||||||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg 48130063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 351 - 475
Target Start/End: Original strand, 30109958 - 30110084
Alignment:
Q  351 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc--a 448  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||||||| ||| || |||| ||||||||||| |||||||||||||||||||| |  |    
T  30109958 cgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaaaaatttggacaaa 30110057  T
Q  449 atctgaaaattgtcacacgtaaatagg 475  Q
    || |||||| | ||||||| |||||||    
T  30110058 atatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 427 - 519
Target Start/End: Complemental strand, 13392970 - 13392878
Alignment:
Q  427 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||||| | |||||||||||||||||||||||  | |||||||||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgaatgattcatctctct 13392878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 427 - 519
Target Start/End: Complemental strand, 13396109 - 13396017
Alignment:
Q  427 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||||| | |||||||||||||||||||||||  | |||||||||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgaatgattcatctctct 13396017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 434
Target Start/End: Original strand, 27363344 - 27363446
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 431  Q
    |||||||| |||||| | |||||| |||||||||| ||||||||||||||   |||||||| ||||| | ||||||||||||||||||||||| ||||||    
T  27363344 gggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaa 27363443  T
Q  432 aaa 434  Q
    |||    
T  27363444 aaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 351 - 449
Target Start/End: Original strand, 45194178 - 45194276
Alignment:
Q  351 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||| |||| | | |||| ||||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||  ||||||||    
T  45194178 cgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 442
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  374 tcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatt 442  Q
    |||||||||||||||||||||||| || ||||||||||| | ||||||||| || |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

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Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 390
Target Start/End: Original strand, 7769308 - 7769369
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttg 390  Q
    |||||||||||  |||||   |||||||| |||||||| |||||||||||||||||||||||    
T  7769308 catgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

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Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 49908818 - 49908782
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatt 386  Q
    ||||||||||||||||| |||||||||||||||||||    
T  49908818 gcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Original strand, 30110108 - 30110145
Alignment:
Q  482 aattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||| | |||||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctctct 30110145  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Original strand, 48130111 - 48130148
Alignment:
Q  482 aattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||| | |||||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctctct 48130148  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 5517530 - 5517494
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatt 386  Q
    ||||||||||||||||| | |||||||||||||||||    
T  5517530 gcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

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Target: scaffold0069 (Bit Score: 171; Significance: 1e-91; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 329 - 519
Target Start/End: Original strand, 17822 - 18012
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17822 catgggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 17921  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17922 caaaaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctctct 18012  T

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Target: chr7 (Bit Score: 171; Significance: 1e-91; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 14777294 - 14777104
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14777294 catgggcggttctaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacattta 14777195  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14777194 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatcgctct 14777104  T

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Target: chr7; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 328 - 519
Target Start/End: Original strand, 5555466 - 5555657
Alignment:
Q  328 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 427  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5555466 tcatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcattt 5555565  T
Q  428 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  5555566 acaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 5555657  T

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Target: chr7; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 3114283 - 3114093
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||| | | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3114283 catgggcggttctaccgtatggtgaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 3114184  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  3114183 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 3114093  T

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Target: chr7; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 333 - 519
Target Start/End: Original strand, 8394109 - 8394295
Alignment:
Q  333 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 432  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  8394109 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 8394208  T
Q  433 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  8394209 aggaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctctct 8394295  T

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Target: chr7; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 333 - 519
Target Start/End: Original strand, 36630800 - 36630986
Alignment:
Q  333 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 432  Q
    |||||||||||||| | |||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  36630800 ggcggttctaccgtatggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 36630899  T
Q  433 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  36630900 aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctctct 36630986  T

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Target: chr7; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 37002310 - 37002141
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||| | ||||||||| ||||||||||||||||||||||||    
T  37002310 gcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 37002211  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  37002210 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 37002141  T

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Target: chr7; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 34389222 - 34389053
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  34389222 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggcaa 34389123  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||| ||| ||| | |||||||||||    
T  34389122 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctctct 34389053  T

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Target: chr7; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 8867897 - 8867728
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  8867897 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaagaaaaatttgggcaa 8867798  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    || ||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  8867797 tcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatcactct 8867728  T

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Target: chr7; HSP #9
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 358 - 519
Target Start/End: Original strand, 35090177 - 35090338
Alignment:
Q  358 gggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 457  Q
    ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  458 ttgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    || ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctctct 35090338  T

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Target: chr7; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 365 - 519
Target Start/End: Complemental strand, 40920154 - 40920000
Alignment:
Q  365 cgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcac 464  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  40920154 cgtccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcac 40920055  T
Q  465 acgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  40920054 atgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 40920000  T

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Target: chr7; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 353 - 519
Target Start/End: Original strand, 26624749 - 26624916
Alignment:
Q  353 accccgggcggtcgtccgggctcgat-cgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 451  Q
    |||||||||||||| | ||||||||| |||||||||||||| ||||||| ||| |||||||   ||||||||| ||||||||||||||||||||||||||    
T  26624749 accccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttacaaaaagaaaaatttgggcaatc 26624848  T
Q  452 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  26624849 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 26624916  T

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Target: chr7; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 356 - 519
Target Start/End: Complemental strand, 43184628 - 43184465
Alignment:
Q  356 ccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaa 455  Q
    |||||||||||  ||||||||||||||||||||| | ||| ||||| |||||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  43184628 ccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaa 43184529  T
Q  456 aattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  43184528 aattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctctct 43184465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 365 - 515
Target Start/End: Complemental strand, 38638387 - 38638237
Alignment:
Q  365 cgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcac 464  Q
    |||||| ||||||| ||||||||||||||||||||  ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  38638387 cgtccgagctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcac 38638288  T
Q  465 acgtaaataggtcttggaattttatttagcacactattgacagtttcatct 515  Q
    ||| |||||||||| |||||||||||||||||||||||||| | |||||||    
T  38638287 acgcaaataggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

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Target: chr7; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 350 - 505
Target Start/End: Original strand, 33685565 - 33685720
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||||| ||| ||||  ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33685565 gcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaaaagaaaaatttgggcaa 33685664  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 505  Q
    |||||||||| ||| ||| ||||| ||||   ||||||||||||||||||||||||    
T  33685665 tctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgac 33685720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 368 - 519
Target Start/End: Original strand, 36658200 - 36658351
Alignment:
Q  368 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 467  Q
    |||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||| | | ||||||| |||||||||||||||||||||||| |||||||    
T  36658200 ccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacacg 36658299  T
Q  468 taaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  36658300 caaataggtctcggaattttatttagcacactattgacgggttcatctctct 36658351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 7002726 - 7002895
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||| ||||||| ||||||||||||||  ||||||  |||||| || ||||||||||||| |||||||||  |||||||| |||||||||| |||    
T  7002726 gcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggacaa 7002825  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||| |||||| ||||||| |||||||||  |||||||||||||||||||||||||| | |||||||||||    
T  7002826 tctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctctct 7002895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 7048597 - 7048766
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||| ||||||| ||||||||||||||  ||||||  |||||| || ||||||||||||| |||||||||  |||||||| |||||||||| |||    
T  7048597 gcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggacaa 7048696  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||| |||||| ||||||| |||||||||  |||||||||||||||||||||||||| | |||||||||||    
T  7048697 tctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctctct 7048766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 166 - 308
Target Start/End: Original strand, 25151928 - 25152062
Alignment:
Q  166 acaatggcaactcaaggttacaatgatcactaaattaagcgatcttacctctatgaatgtagcaaacattatttgtggaatttcaagaacactagtttta 265  Q
    |||||||||||||||||||||||||||||||| |||            ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25151928 acaatggcaactcaaggttacaatgatcactatatt------------ctctatgaatgtagcaaacattatttgtggaatttcaagaacactagtttta 25152015  T
Q  266 gcagctctcagaactgc----atagagtgaagaagttaatatgaaca 308  Q
    |||||||||| ||||||    ||||||||||||||||||||||||||    
T  25152016 gcagctctcaaaactgcatatatagagtgaagaagttaatatgaaca 25152062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 25151802 - 25151931
Alignment:
Q  29 aaaatttgtacttttctactagtgattataataccaaatataaaat----------attttgaaacata-----ttttgtagacacctcattttaggatt 113  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||          |||||||||||||     |||| |||||||||||||||||||||    
T  25151802 aaaatttgtacttttctactagtgatta--ataccaaatataaaattaaaaatagaattttgaaacatagaatattttctagacacctcattttaggatt 25151899  T
Q  114 tttgttaactaacatttgaggagttgctacaa 145  Q
    |||||||||||||||| |||||||||||||||    
T  25151900 tttgttaactaacattggaggagttgctacaa 25151931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 10868583 - 10868514
Alignment:
Q  408 aaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattgtcacacgtaaatagg 475  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||    
T  10868583 aaaagcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 424
Target Start/End: Original strand, 26502797 - 26502885
Alignment:
Q  336 ggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacaca 424  Q
    ||||| ||||||| |||||||| ||| |||| ||||||||||||||   |||||||| ||||  | |||||||||||||||||||||||    
T  26502797 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26502885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 424
Target Start/End: Complemental strand, 26589917 - 26589829
Alignment:
Q  336 ggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacaca 424  Q
    ||||| ||||||| |||||||| ||| |||| ||||||||||||||   |||||||| ||||  | |||||||||||||||||||||||    
T  26589917 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26589829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 394
Target Start/End: Complemental strand, 10876861 - 10876829
Alignment:
Q  362 ggtcgtccgggctcgatcgataatttttgcaca 394  Q
    ||||| |||||||||||||||||||||||||||    
T  10876861 ggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 171; Significance: 1e-91; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 36293808 - 36293618
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36293808 catgggcggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacattta 36293709  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36293708 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatttacagtttcatctctct 36293618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 328 - 519
Target Start/End: Original strand, 39434675 - 39434866
Alignment:
Q  328 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 427  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39434675 tcatgggcggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacattt 39434774  T
Q  428 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39434775 acaaaatgaaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatctctct 39434866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 26283505 - 26283315
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||| ||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  26283505 catgggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 26283406  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26283405 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 26283315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 332 - 519
Target Start/End: Original strand, 10033910 - 10034097
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 431  Q
    ||||||||||||||| | |||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10033910 gggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 10034009  T
Q  432 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  10034010 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 10034097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 332 - 519
Target Start/End: Original strand, 13817960 - 13818147
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 431  Q
    ||||||||||||||| | |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13817960 gggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 13818059  T
Q  432 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |  ||||||||||    
T  13818060 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctctct 13818147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 39657693 - 39657503
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||  | | |||||||| | ||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39657693 catgggcggttctactatatggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacattta 39657594  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  39657593 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 39657503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 368 - 519
Target Start/End: Original strand, 16155016 - 16155167
Alignment:
Q  368 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  16155016 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacacg 16155115  T
Q  468 taaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16155116 caaataggtcttggaattttatttagcacactattgacagattcatctctct 16155167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 333 - 515
Target Start/End: Complemental strand, 1776559 - 1776377
Alignment:
Q  333 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 432  Q
    |||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||| |||||| | |||||| ||||| |||||||||||||||||||    
T  1776559 ggcggttctaccgtatgacgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaa 1776460  T
Q  433 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 515  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  1776459 aagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 12279026 - 12278857
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  12279026 gcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaaaagaaaaatttgggcaa 12278927  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  12278926 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctctct 12278857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 17332717 - 17332548
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  17332717 gcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 17332618  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  17332617 tctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctctct 17332548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 31680368 - 31680537
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  31680368 gcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 31680467  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||| | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  31680468 tctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 31680537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 379 - 519
Target Start/End: Complemental strand, 16334013 - 16333873
Alignment:
Q  379 cgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtct 478  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  479 tggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||||||| | ||||| |||||    
T  16333913 tggaattttatttagcacactattgacggattcatgtctct 16333873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 351 - 516
Target Start/End: Original strand, 19985941 - 19986106
Alignment:
Q  351 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaat 450  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||| |||    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaat 19986040  T
Q  451 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 516  Q
    || |||||| ||||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  19986041 ctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 37254642 - 37254811
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||||| |||||||| || |||||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  37254642 gcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 37254741  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||| ||||||| | |||||||||||    
T  37254742 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctctct 37254811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 363 - 519
Target Start/End: Original strand, 33430335 - 33430491
Alignment:
Q  363 gtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtc 462  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  463 acacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 33430491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 329 - 500
Target Start/End: Complemental strand, 3155818 - 3155647
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||| ||| | |||| ||||||||||||  ||||||||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  3155818 catgggcggttctatcgtatggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacattta 3155719  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacacta 500  Q
     |||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  3155718 taaaaagaaaaatttggacaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 350 - 504
Target Start/End: Complemental strand, 31501882 - 31501728
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||| | | ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  31501882 gcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 31501783  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 504  Q
    |||||||||| || |||| |||||||||| | |||||||||||||||||||||||    
T  31501782 tctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattga 31501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 366 - 519
Target Start/End: Original strand, 43068894 - 43069047
Alignment:
Q  366 gtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcaca 465  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  43068894 gtccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttaca 43068993  T
Q  466 cgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     ||||||| |||| |||||||||||||||||||||||| | | |||||||||||    
T  43068994 tgtaaataagtctcggaattttatttagcacactattgccggattcatctctct 43069047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 351 - 519
Target Start/End: Original strand, 36291373 - 36291541
Alignment:
Q  351 cgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaat 450  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||||   |||| |||||  ||||||||||||||||||||||||||||||||||||    
T  36291373 cgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaaaagaaaaatttgggcaat 36291472  T
Q  451 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    || |||||| | ||||  ||||||||||  |||||||||||| |||||||||||| | |||||||||||    
T  36291473 ctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctctct 36291541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 362 - 475
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  362 ggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttggg--caatctgaaaatt 459  Q
    ||||| || |||||||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||   ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  460 gtcacacgtaaatagg 475  Q
     ||||||| |||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 434
Target Start/End: Original strand, 202652 - 202724
Alignment:
Q  362 ggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaa 434  Q
    ||||| |||||||||||||||||||| || |||||||    |||||||||||||||||| ||| | |||||||    
T  202652 ggtcgcccgggctcgatcgataatttgtgtacattaggtcgaacccaaaagcccattaagacactaacaaaaa 202724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 385
Target Start/End: Original strand, 14316641 - 14316694
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataat 385  Q
    ||||||||||||||| | |||| | |||||||||| || |||||||||||||||    
T  14316641 gggcggttctaccgtatggcgatctcgggcggtcgcccaggctcgatcgataat 14316694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Original strand, 28801439 - 28801476
Alignment:
Q  482 aattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  28801439 aattttatttagctcactattgacaggttcatctctct 28801476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 159; Significance: 2e-84; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 480644 - 480454
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  480644 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 480545  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  480544 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 480454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 2e-84; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 329 - 519
Target Start/End: Original strand, 398597 - 398787
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  398597 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 398696  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  398697 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 34948945 - 34948755
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||| | |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34948945 catgggcggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34948846  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||| | ||||| |||||    
T  34948845 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcatgtctct 34948755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 328 - 519
Target Start/End: Original strand, 13837800 - 13837991
Alignment:
Q  328 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 427  Q
    ||||||||||||||||||| | ||||||||||||| |||  |||| ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  13837800 tcatgggcggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacattt 13837899  T
Q  428 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  13837900 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 13837991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 28996731 - 28996900
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||| ||||| | ||||||||| ||||||||||||||||||||||||    
T  28996731 gcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 28996830  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  28996831 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 28996900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 18339107 - 18339276
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | ||||||| ||||||||| |||||||||||||| |||||||||    
T  18339107 gcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggcaa 18339206  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||| | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  18339207 tctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 18339276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 355 - 519
Target Start/End: Original strand, 29743289 - 29743453
Alignment:
Q  355 cccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctga 454  Q
    |||||||||| | |||||||| |||||||||||||||||||||||| ||||| |||||  |||||||||||||||| |||||||||||||||||||||||    
T  29743289 cccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacagaaagaaaaatttgggcaatctga 29743388  T
Q  455 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||| | ||||| |||||||||| ||||||||||||||||||||| || | | |||||||||||    
T  29743389 aaattcttacacgcaaataggtctcggaattttatttagcacactagtgccggattcatctctct 29743453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 368 - 519
Target Start/End: Complemental strand, 33229484 - 33229333
Alignment:
Q  368 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 467  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| | |||||    
T  33229484 ccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttacacg 33229385  T
Q  468 taaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||| |||| || ||||||||||||||||||||| | | |||||||||||    
T  33229384 taaataagtctcgggattttatttagcacactattgccggattcatctctct 33229333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 31028530 - 31028435
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgg 445  Q
    ||||||||| ||||| | |||| |||||||||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||| ||| |||||    
T  31028530 gcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaaggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 24697983 - 24697899
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaa 434  Q
    |||||||||| |  ||| |||||||| ||||||||||||| |||||||| | ||||||||||||||||||||||| |||||||||    
T  24697983 gcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaaaa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 434
Target Start/End: Original strand, 24695515 - 24695572
Alignment:
Q  377 atcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaa 434  Q
    |||||| ||||||  ||||||| ||||||||||||||||||||||||| |||||||||    
T  24695515 atcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaaaaa 24695572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 385
Target Start/End: Original strand, 13647018 - 13647053
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataat 385  Q
    ||||||||||||||||| ||||||||||||||||||    
T  13647018 gcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 424
Target Start/End: Original strand, 24072576 - 24072623
Alignment:
Q  377 atcgataatttttgcacattagactcaacccaaaagcccattaacaca 424  Q
    |||||||||||||||||||||||   ||||||||| ||||||||||||    
T  24072576 atcgataatttttgcacattagatcgaacccaaaaacccattaacaca 24072623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 3050098 - 3050154
Alignment:
Q  368 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacaca 424  Q
    |||||||| ||| ||||||||||||||||   | ||||| |||||||||||||||||    
T  3050098 ccgggctcaatcaataatttttgcacattgagcgcaaccgaaaagcccattaacaca 3050154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 2e-84; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 329 - 519
Target Start/End: Original strand, 26144235 - 26144425
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  26144235 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 26144334  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26144335 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 26144425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 329 - 519
Target Start/End: Original strand, 7433425 - 7433615
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||||||||| | || |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7433425 catgggcggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacattta 7433524  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||| |||||||||||| |||||||||||||  |||||||||||| |||||||||||||||||||||||| | ||||| |||||    
T  7433525 caaaaagaaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcatgtctct 7433615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 336 - 519
Target Start/End: Complemental strand, 32982236 - 32982053
Alignment:
Q  336 ggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaag 435  Q
    ||||||||||| | |||||||||||||||||  ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  32982236 ggttctaccgtatggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaag 32982137  T
Q  436 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  32982136 aaaaatttggacaatctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatctctct 32982053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 332 - 519
Target Start/End: Complemental strand, 42311125 - 42310938
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 431  Q
    ||||||||||||||| | |||||||| | || ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42311125 gggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaa 42311026  T
Q  432 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| || |||||||| | |||||||||||    
T  42311025 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctctct 42310938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 357 - 519
Target Start/End: Complemental strand, 321536 - 321374
Alignment:
Q  357 cgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaa 456  Q
    ||||||||||||||||||||||||||||||||||  |||||||  ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  321536 cgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaagaaaaatttgggcaatctgaaa 321437  T
Q  457 attgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||| ||| | | |||||||||| ||||||||||||| |||| ||||||| | |||||||||||    
T  321436 attctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctctct 321374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 353 - 519
Target Start/End: Original strand, 3828988 - 3829153
Alignment:
Q  353 accccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatct 452  Q
    ||||||| ||||||  |||| |||||||||||||||||||||||| || |||||||||||  |||||||||| |||||||||||||||||||||||||||    
T  3828988 accccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatct 3829087  T
Q  453 gaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||| ||| ||| ||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  3829088 gaaaattttcatacgcaaataggtc-tggaattttatttagcacactattgacgggttcatctctct 3829153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 35907553 - 35907722
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| ||||  ||| |||||||||||||| |||||| ||    
T  35907553 gcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaaaaagaaaattttgggtaa 35907652  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||| |||||||   |||||||||||    
T  35907653 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctctct 35907722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 350 - 515
Target Start/End: Original strand, 17445314 - 17445479
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||  ||||||| ||||||| |||| |||||||||| ||||||||  ||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  17445314 gcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 17445413  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 515  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||| ||||||| | |||||||    
T  17445414 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 329 - 455
Target Start/End: Original strand, 23313218 - 23313345
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataattt-ttgcacattagactcaacccaaaagcccattaacacattt 427  Q
    |||||||||||||||||| | |||| | |||||||| | ||||||||||| ||| |||| ||||||||||||||||||  |||||  |||||||||||||    
T  23313218 catgggcggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacattt 23313317  T
Q  428 acaaaaagaaaaatttgggcaatctgaa 455  Q
    ||||||||||||||||||||||||||||    
T  23313318 acaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 475
Target Start/End: Complemental strand, 41972458 - 41972314
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 431  Q
    ||||||||| |||||   ||||||||||||||||| || |||||||||||||||||||||||||||||  ||||| ||||||| ||||||||| ||||||    
T  41972458 gggcggttccaccgtccagcgaccccgggcggtcg-cctggctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaa 41972360  T
Q  432 aaagaaaaatttgg--gcaatctgaaaattgtcacacgtaaatagg 475  Q
    ||||||||||||||    |||||||||||| ||||||| |||||||    
T  41972359 aaagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 475
Target Start/End: Original strand, 33489688 - 33489815
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc-- 447  Q
    |||||||||| ||||||| |||| | | ||||||||||||| ||||||||||||| | ||||||||||||||||| |||| |||||||||||||| ||      
T  33489688 gcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttactaaaagaaaaatttgagcaa 33489787  T
Q  448 aatctgaaaattgtcacacgtaaatagg 475  Q
    |||||||||||| ||||||| |||||||    
T  33489788 aatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 364 - 434
Target Start/End: Complemental strand, 35951497 - 35951427
Alignment:
Q  364 tcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaa 434  Q
    ||||||||||||||||||||||||||| |||||||    ||||||| |||||||||||||| | |||||||    
T  35951497 tcgtccgggctcgatcgataatttttgtacattaggtcgaacccaatagcccattaacacactaacaaaaa 35951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 48901253 - 48901203
Alignment:
Q  368 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccatt 418  Q
    ||||| |||||||||||||| |||||||||| | |||||||||||||||||    
T  48901253 ccggggtcgatcgataatttatgcacattaggcccaacccaaaagcccatt 48901203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Original strand, 33489839 - 33489876
Alignment:
Q  482 aattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||| | |||||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctctct 33489876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 155; Significance: 5e-82; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 329 - 519
Target Start/End: Original strand, 502 - 692
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||||||||| ||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  502 catgggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 601  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  602 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 2e-75; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 328 - 519
Target Start/End: Original strand, 39914494 - 39914684
Alignment:
Q  328 tcatgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 427  Q
    |||||| |||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  39914494 tcatggacggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattt 39914593  T
Q  428 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | ||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39914594 ataaaaa-aaaaatttgggcaatttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 39914684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 332 - 519
Target Start/End: Complemental strand, 29728570 - 29728383
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 431  Q
    ||||||||||||||| | |||||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  29728570 gggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaa 29728471  T
Q  432 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  29728470 aaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctctct 29728383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 353 - 519
Target Start/End: Complemental strand, 16788188 - 16788022
Alignment:
Q  353 accccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatct 452  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  16788188 accccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatct 16788089  T
Q  453 gaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
     |||| | ||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  16788088 taaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 16788022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 332 - 517
Target Start/End: Complemental strand, 3648978 - 3648793
Alignment:
Q  332 gggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 431  Q
    ||||||||||||||| | |||| || || | |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3648978 gggcggttctaccgtatggcgatccgggacagtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaa 3648879  T
Q  432 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctct 517  Q
    |||||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| | |||||||||    
T  3648878 aaagaaaattttgggcaatctgaaaattgtcacacgcaagtaggttttggaattttatttagcacactattgacgggttcatctct 3648793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 333 - 505
Target Start/End: Original strand, 15838270 - 15838441
Alignment:
Q  333 ggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaa 432  Q
    |||||||||||||| | ||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||| ||    
T  15838270 ggcggttctaccgtatggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttac-aa 15838368  T
Q  433 aagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 505  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  15838369 aagaaaaatttgggcaatctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgac 15838441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 329 - 519
Target Start/End: Complemental strand, 34137012 - 34136822
Alignment:
Q  329 catgggcggttctaccgtgtcgcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 428  Q
    |||||| ||||  ||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||    
T  34137012 catgggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacactta 34136913  T
Q  429 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||||||||| |||||  | |||||||||||    
T  34136912 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctctct 34136822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 4404009 - 4404178
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  4404009 gcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaa 4404108  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    ||| |||||| ||||||| |||||||||| ||||||||||||||||||| |||||  | |||||||||||    
T  4404109 tctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctctct 4404178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 23402109 - 23402278
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  23402109 gcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 23402208  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||||| |||||||||| | ||||||||||| |||||||||||| | |||||||||||    
T  23402209 tctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctctct 23402278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 36408552 - 36408721
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  36408552 gcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaagaaaatttttggcaa 36408651  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | |||||||| | |||||  |||||||||  |||||||||||| |||||||||| | | |||||||||||    
T  36408652 tttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctctct 36408721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 371 - 519
Target Start/End: Original strand, 9877242 - 9877390
Alignment:
Q  371 ggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaa 470  Q
    |||||||| |||||||||||||||||||||  |||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  471 ataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||| | |||||||||||||||||||||| ||  |||||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattgtcaaattcatctctct 9877390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 350 - 519
Target Start/End: Complemental strand, 2729362 - 2729193
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||| |  ||| ||||||||||||||||||| ||| |||||||||  ||| |||||    
T  2729362 gcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataaaaagaaattttttggcaa 2729263  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | |||||| | ||| ||| ||||||||||   |||||||||||||||||||||||  | |||||||||||    
T  2729262 tttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatctctct 2729193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 368 - 475
Target Start/End: Original strand, 3435288 - 3435397
Alignment:
Q  368 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattgtcaca 465  Q
    ||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||| ||| |    
T  3435288 ccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctcaaa 3435387  T
Q  466 cgtaaatagg 475  Q
    || |||||||    
T  3435388 cgcaaatagg 3435397  T

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Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 381 - 517
Target Start/End: Original strand, 42230971 - 42231105
Alignment:
Q  381 ataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttg 480  Q
    ||||||||||||||||| |  |||| |||||| ||||||||||  ||||||||||||||||||||||||| |||||||| ||| | | ||||||||||      
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  481 gaattttatttagcacactattgacagtttcatctct 517  Q
    ||||||||||||||||||||||||| | |||||||||    
T  42231069 gaattttatttagcacactattgacggattcatctct 42231105  T

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Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  372 gctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatt 442  Q
    ||||||||||||||||||||||||||||| |||  |||||| ||||||||||| ||| ||||| |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

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Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 10397206 - 10397122
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaa 434  Q
    ||||| ||||||  ||| |||||||| ||||||||||| | ||||||||  |||||||||||||| ||||||||| ||| |||||    
T  10397206 gcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagttaaaaaaa 10397122  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Complemental strand, 40470509 - 40470472
Alignment:
Q  482 aattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||||||||||||||||| | |||||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctctct 40470472  T

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Target: scaffold0041 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 365 - 519
Target Start/End: Original strand, 52941 - 53095
Alignment:
Q  365 cgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcac 464  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  52941 cgtccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcac 53040  T
Q  465 acgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    | | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  53041 atgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 53095  T

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Target: scaffold0502 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 5231 - 5400
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | ||||||| ||||||||| |||||||||||||| |||||||||    
T  5231 gcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggcaa 5330  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| ||||| | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  5331 tctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 5400  T

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Target: scaffold0154 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 31481 - 31650
Alignment:
Q  350 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 449  Q
    |||||||| | |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||    
T  31481 gcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaaaagaaaaatttggacaa 31580  T
Q  450 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 519  Q
    |||||||||| |||| || |||||||||| | |||||||||| ||||||||||||||| |||||||||||    
T  31581 tctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctctct 31650  T

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