View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11016_low_42 (Length: 208)
Name: NF11016_low_42
Description: NF11016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11016_low_42 |
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Alignment Details
Target: chr3 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 29064766 - 29064942
Alignment:
| Q |
13 |
gagatgaagattccttagtggataaatgatttctggtctagtaggctcttaaggttgtctttacatcaaaattaatttttgaatacatcttattgattac |
112 |
Q |
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| T |
29064766 |
gagatgaagattccttagtggataaatgatttctggtctagtacgctcttaaggttgtctttacatcaaaattaatttttgagtacatcttattgattac |
29064865 |
T |
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| Q |
113 |
aatatagcttatatttttctatttcaaaatgtaggagcaagatggattaacttgttccagtgttagccctgcagtag |
189 |
Q |
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| T |
29064866 |
aatatagcttatatttttctatttcaaaatgtaggagcaagatggattaacttgttccagtgttagccctgcagtag |
29064942 |
T |
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