View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11019_high_9 (Length: 220)

Name: NF11019_high_9
Description: NF11019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11019_high_9
NF11019_high_9
[»] scaffold0115 (1 HSPs)
scaffold0115 (20-205)||(36045-36230)
[»] chr3 (22 HSPs)
chr3 (105-197)||(22470401-22470493)
chr3 (105-190)||(19912593-19912678)
chr3 (112-197)||(22247003-22247087)
chr3 (105-197)||(18535776-18535868)
chr3 (106-197)||(20891645-20891736)
chr3 (104-171)||(2508717-2508784)
chr3 (121-188)||(34276452-34276519)
chr3 (105-190)||(3114708-3114793)
chr3 (118-175)||(12771214-12771271)
chr3 (118-179)||(52935545-52935606)
chr3 (118-190)||(12517303-12517375)
chr3 (118-193)||(819858-819933)
chr3 (107-190)||(3429225-3429308)
chr3 (118-196)||(7805749-7805827)
chr3 (112-154)||(25530737-25530779)
chr3 (122-190)||(8765687-8765755)
chr3 (122-190)||(8770577-8770645)
chr3 (115-190)||(12372341-12372416)
chr3 (116-180)||(19387869-19387933)
chr3 (105-159)||(16242193-16242247)
chr3 (106-158)||(26092950-26093002)
chr3 (118-166)||(31283915-31283963)
[»] chr2 (15 HSPs)
chr2 (106-190)||(17891744-17891828)
chr2 (118-197)||(35680112-35680191)
chr2 (118-194)||(23010055-23010131)
chr2 (118-197)||(17350984-17351063)
chr2 (105-190)||(21905739-21905824)
chr2 (121-197)||(28918194-28918270)
chr2 (107-165)||(29892228-29892286)
chr2 (121-166)||(27540280-27540325)
chr2 (105-165)||(16157083-16157143)
chr2 (118-190)||(22569067-22569139)
chr2 (120-188)||(27907536-27907604)
chr2 (140-197)||(28930280-28930337)
chr2 (105-166)||(32137911-32137972)
chr2 (118-190)||(25882582-25882654)
chr2 (118-166)||(25886203-25886251)
[»] chr7 (33 HSPs)
chr7 (105-197)||(23897246-23897338)
chr7 (106-197)||(10332410-10332501)
chr7 (106-197)||(6039297-6039388)
chr7 (118-190)||(14195761-14195833)
chr7 (118-197)||(9767791-9767870)
chr7 (113-190)||(8977477-8977554)
chr7 (104-197)||(26249073-26249166)
chr7 (118-190)||(11804711-11804783)
chr7 (113-196)||(5236873-5236956)
chr7 (118-197)||(10418563-10418642)
chr7 (118-197)||(23127906-23127985)
chr7 (104-197)||(23173683-23173776)
chr7 (118-186)||(3692772-3692840)
chr7 (118-190)||(4450684-4450756)
chr7 (118-190)||(8052441-8052512)
chr7 (118-190)||(18986756-18986828)
chr7 (118-190)||(19001384-19001456)
chr7 (118-197)||(3736342-3736421)
chr7 (106-197)||(7399334-7399424)
chr7 (118-188)||(3585534-3585604)
chr7 (105-166)||(1810941-1811002)
chr7 (106-175)||(13280787-13280856)
chr7 (118-179)||(21707349-21707410)
chr7 (118-154)||(2505892-2505928)
chr7 (106-190)||(39270273-39270356)
chr7 (118-197)||(144982-145060)
chr7 (118-165)||(2565944-2565991)
chr7 (106-175)||(9078881-9078951)
chr7 (111-164)||(9918206-9918259)
chr7 (111-164)||(9926118-9926171)
chr7 (105-154)||(17887729-17887778)
chr7 (118-166)||(18468351-18468399)
chr7 (121-165)||(20176131-20176175)
[»] chr6 (24 HSPs)
chr6 (118-197)||(22564561-22564640)
chr6 (105-197)||(21687128-21687220)
chr6 (106-196)||(14641639-14641729)
chr6 (115-197)||(23644326-23644408)
chr6 (105-188)||(22404253-22404336)
chr6 (118-197)||(22845863-22845942)
chr6 (105-197)||(6628973-6629065)
chr6 (118-190)||(14727147-14727219)
chr6 (106-196)||(9848170-9848260)
chr6 (106-196)||(9897868-9897957)
chr6 (104-174)||(14076425-14076495)
chr6 (120-197)||(8246619-8246695)
chr6 (136-197)||(9507300-9507361)
chr6 (105-154)||(10505195-10505244)
chr6 (108-165)||(27961252-27961309)
chr6 (118-190)||(9841032-9841104)
chr6 (118-197)||(1636640-1636718)
chr6 (118-197)||(19246282-19246361)
chr6 (118-175)||(21036958-21037015)
chr6 (140-197)||(21060438-21060495)
chr6 (118-175)||(24480052-24480109)
chr6 (112-156)||(9338984-9339028)
chr6 (120-156)||(21760421-21760457)
chr6 (118-190)||(24469811-24469883)
[»] chr5 (28 HSPs)
chr5 (106-197)||(34488863-34488954)
chr5 (105-197)||(26069255-26069347)
chr5 (118-197)||(17469570-17469649)
chr5 (104-197)||(19003763-19003856)
chr5 (118-190)||(23110208-23110280)
chr5 (105-197)||(26122388-26122480)
chr5 (118-190)||(28666505-28666577)
chr5 (118-197)||(25920837-25920916)
chr5 (112-166)||(15691305-15691359)
chr5 (105-190)||(34132099-34132184)
chr5 (119-190)||(23387560-23387631)
chr5 (121-159)||(28254935-28254973)
chr5 (121-190)||(24162026-24162095)
chr5 (118-190)||(18939533-18939605)
chr5 (106-197)||(19053107-19053198)
chr5 (118-197)||(20860345-20860424)
chr5 (119-190)||(31600088-31600159)
chr5 (118-196)||(24263762-24263840)
chr5 (121-175)||(25400753-25400807)
chr5 (105-175)||(29987985-29988055)
chr5 (103-164)||(19761578-19761639)
chr5 (105-154)||(20102892-20102941)
chr5 (122-167)||(25572494-25572539)
chr5 (106-158)||(17831739-17831790)
chr5 (118-190)||(22797432-22797504)
chr5 (106-166)||(26117474-26117534)
chr5 (118-154)||(29989014-29989050)
chr5 (106-154)||(32415830-32415878)
[»] chr1 (28 HSPs)
chr1 (118-197)||(24901215-24901294)
chr1 (106-175)||(15542308-15542377)
chr1 (118-195)||(26647369-26647446)
chr1 (116-196)||(16114807-16114887)
chr1 (115-175)||(27973331-27973391)
chr1 (105-190)||(21663089-21663174)
chr1 (118-190)||(729149-729221)
chr1 (105-197)||(33192358-33192450)
chr1 (118-197)||(15571700-15571779)
chr1 (118-197)||(16363629-16363708)
chr1 (104-165)||(14235282-14235343)
chr1 (118-190)||(12210278-12210350)
chr1 (117-197)||(21848632-21848712)
chr1 (105-197)||(22621800-22621891)
chr1 (112-190)||(13267855-13267933)
chr1 (118-167)||(11845233-11845282)
chr1 (112-197)||(28009752-28009837)
chr1 (112-156)||(7221563-7221607)
chr1 (118-190)||(18527508-18527580)
chr1 (106-158)||(20033118-20033170)
chr1 (106-154)||(27912113-27912161)
chr1 (105-148)||(15526805-15526848)
chr1 (106-153)||(24464664-24464711)
chr1 (105-175)||(14782558-14782628)
chr1 (121-190)||(15158803-15158872)
chr1 (118-154)||(21536918-21536954)
chr1 (118-190)||(22626166-22626238)
chr1 (118-194)||(25959471-25959547)
[»] scaffold0005 (1 HSPs)
scaffold0005 (104-197)||(243829-243921)
[»] chr8 (25 HSPs)
chr8 (112-197)||(24380359-24380444)
chr8 (118-190)||(22501846-22501918)
chr8 (106-197)||(13313271-13313362)
chr8 (115-190)||(30117667-30117742)
chr8 (106-172)||(19705017-19705083)
chr8 (105-197)||(4007150-4007242)
chr8 (121-197)||(7985123-7985199)
chr8 (118-190)||(20400347-20400419)
chr8 (106-165)||(21695413-21695472)
chr8 (105-197)||(5856785-5856876)
chr8 (118-190)||(14271854-14271926)
chr8 (118-190)||(17510917-17510989)
chr8 (106-197)||(25180721-25180812)
chr8 (118-161)||(13833615-13833658)
chr8 (104-158)||(17650006-17650060)
chr8 (118-196)||(17835550-17835628)
chr8 (118-195)||(2638728-2638804)
chr8 (118-175)||(18007564-18007620)
chr8 (120-197)||(24090892-24090969)
chr8 (125-190)||(24583190-24583255)
chr8 (118-151)||(28318558-28318591)
chr8 (97-166)||(28621641-28621710)
chr8 (118-158)||(5151964-5152004)
chr8 (105-197)||(12342890-12342981)
chr8 (118-190)||(18446871-18446943)
[»] chr4 (24 HSPs)
chr4 (104-197)||(14573455-14573547)
chr4 (113-197)||(7583798-7583882)
chr4 (118-197)||(9849719-9849798)
chr4 (103-197)||(18750830-18750924)
chr4 (107-175)||(8968072-8968140)
chr4 (118-190)||(15166481-15166553)
chr4 (106-190)||(17335355-17335439)
chr4 (118-177)||(25025132-25025191)
chr4 (115-197)||(9263359-9263441)
chr4 (118-198)||(9054010-9054090)
chr4 (118-190)||(11512038-11512110)
chr4 (106-197)||(17277851-17277942)
chr4 (118-196)||(12836082-12836160)
chr4 (105-154)||(8928312-8928361)
chr4 (118-197)||(10106301-10106380)
chr4 (118-197)||(17434440-17434519)
chr4 (118-197)||(22350252-22350331)
chr4 (119-197)||(20828152-20828230)
chr4 (118-175)||(11782520-11782577)
chr4 (121-190)||(17711319-17711388)
chr4 (121-177)||(15047793-15047849)
chr4 (121-177)||(15106575-15106631)
chr4 (118-154)||(19335237-19335273)
chr4 (118-150)||(19666961-19666993)
[»] scaffold0024 (1 HSPs)
scaffold0024 (125-197)||(41345-41417)
[»] scaffold0451 (1 HSPs)
scaffold0451 (118-197)||(10105-10184)
[»] scaffold0386 (1 HSPs)
scaffold0386 (118-197)||(4884-4963)
[»] scaffold0043 (1 HSPs)
scaffold0043 (106-197)||(88436-88527)
[»] scaffold0032 (1 HSPs)
scaffold0032 (103-190)||(92825-92912)
[»] scaffold0555 (1 HSPs)
scaffold0555 (105-190)||(6466-6551)
[»] scaffold0019 (1 HSPs)
scaffold0019 (112-167)||(35214-35269)
[»] scaffold0016 (1 HSPs)
scaffold0016 (119-190)||(4837-4908)
[»] scaffold0014 (1 HSPs)
scaffold0014 (103-175)||(192150-192222)


Alignment Details
Target: scaffold0115 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 20 - 205
Target Start/End: Original strand, 36045 - 36230
Alignment:
Q  20 atgttttccttgaaagtaatcaatgaaaaggaggaaataactatttttacctactgataactaaattagttttatacctaggaagttgatggcatgttat 119  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36045 atgttttccttgaaagtaatcaatgaagaggaggaaataactatttttacctactgataactaaattagttttatacctaggaagttgatggcatattat 36144  T
Q  120 cttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattggccttcat 205  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || |||||||||||||||||||||||||||    
T  36145 cttacgttattcttatcatgtttttcagtcattttcaataggttttatcagcaaagcatagtagtattagatcaattggccttcat 36230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 2e-26; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 22470401 - 22470493
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||    
T  22470401 ttgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgttttaccagcaaaacagaggagtgttagagcaattg 22470493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 19912678 - 19912593
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||| || || ||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||| |||| |||||||||    
T  19912678 ttgatgacaggtcatcttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaagaggagtattaga 19912593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 22247087 - 22247003
Alignment:
Q  112 catgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||| |||||||| |||| ||||||||| ||||||    
T  22247087 catgtcatcttacgttattcttagcat-tttttcagtcattttcagtaggttttaccagcaaaatagaggagtattagagcaattg 22247003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 18535868 - 18535776
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| || || ||||||||||||||||| ||| ||||||||||| ||| |||| |||||| ||||||| ||||| ||||||||||||||||    
T  18535868 ttgatgacaagtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaagcagaggagtattagatcaattg 18535776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 20891645 - 20891736
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||| || ||||||||||||||||| |||||||||||||| ||||||||| |||||| || ||||||| || | ||||| ||||||||    
T  20891645 tgatggcaggtcatcttacgttattcttagcatatttttcagtcgttttcagtaggttttaccaacaaaacataggaatattatatcaattg 20891736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 2508717 - 2508784
Alignment:
Q  104 gttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagc 171  Q
    ||||||||||||| |||||||||||||||||  || |||||||||||||||||||| |||||| ||||    
T  2508717 gttgatggcatgtcatcttacgttattcttagtatgtttttcagtcattttcagtaagttttaacagc 2508784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 34276452 - 34276519
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtatta 188  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||  ||| |||||||    
T  34276452 ttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaggaggagtatta 34276519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 3114708 - 3114793
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||| || || | |||||||||||| ||| |||||||||| ||| ||||| |||||| ||||||||||||| |||||||||    
T  3114708 ttgatggcaggtcatgtgacgttattcttagcatgtttttcagtcttttacagtaggttttaccagcaaaacagaggagtattaga 3114793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 12771214 - 12771271
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||    
T  12771214 atcttacgttattcttagcatgtttttcagtcattttcagtatattttagcagcaaaa 12771271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 52935545 - 52935606
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacaga 179  Q
    ||||||||||||||||| ||| ||||||| |||||||||||| |||||| ||||||||||||    
T  52935545 atcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccagcaaaacaga 52935606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 12517375 - 12517303
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||  |||||||  ||| |||||||||    
T  12517375 atcttacgttattcttagcatctttttcagtcattttcagtaggttttagtagcaaaaaggaggagtattaga 12517303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 819858 - 819933
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatca 193  Q
    ||||||||||||||||| ||| ||||||||||| |||||||| ||||||  |||| || |||| ||||||||||||    
T  819858 atcttacgttattcttagcatgtttttcagtcaatttcagtaggttttacaagcataatagaggagtattagatca 819933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 3429225 - 3429308
Alignment:
Q  107 gatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||| ||||| ||||||||||||||||||||| ||||||| ||  ||| |||| |||||| ||||||| ||||| |||||||||    
T  3429225 gatgacatgtcatcttacgttattcttatcatgtttttcattctattttagtaggttttaccagcaaaccagaggagtattaga 3429308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 7805827 - 7805749
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaatt 196  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||    ||||| |||| ||||||||| |||||    
T  7805827 atcttacgttattcttagcatgtttttcaatcattttcagtatgttttacatccaaaatagaggagtattagagcaatt 7805749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 25530737 - 25530779
Alignment:
Q  112 catgttatcttacgttattcttatcatatttttcagtcatttt 154  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  25530737 catgttatcttacgttattcttagcatatttttcagtcatttt 25530779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 8765755 - 8765687
Alignment:
Q  122 tacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||| ||| ||||||||||||||||| || |||||| | |||||| |||| |||||||||    
T  8765755 tacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattaga 8765687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 8770645 - 8770577
Alignment:
Q  122 tacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||| ||| ||||||||||||||||| || |||||| | |||||| |||| |||||||||    
T  8770645 tacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattaga 8770577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 12372341 - 12372416
Alignment:
Q  115 gttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||||||||| ||||||| ||| ||||||| |||||||||||| ||||||  |||||||  ||| |||||||||    
T  12372341 gttatcttacgtaattcttagcatttttttcaatcattttcagtaggttttacgagcaaaaaggaggagtattaga 12372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 19387869 - 19387933
Alignment:
Q  116 ttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagag 180  Q
    |||||||| |||||| ||| | | |||||||||||||||||||| |||||| |||||||| ||||    
T  19387869 ttatcttatgttatttttagcttgtttttcagtcattttcagtaggttttaccagcaaaatagag 19387933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 16242193 - 16242247
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagta 159  Q
    |||||| || || ||||||||||||||||| ||||||||||| ||||||| ||||    
T  16242193 ttgatgacaggtcatcttacgttattcttagcatatttttcactcatttttagta 16242247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 26093002 - 26092950
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagt 158  Q
    ||||| ||||| ||||||| ||||||||| ||||||||||| | |||||||||    
T  26093002 tgatgacatgtcatcttacattattcttagcatatttttcaattattttcagt 26092950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 31283915 - 31283963
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgtttta 166  Q
    |||| |||||||||||||||| ||||||| ||||||| |||| ||||||    
T  31283915 atctaacgttattcttatcatgtttttcaatcattttaagtaggtttta 31283963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 17891828 - 17891744
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  17891828 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttaccagcaaaacagaggagtattaga 17891744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 35680112 - 35680191
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||||||| ||| ||||| |||||||||||||| |||||| ||||||||||||| ||||||||| ||||||    
T  35680112 atcttacgttattcttagcatgtttttaagtcattttcagtaggttttaccagcaaaacagaggagtattagagcaattg 35680191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 23010055 - 23010131
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaa 194  Q
    ||||||||||||||||| ||| ||||||||||||||||| || |||||| |||||||||  || |||||||||||||    
T  23010055 atcttacgttattcttagcatgtttttcagtcattttcaataggttttaccagcaaaacgaaggagtattagatcaa 23010131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 17351063 - 17350984
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||||||| ||||||||||||| |||||||||| |||||| || |||||  ||| ||||||||| ||||||    
T  17351063 atcttacgttattcttaacatatttttcagttattttcagtaggttttagcaacaaaaatgaggagtattagaacaattg 17350984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 21905824 - 21905739
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||| || || |||||| |||||||||| ||| |||||||||||||||| |||||||||| ||| ||||  ||| |||||||||    
T  21905824 ttgatgacaggtcatcttatgttattcttagcatgtttttcagtcattttctgtatgttttagcaggaaaaaggaggagtattaga 21905739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 28918270 - 28918194
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||| |  |||||  ||| ||||||||| ||||||    
T  28918270 ttacgttattcttagcatgtttttcagtcattttcagtaggttttagctacaaaaaggaggagtattagaacaattg 28918194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 29892286 - 29892228
Alignment:
Q  107 gatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgtttt 165  Q
    |||| ||||| ||||||||||||||||| ||||||||||||| ||||||| || |||||    
T  29892286 gatgacatgtcatcttacgttattcttaacatatttttcagttattttcaataggtttt 29892228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 27540280 - 27540325
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagtatgtttta 166  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||    
T  27540280 ttacgttactcttagcatatttttcagtcattttcagtaggtttta 27540325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 16157083 - 16157143
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgtttt 165  Q
    |||||| || || ||||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  16157083 ttgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggtttt 16157143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 22569139 - 22569067
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||| |||||||||| ||| ||||||||||| |||||||| |||||| ||| ||||  ||| |||||||||    
T  22569139 atcttatgttattcttaccatgtttttcagtcaatttcagtaggttttagcagaaaaaatgagaagtattaga 22569067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 27907536 - 27907604
Alignment:
Q  120 cttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtatta 188  Q
    ||||| ||||||||| ||| |||||||||||||||||||| |||||| || |||||  ||| |||||||    
T  27907536 cttacattattcttagcatgtttttcagtcattttcagtaagttttagcaacaaaaaggagaagtatta 27907604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 28930337 - 28930280
Alignment:
Q  140 tttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||||||||||||||||| | ||||||  ||| | ||||||| ||||||    
T  28930337 tttttcagtcattttcagtatgttttagctgcaaaaatgaggaatattagaacaattg 28930280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 32137911 - 32137972
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgtttta 166  Q
    |||||| || || |||||||||||||||||| || ||| ||||||||||| |||| ||||||    
T  32137911 ttgatgacaggtcatcttacgttattcttattatgtttatcagtcatttttagtaggtttta 32137972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 25882582 - 25882654
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||| ||| ||| ||||||||||| ||| |||| |||||  |||||||||| |  |||||||||    
T  25882582 atcttacgttatttttagcatgtttttcagtcaattttagtaggttttgccagcaaaacaaataagtattaga 25882654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 25886203 - 25886251
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgtttta 166  Q
    ||||||||||||| ||||||| |||||| |||||||||| || ||||||    
T  25886203 atcttacgttatttttatcatgtttttctgtcattttcattaggtttta 25886251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 23897338 - 23897246
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| ||||| ||||||| ||||||||| ||| ||||||||||| ||| ||||||||||| ||||||||||||| ||||||| ||||||||    
T  23897338 ttgatgacatgtcatcttacattattcttaacatgtttttcagtcaattttagtatgttttaccagcaaaacagaggagtattatatcaattg 23897246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 10332501 - 10332410
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||  || | || |||| ||||||||||||||||    
T  10332501 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgttttacaagtagaaaagaggagtattagatcaattg 10332410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 6039297 - 6039388
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| ||||| ||||||| ||||||||| ||| ||||||||||||||||||||  ||||| ||||| ||||||||| ||||||| ||||||    
T  6039297 tgatgtcatgtcatcttacattattcttaacatgtttttcagtcattttcagtagattttaccagcataacagagtaatattagagcaattg 6039388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 14195833 - 14195761
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||| |||||||||| ||| ||||||||||||||| |||| |||||| ||||||||||||| |||||||||    
T  14195833 atcttatgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacagaggagtattaga 14195761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 9767870 - 9767791
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||| |||||||||||| ||| |||||||| ||||||||||| |||||| ||| |||| |||| ||||||||||||||||    
T  9767870 atctcacgttattcttagcatgtttttcagccattttcagtaggttttaccagaaaaatagaggagtattagatcaattg 9767791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 8977477 - 8977554
Alignment:
Q  113 atgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||| ||||||||||||||||| ||| ||||||| |||||||||||| |||||| ||||||||  ||| |||||||||    
T  8977477 atgtcatcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattaga 8977554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 26249073 - 26249166
Alignment:
Q  104 gttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||| || || |||||||||||||| || ||| |||||||||||||||||||| |||||| ||||||||  ||  ||||||||| ||||||    
T  26249073 gttgatgacaggtcatcttacgttattcatagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggatgagtattagaacaattg 26249166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 11804783 - 11804711
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||||||||||| || ||| |||||||||||||||||||| |||||| ||||||||  ||| |||||||||    
T  11804783 atcttacgttattcataacatgtttttcagtcattttcagtaggttttagcagcaaaaaggagcagtattaga 11804711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 5236873 - 5236956
Alignment:
Q  113 atgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaatt 196  Q
    |||| ||||||||||||||||| ||| ||||||||| |||||||||| |||||| ||||||||  ||| || |||||| |||||    
T  5236873 atgtcatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggaggattagaacaatt 5236956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 10418642 - 10418563
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| ||||| ||||| ||| ||||| |||||||||||||| ||||||  |||||||||||| ||||||||| ||||||    
T  10418642 atcttccgttactcttaacatgttttttagtcattttcagtaggttttactagcaaaacagaggagtattagagcaattg 10418563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 23127906 - 23127985
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||| ||| ||||| ||||||||  ||| |||| |||||| ||||||| ||||| ||||||||||||||||    
T  23127906 atcttacgttatttttagcatatatttcagtctattttagtaggttttaccagcaaagcagaggagtattagatcaattg 23127985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 23173683 - 23173776
Alignment:
Q  104 gttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||| ||||| ||||||||||||||||| ||| ||||||||| ||||| | || |||||| | ||||||  ||| ||||||||| ||||||    
T  23173683 gttgatgacatgtcatcttacgttattcttagcatgtttttcagttatttttaataggttttagctgcaaaaaggaggagtattagaacaattg 23173776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 3692772 - 3692840
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtat 186  Q
    |||||||||||||| || ||||||||||| |||||||| ||| |||||| ||||||||| ||| |||||    
T  3692772 atcttacgttattcatagcatatttttcattcattttctgtaggttttaccagcaaaaccgagaagtat 3692840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 4450756 - 4450684
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| ||| |||| ||||||||||||||| |||||| || |||||  ||| |||||||||    
T  4450756 atcttacgttattcttagcatgttttccagtcattttcagtaggttttagcaacaaaatggaggagtattaga 4450684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 8052441 - 8052512
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| ||| |||| ||||||||||||||| |||||| ||||||||  ||| |||||||||    
T  8052441 atcttacgttattcttagcatgtttt-cagtcattttcagtaggttttagcagcaaaaatgaggagtattaga 8052512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 18986756 - 18986828
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||  ||||| ||||||||  ||| |||||||||    
T  18986756 atcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattaga 18986828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 19001384 - 19001456
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||  ||||| ||||||||  ||| |||||||||    
T  19001384 atcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattaga 19001456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 3736421 - 3736342
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||||||| ||| ||||| ||||  |||||||| |||||| ||||||| || || | ||||||||||||||    
T  3736421 atcttacgttattcttagcatgttttttagtctatttcagtaggttttaccagcaaagcataggattattagatcaattg 3736342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 7399424 - 7399334
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| ||||| ||||||||||||||||| ||| |||| ||||| |||| |||| | ||||  |||||||||||  ||||||||||||||||    
T  7399424 tgatgacatgtcatcttacgttattcttaacatgtttt-cagtcgtttttagtagggtttactagcaaaacagaagagtattagatcaattg 7399334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 3585534 - 3585604
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtatta 188  Q
    ||||||| ||||||||| ||| ||||||| |||||||||||| |||||| ||||||||  ||| |||||||    
T  3585534 atcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 3585604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 1811002 - 1810941
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgtttta 166  Q
    |||||| ||||| |||||||||||||| || ||| ||||||||||||||| |||| ||||||    
T  1811002 ttgatgacatgtcatcttacgttattcgtagcatgtttttcagtcattttaagtaagtttta 1810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 13280856 - 13280787
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    ||||| ||||| ||||||||||||||||| ||| ||||||| | | |||||||| |||||| ||||||||    
T  13280856 tgatgacatgtcatcttacgttattcttagcatgtttttcaattaatttcagtaggttttagcagcaaaa 13280787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 21707349 - 21707410
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacaga 179  Q
    ||||||||||||||||| ||||||||||| ||||||| |||| |||||| ||| | ||||||    
T  21707349 atcttacgttattcttagcatatttttcaatcatttttagtaggttttaccagtataacaga 21707410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 2505928 - 2505892
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcatttt 154  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2505928 atcttacgttattcttagcatatttttcagtcatttt 2505892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 39270273 - 39270356
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||| ||||| |||||||||||| |||| ||| ||||||||||||||| |||| |||||| ||| ||||  ||| |||||||||    
T  39270273 tgatgacatgtcatcttacgttat-cttagcatgtttttcagtcatttttagtaagttttagcagtaaaaaggaggagtattaga 39270356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 145060 - 144982
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| |||||||||| ||| |||| |||||||||| |||| |||||| ||||||||| ||  ||||||||| ||||||    
T  145060 atcttatgttattcttaacatgtttt-cagtcatttttagtaggttttaccagcaaaacggatgagtattagagcaattg 144982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 2565991 - 2565944
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgtttt 165  Q
    |||||||| |||||||| ||| |||||||||||||||||||| |||||    
T  2565991 atcttacgatattcttagcatgtttttcagtcattttcagtaggtttt 2565944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 9078881 - 9078951
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcat-atttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    ||||| ||||| ||||||||||||||||| |||  ||||||||| |||||||||| |||| | ||||||||    
T  9078881 tgatgacatgtcatcttacgttattcttagcatgttttttcagttattttcagtaggtttcagcagcaaaa 9078951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 9918259 - 9918206
Alignment:
Q  111 gcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttt 164  Q
    |||||| ||||||||||||||||  ||| ||||| |||||||||||||| ||||    
T  9918259 gcatgtcatcttacgttattcttgacatgtttttgagtcattttcagtaagttt 9918206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 9926171 - 9926118
Alignment:
Q  111 gcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttt 164  Q
    |||||| ||||||||||||||||  ||| ||||| |||||||||||||| ||||    
T  9926171 gcatgtcatcttacgttattcttgacatgtttttgagtcattttcagtaagttt 9926118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 17887729 - 17887778
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcatttt 154  Q
    |||||| || || ||| ||||||||||||| |||||||||||||||||||    
T  17887729 ttgatgacaggtcatcctacgttattcttagcatatttttcagtcatttt 17887778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 18468351 - 18468399
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgtttta 166  Q
    ||||||||||||||||| ||| ||||||||||| ||| |||| ||||||    
T  18468351 atcttacgttattcttaacatgtttttcagtcaattttagtaagtttta 18468399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 20176175 - 20176131
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagtatgtttt 165  Q
    |||| ||||||||| ||| |||| |||||||||||||||||||||    
T  20176175 ttacattattcttagcatgttttccagtcattttcagtatgtttt 20176131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 22564561 - 22564640
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| |||||| ||||||||||||| ||||||||| ||||||    
T  22564561 atcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacagaggagtattagagcaattg 22564640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 21687128 - 21687220
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| ||||| ||||||||||||||||| ||| ||||||||||| ||| |||| |||||| ||||||||||||  |||| |||||||||||    
T  21687128 ttgatgacatgtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaaacagaagagtaatagatcaattg 21687220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 14641729 - 14641639
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaatt 196  Q
    ||||| || |||||||||||||||||||| ||| ||||||||| |||||||||| |||||| ||||||||  ||| ||||||||| |||||    
T  14641729 tgatgacaggttatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggagtattagaacaatt 14641639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 23644326 - 23644408
Alignment:
Q  115 gttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||||||||||||||| ||| ||||||| |  |||| |||| |||||| |||||||||| || ||||||||||||||||    
T  23644326 gttatcttacgttattcttagcatgtttttcaattgtttttagtaggttttaccagcaaaacataggagtattagatcaattg 23644408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 22404253 - 22404336
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtatta 188  Q
    |||||| ||||| ||||| ||||||||||||||| ||||||||| | |||||||| |||||| ||||||||  ||| |||||||    
T  22404253 ttgatgacatgtcatctttcgttattcttatcatgtttttcagtaaatttcagtaggttttagcagcaaaaaggaggagtatta 22404336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 22845863 - 22845942
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||| ||||| ||| ||||||||| ||||||||||||||||| || |||||  ||| ||||||||| ||||||    
T  22845863 atcttacgttactcttagcatgtttttcagttattttcagtatgttttaacaacaaaaaggaggagtattagaacaattg 22845942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 6628973 - 6629065
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| ||| | ||||||||||||||||| ||| | ||| || |  ||| |||| |||||| ||||||| ||||||||||||||||||||||    
T  6628973 ttgatgccatatcatcttacgttattcttagcatgtcttttagactattttagtaggttttaccagcaaaccagagtagtattagatcaattg 6629065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 14727219 - 14727147
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||| ||| ||| ||||||||||||||| |||| |||||||| ||| |||| || |||||||||    
T  14727219 atcttacgttattattaccatgtttttcagtcatttttagtaggttttatctgcagaacataggagtattaga 14727147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 9848260 - 9848170
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaatt 196  Q
    ||||| ||||| || | |||||||||||| ||| ||||||||||||||| |||| ||||||| |||||||  ||  ||||||||| |||||    
T  9848260 tgatgacatgtcatttgacgttattcttaacatgtttttcagtcatttttagtaggttttattagcaaaaaggatgagtattagagcaatt 9848170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 196
Target Start/End: Original strand, 9897868 - 9897957
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaatt 196  Q
    ||||| ||||| |||||||||  |||||| |||  |||| |||||||||||||| |||||| || |||||||||| ||| |||||||||||    
T  9897868 tgatgacatgtcatcttacgtcgttcttagcatgatttttagtcattttcagta-gttttaccaacaaaacagaggagtgttagatcaatt 9897957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 14076495 - 14076425
Alignment:
Q  104 gttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaa 174  Q
    ||||||| || || ||||||||||||||||| |||  |||||||| |||||||||||| |||| |||||||    
T  14076495 gttgatgacaggtcatcttacgttattcttagcatggttttcagttattttcagtatgatttagcagcaaa 14076425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 8246695 - 8246619
Alignment:
Q  120 cttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||| |||||||||| ||| ||||||||||||||| |||| |||||| ||  |||||| || ||||||||||||||||    
T  8246695 cttatgttattcttagcat-tttttcagtcatttttagtaggttttaccataaaaacataggagtattagatcaattg 8246619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 9507300 - 9507361
Alignment:
Q  136 catatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||||||||||||||||||| |||||| ||| | ||||| | ||||||||| ||||||    
T  9507300 catatttttcagtcattttcagtaggttttaccagtagaacaggggagtattagaacaattg 9507361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 10505244 - 10505195
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcatttt 154  Q
    |||||| || ||||||||||||||| |||| |||||||||||||||||||    
T  10505244 ttgatgacaagttatcttacgttatacttagcatatttttcagtcatttt 10505195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 27961309 - 27961252
Alignment:
Q  108 atggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgtttt 165  Q
    |||| |||| ||||||||||||||||| ||| ||||||| |||||||||||| |||||    
T  27961309 atggtatgtcatcttacgttattcttaacatgtttttcaatcattttcagtaggtttt 27961252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 9841104 - 9841032
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| ||| | ||| |||||||||||||| |||||| ||||| ||  ||| |||||||||    
T  9841104 atcttacgttattcttaacatgtgttttagtcattttcagtaggttttaccagcagaaaggaggagtattaga 9841032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 1636718 - 1636640
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||||||| ||| ||||||||| ||||| |||| |||||| | ||||||  ||| ||||||||| ||||||    
T  1636718 atcttacgttattcttagcatgtttttcagttatttttagtaggttttagcggcaaaaaggag-agtattagaacaattg 1636640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 19246361 - 19246282
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||| |||||||||| | ||| ||||||||||  ||| |||| |||||| |||||||| |||  ||||||||||||||||    
T  19246361 atctaacgttattctaagcatgtttttcagtctattttagtaggttttaacagcaaaatagatgagtattagatcaattg 19246282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 21037015 - 21036958
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    ||||||||| ||||||||||| ||||||||| ||||| |||| |||||| || |||||    
T  21037015 atcttacgtcattcttatcatgtttttcagttatttttagtaggttttagcaacaaaa 21036958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 21060438 - 21060495
Alignment:
Q  140 tttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||||||| || ||||||  | ||||| |||| ||||||||||||||||    
T  21060438 tttttcagtcattttcaataggttttaaaaccaaaatagaggagtattagatcaattg 21060495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 24480109 - 24480052
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    ||||||||||||||||| ||| | ||||| |||||||||||| |||||  ||||||||    
T  24480109 atcttacgttattcttagcatgtatttcaatcattttcagtaggttttggcagcaaaa 24480052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 9338984 - 9339028
Alignment:
Q  112 catgttatcttacgttattcttatcatatttttcagtcattttca 156  Q
    ||||| ||||||||| ||||||| ||| |||||||||||||||||    
T  9338984 catgtcatcttacgtcattcttaacatgtttttcagtcattttca 9339028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 21760421 - 21760457
Alignment:
Q  120 cttacgttattcttatcatatttttcagtcattttca 156  Q
    |||| |||||||||| |||||||||||||||||||||    
T  21760421 cttaagttattcttagcatatttttcagtcattttca 21760457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 24469883 - 24469811
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||| |||  || ||||||| |||||||||||| |||||  ||||||||  ||| |||||||||    
T  24469883 atcttacgttatttttagtatgtttttcaatcattttcagtaggttttgacagcaaaaaggaggagtattaga 24469811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 34488954 - 34488863
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||| || ||||||||||||||||| ||| ||||||||||||||| |||| | |||| ||||||||||||  ||||||||||||||||    
T  34488954 tgatggcaggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggatttaccagcaaaacagatgagtattagatcaattg 34488863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 26069347 - 26069255
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| || |||||||||||||||||||| ||| ||||| ||||||||||||||  ||||| ||||| ||||||| ||||||||| ||||||    
T  26069347 ttgatgacaagttatcttacgttattcttaacatgttttttagtcattttcagtagattttaccagcagaacagaggagtattagaacaattg 26069255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 17469570 - 17469649
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||||||| ||| ||||||| |||||||||| | |||||| ||||||||||||| ||||||||| ||||||    
T  17469570 atcttacgttattcttagcatgtttttcaatcattttcagcaggttttaccagcaaaacagaggagtattagagcaattg 17469649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 19003763 - 19003856
Alignment:
Q  104 gttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||| ||||| ||||||||||||||||  ||| ||||||||| |||||||||| |||||| ||||||||  ||  ||||||||| ||||||    
T  19003763 gttgatgacatgtgatcttacgttattcttggcatgtttttcagttattttcagtaggttttagcagcaaaaaggatgagtattagaacaattg 19003856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 23110208 - 23110280
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| ||| ||||| ||||||| || ||| |||||| ||||||||||||| |||||||||    
T  23110208 atcttacgttattcttaacatgttttttagtcattatcggtaggttttaacagcaaaacagaggagtattaga 23110280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 26122480 - 26122388
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| || |||||||||  ||||||||| ||| ||||| |||| |||| |||| |||||| ||||||||||||| ||||||||| ||||||    
T  26122480 ttgatgacaggttatcttaaattattcttagcatgttttttagtcgtttttagtaggttttaccagcaaaacagaggagtattagagcaattg 26122388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 28666577 - 28666505
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||| |||||||||||||| ||||||| |||||||||||| |||||| ||||||||  ||| |||||||||    
T  28666577 atcttatgttattcttatcatgtttttcattcattttcagtaggttttagcagcaaaaaggagaagtattaga 28666505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 25920916 - 25920837
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||||||| |||||||||  ||||||||||||| | |||| ||||||||| ||  ||||||||| ||||||    
T  25920916 atcttacgttattcttagcatatttttttgtcattttcagtaggatttaccagcaaaacggatgagtattagagcaattg 25920837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 15691359 - 15691305
Alignment:
Q  112 catgttatcttacgttattcttatcatatttttcagtcattttcagtatgtttta 166  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  15691359 catgtcatcttacgttattcttagcatattttttagtcattttcagtaggtttta 15691305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 34132184 - 34132099
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||||||||| ||||||| ||||||||| ||| ||||||||  ||||||| || |||||| ||||||||  ||| |||||||||    
T  34132184 ttgatggcatgtcatcttactttattcttagcatgtttttcagctattttcattaggttttagcagcaaaaaggagaagtattaga 34132099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 23387560 - 23387631
Alignment:
Q  119 tcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||| ||||||| || ||| |||||||||||||||||||| |||||| ||||||||  ||| |||||||||    
T  23387560 tcttatgttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattaga 23387631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 159
Target Start/End: Complemental strand, 28254973 - 28254935
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagta 159  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  28254973 ttacgttattcttaacatatttttcagtcattttcagta 28254935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 24162026 - 24162095
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||||||||||| ||| ||||||||||||||||| ||  ||||| ||||||||  ||| |||||||||    
T  24162026 ttacgttattcttagcatgtttttcagtcattttcaatagattttaccagcaaaatggagaagtattaga 24162095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 18939605 - 18939533
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| ||| |||||||||| | || |||| |||||| |||||||||| |  |||||||||    
T  18939605 atcttacgttattcttaacatgtttttcagtcttattaagtaagttttaccagcaaaacatatgagtattaga 18939533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 19053198 - 19053107
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| ||||| || |||||||||||||| ||| ||| ||||| ||||||||||  ||||  ||||||||  ||| ||||||||| ||||||    
T  19053198 tgatgacatgtcattttacgttattcttagcatgtttatcagttattttcagtagatttttacagcaaaaaggaggagtattagaacaattg 19053107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 20860424 - 20860345
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||| | ||| ||| ||||||| | |||||||||| |||||| ||||||||  ||| ||||||||| ||||||    
T  20860424 atcttacgttactgttagcatgtttttcattaattttcagtaggttttagcagcaaaaaggagaagtattagaacaattg 20860345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 31600088 - 31600159
Alignment:
Q  119 tcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||||||||||||| ||| ||||| |||| ||||| ||| |||||| || |||||||||  |||||||||    
T  31600088 tcttacgttattcttagcatgtttttaagtctttttccgtaggttttaccaacaaaacagaagagtattaga 31600159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 24263762 - 24263840
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaatt 196  Q
    ||||||||||||||||| ||| ||||||||||  ||| |||| |||||| || |||| ||||| | ||||| |||||||    
T  24263762 atcttacgttattcttagcatgtttttcagtctattttagtaggttttaccaacaaatcagaggattattatatcaatt 24263840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 25400753 - 25400807
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    |||||||||||||| ||| ||||||||||||||||| || |||||| ||| ||||    
T  25400753 ttacgttattcttagcatgtttttcagtcattttcattaggttttagcaggaaaa 25400807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 29988055 - 29987985
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    |||||| || || ||||||||||||| ||| ||| ||||||||||||||| ||||  ||||| ||||||||    
T  29988055 ttgatgacaggtcatcttacgttatttttagcatgtttttcagtcatttttagtagattttagcagcaaaa 29987985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 19761578 - 19761639
Alignment:
Q  103 agttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttt 164  Q
    |||||||| || || ||||||||||||| ||| ||| || ||||||||||||||||| ||||    
T  19761578 agttgatgacaggtcatcttacgttattattagcatgttattcagtcattttcagtaggttt 19761639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 20102892 - 20102941
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcatttt 154  Q
    |||||| ||||  ||||||||||||| ||| |||||||||||||||||||    
T  20102892 ttgatgacatgccatcttacgttatttttagcatatttttcagtcatttt 20102941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 25572494 - 25572539
Alignment:
Q  122 tacgttattcttatcatatttttcagtcattttcagtatgttttat 167  Q
    ||||||||||||| ||| ||||||||||| |||||||| |||||||    
T  25572494 tacgttattcttagcatgtttttcagtcaatttcagtaggttttat 25572539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 17831790 - 17831739
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagt 158  Q
    ||||| ||||| ||||||||||||||||| ||| |||||||| ||||||||||    
T  17831790 tgatgacatgtcatcttacgttattcttagcatgtttttcag-cattttcagt 17831739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 22797432 - 22797504
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||| ||  ||| ||||||||||||||||  || ||||||| |||||||  ||| |||||||||    
T  22797432 atcttacgttattattcgcatgtttttcagtcattttcgataggttttattagcaaaaaggagaagtattaga 22797504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 26117534 - 26117474
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgtttta 166  Q
    ||||||||||| ||||||| ||||||||| ||| ||||| | |||||||||| | ||||||    
T  26117534 tgatggcatgtcatcttacattattcttagcatgttttttaatcattttcagcaggtttta 26117474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 29989014 - 29989050
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcatttt 154  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  29989014 atcttacgttattcttagcatatttttcagtaatttt 29989050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 32415830 - 32415878
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcatttt 154  Q
    ||||| ||||| ||||||| ||||||||| ||||||||||||| |||||    
T  32415830 tgatgacatgtcatcttacattattcttagcatatttttcagtaatttt 32415878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 24901294 - 24901215
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||  ||||| ||||||||||||| ||||||||||||||||    
T  24901294 atcttacgttatttttagcatatttttcaatcattttcagtagattttaccagcaaaacagagaagtattagatcaattg 24901215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 15542308 - 15542377
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    ||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  15542308 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttagcagcaaaa 15542377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 26647369 - 26647446
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaat 195  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||| || |||||| ||| ||||||||| ||||    
T  26647369 atcttacgttattcttagcatatttttcagtctttttcagtaggttttaccaacaaaacggaggagtattagagcaat 26647446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 16114887 - 16114807
Alignment:
Q  116 ttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaatt 196  Q
    ||||||||||||||||||| ||| ||||||| |||||||||| |||||||| ||||| ||||||  ||||||||| |||||    
T  16114887 ttatcttacgttattcttagcatgtttttcaatcattttcagcatgttttaccagcataacagatgagtattagagcaatt 16114807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 27973391 - 27973331
Alignment:
Q  115 gttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  27973391 gttatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacagcaaaa 27973331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 21663089 - 21663174
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||| || || ||||||||||||||||| ||| |||||||||||||||||||| |||||| || |||||  ||| |||||||||    
T  21663089 ttgatgacaggtcatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacatcaaaaaggagaagtattaga 21663174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 729221 - 729149
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| |||  ||||||||||||||||||| |||||| ||||||||  ||| |||||||||    
T  729221 atcttacgttattcttagcatgcttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattaga 729149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 33192450 - 33192358
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| || || |||||||| |||||||| ||| ||||||||||| |||||||| |||||| ||||||| ||||  |||||||||| |||||    
T  33192450 ttgatgacaagtcatcttacgctattcttagcatgtttttcagtcaatttcagtaggttttaccagcaaagcagaaaagtattagattaattg 33192358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 15571700 - 15571779
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||| ||| ||| ||||||||||| ||| |||| ||||||  |||||| ||||| ||||||||||||||||    
T  15571700 atcttacgttatttttagcatgtttttcagtcaattttagtaggttttactagcaaagcagaggagtattagatcaattg 15571779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 16363708 - 16363629
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||| ||| ||| |||| |||||||||||||||  ||||| || ||||| |||| ||||||||||||||||    
T  16363708 atcttacgttatttttagcatgttttccagtcattttcagtagtttttaccaacaaaatagaggagtattagatcaattg 16363629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 14235282 - 14235343
Alignment:
Q  104 gttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgtttt 165  Q
    ||||||||||||| ||||||||||| ||||| ||| ||||||||||||||| |||| |||||    
T  14235282 gttgatggcatgtcatcttacgttactcttagcatgtttttcagtcatttttagtaggtttt 14235343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 12210350 - 12210278
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||| ||||||||| ||| ||||||||||| |||||||| |||||| ||||||||  ||| |||||||||    
T  12210350 atcttacattattcttagcatgtttttcagtcaatttcagtaggttttagcagcaaaaaggaggagtattaga 12210278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 21848712 - 21848632
Alignment:
Q  117 tatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||| |||||||||| ||| |||||||||| |||| | || || |||| |||||||||||| ||||||||| ||||||    
T  21848712 tatcttatgttattcttagcatgtttttcagtcgtttttaataggtgttattagcaaaacagaggagtattagagcaattg 21848632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 22621891 - 22621800
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| || |||||||||||| ||||||| ||| ||||||||||||||| |||| | |||| |||||||  |||| || |||||||||||||    
T  22621891 ttgatgacaggttatcttacgtaattcttagcatgtttttcagtcatttttagta-ggtttaccagcaaagaagaggagaattagatcaattg 22621800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 13267933 - 13267855
Alignment:
Q  112 catgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||| ||||||||||||||||||||||||||  ||||| || ||||| ||||||  ||||||| |||  |||||||||    
T  13267933 catgtcatcttacgttattcttatcatattttctagtcaattgcagtaagttttagtagcaaaaaagatgagtattaga 13267855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 11845233 - 11845282
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttat 167  Q
    ||||||||||||||||| ||||||||||||| ||||| |||| |||||||    
T  11845233 atcttacgttattcttagcatatttttcagttatttttagtaggttttat 11845282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 28009837 - 28009752
Alignment:
Q  112 catgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| ||||||| ||||||||| ||| ||||||||||||||||  || |||||| ||||||||  ||| || |||||| ||||||    
T  28009837 catgtcatcttacattattcttagcatgtttttcagtcattttcgctaagttttagcagcaaaaaggaggagcattagagcaattg 28009752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 7221607 - 7221563
Alignment:
Q  112 catgttatcttacgttattcttatcatatttttcagtcattttca 156  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    
T  7221607 catgtcatcttacgttattcttaacatgtttttcagtcattttca 7221563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 18527508 - 18527580
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| ||| ||||||| ||||||||| || |||||| | ||||||  ||| |||||||||    
T  18527508 atcttacgttattcttagcatctttttcactcattttcaataggttttagcggcaaaaaggaggagtattaga 18527580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 20033118 - 20033170
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagt 158  Q
    ||||| ||||||||||||||||||| ||| |||||||||||  ||||||||||    
T  20033118 tgatgacatgttatcttacgttatttttagcatatttttcaaccattttcagt 20033170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 27912161 - 27912113
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcatttt 154  Q
    ||||| ||||| ||||||||||||||||| ||| |||||||||||||||    
T  27912161 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcatttt 27912113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 15526805 - 15526848
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagt 148  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||    
T  15526805 ttgatgacatgtcatcttacgttattcttatcatgtttttcagt 15526848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 24464711 - 24464664
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattt 153  Q
    ||||| ||||| ||||||||||||||||| ||| ||||||||||||||    
T  24464711 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattt 24464664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 14782628 - 14782558
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    |||||| || || ||||||||||||||||| ||| ||||||| ||| ||||| || |||||| ||||||||    
T  14782628 ttgatgacaggtcatcttacgttattcttagcatgtttttcactcaatttcaataggttttagcagcaaaa 14782558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 15158803 - 15158872
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||||||||||| ||| ||||||||| ||||| |||| | |||| ||||||||  ||| |||||||||    
T  15158803 ttacgttattcttagcatgtttttcagttattttaagtaggatttagcagcaaaaaggaggagtattaga 15158872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 21536918 - 21536954
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcatttt 154  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  21536918 atcttacgttatttttagcatatttttcagtcatttt 21536954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 22626166 - 22626238
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| ||| ||||| | |  |||| ||||  ||||| ||||||||||||| |||||||||    
T  22626166 atcttacgttattcttagcatgtttttgaattttttttagtagcttttaccagcaaaacagaggagtattaga 22626238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 25959471 - 25959547
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaa 194  Q
    ||||||| |||||||||  || ||| |||||| ||||||||| |||||| | |||||||| |  |||||||||||||    
T  25959471 atcttacattattcttaggatgtttctcagtctttttcagtaggttttaccggcaaaacatatgagtattagatcaa 25959547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 243829 - 243921
Alignment:
Q  104 gttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||| ||| | ||||||||||||||||| ||||||||| ||||||||| |||| ||||||  |||||||||||| ||||||||| ||||||    
T  243829 gttgatgacatatcatcttacgttattcttagcatattttt-agtcattttaagtaggttttactagcaaaacagaggagtattagagcaattg 243921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 24380359 - 24380444
Alignment:
Q  112 catgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| ||||||||||||||||| ||| ||||||| ||| |||||||| |||||| ||||| ||||||| ||||||||| ||||||    
T  24380359 catgtcatcttacgttattcttagcatgtttttcactcaatttcagtaggttttaccagcagaacagaggagtattagaacaattg 24380444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 22501918 - 22501846
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||||||| ||||||| || ||||||||  |||||| ||||||||||||| |||||||||    
T  22501918 atcttacgttattcttatcatgtttttcaatctttttcagttggttttaccagcaaaacagaggagtattaga 22501846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 13313271 - 13313362
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| |||||  |||||||||||||||| ||| ||||||||||||||||| || |||||| ||||||||  ||| ||||||||| ||||||    
T  13313271 tgatgacatgtcgtcttacgttattcttagcatgtttttcagtcattttcaataggttttagcagcaaaaaggaggagtattagaacaattg 13313362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 30117667 - 30117742
Alignment:
Q  115 gttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||||||||||||| ||| ||| ||||||| |||||||||||| |||||| |||||||||| || | |||||||    
T  30117667 gttatcttacgttatttttagcatgtttttcattcattttcagtaggttttaccagcaaaacataggaatattaga 30117742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 19705083 - 19705017
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagca 172  Q
    ||||| ||||| |||||||||||||||||  || |||||||||||||||||||| |||||| |||||    
T  19705083 tgatgacatgtcatcttacgttattcttagtatgtttttcagtcattttcagtaggttttaacagca 19705017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 4007150 - 4007242
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| || || |||||| |||| | ||| ||| ||||||||||||||| |||| |||| | |||||||| |||| ||||||||||||||||    
T  4007150 ttgatgacaggtcatcttatgttaatattagcatgtttttcagtcatttttagtaggtttcaccagcaaaatagaggagtattagatcaattg 4007242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 7985199 - 7985123
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||||||||| ||| | |||||||||  || |||| |||||| ||||||||||||| ||||||| ||||||||    
T  7985199 ttacgttattcttaacatgtatttcagtcaaatttagtaggttttaccagcaaaacagaggagtattaaatcaattg 7985123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 20400419 - 20400347
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| |||  ||||||||||||||||||  |||||| ||||||||  ||| |||||||||    
T  20400419 atcttacgttattcttagcatgcttttcagtcattttcagtgggttttagcagcaaaaaggaggagtattaga 20400347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 21695413 - 21695472
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgtttt 165  Q
    ||||| ||||| ||||||||||||||||| ||| ||||||||||| |||||||| |||||    
T  21695413 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcaatttcagtaggtttt 21695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 5856876 - 5856785
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| || ||| |||||| ||||||||| ||||||||| ||||||||| |||| ||||||  ||| ||| |||| | ||||||||||||||    
T  5856876 ttgatgacaggttttcttaccttattcttagcatattttt-agtcatttttagtaggttttacaagctaaatagaggaatattagatcaattg 5856785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 14271926 - 14271854
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||||||| ||| |||||||  | ||||||||| ||||||  ||||||||| || |||||||||    
T  14271926 atcttacgttattcttagcatgtttttcaacctttttcagtaggttttactagcaaaacaaaggagtattaga 14271854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 17510989 - 17510917
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||| ||||||||| ||| ||||||||||| |||||||| |||||| | ||||||  ||| |||||||||    
T  17510989 atcttacattattcttagcatgtttttcagtcactttcagtaggttttagctgcaaaaaggaggagtattaga 17510917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 25180721 - 25180812
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtc-attttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| ||||| |||||||||||| |||| ||| |||||||||| || ||| ||| |||||| ||| ||| ||||| ||||||||||||||||    
T  25180721 tgatgacatgtcatcttacgttatccttaacatgtttttcagtctatgttc-gtaggttttaccaggaaaccagaggagtattagatcaattg 25180812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 13833615 - 13833658
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatg 161  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||    
T  13833615 atcttacgttattctttgcatgtttttcagtcattttcagtatg 13833658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 17650060 - 17650006
Alignment:
Q  104 gttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagt 158  Q
    ||||||| || || ||||||||||||||||| ||| |||||||||| ||||||||    
T  17650060 gttgatgacaagtcatcttacgttattcttaacatgtttttcagtcgttttcagt 17650006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 17835628 - 17835550
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaatt 196  Q
    |||||||||||||||||  |||||||||||| | |||||||| ||||||  |||| || || | ||||||||| |||||    
T  17835628 atcttacgttattcttagtatatttttcagttaatttcagtaggttttacaagcagaatagtggagtattagaacaatt 17835550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 2638804 - 2638728
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaat 195  Q
    ||||||||||||| ||| ||||||||| ||||| ||| | ||  ||||| ||||||| ||| ||||||||||||||||    
T  2638804 atcttacgttatttttagcatattttt-agtcaattttaatagattttaccagcaaagcagggtagtattagatcaat 2638728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 18007620 - 18007564
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    ||||||||||||| ||| ||| |||||||||||||||||||| |||||| || |||||    
T  18007620 atcttacgttattgttagcat-tttttcagtcattttcagtaggttttaccaacaaaa 18007564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 24090892 - 24090969
Alignment:
Q  120 cttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||||| ||| ||||||||| ||||| | || |||||| ||||||||  ||  ||||||||| ||||||    
T  24090892 cttacgttattcttagcatgtttttcagttattttaattaggttttagcagcaaaaaggaagagtattagaacaattg 24090969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 24583190 - 24583255
Alignment:
Q  125 gttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||||||| ||| ||||||||||||||| ||||  ||||| ||||||||  ||| |||||||||    
T  24583190 gttattcttagcatgtttttcagtcatttttagtagattttagcagcaaaaaggaggagtattaga 24583255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 28318591 - 28318558
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcat 151  Q
    ||||||||||||||||| ||||||||||||||||    
T  28318591 atcttacgttattcttagcatatttttcagtcat 28318558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 28621710 - 28621641
Alignment:
Q  97 ctaggaagttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgtttta 166  Q
    |||||| ||||||| || || |||| |||||||||||| ||| ||||||||| ||||||| || ||||||    
T  28621710 ctaggatgttgatgacaggtcatctaacgttattcttagcatgtttttcagttattttcattaggtttta 28621641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 5152004 - 5151964
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagt 158  Q
    ||||||||||||||||| ||| ||||||||| |||||||||    
T  5152004 atcttacgttattcttaacatgtttttcagtaattttcagt 5151964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 12342890 - 12342981
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||| ||||| ||||||||||||||||| | | ||||||||||  ||| |||| |||||| || | ||||| || ||||||||| ||||||    
T  12342890 ttgatgacatgtcatcttacgttattcttaacttgtttttcagtctattttagtaggttttaccaac-aaacaaaggagtattagagcaattg 12342981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 18446871 - 18446943
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||||||||| ||| ||| ||||||||| |||| ||||| | |||| ||||||||  ||| |||||||||    
T  18446871 atcttacgttatttttaccatgtttttcagttatttccagtaggatttagcagcaaaaaggaggagtattaga 18446943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 197
Target Start/End: Complemental strand, 14573547 - 14573455
Alignment:
Q  104 gttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||| ||| | ||||||||||||||||| ||||||||| ||||||||| |||| ||||||  |||||||||||| ||||||||| ||||||    
T  14573547 gttgatgacatatcatcttacgttattcttagcatattttt-agtcattttaagtaggttttactagcaaaacagaggagtattagagcaattg 14573455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 7583882 - 7583798
Alignment:
Q  113 atgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| |||||||||||||||| ||| ||||||| |||||||||||| |||||| ||||||||  ||| ||||||||| ||||||    
T  7583882 atgttgtcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattagaacaattg 7583798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 9849719 - 9849798
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||||||||||||  || ||||||||||||||| |||| |||||| || ||||||| || ||||||||||||||||    
T  9849719 atcttacgttattcttagtatgtttttcagtcatttttagtaggttttaccaacaaaacaaaggagtattagatcaattg 9849798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 18750924 - 18750830
Alignment:
Q  103 agttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||| ||||| ||||||| ||||| ||| ||||||||||||| |||||||||| | |||| ||||||||  ||| ||||||||| ||||||    
T  18750924 agttgatgacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattg 18750830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 8968072 - 8968140
Alignment:
Q  107 gatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    |||| ||||| ||||||||||||||||| ||| ||||||||||||||| |||| |||||| ||||||||    
T  8968072 gatgacatgtcatcttacgttattcttagcatgtttttcagtcattttaagtaggttttagcagcaaaa 8968140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 15166553 - 15166481
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||||| ||||||||| ||| |||||||||||||||||||| |||||| ||||||||  ||| |||||||||    
T  15166553 atcttacattattcttagcatgtttttcagtcattttcagtaggttttagcagcaaaaacgaggagtattaga 15166481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 17335355 - 17335439
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||| ||||| ||||||||||||||||  ||| |||||||||||||||||||| ||||||  |||||||  ||| |||||||||    
T  17335355 tgatgacatgtcatcttacgttattcttggcatgtttttcagtcattttcagtaagttttagaagcaaaaaggaggagtattaga 17335439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 25025191 - 25025132
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaaca 177  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| |||||| ||||||||||    
T  25025191 atcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaaca 25025132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 9263359 - 9263441
Alignment:
Q  115 gttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||||||||||| ||| ||| |||||||||||  |||| || |||||||||||| ||| ||| ||||||||| ||||||    
T  9263359 gttatcttacgttatttttagcatgtttttcagtcaaattcaataggttttatcagcagaactgaggagtattagaacaattg 9263441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 9054090 - 9054010
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattgg 198  Q
    ||||||||||| ||||| ||| |||| ||||||||||||||| ||||||  |||| || |||  |||||||||||||||||    
T  9054090 atcttacgttaatcttagcatgttttgcagtcattttcagtaggttttacaagcagaatagatgagtattagatcaattgg 9054010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 11512038 - 11512110
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||| |||||||||||||| ||||||||||| || ||||| ||||||  ||||||||| || |||||||||    
T  11512038 atcttatgttattcttatcatgtttttcagtcaattgcagtaggttttacaagcaaaacaaaggagtattaga 11512110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 17277942 - 17277851
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| ||||| ||||||||||||||||| ||| ||||||||||  ||| |||| |||||| ||||||| || |   |||||||||||||||    
T  17277942 tgatgacatgtcatcttacgttattcttagcatgtttttcagtctattttagtaagttttaccagcaaagcaaatgggtattagatcaattg 17277851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 12836082 - 12836160
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaatt 196  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||| |||||  || |||| | || ||||||||| |||||    
T  12836082 atcttacgttattcttagcatgtttttcagtcatttttagtatattttacaaggaaaataaaggagtattagaacaatt 12836160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 8928312 - 8928361
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcatttt 154  Q
    |||||| ||||| ||||||||||||| ||| |||||||||||||||||||    
T  8928312 ttgatgacatgtcatcttacgttatttttagcatatttttcagtcatttt 8928361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 10106380 - 10106301
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||| ||||||||| ||| |||||| ||||||||||||| |||||| | ||||||  ||| ||||||| | ||||||    
T  10106380 atcttacattattcttagcatgtttttctgtcattttcagtaggttttagctgcaaaaaggaggagtattacaacaattg 10106301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 17434519 - 17434440
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||| ||| ||| ||||| |||||||||||||| ||||||   ||  || |||| ||||||||||||||||    
T  17434519 atcttacgttatttttagcatgtttttaagtcattttcagtaggttttaattgcggaatagaggagtattagatcaattg 17434440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 22350252 - 22350331
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||| ||||||||| ||| |||||||||   ||| |||| |||||| ||||||| ||||  ||||||||||||||||    
T  22350252 atcttacattattcttagcatgtttttcagtttattttagtaggttttaccagcaaaccagaagagtattagatcaattg 22350331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 20828152 - 20828230
Alignment:
Q  119 tcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||||||||||| ||| |||||||||| |||||| || || ||| |||||||| | || ||||||| | ||||||    
T  20828152 tcttacgttattcttagcatctttttcagtctttttcaataggtattagcagcaaaataaaggagtattacaacaattg 20828230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 11782577 - 11782520
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    ||||||||||||||||| ||| ||||| ||||||||| |||| |||||  ||||||||    
T  11782577 atcttacgttattcttaacatgttttttagtcattttaagtaggtttttacagcaaaa 11782520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 17711388 - 17711319
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||| ||||||||| ||| ||||| |||||||||||||| |||||| | ||||||  ||| |||||||||    
T  17711388 ttacattattcttagcatgttttttagtcattttcagtaggttttagctgcaaaaatgaggagtattaga 17711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 15047849 - 15047793
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaaca 177  Q
    |||||||||||||  ||| ||||||||||| |||||||| |||||||| ||| ||||    
T  15047849 ttacgttattcttggcatgtttttcagtcaatttcagtaggttttatccgcataaca 15047793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 15106575 - 15106631
Alignment:
Q  121 ttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaaca 177  Q
    |||||||||||||  ||| ||||||||||| |||||||| |||||||| ||| ||||    
T  15106575 ttacgttattcttggcatgtttttcagtcaatttcagtaggttttatccgcataaca 15106631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 19335237 - 19335273
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcatttt 154  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  19335237 atcttacgttattcttagcatattttttagtcatttt 19335273  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 19666961 - 19666993
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtca 150  Q
    ||||||||||||||||| |||||||||||||||    
T  19666961 atcttacgttattcttagcatatttttcagtca 19666993  T

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Target: scaffold0024 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 41417 - 41345
Alignment:
Q  125 gttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||||| ||| ||||||||| ||||| |||| |||||| ||||||||||||| ||||||||||||||||    
T  41417 gttattcttagcatgtttttcagttatttttagtaggttttaccagcaaaacagaggagtattagatcaattg 41345  T

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Target: scaffold0451 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 10105 - 10184
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    |||||||| |||| ||| |||  ||||||||||||||||||| ||||||  |||||||||||| ||||||||||||||||    
T  10105 atcttacgctattattagcatgcttttcagtcattttcagtaggttttactagcaaaacagaggagtattagatcaattg 10184  T

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Target: scaffold0386 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 4884 - 4963
Alignment:
Q  118 atcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||||||||||||||| ||| ||||||||||| ||| |||| |||||| |||||||  |||| ||||||||||||||||    
T  4884 atcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaagtagaggagtattagatcaattg 4963  T

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Target: scaffold0043 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 88436 - 88527
Alignment:
Q  106 tgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattagatcaattg 197  Q
    ||||| ||||| ||||||||||||||||| ||| ||||||| |||||||||||| |||||| ||  |||| |||| ||| ||||| ||||||    
T  88436 tgatgacatgtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccaaaaaaatagaggagtcttagagcaattg 88527  T

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Target: scaffold0032 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 92825 - 92912
Alignment:
Q  103 agttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||||| || |||||||||||||||||||| ||| ||||||||| ||||| |||| | |||| |||||||| |||| | |||||||    
T  92825 agttgatgacaagttatcttacgttattcttagcatgtttttcagttatttttagtagggtttagcagcaaaaaagaggaatattaga 92912  T

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Target: scaffold0555 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 6551 - 6466
Alignment:
Q  105 ttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||| ||||||| || | |||| || |||||  ||| |||||||||    
T  6551 ttgatgacatgttatcttacgttattcttagcatgtttttcagttattttcaataggatttagcaacaaaaatgaggagtattaga 6466  T

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Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 35269 - 35214
Alignment:
Q  112 catgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttat 167  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||| || |||||||    
T  35269 catgttatcttatgttattcttagcatgtttttcagtcattttcaataggttttat 35214  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 4908 - 4837
Alignment:
Q  119 tcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaacagagtagtattaga 190  Q
    ||||| ||||||| || ||| |||||||||||||||||||| |||||| ||||||||  ||| |||||||||    
T  4908 tcttatgttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattaga 4837  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 192222 - 192150
Alignment:
Q  103 agttgatggcatgttatcttacgttattcttatcatatttttcagtcattttcagtatgttttatcagcaaaa 175  Q
    |||||||| || || ||||||||||||| ||| |||  |||||||||||||||| || |||||| ||||||||    
T  192222 agttgatgacaggtcatcttacgttatttttagcatggttttcagtcattttcaataggttttagcagcaaaa 192150  T

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