View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11020_low_6 (Length: 206)

Name: NF11020_low_6
Description: NF11020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11020_low_6
NF11020_low_6
[»] scaffold0295 (2 HSPs)
scaffold0295 (87-206)||(4791-4910)
scaffold0295 (91-203)||(5222-5334)
[»] chr5 (41 HSPs)
chr5 (87-206)||(18182968-18183087)
chr5 (87-206)||(18183397-18183516)
chr5 (89-206)||(8647438-8647555)
chr5 (87-206)||(2865183-2865302)
chr5 (87-206)||(19359564-19359683)
chr5 (88-206)||(29455170-29455288)
chr5 (89-206)||(5819357-5819474)
chr5 (87-206)||(8647866-8647985)
chr5 (87-206)||(15708969-15709088)
chr5 (89-206)||(19359136-19359253)
chr5 (85-206)||(24362264-24362385)
chr5 (87-206)||(5818927-5819046)
chr5 (87-206)||(8460928-8461047)
chr5 (88-206)||(29454739-29454857)
chr5 (91-206)||(2864756-2864871)
chr5 (91-206)||(14215243-14215358)
chr5 (88-206)||(8461359-8461477)
chr5 (87-197)||(15372310-15372420)
chr5 (88-202)||(25000521-25000635)
chr5 (95-206)||(24325218-24325329)
chr5 (87-201)||(14215676-14215790)
chr5 (90-206)||(4222150-4222266)
chr5 (95-206)||(24361843-24361954)
chr5 (89-206)||(164191-164307)
chr5 (89-206)||(4623148-4623265)
chr5 (89-206)||(15709397-15709513)
chr5 (87-204)||(24331557-24331676)
chr5 (87-206)||(164619-164738)
chr5 (91-202)||(15371873-15371983)
chr5 (88-206)||(16018588-16018705)
chr5 (89-206)||(4219663-4219780)
chr5 (87-206)||(14463948-14464067)
chr5 (87-206)||(16019015-16019134)
chr5 (107-206)||(25000108-25000207)
chr5 (89-206)||(7349445-7349562)
chr5 (90-206)||(6018315-6018430)
chr5 (89-206)||(7348559-7348676)
chr5 (95-206)||(6019198-6019309)
chr5 (91-206)||(24331988-24332107)
chr5 (102-206)||(4624653-4624757)
chr5 (171-206)||(14462686-14462721)
[»] chr2 (37 HSPs)
chr2 (87-206)||(22374318-22374437)
chr2 (88-206)||(40027139-40027257)
chr2 (86-206)||(22374753-22374873)
chr2 (87-206)||(239351-239469)
chr2 (87-206)||(18451259-18451378)
chr2 (87-206)||(26538507-26538626)
chr2 (87-204)||(11090950-11091067)
chr2 (89-206)||(28616613-28616730)
chr2 (87-206)||(11090519-11090638)
chr2 (87-206)||(40815773-40815892)
chr2 (88-206)||(28617042-28617160)
chr2 (91-206)||(40815347-40815462)
chr2 (87-206)||(43058761-43058879)
chr2 (88-206)||(18450829-18450947)
chr2 (88-206)||(20444748-20444866)
chr2 (88-206)||(26538096-26538214)
chr2 (92-206)||(40027568-40027682)
chr2 (90-206)||(239780-239896)
chr2 (87-203)||(1978106-1978222)
chr2 (87-206)||(1978537-1978656)
chr2 (87-206)||(7446774-7446893)
chr2 (87-206)||(28847123-28847242)
chr2 (90-204)||(35781093-35781207)
chr2 (87-204)||(20440461-20440578)
chr2 (95-206)||(3025472-3025583)
chr2 (89-206)||(35779708-35779825)
chr2 (89-206)||(43058333-43058450)
chr2 (91-206)||(8972239-8972354)
chr2 (91-206)||(14432569-14432684)
chr2 (92-206)||(14432145-14432259)
chr2 (88-206)||(7446341-7446459)
chr2 (91-202)||(15551501-15551612)
chr2 (91-206)||(15552482-15552596)
chr2 (92-206)||(8425358-8425471)
chr2 (92-206)||(8425788-8425902)
chr2 (89-206)||(3025891-3026006)
chr2 (92-164)||(3824179-3824251)
[»] chr1 (40 HSPs)
chr1 (88-206)||(50970706-50970824)
chr1 (87-206)||(15646190-15646309)
chr1 (91-206)||(17433643-17433758)
chr1 (87-206)||(18984117-18984236)
chr1 (88-206)||(39154448-39154566)
chr1 (89-206)||(29306953-29307070)
chr1 (90-206)||(8678542-8678658)
chr1 (87-206)||(15173522-15173640)
chr1 (91-206)||(33144347-33144462)
chr1 (87-206)||(50970276-50970395)
chr1 (88-206)||(5540246-5540364)
chr1 (88-206)||(15646623-15646741)
chr1 (88-206)||(18984547-18984665)
chr1 (89-206)||(8678969-8679086)
chr1 (89-206)||(26859059-26859176)
chr1 (89-206)||(29307370-29307487)
chr1 (88-205)||(29869619-29869736)
chr1 (89-206)||(29870047-29870164)
chr1 (90-206)||(5539817-5539933)
chr1 (87-206)||(9018971-9019090)
chr1 (91-206)||(39154021-39154136)
chr1 (90-202)||(4636403-4636515)
chr1 (92-206)||(5963006-5963120)
chr1 (91-204)||(21856044-21856157)
chr1 (97-206)||(33143925-33144034)
chr1 (87-206)||(9019391-9019510)
chr1 (87-206)||(26859487-26859606)
chr1 (92-206)||(15173099-15173213)
chr1 (89-206)||(17433216-17433333)
chr1 (89-205)||(21856472-21856588)
chr1 (88-206)||(52268289-52268407)
chr1 (90-206)||(5962579-5962695)
chr1 (97-188)||(47827034-47827125)
chr1 (91-205)||(52269177-52269291)
chr1 (89-206)||(17112282-17112398)
chr1 (87-175)||(2733416-2733504)
chr1 (1-51)||(38505007-38505057)
chr1 (91-164)||(47826966-47827039)
chr1 (149-206)||(4636033-4636089)
chr1 (89-170)||(50419725-50419806)
[»] scaffold0951 (2 HSPs)
scaffold0951 (74-206)||(2095-2227)
scaffold0951 (87-206)||(1665-1784)
[»] chr7 (26 HSPs)
chr7 (89-205)||(35288903-35289019)
chr7 (88-206)||(37786766-37786884)
chr7 (87-206)||(19590953-19591072)
chr7 (87-206)||(19830418-19830537)
chr7 (89-206)||(19590525-19590642)
chr7 (87-206)||(2658837-2658956)
chr7 (87-206)||(32004612-32004731)
chr7 (87-206)||(34533789-34533908)
chr7 (87-206)||(38859069-38859188)
chr7 (87-206)||(35289329-35289448)
chr7 (87-206)||(23952728-23952848)
chr7 (89-205)||(32005043-32005159)
chr7 (86-206)||(34534219-34534339)
chr7 (87-206)||(37787195-37787314)
chr7 (102-206)||(29099863-29099967)
chr7 (87-205)||(38160949-38161067)
chr7 (88-206)||(38858642-38858760)
chr7 (87-206)||(2659268-2659387)
chr7 (87-201)||(4478133-4478247)
chr7 (92-206)||(4641443-4641557)
chr7 (88-206)||(19830848-19830965)
chr7 (92-206)||(29100279-29100393)
chr7 (90-206)||(28584350-28584466)
chr7 (92-205)||(4641873-4641983)
chr7 (95-206)||(23953157-23953268)
chr7 (87-206)||(28583437-28583556)
[»] chr4 (55 HSPs)
chr4 (74-206)||(20470939-20471071)
chr4 (87-205)||(23494872-23494990)
chr4 (89-206)||(45082852-45082969)
chr4 (87-206)||(25447664-25447783)
chr4 (88-206)||(15523662-15523780)
chr4 (89-206)||(12234757-12234874)
chr4 (89-206)||(25447247-25447364)
chr4 (89-206)||(46193405-46193522)
chr4 (87-206)||(15523233-15523352)
chr4 (89-206)||(11153575-11153692)
chr4 (89-206)||(22434179-22434296)
chr4 (91-203)||(18763951-18764063)
chr4 (87-206)||(4219987-4220106)
chr4 (91-206)||(46193833-46193948)
chr4 (87-203)||(25937668-25937784)
chr4 (91-206)||(2118295-2118410)
chr4 (87-206)||(12234327-12234446)
chr4 (91-206)||(33109686-33109801)
chr4 (87-206)||(33109892-33110011)
chr4 (87-206)||(54995067-54995186)
chr4 (88-206)||(11153145-11153263)
chr4 (92-202)||(18751602-18751712)
chr4 (88-206)||(25938099-25938217)
chr4 (92-206)||(48526609-48526723)
chr4 (91-206)||(23494445-23494560)
chr4 (91-206)||(38962247-38962362)
chr4 (88-206)||(48526195-48526313)
chr4 (86-204)||(54995498-54995615)
chr4 (91-206)||(4219559-4219674)
chr4 (87-206)||(22434605-22434723)
chr4 (87-206)||(45082430-45082548)
chr4 (87-206)||(51021224-51021342)
chr4 (111-206)||(43243708-43243803)
chr4 (87-206)||(51020795-51020914)
chr4 (92-206)||(2118723-2118837)
chr4 (88-206)||(22170365-22170482)
chr4 (90-206)||(20958288-20958403)
chr4 (87-203)||(48713777-48713893)
chr4 (89-206)||(35363028-35363146)
chr4 (89-206)||(48294970-48295088)
chr4 (106-206)||(12503453-12503553)
chr4 (87-203)||(48293592-48293708)
chr4 (111-206)||(43281219-43281313)
chr4 (88-206)||(10258315-10258433)
chr4 (92-206)||(16690939-16691053)
chr4 (96-201)||(20957196-20957301)
chr4 (90-206)||(44892576-44892692)
chr4 (87-195)||(48708293-48708401)
chr4 (90-198)||(44890518-44890626)
chr4 (88-159)||(16318251-16318322)
chr4 (89-206)||(16691500-16691616)
chr4 (147-206)||(43242328-43242387)
chr4 (89-187)||(55189528-55189626)
chr4 (150-206)||(44220805-44220861)
chr4 (157-206)||(12503864-12503913)
[»] chr8 (29 HSPs)
chr8 (87-206)||(41681132-41681251)
chr8 (88-206)||(13225067-13225185)
chr8 (87-206)||(11656453-11656572)
chr8 (87-206)||(19176718-19176837)
chr8 (87-206)||(34540976-34541095)
chr8 (88-206)||(11656885-11657003)
chr8 (87-202)||(19176288-19176403)
chr8 (88-206)||(9930085-9930203)
chr8 (92-206)||(33328161-33328275)
chr8 (89-206)||(41681562-41681679)
chr8 (92-206)||(9928912-9929026)
chr8 (92-206)||(12572279-12572393)
chr8 (88-206)||(44831246-44831364)
chr8 (87-204)||(12571861-12571978)
chr8 (90-206)||(31133648-31133764)
chr8 (89-198)||(9178071-9178180)
chr8 (87-206)||(31133218-31133337)
chr8 (87-206)||(33742920-33743038)
chr8 (93-206)||(13224645-13224757)
chr8 (91-202)||(33328572-33328683)
chr8 (87-206)||(44831673-44831792)
chr8 (86-197)||(11336959-11337070)
chr8 (86-206)||(4629794-4629914)
chr8 (88-185)||(8074000-8074097)
chr8 (92-179)||(4630241-4630328)
chr8 (87-198)||(10918124-10918235)
chr8 (142-206)||(33743347-33743411)
chr8 (168-206)||(43958264-43958302)
chr8 (87-122)||(9177665-9177700)
[»] chr6 (34 HSPs)
chr6 (87-206)||(2319670-2319789)
chr6 (87-206)||(12935155-12935274)
chr6 (87-206)||(20741098-20741217)
chr6 (87-206)||(23075556-23075675)
chr6 (92-206)||(10899942-10900056)
chr6 (89-206)||(10900358-10900475)
chr6 (87-206)||(11445415-11445534)
chr6 (87-206)||(22219781-22219900)
chr6 (88-206)||(15828069-15828187)
chr6 (87-206)||(11444985-11445104)
chr6 (87-206)||(18257135-18257254)
chr6 (89-206)||(11277010-11277127)
chr6 (87-206)||(28472635-28472754)
chr6 (87-206)||(29859824-29859943)
chr6 (89-206)||(1149860-1149977)
chr6 (90-206)||(31470744-31470860)
chr6 (87-206)||(12935585-12935704)
chr6 (92-206)||(2322646-2322760)
chr6 (92-206)||(18504922-18505036)
chr6 (88-206)||(31470314-31470432)
chr6 (89-206)||(18257565-18257682)
chr6 (88-186)||(23073998-23074096)
chr6 (90-206)||(18505347-18505463)
chr6 (88-206)||(20741529-20741650)
chr6 (87-177)||(1149463-1149553)
chr6 (91-202)||(29035069-29035180)
chr6 (89-206)||(4811372-4811489)
chr6 (89-198)||(4811692-4811801)
chr6 (90-206)||(15827639-15827757)
chr6 (92-206)||(3835154-3835268)
chr6 (88-206)||(11276589-11276707)
chr6 (91-206)||(29033436-29033551)
chr6 (87-206)||(18296143-18296262)
chr6 (89-145)||(22534214-22534270)
[»] chr3 (53 HSPs)
chr3 (92-206)||(41046703-41046817)
chr3 (89-206)||(39556005-39556122)
chr3 (87-206)||(4275792-4275911)
chr3 (87-206)||(17464489-17464608)
chr3 (87-202)||(31779084-31779199)
chr3 (87-206)||(48452987-48453106)
chr3 (88-206)||(30098191-30098309)
chr3 (88-206)||(39555577-39555695)
chr3 (87-206)||(5136978-5137097)
chr3 (87-206)||(20840558-20840677)
chr3 (87-206)||(43973868-43973987)
chr3 (88-206)||(20840989-20841107)
chr3 (89-206)||(25853234-25853351)
chr3 (89-206)||(37727358-37727475)
chr3 (88-206)||(27393660-27393778)
chr3 (88-206)||(37726928-37727046)
chr3 (87-204)||(5137411-5137528)
chr3 (89-206)||(29801356-29801473)
chr3 (89-206)||(43973441-43973558)
chr3 (87-206)||(22424812-22424931)
chr3 (87-202)||(29801848-29801963)
chr3 (88-206)||(23644461-23644579)
chr3 (88-206)||(31778652-31778770)
chr3 (92-206)||(32534962-32535076)
chr3 (89-206)||(32535386-32535508)
chr3 (93-206)||(22425241-22425354)
chr3 (87-206)||(24300984-24301103)
chr3 (91-206)||(25853655-25853770)
chr3 (87-206)||(30104480-30104599)
chr3 (89-206)||(23228436-23228552)
chr3 (89-206)||(23644893-23645010)
chr3 (87-206)||(26837784-26837902)
chr3 (87-206)||(51474762-51474881)
chr3 (88-206)||(27394005-27394123)
chr3 (90-206)||(32697128-32697244)
chr3 (92-206)||(25612405-25612519)
chr3 (92-206)||(26274570-26274684)
chr3 (87-206)||(26837358-26837477)
chr3 (88-197)||(17464929-17465038)
chr3 (89-206)||(50116837-50116954)
chr3 (90-203)||(51473429-51473542)
chr3 (91-206)||(25420569-25420684)
chr3 (87-206)||(37220555-37220674)
chr3 (92-202)||(24300560-24300669)
chr3 (92-206)||(41047127-41047239)
chr3 (87-206)||(26274995-26275113)
chr3 (87-200)||(45965936-45966049)
chr3 (87-164)||(37222041-37222118)
chr3 (92-203)||(32695706-32695817)
chr3 (114-203)||(18010176-18010265)
chr3 (90-186)||(25419145-25419242)
chr3 (152-203)||(23227319-23227370)
chr3 (87-164)||(49407794-49407871)
[»] scaffold0417 (2 HSPs)
scaffold0417 (89-206)||(11051-11168)
scaffold0417 (111-206)||(10643-10738)
[»] scaffold0113 (1 HSPs)
scaffold0113 (88-203)||(28674-28789)
[»] scaffold0273 (2 HSPs)
scaffold0273 (86-206)||(4635-4755)
scaffold0273 (129-206)||(4243-4320)
[»] scaffold0019 (1 HSPs)
scaffold0019 (87-206)||(134101-134220)
[»] scaffold1223 (2 HSPs)
scaffold1223 (89-206)||(1169-1286)
scaffold1223 (91-206)||(755-869)
[»] scaffold0432 (2 HSPs)
scaffold0432 (92-206)||(10300-10414)
scaffold0432 (92-188)||(9935-10031)
[»] scaffold0007 (2 HSPs)
scaffold0007 (92-204)||(64735-64847)
scaffold0007 (88-206)||(64301-64419)
[»] scaffold0176 (2 HSPs)
scaffold0176 (89-186)||(19069-19166)
scaffold0176 (88-206)||(18834-18952)
[»] scaffold1585 (1 HSPs)
scaffold1585 (90-201)||(568-679)
[»] scaffold1696 (1 HSPs)
scaffold1696 (93-205)||(454-565)
[»] scaffold0027 (2 HSPs)
scaffold0027 (87-206)||(42586-42705)
scaffold0027 (92-206)||(42172-42286)
[»] scaffold0076 (1 HSPs)
scaffold0076 (92-188)||(8455-8551)
[»] scaffold0157 (2 HSPs)
scaffold0157 (106-206)||(16924-17024)
scaffold0157 (157-206)||(16564-16613)
[»] scaffold0057 (2 HSPs)
scaffold0057 (92-206)||(61886-62000)
scaffold0057 (87-163)||(61026-61102)
[»] scaffold0168 (1 HSPs)
scaffold0168 (144-206)||(7716-7778)


Alignment Details
Target: scaffold0295 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 4791 - 4910
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4791 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 4890  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  4891 gttgcatttttcgtcctacc 4910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 203
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||| || ||||||||||||||| |||| |||  |||||||||||||||||| |    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  191 catttttcgtcct 203  Q
    |||||||||||||    
T  5234 catttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 5e-52; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 18182968 - 18183087
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  18183068 gttgcatttttcgtcctacc 18183087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 18183516 - 18183397
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  18183516 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183417  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  18183416 gttgcatttttcgtcctacc 18183397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 8647438 - 8647555
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  8647538 tgcatttttcgtcctacc 8647555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 2865302 - 2865183
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    ||  ||||||||||||||||    
T  2865202 gtttcatttttcgtcctacc 2865183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 19359683 - 19359564
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || | |||||||||||||||    
T  19359583 gttggatttttcgtcctacc 19359564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 29455288 - 29455170
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||| ||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  29455188 ttgcatttttcgtcctacc 29455170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 5819474 - 5819357
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  5819374 tgcatttttcgtcctacc 5819357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 8647985 - 8647866
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  8647985 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 8647886  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||| ||||    
T  8647885 gttgcatttttcgtcatacc 8647866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 15708969 - 15709088
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  15708969 taggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 15709068  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||| ||||||||||||    
T  15709069 gttgcatatttcgtcctacc 15709088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 19359136 - 19359253
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  19359236 tgcatttttcgtcctacc 19359253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 24362385 - 24362264
Alignment:
Q  85 cgtaggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattt 184  Q
    ||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||||| ||||||||    
T  24362385 cgtaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattt 24362286  T
Q  185 ttgtcgcatttttcgtcctacc 206  Q
    |||| |||||||||||||||||    
T  24362285 ttgttgcatttttcgtcctacc 24362264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 5818927 - 5819046
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||| ||||    
T  5819027 gttgcatttttcgtcttacc 5819046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 8460928 - 8461047
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||| |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||| ||||    
T  8461028 gttgcatttttcgtcatacc 8461047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 29454739 - 29454857
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  188 tcgcatttttcgtcctacc 206  Q
      |||||||||||||||||    
T  29454839 ctgcatttttcgtcctacc 29454857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 2864756 - 2864871
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| | ||||||||||||||| |||||| || |||||||||||||||||| ||||||| ||||||||||||||||||||||| |    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  2864856 catttttcgtcctacc 2864871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 14215243 - 14215358
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| |||||||||||| |||| ||||||||||| || ||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  14215343 catttttcgtcctacc 14215358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 8461477 - 8461359
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  188 tcgcatttttcgtcctacc 206  Q
      |||||||||||| ||||    
T  8461377 ctgcatttttcgtcatacc 8461359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 15372420 - 15372310
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  15372420 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 15372321  T
Q  187 gtcgcattttt 197  Q
    || ||||||||    
T  15372320 gttgcattttt 15372310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 25000635 - 25000521
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| || |||||||||||||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  188 tcgcatttttcgtcc 202  Q
    | |||||||||||||    
T  25000535 ttgcatttttcgtcc 25000521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 95 - 206
Target Start/End: Original strand, 24325218 - 24325329
Alignment:
Q  95 attacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatt 194  Q
    |||||||||||||||  | |||||||||||||  ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  195 tttcgtcctacc 206  Q
    ||||||||||||    
T  24325318 tttcgtcctacc 24325329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 14215790 - 14215676
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||| |||||||| |||||||||| |||||| ||||||||| || ||||||||||||||||||||||| |||||||||| ||||||||||    
T  14215790 taggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 14215691  T
Q  187 gtcgcatttttcgtc 201  Q
    || ||||||||||||    
T  14215690 gttgcatttttcgtc 14215676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 4222266 - 4222150
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    |||||||||||||||||||| ||||||||||| || || |||||| |||||||||||||||||||||||||||||| ||| |||| ||||||||||| |     
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||||||||||||    
T  4222166 gcatttttcgtcctacc 4222150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 95 - 206
Target Start/End: Original strand, 24361843 - 24361954
Alignment:
Q  95 attacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatt 194  Q
    |||||||||||||||  | |||||||||||||  ||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  195 tttcgtcctacc 206  Q
    ||||||||||||    
T  24361943 tttcgtcctacc 24361954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 164191 - 164307
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||| |||| ||||||| |||| ||||||||||| ||||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgt 164289  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  164290 tgcatttttcgtcctacc 164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 4623148 - 4623265
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||||||||||||||||| | |||| |||||| ||||| ||||  |||||||||||||||||| |||||||||||||||||||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  189 cgcatttttcgtcctacc 206  Q
     ||||||| |||||||||    
T  4623248 ggcattttccgtcctacc 4623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 15709513 - 15709397
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||||| ||||||||||||||| | |||||| ||||||||| ||||||||||||||||| ||||||| | ||||||||| |||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgccc-tttaaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  15709414 tgcatttttcgtcctacc 15709397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 24331557 - 24331676
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatc--attt 184  Q
    ||||||||||||||||||||||| ||||||||||  ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||   |||    
T  24331557 taggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctatttt 24331656  T
Q  185 ttgtcgcatttttcgtccta 204  Q
    |||| ||||||||| |||||    
T  24331657 ttgttgcatttttcatccta 24331676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 164738 - 164619
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||| | ||||| || || |||||||||| ||| || ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  164738 taggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 164639  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||| ||||||||    
T  164638 gttgcattttttgtcctacc 164619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 15371873 - 15371983
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    |||||||||||||||| || |||| |||||| ||||| |||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  191 catttttcgtcc 202  Q
    ||||||||||||    
T  15371972 catttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 16018588 - 16018705
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||| || |||||||||||||||| ||||||||| |||||||||||||| ||||||     
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | ||||||| |||||||||    
T  16018687 ttgcattttccgtcctacc 16018705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 4219663 - 4219780
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||| || ||||||||||| ||| |||| ||| |||||||||| ||||||||||||||||| | |||||| | |||||||||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  4219763 tgcatttttcgtcctacc 4219780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 14464067 - 14463948
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||  |  || |||||||||| ||||||||| | |||||||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  187 gtcgcatttttcgtcctacc 206  Q
     | |||||||||||||||||    
T  14463967 attgcatttttcgtcctacc 14463948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 16019134 - 16019015
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| || ||||||||| |||| |||||| ||||| ||| ||||||||| |||| |||||||| |||||||||||||||||    
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || | |||||||||||||||    
T  16019034 gttgtatttttcgtcctacc 16019015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 25000108 - 25000207
Alignment:
Q  107 gtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    ||||||||||||||||||||| |||||  |||||||||||| ||||||||||| |||||||||||| ||||||||||||| | |||||||| ||||||||    
T  25000108 gtcatcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacc 25000207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 7349562 - 7349445
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||| ||||| ||| ||||||||||| |||||||   ||||||| |||||||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  189 cgcatttttcgtcctacc 206  Q
     ||| ||||| |||||||    
T  7349462 tgcacttttcatcctacc 7349445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 6018315 - 6018430
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    ||||||||||| |||||||  ||||||||||  ||||| ||||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||     
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  190 gcatttttcgtcctacc 206  Q
    ||| |||| ||||||||    
T  6018414 gcagttttagtcctacc 6018430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 7348559 - 7348676
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||| |||||||| || |||||| | ||||| |||||| ||||| |||||||||||||||||||||||   ||||||  |||||||||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  189 cgcatttttcgtcctacc 206  Q
     ||| |||||||||||||    
T  7348659 tgcacttttcgtcctacc 7348676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 206
Target Start/End: Complemental strand, 6019309 - 6019198
Alignment:
Q  95 attacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgca-t 193  Q
    |||||| ||||||||||| ||||||||| |||| ||||||||| || ||| |||||||||||||||||||  ||| || ||||||||||||||| ||| |    
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  194 ttttcgtcctacc 206  Q
    |||||||||||||    
T  6019210 ttttcgtcctacc 6019198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 24332107 - 24331988
Alignment:
Q  91 cttaattacactttt-ggtcatcgtgttttggcctacttacgaaactggtcatgccctttt-aaaacagaacaaaatggtccttcaattatcat-ttttg 187  Q
    ||||||||||||||| ||||||| ||||||||| |||| ||||||||| || |||| |||| |||||||||||||| |||||| |||||||||| |||||    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  188 tcgca-tttttcgtcctacc 206  Q
    | ||| ||||||||||||||    
T  24332007 ttgcattttttcgtcctacc 24331988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 206
Target Start/End: Complemental strand, 4624757 - 4624653
Alignment:
Q  102 ttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtc 201  Q
    |||| ||| |||||||||  |||||| |||||| |||||||| |  ||||||||| |||||||   || |||||||||||||| ||| ||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  202 ctacc 206  Q
    |||||    
T  4624657 ctacc 4624653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 14462686 - 14462721
Alignment:
Q  171 ttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    |||||||||||||||||| |||||||||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacc 14462721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 5e-52; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 22374318 - 22374437
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  22374418 gttgcatttttcgtcctacc 22374437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 40027139 - 40027257
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||| ||||||||    
T  40027239 ttgcattttttgtcctacc 40027257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 22374873 - 22374753
Alignment:
Q  86 gtaggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  22374873 gtaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttt 22374774  T
Q  186 tgtcgcatttttcgtcctacc 206  Q
    ||| |||||||||||||||||    
T  22374773 tgttgcatttttcgtcctacc 22374753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 239351 - 239469
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||    
T  239351 taggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 239449  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  239450 gttgcatttttcgtcctacc 239469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 18451378 - 18451259
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  18451378 taggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcattttt 18451279  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || ||||||||| |||||||    
T  18451278 gttgcatttttcttcctacc 18451259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 26538626 - 26538507
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  26538626 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcattttt 26538527  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  26538526 gttgcatttttcgtcctacc 26538507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 11091067 - 11090950
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  187 gtcgcatttttcgtccta 204  Q
    || | |||||||||||||    
T  11090967 gttgtatttttcgtccta 11090950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 28616613 - 28616730
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  189 cgcatttttcgtcctacc 206  Q
     ||| |||||||||||||    
T  28616713 tgcaattttcgtcctacc 28616730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 11090519 - 11090638
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  11090619 gttgcatttttcgtcctacc 11090638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 40815892 - 40815773
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  40815892 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcattttt 40815793  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  40815792 gttgcatttttcgtcctacc 40815773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 28617160 - 28617042
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||  || |||||||||||||||||||||||||||||||||||||||||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||| ||||    
T  28617060 ttgcatttttcgtcttacc 28617042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 40815347 - 40815462
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||| |    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  40815447 catttttcgtcctacc 40815462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 43058879 - 43058761
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||    
T  43058879 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-tttt 43058781  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  43058780 gttgcatttttcgtcctacc 43058761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 18450829 - 18450947
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||     
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||| ||||||||    
T  18450929 ttgcatttttagtcctacc 18450947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 20444748 - 20444866
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | ||| |||||||||||||    
T  20444848 ttgcagttttcgtcctacc 20444866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 26538096 - 26538214
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||||||||  ||||||||||||||||||||||  ||||||||||||||||||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  26538196 ttgcatttttcgtcctacc 26538214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 40027682 - 40027568
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  40027582 atttttcgtcctacc 40027568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 239896 - 239780
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  190 gcatttttcgtcctacc 206  Q
    || ||||||||| ||||    
T  239796 gcgtttttcgtcatacc 239780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 1978106 - 1978222
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||| |||||||| | ||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  187 gtcgcatttttcgtcct 203  Q
    || |||||||| |||||    
T  1978206 gttgcattttttgtcct 1978222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 1978656 - 1978537
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| | ||||||||||||||| |||||| ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||| ||||||||    
T  1978556 gttgcattttttgtcctacc 1978537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 7446893 - 7446774
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||| ||||| || |||||||||| | |||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  7446893 taggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 7446794  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  7446793 gttgcatttttcgtcctacc 7446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 28847242 - 28847123
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||| |||||||| ||||||||||| ||||| |||||||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  28847142 gttgcatttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 35781207 - 35781093
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    ||||||||||||||||| || ||||||||||||||||| |||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||     
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  190 gcatttttcgtccta 204  Q
    |||||||||||||||    
T  35781107 gcatttttcgtccta 35781093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 20440578 - 20440461
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||||||||||||||| |||| |||| |||||||||||    
T  20440578 taggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcattttt 20440479  T
Q  187 gtcgcatttttcgtccta 204  Q
    || ||| |||||||||||    
T  20440478 gttgcagttttcgtccta 20440461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 95 - 206
Target Start/End: Original strand, 3025472 - 3025583
Alignment:
Q  95 attacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatt 194  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 3025571  T
Q  195 tttcgtcctacc 206  Q
    ||||||||||||    
T  3025572 tttcgtcctacc 3025583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 35779708 - 35779825
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||| | |||| |||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||| ||||||||    
T  35779808 tgcattttttgtcctacc 35779825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 43058333 - 43058450
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||| || ||||||||||||| ||| || ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  189 cgcatttttcgtcctacc 206  Q
     ||||||||||| |||||    
T  43058433 tgcatttttcgttctacc 43058450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 8972239 - 8972354
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| |||||||||||| | || |||||| |||||||||||||| ||||||||||||||| ||| |||||||||||||||||| |    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  191 catttttcgtcctacc 206  Q
    |||||||||| |||||    
T  8972339 catttttcgttctacc 8972354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 14432684 - 14432569
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    |||||||||| |||||||| ||||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||||| |    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttg 14432585  T
Q  191 catttttcgtcctacc 206  Q
    |||||||| |||||||    
T  14432584 catttttcatcctacc 14432569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 14432145 - 14432259
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||| | ||||||| |||||||||| |||||||||||| ||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  192 atttttcgtcctacc 206  Q
    |||||| ||||||||    
T  14432245 atttttggtcctacc 14432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 7446341 - 7446459
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    ||||||||||||||||||| || ||||||||||| ||||| | |||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||||     
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||| ||||    
T  7446441 ttgcatttttcgtcatacc 7446459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 15551501 - 15551612
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| |||||||||||  |||| |||||| |||||||||| |||||||||| |||||||  |||||||| ||||||||||||| |    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  191 catttttcgtcc 202  Q
    ||||||||||||    
T  15551601 catttttcgtcc 15551612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 15552596 - 15552482
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    |||||||||||||||||||||  |||||||||||||| |||||| || ||  ||||||||||||||||||||||| ||| |||||||||||||||||| |    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  191 catttttcgtcctacc 206  Q
     |||||||||||||||    
T  15552497 tatttttcgtcctacc 15552482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 8425358 - 8425471
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| | ||||||||||||||| |||||| ||||| | || |||||||||||||||||| ||| ||||||||||||||| ||| ||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttgc 8425456  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  8425457 atttttcgtcctacc 8425471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 8425902 - 8425788
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||  | ||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||  |||||||||||||||||||||| ||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||| ||||    
T  8425802 atttttcgtcttacc 8425788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 3026006 - 3025891
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||| |||||||| |||||||||||| |||| |||||| ||||  ||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  3025908 tgcatttttcgtcctacc 3025891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 3824251 - 3824179
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaa 164  Q
    ||||||| ||||||||||||||  ||||  || ||| |||||| ||||||||||||||| |||  ||||||||    
T  3824251 ttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaa 3824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 50970824 - 50970706
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  50970724 ttgcatttttcgtcctacc 50970706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 15646190 - 15646309
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  15646290 gttgcatttttcgtcctacc 15646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 17433758 - 17433643
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  17433658 catttttcgtcctacc 17433643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 18984117 - 18984236
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  18984217 gttgcatttttcgtcctacc 18984236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 39154566 - 39154448
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  39154466 ttgcatttttcgtcctacc 39154448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 29306953 - 29307070
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  29307053 tgcatttttcgtcctacc 29307070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 8678542 - 8678658
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||     
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||||||||||||    
T  8678642 gcatttttcgtcctacc 8678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 15173640 - 15173522
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  15173541 gttgcatttttcgtcctacc 15173522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 33144462 - 33144347
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| |    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  33144362 catttttcgtcctacc 33144347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 50970276 - 50970395
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  50970376 gttgcatttttcgtcctacc 50970395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 5540364 - 5540246
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||| || ||||||||||||||| |||| ||||||||||||||||||||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  5540264 ttgcatttttcgtcctacc 5540246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 15646741 - 15646623
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| || | ||||||||||||||||||||| ||||||||||||||||||||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  15646641 ttgcatttttcgtcctacc 15646623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 18984665 - 18984547
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984566  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  18984565 ttgcatttttcgtcctacc 18984547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 8679086 - 8678969
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  8678986 tgcatttttcgtcctacc 8678969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 26859059 - 26859176
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  26859159 tgcatttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 29307487 - 29307370
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||| ||||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  29307387 tgcatttttcgtcctacc 29307370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 29869619 - 29869736
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  188 tcgcatttttcgtcctac 205  Q
    | ||||||||||||||||    
T  29869719 ttgcatttttcgtcctac 29869736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 29870164 - 29870047
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  29870064 tgcatttttcgtcctacc 29870047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 5539817 - 5539933
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||     
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  190 gcatttttcgtcctacc 206  Q
    | |||||||||||||||    
T  5539917 gtatttttcgtcctacc 5539933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 9018971 - 9019090
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||| |||| ||||| ||||||||||    
T  9018971 taggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcattttt 9019070  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  9019071 gttgcatttttcgtcctacc 9019090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 39154021 - 39154136
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    |||||||||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||| |    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  39154121 catttttcgtcctacc 39154136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 4636515 - 4636403
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||||| | |||||||||||||||||||||     
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  190 gcatttttcgtcc 202  Q
    |||||||||||||    
T  4636415 gcatttttcgtcc 4636403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 5963120 - 5963006
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||  ||| |||||||||||||||||| ||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  5963020 atttttcgtcctacc 5963006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 21856044 - 21856157
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| ||||||||||  ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  21856044 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 21856143  T
Q  191 catttttcgtccta 204  Q
    |||||||| |||||    
T  21856144 catttttcatccta 21856157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 33143925 - 33144034
Alignment:
Q  97 tacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttt 196  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  197 tcgtcctacc 206  Q
    ||||||||||    
T  33144025 tcgtcctacc 33144034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 9019510 - 9019391
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||| |||||| || ||||||||  |||| |||||||||||||||||| |||| ||||||||||||||||    
T  9019510 taggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcattttt 9019411  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  9019410 gttgcatttttcgtcctacc 9019391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 26859606 - 26859487
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||||||||| || ||||||||||| ||||| ||||||||  || ||||||||||||||||||||| | |||||||||||||||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  26859506 gttgcatttttcgtcctacc 26859487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 15173099 - 15173213
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||||  |||||||| ||| ||||||||||||||||||| ||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  15173199 atttttcgtcctacc 15173213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 17433216 - 17433333
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| || |||||||||||||| | |||||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  189 cgcatttttcgtcctacc 206  Q
     ||||||||| |||||||    
T  17433316 tgcatttttcatcctacc 17433333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 21856588 - 21856472
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||| || |||| |||||||||||||||||| |||||||||| |||||||||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  189 cgcatttttcgtcctac 205  Q
     ||||||||||||||||    
T  21856488 tgcatttttcgtcctac 21856472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 52268289 - 52268407
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||| ||||||||| || |||||| ||||| |||||||||||||||||||||||  ||| |||| ||||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | ||| |||||||||||||    
T  52268389 ttgcacttttcgtcctacc 52268407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 5962579 - 5962695
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    ||||||||||| |||||||| ||||||| ||| ||| | ||||||||||||  |||||||||||||||||||||| |||| ||||| ||||||||||||     
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  190 gcatttttcgtcctacc 206  Q
    ||||||||||| |||||    
T  5962679 gcatttttcgttctacc 5962695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 47827125 - 47827034
Alignment:
Q  97 tacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||| ||  | |||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgt 47827034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| |||||||||| | |||| | ||||  |||  |||||||||||||||||||||||  ||| |||| ||||||||||||| |    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  191 catttttcgtcctac 205  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 17112282 - 17112398
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||  || |||||||  ||||| | |||| |||| | |||||||||||| |||| ||||| |||||||||||||||||||| |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggt-aggcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  17112381 tgcatttttcgtcctacc 17112398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 2733504 - 2733416
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaa 175  Q
    |||||||||||| |||||||||| | ||||||||||||| |  ||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  2733504 taggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38505007 - 38505057
Alignment:
Q  1 taagaagaagtccacgtgagtgaccaagttgagaaagaggtggactcttac 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38505007 taagaagaagtccacgtgagtgaccaagttgagaaagaggtggactcttac 38505057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaa 164  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 4636033 - 4636089
Alignment:
Q  149 ttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    |||||||||||||||  |||||||||| |||||||||||| |||||||| || |||||    
T  4636033 ttaaaacagaacaaac-ggtccttcaagtatcatttttgttgcattttttgttctacc 4636089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 50419806 - 50419725
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtcc 170  Q
    ||||||||| |||||||||||||||  ||| | || ||| |||||| ||||| |||| ||||||||  |||||||| |||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 2227 - 2095
Alignment:
Q  74 aatatatatcccgtaggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttc 173  Q
    |||||||||  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||    
T  2227 aatatatataacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattc 2128  T
Q  174 aattatcatttttgtcgcatttttcgtcctacc 206  Q
    ||||||||||||||| |||||||||||||||||    
T  2127 aattatcatttttgttgcatttttcgtcctacc 2095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 1665 - 1784
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| || |||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  1765 gttgcatttttcgtcctacc 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 3e-50; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 35288903 - 35289019
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  189 cgcatttttcgtcctac 205  Q
     ||||||||||||||||    
T  35289003 tgcatttttcgtcctac 35289019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 37786766 - 37786884
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  37786866 ttgcatttttcgtcctacc 37786884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 19591072 - 19590953
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  19591072 taggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19590973  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  19590972 gttgcatttttcgtcctacc 19590953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 19830418 - 19830537
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  19830518 gttgcatttttcgtcctacc 19830537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 19590525 - 19590642
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  189 cgcatttttcgtcctacc 206  Q
     ||||||||| |||||||    
T  19590625 tgcatttttcatcctacc 19590642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 2658837 - 2658956
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||| ||||    
T  2658937 gttgcatttttcgtcatacc 2658956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 32004612 - 32004731
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| || || |||||||||||||||||||||||||||||||||||||||||||||    
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||| ||||||    
T  32004712 gttgcatttttcgccctacc 32004731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 34533789 - 34533908
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || ||||||| |||||||||    
T  34533889 gttgcattttccgtcctacc 34533908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 38859188 - 38859069
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  38859188 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattttt 38859089  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  38859088 gttgcatttttcgtcctacc 38859069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 35289448 - 35289329
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||| ||||    
T  35289348 gttgcatttttcgtcatacc 35289329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 23952728 - 23952848
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcc-tacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttt 185  Q
    ||||||||||||||||||||||| |||||||||| || |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23952728 taggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23952827  T
Q  186 tgtcgcatttttcgtcctacc 206  Q
     || |||||||||||||||||    
T  23952828 ggttgcatttttcgtcctacc 23952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 32005159 - 32005043
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  189 cgcatttttcgtcctac 205  Q
     ||||||||||||||||    
T  32005059 tgcatttttcgtcctac 32005043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 34534339 - 34534219
Alignment:
Q  86 gtaggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttt 185  Q
    ||||||||||||| |||||||||  ||||||||||||||||| ||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||||    
T  34534339 gtaggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttt 34534240  T
Q  186 tgtcgcatttttcgtcctacc 206  Q
    ||| |||||||||||||||||    
T  34534239 tgttgcatttttcgtcctacc 34534219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 37787314 - 37787195
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||| |||||||||| ||||||||||||||||| |||||||||||| ||| |||||||| |||||||||| ||| |||||||||||||||||    
T  37787314 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcattttt 37787215  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  37787214 gttgcatttttcgtcctacc 37787195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 29099863 - 29099967
Alignment:
Q  102 ttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtc 201  Q
    |||||||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  202 ctacc 206  Q
    |||||    
T  29099963 ctacc 29099967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 38160949 - 38161067
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||| |  || |||||||||||||||||||||||| ||||||||||||| ||||||    
T  38160949 taggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattattttt 38161048  T
Q  187 gtcgcatttttcgtcctac 205  Q
    || ||||||||||||||||    
T  38161049 gttgcatttttcgtcctac 38161067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 38858642 - 38858760
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    ||||||||| |||||||||||| |||||||||||| |||| |||||||||||| ||| ||||||||||||||||||| |||| |||||||||||||||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||| ||||||||    
T  38858742 ttgcatttttggtcctacc 38858760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 2659387 - 2659268
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||| |||||||| ||| ||||||||||| | | |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  2659387 taggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcattttt 2659288  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || ||||||||| |||||||    
T  2659287 gttgcatttttcatcctacc 2659268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 4478247 - 4478133
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||| |||||||||| || ||||||||||||||||| |||||||||||| |||||||||||||||||| || || ||||||||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  187 gtcgcatttttcgtc 201  Q
    || ||||||||||||    
T  4478147 gttgcatttttcgtc 4478133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 4641443 - 4641557
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| |||||||||||| |||| |||||||||||| ||| ||||| ||||| ||||||| |||| |||||||||||||||||| ||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  4641543 atttttcgtcctacc 4641557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 19830965 - 19830848
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| || ||||||||| || |||||||||||| ||||||| ||| ||||||||||||||||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||| ||||||||    
T  19830865 ttgcattttt-gtcctacc 19830848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 29100393 - 29100279
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||| ||||| || ||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  192 atttttcgtcctacc 206  Q
    |||||| ||||||||    
T  29100293 attttttgtcctacc 29100279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 28584466 - 28584350
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    |||||||||||||||| ||| ||||| ||||||||| | |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||     
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  190 gcatttttcgtcctacc 206  Q
    | |||||||||| ||||    
T  28584366 gtatttttcgtcttacc 28584350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 4641983 - 4641873
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||||||||| ||   ||||||| || |||||||||||||||||||| ||||||||||||||||||||||| ||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  192 atttttcgtcctac 205  Q
    || |||||||||||    
T  4641886 atatttcgtcctac 4641873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 95 - 206
Target Start/End: Complemental strand, 23953268 - 23953157
Alignment:
Q  95 attacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatt 194  Q
    |||||| |||||||| ||||||||||  ||||| ||||||||||||  ||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  195 tttcgtcctacc 206  Q
    ||||||| ||||    
T  23953168 tttcgtcatacc 23953157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 28583437 - 28583556
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| | || | ||||  ||||||||||||||| || ||||  ||||||||||||||||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  187 gtcgcatttttcgtcctacc 206  Q
     | |||||||||||||||||    
T  28583537 attgcatttttcgtcctacc 28583556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 3e-50; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 20471071 - 20470939
Alignment:
Q  74 aatatatatcccgtaggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttc 173  Q
    |||||||||  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||    
T  20471071 aatatatataacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattc 20470972  T
Q  174 aattatcatttttgtcgcatttttcgtcctacc 206  Q
    ||||||||||||||| |||||||||||||||||    
T  20470971 aattatcatttttgttgcatttttcgtcctacc 20470939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 23494990 - 23494872
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  23494990 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23494891  T
Q  187 gtcgcatttttcgtcctac 205  Q
    || ||||||||||||||||    
T  23494890 gttgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 45082969 - 45082852
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  45082869 tgcatttttcgtcctacc 45082852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 25447783 - 25447664
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  25447683 gttgcatttttcgtcctacc 25447664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 15523780 - 15523662
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  15523680 ttgcatttttcgtcctacc 15523662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 12234874 - 12234757
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  12234774 tgcatttttcgtcctacc 12234757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 25447247 - 25447364
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  25447347 tgcatttttcgtcctacc 25447364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 46193405 - 46193522
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  46193505 tgcatttttcgtcctacc 46193522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 15523233 - 15523352
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  187 gtcgcatttttcgtcctacc 206  Q
     | |||||||||||||||||    
T  15523333 tttgcatttttcgtcctacc 15523352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 11153692 - 11153575
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  11153592 tgcatttttcgtcctacc 11153575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 22434179 - 22434296
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  189 cgcatttttcgtcctacc 206  Q
     | |||||||||||||||    
T  22434279 tgtatttttcgtcctacc 22434296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 91 - 203
Target Start/End: Complemental strand, 18764063 - 18763951
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||| |    
T  18764063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttg 18763964  T
Q  191 catttttcgtcct 203  Q
    |||||||||||||    
T  18763963 catttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 4220106 - 4219987
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||    
T  4220106 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcattttt 4220007  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  4220006 gttgcatttttcgtcctacc 4219987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 46193948 - 46193833
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| | |    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  46193848 catttttcgtcctacc 46193833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 25937668 - 25937784
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||| |||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  25937668 taggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 25937767  T
Q  187 gtcgcatttttcgtcct 203  Q
    || |||||||| |||||    
T  25937768 gttgcattttttgtcct 25937784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 2118295 - 2118410
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||| |||||||| |||||||||||||||||||||| |    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  2118395 catttttcgtcctacc 2118410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 12234327 - 12234446
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| || ||||||||| || | |||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  12234327 taggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 12234426  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  12234427 gttgcatttttcgtcctacc 12234446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 33109686 - 33109801
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    |||||||||| |||||||| |||||||||||| |||| |||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| |    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  33109786 catttttcgtcctacc 33109801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 33110011 - 33109892
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| || ||||||||||| || |||||| ||||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  33109911 gttgcatttttcgtcctacc 33109892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 54995067 - 54995186
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| |||||| |||||||||| |||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  54995167 gttgcatttttcgtcctacc 54995186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 11153145 - 11153263
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    ||||||||||| |||||||||| ||||||||||||||||| || ||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  11153245 ttgcatttttcgtcctacc 11153263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 18751602 - 18751712
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  192 atttttcgtcc 202  Q
    |||||||||||    
T  18751702 atttttcgtcc 18751712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 25938217 - 25938099
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||| ||||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||| ||||||||    
T  25938117 ttgcattttttgtcctacc 25938099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 48526723 - 48526609
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    ||||||| |||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||| ||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  48526623 atttttcgtcctacc 48526609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 23494445 - 23494560
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||| | |    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  23494545 catttttcgtcctacc 23494560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 38962362 - 38962247
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    |||||||||| |||||||| ||||||||||| ||| | ||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||| |    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  38962262 catttttcgtcctacc 38962247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 48526195 - 48526313
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||  |||||||||| |||||| | ||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  48526295 ttgcatttttcgtcctacc 48526313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 86 - 204
Target Start/End: Complemental strand, 54995615 - 54995498
Alignment:
Q  86 gtaggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttt 185  Q
    ||||| |||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||| ||||| |||    
T  54995615 gtaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttt 54995517  T
Q  186 tgtcgcatttttcgtccta 204  Q
    ||| |||||||||||||||    
T  54995516 tgttgcatttttcgtccta 54995498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 4219559 - 4219674
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||||| |||| |||||||| | |||||||  |||||||||||||||||||||| |    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  4219659 catttttcgtcctacc 4219674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 22434723 - 22434605
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| ||||||||| |||||||| ||||||||||||||||| |||||||||||| |||| ||||||| |||||||||| |||| ||||||||||||||||    
T  22434723 taggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcattttt 22434625  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  22434624 gttgcatttttcgtcctacc 22434605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 45082430 - 45082548
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||||||| ||||||||||||||||||||| ||||| ||||| |||||  ||||||||||||| ||||||||| |||||||||||||||||||||    
T  45082430 taggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcattttt 45082528  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  45082529 gttgcatttttcgtcctacc 45082548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 51021342 - 51021224
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||| ||||| ||||||||||||||| ||||||| ||||||| |||||||| ||||    
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-tttt 51021244  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  51021243 gttgcatttttcgtcctacc 51021224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 43243803 - 43243708
Alignment:
Q  111 tcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||| ||||||||    
T  43243803 tcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 51020795 - 51020914
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||||||||| || || |||||||||  | | || ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||    
T  51020795 taggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcattttt 51020894  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  51020895 gttgcatttttcgtcctacc 51020914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 2118837 - 2118723
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| |||||||||||||| || | |||||||||| |  |||||||||||| ||||||| |||| |||||||||||||||||| ||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  2118737 atttttcgtcctacc 2118723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 22170482 - 22170365
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||| || || |||| |||||||||| ||||||| |||| |||||||||||||||||    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  22170383 ttgcatttttcgtcctacc 22170365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 20958403 - 20958288
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    |||||||||||||||| ||| |||| |||||||||||| |||||| ||||| ||||||||||||||||||||||   ||||||||||||||||||||||     
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||| ||||||||    
T  20958303 gcattttt-gtcctacc 20958288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 87 - 203
Target Start/End: Complemental strand, 48713893 - 48713777
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| ||||||||||||||  |  ||||||||| ||||||| | |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  187 gtcgcatttttcgtcct 203  Q
    || ||||||||||||||    
T  48713793 gttgcatttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgccctttt-aaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||||||  ||| ||||| |||| | ||||||| |||| |||||||||||||||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | ||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 48295088 - 48294970
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||| |||||||||||||||||||  ||||| |||||| ||||| ||||  ||||||||| |||||||| ||| ||||||||||||||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  189 cgcattttt-cgtcctacc 206  Q
     |||||||| |||||||||    
T  48294988 tgcatttttccgtcctacc 48294970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 12503453 - 12503553
Alignment:
Q  106 ggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctac 205  Q
    |||| |||||||||| | |||| ||||||||| ||  ||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  206 c 206  Q
    |    
T  12503553 c 12503553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 48293592 - 48293708
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||| || || || |  ||||||||| |||||||| || |||||||||||||||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  187 gtcgcatttttcgtcct 203  Q
    || ||||||||| ||||    
T  48293692 gttgcatttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 43281313 - 43281219
Alignment:
Q  111 tcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||||||  || |||||||||| |||||||| |||||||||||||||||    
T  43281313 tcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 10258433 - 10258315
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||| ||||||||| | |||| ||||| |||||||||||||||||  ||||| ||  |||||||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | ||| |||| ||| ||||    
T  10258333 ttgcagttttagtcttacc 10258315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 16690939 - 16691053
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    ||||||||| |||||||| | ||||||||  ||||| |||||| ||||| ||||  ||||||||| ||||||||  ||||||||||||||||||||| ||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  16691039 atttttcgtcctacc 16691053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 20957196 - 20957301
Alignment:
Q  96 ttacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcattt 195  Q
    ||||| |||||||| ||| |||||||| |||| |||||| ||||||| | ||||||||||| |||||||| ||||||||||||||| |||||| ||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  196 ttcgtc 201  Q
    ||||||    
T  20957296 ttcgtc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 44892692 - 44892576
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    ||||||||| | |||||||| |||||||||| |||||| |||||| ||||  |||| ||||||||||||||||||  ||| |||||||||  |||||||     
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||||||||||||    
T  44892592 gcatttttcgtcctacc 44892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 48708293 - 48708401
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||||||||||||   |||||||||||||   |||||| || || ||||||||||||||| |||||||  ||||||||||||||||||||    
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  187 gtcgcattt 195  Q
    || ||||||    
T  48708393 gttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 44890518 - 44890626
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    ||||||||||| |||||||| | |||||||| |||| | |||||| |||||||||||||||||||||||||||||   ||||| ||||||  |||||||     
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  190 gcatttttc 198  Q
    |||||||||    
T  44890618 gcatttttc 44890626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaa 159  Q
    |||||||||||||||||||||| ||||||||||||||||| || |||||| || ||||||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 16691616 - 16691500
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||| ||   |||||||| |||||| |||||| ||||| ||||  |||||| || |||||||| |||||| |||||| ||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgt 16691518  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||| ||||    
T  16691517 tgcatttttcgtcatacc 16691500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 43242328 - 43242387
Alignment:
Q  147 ttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    |||||||||||||||||| |||| |||||||||||||||| | |||||||||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacc 43242387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 55189528 - 55189626
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||| | ||||| || |||||||||| |||| | |  ||| |||| |||||||||||||| |||||||||| ||| |||||||||||||||||    
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttg 55189626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 44220861 - 44220805
Alignment:
Q  150 taaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    |||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacc 44220805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 12503913 - 12503864
Alignment:
Q  157 gaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    |||||||| |||||||||| |||||||||||| |||||||||||| ||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcatacc 12503864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 41681132 - 41681251
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  41681232 gttgcatttttcgtcctacc 41681251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 13225185 - 13225067
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  13225085 ttgcatttttcgtcctacc 13225067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 11656453 - 11656572
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  11656453 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccattttt 11656552  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  11656553 gttgcatttttcgtcctacc 11656572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 19176837 - 19176718
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  19176837 taggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19176738  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  19176737 gttgcatttttcgtcctacc 19176718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 34541095 - 34540976
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  34541095 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattttt 34540996  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  34540995 gttgcatttttcgtcctacc 34540976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 11657003 - 11656885
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  11656903 ttgcatttttcgtcctacc 11656885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 19176288 - 19176403
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  19176288 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19176387  T
Q  187 gtcgcatttttcgtcc 202  Q
    || |||||||||||||    
T  19176388 gttgcatttttcgtcc 19176403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 9930203 - 9930085
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||| |||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  9930103 ttgcatttttcgtcctacc 9930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 33328161 - 33328275
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||| ||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  33328261 atttttcgtcctacc 33328275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 41681679 - 41681562
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  41681579 tgcatttttcgtcctacc 41681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 9928912 - 9929026
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||  ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  9929012 atttttcgtcctacc 9929026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 12572393 - 12572279
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  12572293 atttttcgtcctacc 12572279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 44831246 - 44831364
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| || |||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  44831346 ttgcatttttcgtcctacc 44831364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 12571861 - 12571978
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||  | ||||||||||||||||||||| |||| ||||||||||||||||    
T  12571861 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcattttt 12571960  T
Q  187 gtcgcatttttcgtccta 204  Q
    || |||||||||||||||    
T  12571961 gttgcatttttcgtccta 12571978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 31133764 - 31133648
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||     
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||||||| ||||    
T  31133664 gcatttttcgtcatacc 31133648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 9178180 - 9178071
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  189 cgcatttttc 198  Q
     |||||||||    
T  9178080 tgcatttttc 9178071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 31133218 - 31133337
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||||||||||  |||||||||||||| |||||||  ||||||||| ||||||||||    
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcattttt 31133317  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  31133318 gttgcatttttcgtcctacc 31133337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 33742920 - 33743038
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||    
T  33742920 taggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcattttt 33743018  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    |  |||||||||||||||||    
T  33743019 gatgcatttttcgtcctacc 33743038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 13224645 - 13224757
Alignment:
Q  93 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgca 192  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||| | |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  193 tttttcgtcctacc 206  Q
    ||||||||||||||    
T  13224744 tttttcgtcctacc 13224757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 33328683 - 33328572
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    |||||||| |||||||||| ||||||||| ||||||| |||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||| |    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  191 catttttcgtcc 202  Q
    ||||||||||||    
T  33328583 catttttcgtcc 33328572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 44831792 - 44831673
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||| |||||||||||| |||||||||||| |||| |||||||||||| ||| ||||||||||||||||||| |||  ||||||||||||||||    
T  44831792 taggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcattttt 44831693  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||| ||||||||    
T  44831692 gttgcatttttggtcctacc 44831673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 11337070 - 11336959
Alignment:
Q  86 gtaggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |||||||||||| |||| |||||| |||||  ||||||||||||||||| |||| |||| |||||||||||||||    
T  11337070 gtaggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttt 11336971  T
Q  186 tgtcgcattttt 197  Q
    ||| ||||||||    
T  11336970 tgttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 4629794 - 4629914
Alignment:
Q  86 gtaggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttt 185  Q
    |||||||||||| |||||||  |  |||||||||||| || | |||||||||||| ||||||||||||| ||||||||| |||| |||||||||||||||    
T  4629794 gtaggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcatttt 4629893  T
Q  186 tgtcgcatttttcgtcctacc 206  Q
    | | |||||||||||| ||||    
T  4629894 tattgcatttttcgtcttacc 4629914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 8074097 - 8074000
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttt 185  Q
    ||||||| ||| |||||||||| ||||||||||||||| | |||||| || ||||| |||||||||||||||||||||  ||||||||||||||||||    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatcatttt 8074000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 4630328 - 4630241
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattat 179  Q
    ||||||||||||||| |||||||||||||| ||||| |||||| ||||| |||  ||||||||||||| | || ||||||||||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat 4630241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 10918124 - 10918235
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| ||||||||| |||| ||| ||||||||||  ||||| |||||| ||||| ||||   |||||||||| |||||| ||||||||| ||||||||||    
T  10918124 taggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcattttt 10918223  T
Q  187 gtcgcatttttc 198  Q
    || |||||||||    
T  10918224 gttgcatttttc 10918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 33743411 - 33743347
Alignment:
Q  142 tgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    |||| |||||||||||||||||| |||  |||||||||||||||||| |||||||||||||||||    
T  33743411 tgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctacc 33743347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 43958264 - 43958302
Alignment:
Q  168 tccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctacc 43958302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggc 122  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 2319670 - 2319789
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2319670 taggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2319769  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  2319770 gttgcatttttcgtcctacc 2319789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 12935155 - 12935274
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  12935155 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 12935254  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  12935255 gttgcatttttcgtcctacc 12935274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 20741098 - 20741217
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  20741198 gttgcatttttcgtcctacc 20741217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 23075675 - 23075556
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || ||||||||||| |||||    
T  23075575 gttgcatttttcgttctacc 23075556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 10899942 - 10900056
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  10900042 atttttcgtcctacc 10900056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 10900475 - 10900358
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  10900375 tgcatttttcgtcctacc 10900358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 11445534 - 11445415
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||    
T  11445534 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattttt 11445435  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  11445434 gttgcatttttcgtcctacc 11445415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 22219900 - 22219781
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  22219900 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22219801  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || ||||||||||| |||||    
T  22219800 gttgcatttttcgttctacc 22219781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 15828187 - 15828069
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  15828087 ttgcatttttcgtcctacc 15828069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 11444985 - 11445104
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  11444985 taggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcattttt 11445084  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  11445085 gttgcatttttcgtcctacc 11445104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 18257135 - 18257254
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||| ||||    
T  18257235 gttgcatttttcgtcatacc 18257254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 11277127 - 11277010
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  11277027 tgcatttttcgtcctacc 11277010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 28472635 - 28472754
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||| ||| |||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||||    
T  28472635 taggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattttt 28472734  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  28472735 gttgcatttttcgtcctacc 28472754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 29859824 - 29859943
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||| ||| |||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||||    
T  29859824 taggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcattttt 29859923  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  29859924 gttgcatttttcgtcctacc 29859943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 1149977 - 1149860
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||| ||||||| | |||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  1149877 tgcatttttcgtcctacc 1149860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 31470860 - 31470744
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    |||||||||||||||||||| | ||||||| ||||||| |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||     
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||||||||||||    
T  31470760 gcatttttcgtcctacc 31470744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 12935704 - 12935585
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||| || ||||||||||||||| |||||||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    ||  ||||||||||||||||    
T  12935604 gttacatttttcgtcctacc 12935585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 2322760 - 2322646
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||| ||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  2322660 atttttcgtcctacc 2322646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 18504922 - 18505036
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||||||||| ||| |||||||||||||||||||  |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  18505022 atttttcgtcctacc 18505036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 31470314 - 31470432
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| |||||||||||||||||||  ||| ||||||||| |||||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  31470414 ttgcatttttcgtcctacc 31470432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 18257682 - 18257565
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||| |||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  189 cgcatttttcgtcctacc 206  Q
      ||||||||||||||||    
T  18257582 tacatttttcgtcctacc 18257565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 23073998 - 23074096
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 18505463 - 18505347
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    ||||||||| |||||||||| ||||||||||| ||||| ||||||||| || ||||||||||||||| |||||||  ||||||||||||||||||||||     
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||||||||||||    
T  18505363 gcatttttcgtcctacc 18505347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 20741650 - 20741529
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    ||||||||||||||| |||||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||     
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  188 tc---gcatttttcgtcctacc 206  Q
    |    |||||||||||||||||    
T  20741550 tttttgcatttttcgtcctacc 20741529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaatt 177  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 29035180 - 29035069
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||| ||| ||||||||| ||||||| |||||| |||| ||||||||||||||||||||||||| |||||| | ||||||||||||| |    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  191 catttttcgtcc 202  Q
    ||||||||||||    
T  29035080 catttttcgtcc 29035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 4811372 - 4811489
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||||||   || |||||| ||||| |||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  189 cgcatttttcgtcctacc 206  Q
      ||||||||||| ||||    
T  4811472 ttcatttttcgtcttacc 4811489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 4811801 - 4811692
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||| ||||||| || ||||||||||||||||| | ||||||| ||||||  |||||||||||||||||| |||||||||||||||||||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  189 cgcatttttc 198  Q
     |||||||||    
T  4811701 tgcatttttc 4811692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 15827639 - 15827757
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaa--atggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||||||  || |||||||||||| ||||||  | |||||||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  15827739 ttgcatttttcgtcctacc 15827757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 3835268 - 3835154
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    ||||||||||||||||||   |||||||| |||||| |||||| ||||| ||||  |||||||||||||||||| |||||| ||||||||||||||| ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  3835168 atttttcgtcctacc 3835154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 11276589 - 11276707
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||| ||| |||  |||||||||| ||||| | ||||||| || | |||||||||||||||||||||||||||||||||| |||||||||    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  188 tcgcatttttcgtcctacc 206  Q
    |  ||||||||||||||||    
T  11276689 tttcatttttcgtcctacc 11276707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 29033436 - 29033551
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| |||| ||||||||| || |||||| ||||| |||||||||||||||||||||||  |||||||| ||||||||||||| |    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  191 catttttcgtcctacc 206  Q
    ||  |||| |||||||    
T  29033536 cacatttcatcctacc 29033551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 18296143 - 18296262
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||| | |||| ||| |||||||||| | |||| || ||| || |  |||||||||||||||||||||||  |||||||| |||||||||||    
T  18296143 taggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcattttt 18296242  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  18296243 gttgcatttttcgtcctacc 18296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcc 145  Q
    ||||||||||||||||||||| |||| ||||| || ||| |||||| ||||| ||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 5e-49; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 41046703 - 41046817
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  41046803 atttttcgtcctacc 41046817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 39556122 - 39556005
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  39556022 tgcatttttcgtcctacc 39556005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 4275911 - 4275792
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  4275811 gttgcatttttcgtcctacc 4275792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 17464489 - 17464608
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17464489 taggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 17464588  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  17464589 gttgcatttttcgtcctacc 17464608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 31779199 - 31779084
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  187 gtcgcatttttcgtcc 202  Q
    || |||||||||||||    
T  31779099 gttgcatttttcgtcc 31779084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 48452987 - 48453106
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||    
T  48452987 taggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcattttt 48453086  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  48453087 gttgcatttttcgtcctacc 48453106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 30098309 - 30098191
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  30098209 ttgcatttttcgtcctacc 30098191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 39555577 - 39555695
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | ||||||||||| |||||    
T  39555677 ttgcatttttcgttctacc 39555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 5136978 - 5137097
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  5137078 gttgcatttttcgtcctacc 5137097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 20840558 - 20840677
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||||    
T  20840558 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcattttt 20840657  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  20840658 gttgcatttttcgtcctacc 20840677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 43973987 - 43973868
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||| |||| ||||||||||||||||    
T  43973987 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 43973888  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  43973887 gttgcatttttcgtcctacc 43973868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 20841107 - 20840989
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  20841007 ttgcatttttcgtcctacc 20840989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 25853234 - 25853351
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  189 cgcatttttcgtcctacc 206  Q
     ||||||||||| |||||    
T  25853334 tgcatttttcgttctacc 25853351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 37727475 - 37727358
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  37727375 tgcatttttcgtcctacc 37727358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 27393660 - 27393778
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||| |||||| || ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  27393760 ttgcatttttcgtcctacc 27393778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 37726928 - 37727046
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  37727028 ttgcatttttcgtcctacc 37727046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 5137528 - 5137411
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||    
T  5137528 taggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 5137429  T
Q  187 gtcgcatttttcgtccta 204  Q
    || |||||||| ||||||    
T  5137428 gttgcatttttagtccta 5137411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 29801356 - 29801473
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||||||||||||||||||| |||| || ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||| ||||    
T  29801456 tgcatttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 43973441 - 43973558
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||| || | |||||||||||||||||||||||| |||||||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  43973541 tgcatttttcgtcctacc 43973558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 22424812 - 22424931
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||  ||||||||  |||||||||||||||||||  || |||||||||||||||||||| |||||||||||||||||||||    
T  22424812 taggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcattttt 22424911  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  22424912 gttgcatttttcgtcctacc 22424931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 29801963 - 29801848
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||||||||||| || |||| |||||||||||| |||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  29801963 taggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 29801864  T
Q  187 gtcgcatttttcgtcc 202  Q
    || |||||||||||||    
T  29801863 gttgcatttttcgtcc 29801848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 23644461 - 23644579
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||| |||||||||||| |||||| ||||| |||| ||||||||||||||||||  |||||||||||||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  23644561 ttgcatttttcgtcctacc 23644579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 31778652 - 31778770
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||| ||||| | |||||||||| ||||||||||||||||||||||| ||||||||  ||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||||||||    
T  31778752 ttgcatttttcgtcctacc 31778770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 32534962 - 32535076
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| |||||||||||| |||| |||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||| ||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  32535062 atttttcgtcctacc 32535076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 32535508 - 32535386
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatc-----att 183  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||     |||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  184 tttgtcgcatttttcgtcctacc 206  Q
    ||||| |||||||||||||||||    
T  32535408 tttgttgcatttttcgtcctacc 32535386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 22425354 - 22425241
Alignment:
Q  93 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgca 192  Q
    ||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  193 tttttcgtcctacc 206  Q
    ||||||||||||||    
T  22425254 tttttcgtcctacc 22425241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 24301103 - 24300984
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| |||| |||||||||| ||||||| |||||||| | ||||||||||    
T  24301103 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcattttt 24301004  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  24301003 gttgcatttttcgtcctacc 24300984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 25853770 - 25853655
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    |||||||||||||||| || ||||||||||  ||||| |||||||||||| || | |||||||||||||||||||||||||||||||||||||||||| |    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  25853670 catttttcgtcctacc 25853655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 30104480 - 30104599
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||| |||||| |||||| ||||| ||||||||||||||| || | || |||||||||||||||||||||    
T  30104480 taggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcattttt 30104579  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  30104580 gttgcatttttcgtcctacc 30104599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 23228552 - 23228436
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||||||  |||||||||||||||| |||||| || ||||||||||||||||| ||||||||| |||||||||||||||||||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  23228453 tgcatttttcgtcctacc 23228436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 23645010 - 23644893
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||| ||||| | ||||||||||||||||||||| |||| ||||||||||||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  189 cgcatttttcgtcctacc 206  Q
     ||||||||| |||||||    
T  23644910 tgcatttttcatcctacc 23644893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 26837902 - 26837784
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||| ||||||||| |||| ||||| ||||||||||    
T  26837902 taggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccc-tttaaaatagaacaaaacggtcattcaagtatcattttt 26837804  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||| ||||||||    
T  26837803 gttgcattttttgtcctacc 26837784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 51474881 - 51474762
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||   ||||||||||| |||| |||||| ||||||||||||||||||||| |||||||| |||||| | |||||||||||    
T  51474881 taggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcattttt 51474782  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  51474781 gttgcatttttcgtcctacc 51474762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 27394123 - 27394005
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||  |||| |||| |||||||||||||||||| | ||||||||||||||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | ||||||| | |||||||    
T  27394023 ttgcattttccatcctacc 27394005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 32697244 - 32697128
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    ||||||||| | |||||||| ||||||||| ||||||| |||||| | |||| ||||||||||||||||||||||| || |||||||||||||||||||     
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||||||||||||    
T  32697144 gcatttttcgtcctacc 32697128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 25612519 - 25612405
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| |||||||||| |||||| |||||| ||||| ||||||||||||| |||||||||  ||| || ||||||||||||||| ||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  25612419 atttttcgtcctacc 25612405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 26274570 - 26274684
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    ||||||||| ||||| || | || |||||| ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||| ||||    
T  26274670 atttttcgtcatacc 26274684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 26837358 - 26837477
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| ||||||||| |||||||| | || |||||||||||| |||||| ||||| |||||||||| |||| ||| ||| |||||||||||||||||||||    
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  26837458 gttgcatttttcgtcctacc 26837477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 17465038 - 17464929
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    ||||||||||||| |||||||| ||||||||||||||||  | ||||||||||   ||||||||||| ||||||||| ||||||||||||||||||||||    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttg 17464939  T
Q  188 tcgcattttt 197  Q
    | ||||||||    
T  17464938 ttgcattttt 17464929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 50116954 - 50116837
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||| || |||||||||| | |||| |||||| ||||||||||||||| ||| ||||||||| |||| |||| |||||||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  189 cgcatttttcgtcctacc 206  Q
     ||| |||||||||||||    
T  50116854 tgcaattttcgtcctacc 50116837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    |||||||||||||||||||| ||||||||||| ||| | |||||| ||||| |||||||||||||||||||||||| |||||||  |||||||||||||     
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  190 gcatttttcgtcct 203  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 25420684 - 25420569
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    |||||||||||||||| ||||||| ||||| |||||| |||||| || ||| |||||||||||| |||| ||||| ||||||||||||| |||||||| |    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||| ||||    
T  25420584 catttttcgtcatacc 25420569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 37220555 - 37220674
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||| |||||||||||| || | |  | |||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || ||| |||||||||||||    
T  37220655 gttgcacttttcgtcctacc 37220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 24300560 - 24300669
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    ||||||||| |||||||| |||||||||||| || | |||||||||||| || ||||||||||||||| |||| ||| ||||||||||||||||||| ||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  192 atttttcgtcc 202  Q
    | |||||||||    
T  24300659 aattttcgtcc 24300669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 41047239 - 41047127
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    ||||||||||||| | || || |||||||||||||| |||||||||||  || ||||||||||||||| |||| | ||||||||||||||||||||| ||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgc 41047142  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  41047141 atttttcgtcctacc 41047127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 26275113 - 26274995
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||| ||||||| | |||||| | | |||||||| |||||| |||||||||||| | |||||||||||||||| |||| ||||| |||||||||||||||    
T  26275113 taggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcattttt 26275014  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || || ||||||||||||||    
T  26275013 gttgc-tttttcgtcctacc 26274995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 45965936 - 45966049
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||  |  || ||| ||||||||||| |||||||  ||||||| |||||||||| |    
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  187 gtcgcatttttcgt 200  Q
    || |||||||||||    
T  45966036 gttgcatttttcgt 45966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 37222118 - 37222041
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaa 164  Q
    ||||||||||||||||||||||| |||||||||| |||||| || ||| ||||| |||| ||||||||||||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaa 37222041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 32695706 - 32695817
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    ||||||||| |||||||| || | ||||||||||||||||||| || | ||| | ||||||||||||||||||| ||||| | ||||| |||||||| ||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  192 atttttcgtcct 203  Q
    | |||| |||||    
T  32695806 aattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 18010265 - 18010176
Alignment:
Q  114 tgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcct 203  Q
    |||||| | ||||| |||||| ||||   ||||||||||||||||||||||| ||  |||||||||||||||||| ||||||||||||||    
T  18010265 tgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 25419145 - 25419242
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtcc-ttcaattatcattttt 186  Q
    |||| |||| |||||||||| ||||||||| || |||| |||||| | ||  |||||||||||||||||||||||  |||| ||||||||||||||||    
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 23227319 - 23227370
Alignment:
Q  152 aaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcct 203  Q
    |||||||||||| | ||||| ||||| |||||||||| ||||||||||||||    
T  23227319 aaacagaacaaatttgtcctccaattttcatttttgttgcatttttcgtcct 23227370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 49407794 - 49407871
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaa 164  Q
    ||||||||||||||||||||||| |||  ||||| ||  || |||||| ||||||||||  ||| ||| |||||||||    
T  49407794 taggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaa 49407871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 11168 - 11051
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||||||||||||||||    
T  11068 tgcatttttcgtcctacc 11051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 10643 - 10738
Alignment:
Q  111 tcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| || |||||||||||||||||    
T  10643 tcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctacc 10738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 28789 - 28674
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  188 tcgcatttttcgtcct 203  Q
    | ||| ||||||||||    
T  28689 ttgcagttttcgtcct 28674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 4755 - 4635
Alignment:
Q  86 gtaggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  4755 gtaggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttt 4656  T
Q  186 tgtcgcatttttcgtcctacc 206  Q
    ||| |||||||||||||||||    
T  4655 tgttgcatttttcgtcctacc 4635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 4243 - 4320
Alignment:
Q  129 acgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  4243 acgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacc 4320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 134220 - 134101
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| | ||||||||||| |||||||    
T  134220 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacattttt 134121  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    || |||||||||||||||||    
T  134120 gttgcatttttcgtcctacc 134101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 1286 - 1169
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||| ||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  189 cgcatttttcgtcctacc 206  Q
     |||| ||||||||||||    
T  1186 tgcatctttcgtcctacc 1169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 755 - 869
Alignment:
Q  91 cttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcg 190  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| |||||||||||||||| |||||| |    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  191 catttttcgtcctacc 206  Q
    ||||||||||||||||    
T  854 catttttcgtcctacc 869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 10414 - 10300
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||  | ||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  10314 atttttcgtcctacc 10300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 9935 - 10031
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    ||||||||| |||||||| ||||||||| ||||| | ||||||||| || ||||||||||| | |||||||||||||||||||||||||| ||||||    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgt 10031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 64847 - 64735
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||||||| |||||||||||| |||| ||||||||||||  |||||||||||||||||||||| ||||||| ||||||||||||||| ||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  192 atttttcgtccta 204  Q
    |||||||||||||    
T  64747 atttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 64301 - 64419
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||| | |||| ||||||||| || || |||||||||||||||||||| ||||||||||||||||||||||    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | |||||||||||| ||||    
T  64401 ttgcatttttcgtcatacc 64419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  89 ggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 18834 - 18952
Alignment:
Q  88 aggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 187  Q
    |||||| ||||||||||||||| |  |||||||||||||| |||||||||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  188 tcgcatttttcgtcctacc 206  Q
    | ||||||||| |||||||    
T  18934 ttgcatttttcatcctacc 18952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 568 - 679
Alignment:
Q  90 gcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtc 189  Q
    ||||||||||||||||| || ||||||||||||||||| |||||| || ||||||||||||||||||||||||||  ||||||||||||||||||||||     
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  190 gcatttttcgtc 201  Q
    | ||||||||||    
T  668 gtatttttcgtc 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 454 - 565
Alignment:
Q  93 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgca 192  Q
    |||||||| |||||||| ||||||||||||||||| |||||| ||||||||  ||||||||||| |||| ||| |||||||||||||||||||||| |||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  193 tttttcgtcctac 205  Q
    |||||||||||||    
T  553 tttttcgtcctac 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 42705 - 42586
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcattttt 186  Q
    |||||||||||| |||||||| | ||||||||||| ||||| | ||||||| |  ||||||||||||||||||||||| ||||||||| |||||||||||    
T  42705 taggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcattttt 42606  T
Q  187 gtcgcatttttcgtcctacc 206  Q
    ||  ||||||||||||||||    
T  42605 gtttcatttttcgtcctacc 42586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 42172 - 42286
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    |||||||||||||| ||  ||||||||||| ||| | ||||||||| || |||| |||||||||||||||||| |||| |||||||||||||||||| ||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  192 atttttcgtcctacc 206  Q
    |||||| ||| ||||    
T  42272 attttttgtcatacc 42286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 8551 - 8455
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||| || |||||||| |||||||||||||||||| | ||||||||||||| | ||||| |||||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgt 8455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 106 - 206
Target Start/End: Complemental strand, 17024 - 16924
Alignment:
Q  106 ggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctac 205  Q
    |||| |||||||||| | |||| ||||||||| ||  ||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  206 c 206  Q
    |    
T  16924 c 16924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 16564 - 16613
Alignment:
Q  157 gaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    |||||||| |||||||||| |||||||||||| |||||||||||| ||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcatacc 16613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 55; Significance: 8e-23; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 62000 - 61886
Alignment:
Q  92 ttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgc 191  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||| | ||||||||||| ||||||||||  || ||||| ||||||||||||       
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  192 atttttcgtcctacc 206  Q
    |||||||||||||||    
T  61900 atttttcgtcctacc 61886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 61026 - 61102
Alignment:
Q  87 taggcttaattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaa 163  Q
    ||||||||| |||||||||| || ||||||||||||||||| |||||| || || |||| |||||||| ||||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

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Target: scaffold0168 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 7778 - 7716
Alignment:
Q  144 cccttttaaaacagaacaaaatggtccttcaattatcatttttgtcgcatttttcgtcctacc 206  Q
    |||||||||||||||||||||  ||| |||| ||||||||||||| |||||||||||||||||    
T  7778 cccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctacc 7716  T

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