View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11022_high_27 (Length: 255)
Name: NF11022_high_27
Description: NF11022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11022_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 31436971 - 31436748
Alignment:
| Q |
12 |
atgaaagtgccatcgtctccaatggtcatttggagaatatagaaacttaggaacaataacacatgtttcacttttgattttgagggagccatttagattt |
111 |
Q |
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| T |
31436971 |
atgaaagtgccatcgtctccaatggtcatttggagaatatagaaacttaggaacaataacacatgtttcacttttgattttgagggagccatttagattt |
31436872 |
T |
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| Q |
112 |
ctttcggaaattgaggaatactagagcagaaagagtattatgaccaagctagccaccgctctgcaagcttgaaaggcagaagtgatgagtaattccaacc |
211 |
Q |
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|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
31436871 |
ctttcggaaattgagg--taatagagcagaaagagtattatgaccaagctagccaccgctctgcaagcttgaaaggcaaaagtgatgagtaattccaacc |
31436774 |
T |
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| Q |
212 |
atatagtctaatacgcaacaataaga |
237 |
Q |
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|||||||||||||||||||||||||| |
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| T |
31436773 |
atatagtctaatacgcaacaataaga |
31436748 |
T |
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