View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11022_low_10 (Length: 453)
Name: NF11022_low_10
Description: NF11022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11022_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 18 - 440
Target Start/End: Original strand, 45706232 - 45706654
Alignment:
| Q |
18 |
catctctacttgaaaacagtaataaacaccaccattctcaaacctttgatttttgcaagttcatttagaacctcagtctcaaacacatcctttcatctat |
117 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45706232 |
catctctacttgaaaacaataataaacaccaccattctcaaacctttgatttttgcaagttcatttagaacctcagtctcaaacacatcctttcatctat |
45706331 |
T |
|
| Q |
118 |
tccattcacactaattcctaattttaaaactatagctttgtttccttcaatccatgccattgaactattaaagaaaccctcatctgttcttcataacccc |
217 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
45706332 |
tccattcacactaattcctaattttaaaactataactttgtttccttcaatccatgccattgaactattaaagaaaccctcatcagttcttcataacccc |
45706431 |
T |
|
| Q |
218 |
taaccatgagaaattctttaatgatcaagatcgttaaacaccatgccttttctatgtcacttcccccattggtaggattcttctcttccttttaatgttg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45706432 |
taaccatgagaaattctttaatgatcaagatcgttaaacaccatgccttttctatgtcacttcccccattggtaggattcttctcttccttttaatgttg |
45706531 |
T |
|
| Q |
318 |
aatcttaaatgatattttcctttttaccaaaacaatggctatcatcagtggatattttaccattcttgaggctggtagtgtacccaagaaactcgatcca |
417 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45706532 |
aatcttaaatgatattttcctttttactaaaacaatggctatcatcagtggatattttaccattcttgaggctggtagtgtacccaagaaactcgatcca |
45706631 |
T |
|
| Q |
418 |
tccaccaacacatcattttgtct |
440 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
45706632 |
tccaccaacacatcattttgtct |
45706654 |
T |
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