View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11022_low_13 (Length: 442)

Name: NF11022_low_13
Description: NF11022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11022_low_13
NF11022_low_13
[»] chr6 (19 HSPs)
chr6 (93-422)||(3902683-3903028)
chr6 (248-394)||(29326228-29326374)
chr6 (1-92)||(3902568-3902659)
chr6 (1-92)||(3902210-3902301)
chr6 (93-167)||(3902326-3902400)
chr6 (1-93)||(11956411-11956504)
chr6 (243-398)||(10485726-10485885)
chr6 (1-93)||(29325833-29325926)
chr6 (1-93)||(29326008-29326101)
chr6 (249-394)||(17289616-17289764)
chr6 (241-344)||(19478763-19478864)
chr6 (248-394)||(13660428-13660573)
chr6 (241-384)||(17280881-17281025)
chr6 (1-83)||(17281283-17281366)
chr6 (241-306)||(28696936-28697004)
chr6 (256-343)||(11956127-11956212)
chr6 (1-72)||(19478442-19478514)
chr6 (10-71)||(10485374-10485436)
chr6 (10-93)||(5600679-5600763)
[»] scaffold0067 (2 HSPs)
scaffold0067 (241-398)||(33310-33467)
scaffold0067 (1-93)||(33673-33766)
[»] chr3 (27 HSPs)
chr3 (241-392)||(26929337-26929487)
chr3 (248-394)||(6025709-6025850)
chr3 (241-344)||(33088683-33088784)
chr3 (241-344)||(53120146-53120247)
chr3 (1-93)||(26928902-26928989)
chr3 (241-369)||(26962649-26962777)
chr3 (1-93)||(6025457-6025550)
chr3 (241-344)||(13022674-13022775)
chr3 (261-343)||(11777219-11777299)
chr3 (1-93)||(21494017-21494110)
chr3 (1-93)||(20810666-20810759)
chr3 (1-87)||(38436672-38436759)
chr3 (262-394)||(21493665-21493795)
chr3 (1-93)||(13022319-13022412)
chr3 (1-84)||(1740826-1740910)
chr3 (241-341)||(38436340-38436438)
chr3 (3-82)||(795122-795202)
chr3 (1-82)||(53119822-53119905)
chr3 (163-213)||(26929108-26929159)
chr3 (1-87)||(26962352-26962439)
chr3 (1-93)||(33089051-33089144)
chr3 (19-80)||(47408698-47408761)
chr3 (168-228)||(6025617-6025679)
chr3 (1-39)||(14425293-14425331)
chr3 (14-94)||(25023627-25023709)
chr3 (243-293)||(26707481-26707531)
chr3 (244-293)||(7806034-7806083)
[»] chr4 (14 HSPs)
chr4 (241-390)||(10318199-10318345)
chr4 (1-93)||(30564121-30564214)
chr4 (243-394)||(24490721-24490873)
chr4 (4-93)||(10318483-10318573)
chr4 (1-93)||(24490326-24490419)
chr4 (241-344)||(10119873-10119974)
chr4 (309-394)||(8082782-8082867)
chr4 (241-340)||(653613-653710)
chr4 (1-93)||(10120289-10120382)
chr4 (1-83)||(10120527-10120610)
chr4 (10-93)||(15498939-15499023)
chr4 (1-81)||(17359792-17359872)
chr4 (10-93)||(15451479-15451563)
chr4 (165-212)||(30563981-30564029)
[»] chr1 (15 HSPs)
chr1 (241-393)||(12179326-12179484)
chr1 (241-344)||(13891430-13891531)
chr1 (241-344)||(31289380-31289481)
chr1 (241-344)||(26650495-26650595)
chr1 (241-342)||(10106666-10106765)
chr1 (241-344)||(38734751-38734852)
chr1 (241-344)||(39746741-39746842)
chr1 (241-306)||(19406284-19406349)
chr1 (1-87)||(26650880-26650967)
chr1 (10-83)||(39747002-39747076)
chr1 (241-294)||(14724932-14724985)
chr1 (265-344)||(14582397-14582474)
chr1 (1-71)||(19422599-19422670)
chr1 (1-93)||(13891105-13891198)
chr1 (185-229)||(10106511-10106555)
[»] chr7 (10 HSPs)
chr7 (1-93)||(47761920-47762013)
chr7 (251-394)||(47762348-47762488)
chr7 (241-344)||(24529015-24529116)
chr7 (241-341)||(7357959-7358057)
chr7 (251-344)||(33226954-33227045)
chr7 (241-341)||(28291912-28292010)
chr7 (1-93)||(9973756-9973849)
chr7 (1-93)||(33226641-33226734)
chr7 (262-344)||(9973915-9973995)
chr7 (245-294)||(21235492-21235541)
[»] chr2 (5 HSPs)
chr2 (241-344)||(42915188-42915289)
chr2 (245-390)||(43111487-43111629)
chr2 (242-306)||(39959799-39959863)
chr2 (1-75)||(5089572-5089647)
chr2 (241-332)||(5089703-5089792)
[»] chr8 (14 HSPs)
chr8 (241-344)||(19430658-19430759)
chr8 (241-344)||(19436100-19436201)
chr8 (241-344)||(19566807-19566908)
chr8 (241-344)||(19572249-19572350)
chr8 (241-341)||(13584795-13584893)
chr8 (241-344)||(31031183-31031282)
chr8 (1-93)||(19566455-19566548)
chr8 (1-93)||(19430306-19430399)
chr8 (1-93)||(31030823-31030916)
chr8 (248-340)||(33616135-33616225)
chr8 (1-93)||(33616434-33616527)
chr8 (12-85)||(33848312-33848387)
chr8 (94-158)||(19435838-19435901)
chr8 (94-158)||(19571987-19572050)
[»] scaffold0011 (3 HSPs)
scaffold0011 (241-344)||(7505-7607)
scaffold0011 (241-344)||(2251-2353)
scaffold0011 (1-93)||(7341-7434)
[»] scaffold0132 (2 HSPs)
scaffold0132 (241-344)||(2488-2589)
scaffold0132 (241-344)||(10448-10549)
[»] chr5 (5 HSPs)
chr5 (241-342)||(7805698-7805797)
chr5 (241-342)||(14374749-14374848)
chr5 (241-340)||(13582053-13582150)
chr5 (240-299)||(31987371-31987430)
chr5 (1-81)||(31987020-31987101)


Alignment Details
Target: chr6 (Bit Score: 184; Significance: 2e-99; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 93 - 422
Target Start/End: Original strand, 3902683 - 3903028
Alignment:
Q  93 ttaagcaaacacgtttttgtttcaagttggatatatccgtaaaaatccggatacgcgtttaggatcagaccgaatttatttgttacgcggtgacgctttc 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||  | |||||||||||    
T  3902683 ttaagcaaacacgtttttgtttcaagttggatatatccgtaaaaatccggatacgcatttaggatcagaacaaatttatttgttatactgtgacgctttc 3902782  T
Q  193 ggataatgattaaattaattaat----------------cattttcaagtgacnnnnnnntatatgggtaccccaagggcacatccttggaggtcacccc 276  Q
    |||||||||||||||||||||||                |||||||||||||        |||||||||||| |||||||||| ||||||||||||||||    
T  3902783 ggataatgattaaattaattaattaattaattaatttatcattttcaagtgaaaaaaatatatatgggtacctcaagggcacacccttggaggtcacccc 3902882  T
Q  277 acccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtc--acacactaattttcacatagtgtttttctatccaatt 374  Q
    |||||||||||||||||||||||||||||||  | ||||||| || ||| |||||||||||  |||||||| || |||||||||||||||||||||||||    
T  3902883 acccttatataaacacttgctagttggtgtg--attcaccaatgtaggacatttttaagtctcacacactagttctcacatagtgtttttctatccaatt 3902980  T
Q  375 tttcactagaattaactagtattctacctgatgacaatgtggtaattg 422  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  3902981 tttcactagaattaactagtattccaccagatgacaatgtggtaattg 3903028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 248 - 394
Target Start/End: Original strand, 29326228 - 29326374
Alignment:
Q  248 cccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtca--cacacta 345  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||| ||| || ||||||||||||  |||||||    
T  29326228 cccaaggacatacccttggaggtcaccccacccttatataaacacttgctagttg--gtgtgcctcaccaatgtgagacatttttaagtcacgcacacta 29326325  T
Q  346 attttcacatagtgtttttctatccaatttttcactagaattaactagt 394  Q
    ||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  29326326 attcttacatagtgtttttctatccaacttttcactagaattaactagt 29326374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3902568 - 3902659
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggggaactctccttttataggcagagttcgtagcaaaaaacgagtgact 92  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3902568 cacatgaatcatcaactgtgaatttcagtgtaaagaatgagtgcgggaactctccttttataggcagagttcgtaacaaaaaacgagtgact 3902659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3902210 - 3902301
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggggaactctccttttataggcagagttcgtagcaaaaaacgagtgact 92  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  3902210 cacatgaatcatcaattgtgaatttcagtgtaaagaatgagtgggggaactctccttttataggcagagttcgtaacaaaaaatgagtgact 3902301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 3902326 - 3902400
Alignment:
Q  93 ttaagcaaacacgtttttgtttcaagttggatatatccgtaaaaatccggatacgcgtttaggatcagaccgaat 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3902326 ttaagcaaacacgtttttgtttcaagttggatatatccgtaaaaatccggatacgcgtttaggatcagaacgaat 3902400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11956504 - 11956411
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||| |||||||||||||||||    
T  11956504 cacaggaatcatcaactgtgaatttcggtgtaaagaatgagtggggagagctctccttttataggtagagttcgtaacaaaaaacgagtgactt 11956411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 398
Target Start/End: Original strand, 10485726 - 10485885
Alignment:
Q  243 ggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagt----ca 338  Q
    |||||| |||||||||| ||||||| ||||| | ||||||||||||||||||||||||||  ||||| |||||||| |||| | ||||||||||    ||    
T  10485726 ggtacctcaagggcacacccttggatgtcactctacccttatataaacacttgctagttg--gtgtggctcaccaatgtggaacatttttaagtctcaca 10485823  T
Q  339 cacactaattttcacatagtgtttttctatccaatttt--tcactagaattaactagtattc 398  Q
    ||||||| || | |||| ||||||||||||||||||||  |||||||| |||||||||||||    
T  10485824 cacactagttcttacattgtgtttttctatccaatttttctcactagatttaactagtattc 10485885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 29325833 - 29325926
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggggaactctccttttataggcagagttcgtagc-aaaaaacgagtgactt 93  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | ||||||||||||||||    
T  29325833 cacaggaatcatcaactatgaatttcggtgtaaagaatgagtgggggagctctccttttataggctgagttcgtaacaaaaaaacgagtgactt 29325926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 29326008 - 29326101
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggggaactctccttttataggcagagttcgtagc-aaaaaacgagtgactt 93  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||    
T  29326008 cacaggaatcatcaactatgaatttcgctgtaaagaatgagtgggggagctctccttttataggcagagttcgtaacaaaaaaacgagtgactt 29326101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 394
Target Start/End: Complemental strand, 17289764 - 17289616
Alignment:
Q  249 ccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcacacac----t 344  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||||| |||||||||   |||||||| |||||| |||||||||||||||||    |    
T  17289764 ccaagggcacatccttggatgtcactctacccttatataaacacttgcttgttggtgtgg--ctcaccaatgtgggacatttttaagtcacacacacact 17289667  T
Q  345 aattttcacatagtgtttttctatccaatttt-tcactagaattaactagt 394  Q
    | || | |||| |||||||||||||||||||| |||||||| | |||||||    
T  17289666 agttcttacattgtgtttttctatccaattttctcactagattcaactagt 17289616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 19478763 - 19478864
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| |||||||||| || | |||||||||||||||||| |||||||  ||||| |||||||| |||||| ||||||||||||||    
T  19478763 tgggtaccccaagggcacacccttggaggttactctacccttatataaacactttctagttg--gtgtggctcaccaatgtgggacatttttaagtcaca 19478860  T
Q  341 cact 344  Q
    ||||    
T  19478861 cact 19478864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 394
Target Start/End: Original strand, 13660428 - 13660573
Alignment:
Q  248 cccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcacacac--ta 345  Q
    |||||||||||| | |||||||||| |||||||||||||||||||||||||||| |||||   ||||||||  |  ||||||||||||||||||||  ||    
T  13660428 cccaagggcacacctttggaggtcatcccacccttatataaacacttgctagttagtgtgg--ctcaccaatataagatatttttaagtcacacacacta 13660525  T
Q  346 attttcacatagtgtttttctatccaatttttcactagaattaactagt 394  Q
     || | || |  ||||||||||||||| ||  |||||||||||||||||    
T  13660526 gttcttaccttatgtttttctatccaacttc-cactagaattaactagt 13660573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 384
Target Start/End: Complemental strand, 17281025 - 17280881
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||| | ||||||||| ||||||||||||| | |||||||||||||||||||||||||| | ||   |||||||| |||  | ||||||||||||||    
T  17281025 tgggtacgcgaagggcacacccttggaggtcactctacccttatataaacacttgctagttgatatgg--ctcaccaatgtgaaacatttttaagtcaca 17280928  T
Q  341 cac--taattttcacatagtgtttttctatccaatttt-tcactaga 384  Q
    |||  || || | ||||  | ||||||||||||||||| ||||||||    
T  17280927 cacactagttcttacattctatttttctatccaattttctcactaga 17280881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 17281366 - 17281283
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaa 83  Q
    |||| ||| |||||||| ||||||||||||| |||||||||||||| || ||||||||||||||| |||||| ||| |||||||    
T  17281366 cacaggaagcatcaactatgaatttcggtgttaagaatgagtggggtgagctctccttttatagggagagtttgtaacaaaaaa 17281283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 28697004 - 28696936
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttat---ataaacacttgctagttggtgt 306  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||   ||||||||||||||||||||||    
T  28697004 tgggtaccccaagtgcacacccttagaggtcaccccacccttatataataaacacttgctagttggtgt 28696936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 11956212 - 11956127
Alignment:
Q  256 cacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcacacac 343  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||   ||||| |||||| | |||| | |||||||||||| ||||    
T  11956212 cacatccttgtaggtcaccccacccttatataaacactttctagtt--agtgtggctcacctatgtggaacatttttaagtcatacac 11956127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19478442 - 19478514
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttc 72  Q
    |||| ||||||||||||| ||| |||||||| ||||||||| |||| || ||||||||||||||| |||||||    
T  19478442 cacaggaatcatcaactgcgaaattcggtgtgaagaatgaggggggcgagctctccttttataggaagagttc 19478514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 10485374 - 10485436
Alignment:
Q  10 catcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagtt 71  Q
    ||||||| |||||||||||||| |||||||||||||| || ||||||||||| ||| ||||||    
T  10485374 catcaaccgtgaatttcggtgtgaagaatgagtggggcgagctctccttttacagggagagtt 10485436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 5600763 - 5600679
Alignment:
Q  10 catcaactgtgaatttcggtgtaaagaatgagtgggggaa-ctctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||||| | |||||||||| ||||||||| |||| || || ||||||||||||||| |||||| ||| ||||||  |||||||||    
T  5600763 catcaattatgaatttcggagtaaagaataagtgaggcaagctctccttttatagggagagtttgtaacaaaaacggagtgactt 5600679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 241 - 398
Target Start/End: Complemental strand, 33467 - 33310
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagt--ca 338  Q
    |||||| ||||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||  |||| |||| ||| |||||| ||||||||||  ||    
T  33467 tgggtatcccaatggcacacccttggagctcaccccactcttatataaacacttgctagttgg--tgtggctcatcaatgtgggacatttttaagtcaca 33370  T
Q  339 cacactaattttcacatagtgtttttctatccaatttttcactagaattaactagtattc 398  Q
    ||||||| || | |||| ||||||||||||||||||||||||||||||||||||||||||    
T  33369 cacactagttcttacattgtgtttttctatccaatttttcactagaattaactagtattc 33310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33766 - 33673
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||| || ||||||||||||||||| |||||||| |||||| ||||||||||    
T  33766 cacatgaatcatcaaatgtgaatttcagtgttaagaatgagtggggtgagctctccttttataggcatagttcgtaacaaaaatcgagtgactt 33673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 241 - 392
Target Start/End: Original strand, 26929337 - 26929487
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| |||  | ||||||||||||||    
T  26929337 tgggtaccccaagggcacacacttggaggtcaccccacccttatataaacacttgctagttg--gtgtaactcaccaatgtgaaacatttttaagtcaca 26929434  T
Q  341 cactaattttcacatagtgtttttctatccaa-tttttcactagaattaacta 392  Q
    ||||| || | ||||  ||||||||||||||| ||||| ||||||||||||||    
T  26929435 cactagttcttacattatgtttttctatccaattttttgactagaattaacta 26929487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 248 - 394
Target Start/End: Original strand, 6025709 - 6025850
Alignment:
Q  248 cccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcacacactaat 347  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||   |||||||||||||| ||| || |||||||| ||||||||  ||    
T  6025709 cccaagggcacatccttggaggtcaccccatccttatataaacacttgctagtt--agtgtgactcaccaatgtgagacatttttaaatcacacac--at 6025804  T
Q  348 tttcacatagtgtttttctatccaatttttcactagaattaactagt 394  Q
    ||| || | |||||||||| |||||  || |||||||||||||||||    
T  6025805 ttttaccttgtgtttttctttccaa-cttccactagaattaactagt 6025850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 344
Target Start/End: Complemental strand, 33088784 - 33088683
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||||||||||| |||||||  || || |||||||| |||||| ||||||||||||||    
T  33088784 tgggtaccccaagggcacacccttggaggtcactctacccttatataaacactttctagttg--gtttggctcaccaatgtgggacatttttaagtcaca 33088687  T
Q  341 cact 344  Q
    ||||    
T  33088686 cact 33088683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 53120146 - 53120247
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||||| |||||||  ||||| |||||||| |||||| ||||||||||||||    
T  53120146 tgggtaccccaagggcacacccttggaggtcactgtacccttatataaacactttctagttg--gtgtggctcaccaatgtgggacatttttaagtcaca 53120243  T
Q  341 cact 344  Q
    ||||    
T  53120244 cact 53120247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26928902 - 26928989
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggggaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||||||||||||||||||||||||||||||||||||     ||| || |||| ||||||||||||||||||||| |||||||||||||||||    
T  26928902 cacatgaatcatcaactgtgaatttcggtgtaaagaa-----gggcgagctcttcttttataggcagagttcgtaacaaaaaacgagtgactt 26928989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 369
Target Start/End: Original strand, 26962649 - 26962777
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagt--ca 338  Q
    ||||||||||||||||||| ||||| ||||||| | |||||||||||||||||| |||||||  ||||| |||||||| ||| ||  |||||||||  ||    
T  26962649 tgggtaccccaagggcacacccttgaaggtcactctacccttatataaacactttctagttg--gtgtggctcaccaatgtgagacttttttaagtcaca 26962746  T
Q  339 cacactaattttcacatagtgtttttctatc 369  Q
    ||||||| |||| |||| |||||||||||||    
T  26962747 cacactagtttttacattgtgtttttctatc 26962777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6025457 - 6025550
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtggg-ggaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||  || | ||||||||||||| |||||| ||| |||||||||||||||||    
T  6025457 cacataaatcatcaactgtgaaattcggtgtaaagaatgagtgggacgagccctccttttatagggagagtttgtaacaaaaaacgagtgactt 6025550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 13022674 - 13022775
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    |||||||||||||| |||| ||||||||||||| |  ||||||||||||||||| ||| |||  ||||| |||||||| |||||| ||||||||||||||    
T  13022674 tgggtaccccaaggtcacacccttggaggtcactcttcccttatataaacactttctaattg--gtgtggctcaccaatgtgggacatttttaagtcaca 13022771  T
Q  341 cact 344  Q
    ||||    
T  13022772 cact 13022775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 11777219 - 11777299
Alignment:
Q  261 ccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcacacac 343  Q
    ||||||||||||||| |||||||||||||||||||||||||   ||||| |||||||| |||||| |||||||||||||||||    
T  11777219 ccttggaggtcaccctacccttatataaacacttgctagtt--agtgtggctcaccaatgtgggacatttttaagtcacacac 11777299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 21494110 - 21494017
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| ||  |||||||||||||| ||| |||||| ||||||| ||| |||||    
T  21494110 cacatgaatcatcaactgtgaatttcggtggtaagaatgagtggggcgagatctccttttataggaagaattcgtaacaaaaaatgagagactt 21494017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 20810666 - 20810759
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| ||||||||||||| ||| || ||||| ||||||||| |||| || ||||||||||||||| |||||||||| ||||||||||| |||||    
T  20810666 cacaggaatcatcaactgcgaaatttggtgtgaagaatgaggggggcgagctctccttttataggaagagttcgtaacaaaaaacgagagactt 20810759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 38436759 - 38436672
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgag 87  Q
    |||| |||||||| |||||||| |||||||| ||||||||| |||| || |||||||||||||||  ||||||||| |||||||||||    
T  38436759 cacaggaatcatcgactgtgaaattcggtgtgaagaatgaggggggcgagctctccttttataggaggagttcgtaacaaaaaacgag 38436672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 394
Target Start/End: Complemental strand, 21493795 - 21493665
Alignment:
Q  262 cttggaggtcaccccacccttatat-aaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcacacactaattttcacatagtgt 360  Q
    ||||||||||||||||||||||||| ||| | |||||||||  ||| || ||||| || ||| || |||||||||||| |||||| |||| || | ||||    
T  21493795 cttggaggtcaccccacccttatataaaatagttgctagtt--tgtttggctcacaaatgtgagacatttttaagtcaaacactagtttttaccttgtgt 21493698  T
Q  361 ttttctatccaatttttcactagaattaactagt 394  Q
    ||||||||||||  || ||||| |||||||||||    
T  21493697 ttttctatccaa-cttccactataattaactagt 21493665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 13022319 - 13022412
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| ||||||||||||| ||| |||| ||||||||||||| || | || |||||||||||||||  ||||||||| |||||||||||| ||||    
T  13022319 cacaggaatcatcaactgcgaaattcgatgtaaagaatgaggggagcgagctctccttttataggaggagttcgtaacaaaaaacgagttactt 13022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 1740910 - 1740826
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtg-ggggaactctccttttataggcagagttcgtagcaaaaaac 84  Q
    |||||||| | ||||||||||||||||||||||||||| |||| |  |||||||| ||||||| | |||||||||| ||||||||    
T  1740910 cacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacgaactctcattttatatgaagagttcgtaacaaaaaac 1740826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 241 - 341
Target Start/End: Complemental strand, 38436438 - 38436340
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||| ||| ||||| | |||| |||||| | ||||||||||||||||||  ||||||   |||| |||||||| |||||| ||||||||||||||    
T  38436438 tgggtaccctaagagcacacctttggtggtcactctacccttatataaacactttttagttg--atgtggctcaccaatgtgggacatttttaagtcaca 38436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 795202 - 795122
Alignment:
Q  3 catgaatcatcaactgtgaatttcggtgtaaagaatgagtg-ggggaactctccttttataggcagagttcgtagcaaaaa 82  Q
    |||||| ||||||||||||||||| |||||||||||  ||| |||||  |||||||||||||| |||| ||||| ||||||    
T  795202 catgaagcatcaactgtgaatttcagtgtaaagaataggtgaggggagttctccttttatagggagagatcgtaacaaaaa 795122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 53119822 - 53119905
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg--gaactctccttttataggcagagttcgtagcaaaaa 82  Q
    ||||||||||||| |||||| | |||||||||||||||||| ||||  || ||||||||||| |||  ||||||||| ||||||    
T  53119822 cacatgaatcatcgactgtggaattcggtgtaaagaatgagggggggcgagctctccttttaaaggaggagttcgtaacaaaaa 53119905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 26929108 - 26929159
Alignment:
Q  163 cgaatttatttgttacgcg-gtgacgctttcggataatgattaaattaatta 213  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  26929108 cgaatttatttgttatgcgtgtgaagctttcggataatgattaaattaatta 26929159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26962352 - 26962439
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgag 87  Q
    |||| |||||||| | |||||||||  |||||||||  |||||||| || ||||||||||||||| |||||| ||| |||||||||||    
T  26962352 cacaggaatcatcgattgtgaattttagtgtaaagatggagtggggcgagctctccttttataggaagagtttgtaacaaaaaacgag 26962439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33089144 - 33089051
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| ||||||||||||| | | |||| ||  ||||||||| |||| || |||||||||||||||  ||||||||| ||||||||||| |||||    
T  33089144 cacaggaatcatcaactgcgtaattcgatgcgaagaatgaggggggcgagctctccttttataggaggagttcgtaacaaaaaacgagagactt 33089051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 47408698 - 47408761
Alignment:
Q  19 tgaatttcggtgtaaagaatgagtgggg-gaactct-ccttttataggcagagttcgtagcaaa 80  Q
    ||||||||| ||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||||    
T  47408698 tgaatttcgatgtaaagaatgagcggggtgaactctcccttttatagggagagttcgtaacaaa 47408761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 6025617 - 6025679
Alignment:
Q  168 ttatttgttacgcg-gtgacgctttcggataatgattaaattaattaa-tcattttcaagtga 228  Q
    |||||||||| ||| |||||||||||| |||||||| ||||||||||| ||||||||| ||||    
T  6025617 ttatttgttaagcgtgtgacgctttcgaataatgataaaattaattaattcattttcatgtga 6025679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14425331 - 14425293
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatg 39  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  14425331 cacaggaatcatcaactgtgaatttcggtgtacagaatg 14425293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 25023709 - 25023627
Alignment:
Q  14 aactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaac-gagtgacttt 94  Q
    |||||||||||||| ||||  |||||||||||| || ||||||||||||||| |||| || || |||||| | ||||||||||    
T  25023709 aactgtgaatttcgatgtactgaatgagtggggcgagctctccttttatagggagagctcataacaaaaatcggagtgacttt 25023627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 26707481 - 26707531
Alignment:
Q  243 ggtaccccaagggcacatccttggaggtcaccccacccttatataaacact 293  Q
    |||||||||| ||||||||||||| ||||||||| | ||||||||| ||||    
T  26707481 ggtaccccaaaggcacatccttggcggtcaccccccacttatataagcact 26707531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 7806083 - 7806034
Alignment:
Q  244 gtaccccaagggcacatccttggaggtcaccccacccttatataaacact 293  Q
    ||||||||||||||||||||||||||| | ||  | ||||||||||||||    
T  7806083 gtaccccaagggcacatccttggaggtgatccaccacttatataaacact 7806034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 241 - 390
Target Start/End: Complemental strand, 10318345 - 10318199
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||||| |||||| |||||||||||   |||| ||| ||| || |||||||| |||||    
T  10318345 tgggtaccccaagg-cacacccttggaggtcatcccacccttatataatcacttgttagttggtgtgg--ctcatcaatgtgagacatttttaaatcaca 10318249  T
Q  341 cactaattttcacatagtgtttttctatccaatttttcactagaattaac 390  Q
    ||||| || | ||||||||||||||||||||| |||||||||||||||||    
T  10318248 cactagttattacatagtgtttttctatccaacttttcactagaattaac 10318199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 30564214 - 30564121
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtggg-ggaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||| |||||||||| |||||||||||||||||    
T  30564214 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggacgagctctccttttatagggagagttcgtaacaaaaaacgagtgactt 30564121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 243 - 394
Target Start/End: Original strand, 24490721 - 24490873
Alignment:
Q  243 ggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagt--caca 340  Q
    |||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||  ||||| ||| ||||  ||||| ||||||||||  ||||    
T  24490721 ggtacctcaagggcacacccttggaggtcactctacccttatataaacacttgctagttg--gtgtggctctccaatatgggacatttttaagttacaca 24490818  T
Q  341 cactaattttcacatagtgtttttctatccaatttt-tcactagaattaactagt 394  Q
    ||||| || | |||| |||||||||||||||||||| |||||||| |||||||||    
T  24490819 cactagttcttacattgtgtttttctatccaattttctcactagatttaactagt 24490873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 10318573 - 10318483
Alignment:
Q  4 atgaatcatcaactgtgaatttcggtgtaaagaatgagt-gggggaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  10318573 atgaatcatgaactgtgaatttcggtgtaaagaatgagttgggggagctctccttttataggcagagtttgtaacaaaaaacgagtgactt 10318483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 24490326 - 24490419
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggggaa-ctctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| |||||||||||||||||||||||||| |||||||||||| | || ||||||||||||||| |||||||||| |||||||||||||||||    
T  24490326 cacaagaatcatcaactgtgaatttcggtgtgaagaatgagtggagcaagctctccttttatagggagagttcgtaacaaaaaacgagtgactt 24490419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 344
Target Start/End: Complemental strand, 10119974 - 10119873
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||| ||| ||||||||||||| | |||||||||||||||||| ||||||||  |||| |||||||| |||||| ||||||||||||||    
T  10119974 tgggtaccccaagggtacacccttggaggtcactctacccttatataaacactttctagttgg--tgtggctcaccaatgtgggacatttttaagtcaca 10119877  T
Q  341 cact 344  Q
    ||||    
T  10119876 cact 10119873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 394
Target Start/End: Complemental strand, 8082867 - 8082782
Alignment:
Q  309 gactcaccaacgtgggatatttttaagtcacacactaattttcacatagtgtttttctatccaatttttcactagaattaactagt 394  Q
    |||||||||| |||||  ||||||||||||||||||| || | ||||||||||||||||||||| |||||||||||||||||||||    
T  8082867 gactcaccaatgtggggcatttttaagtcacacactagttcttacatagtgtttttctatccaacttttcactagaattaactagt 8082782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 241 - 340
Target Start/End: Original strand, 653613 - 653710
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| ||||||||||||| |  ||||||||||||||||| |||||||  | |||||| ||||| |||||| ||||||||||||||    
T  653613 tgggtaccccaagggcacacccttggaggtcactcttcccttatataaacacttactagttg--gggtgactaaccaatgtgggacatttttaagtcaca 653710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 10120382 - 10120289
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| |||||||| |||||||| ||||||||  |||||||| |||| || ||||||||||||||| |||||||||| ||||||||||| |||||    
T  10120382 cacaggaatcatcgactgtgaaattcggtgtgtagaatgaggggggcgagctctccttttataggaagagttcgtaacaaaaaacgagagactt 10120289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 10120610 - 10120527
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaa 83  Q
    |||| |||||||| |||| ||| ||||||||  |||||||| |||| || ||||||||||||||| |||||||||| |||||||    
T  10120610 cacaggaatcatcgactgcgaaattcggtgtgtagaatgaggggggcgagctctccttttataggaagagttcgtaacaaaaaa 10120527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 15498939 - 15499023
Alignment:
Q  10 catcaactgtgaatttcggtgtaaagaatgagtgggggaactctccttttataggcagagttcgtagcaaaaaac-gagtgactt 93  Q
    ||||||||||||||||| |||||  ||||||| ||   | ||||||||||||||| ||||||||||  ||||||| |||||||||    
T  15498939 catcaactgtgaatttcagtgtactgaatgagaggacaagctctccttttatagggagagttcgtaataaaaaactgagtgactt 15499023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17359792 - 17359872
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaa 81  Q
    |||||||| ||||||||| ||||||| |||| || ||| |||| || |||||||||||||||||  |||||||||| |||||    
T  17359792 cacatgaaacatcaactg-gaatttcagtgtcaataataagtgaggcgaactctccttttatagtgagagttcgtaacaaaa 17359872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 15451479 - 15451563
Alignment:
Q  10 catcaactgtgaatttcggtgtaaagaatgagtgggggaactctccttttataggcagagttcgtagcaaaaaac-gagtgactt 93  Q
    ||||||||||||||||| |||||  |||| |||||   | ||||||||||||||| |||||| |||  ||||||| |||||||||    
T  15451479 catcaactgtgaatttcagtgtactgaataagtggacaagctctccttttatagggagagtttgtaataaaaaactgagtgactt 15451563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 30564029 - 30563981
Alignment:
Q  165 aatttatttgttacgcg-gtgacgctttcggataatgattaaattaatt 212  Q
    ||||||||||||||  | |||||||||| ||||||||||||||||||||    
T  30564029 aatttatttgttacaagtgtgacgcttttggataatgattaaattaatt 30563981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 12179326 - 12179484
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtca-ccccacccttatataaacacttgctagttggtgt--gtgactcaccaacgtgggatatttttaagt- 336  Q
    |||||| ||||||||||||  |||| |||||| ||||||||||||||||||||||||||||||||||  ||| |||||||| || ||||||||||||||     
T  12179326 tgggtatcccaagggcacacacttgcaggtcatccccacccttatataaacacttgctagttggtgtacgtggctcaccaatgtaggatatttttaagtc 12179425  T
Q  337 -cacacactaattttcacatagtgtttttctatccaa-tttttcactagaattaactag 393  Q
     ||||||||| || | |||| |||||||||||||||| ||||| |||||||||||||||    
T  12179426 acacacactagttcttacattgtgtttttctatccaatttttttactagaattaactag 12179484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 13891430 - 13891531
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    |||||||| |||||||||||||||||||||||| |  ||||||||||||||||| |||||||  ||||| |||||||| |||||| ||||||||||||||    
T  13891430 tgggtacctcaagggcacatccttggaggtcactcttcccttatataaacactttctagttg--gtgtggctcaccaatgtgggacatttttaagtcaca 13891527  T
Q  341 cact 344  Q
    ||||    
T  13891528 cact 13891531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 31289380 - 31289481
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||| ||||||||| ||||||||||||| | |||||||||||||||||| |||||||  ||||| |||||||| |||||| ||||||||||||||    
T  31289380 tgggtaccctaagggcacacccttggaggtcactctacccttatataaacactttctagttg--gtgtggctcaccaatgtgggacatttttaagtcaca 31289477  T
Q  341 cact 344  Q
    ||||    
T  31289478 cact 31289481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 344
Target Start/End: Complemental strand, 26650595 - 26650495
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||| |||||||   |||| |||||||| |||||| ||||||||||||||    
T  26650595 tgggtaccccaagggcacatccttggaggtcactctacccttatat-aacactttctagttg--atgtggctcaccaatgtgggacatttttaagtcaca 26650499  T
Q  341 cact 344  Q
    ||||    
T  26650498 cact 26650495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 10106666 - 10106765
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| ||||||||||||| |  ||||||||||||||||| |||||||  | |||||| ||||| |||||| ||||||||||||||    
T  10106666 tgggtaccccaagggcacacccttggaggtcactctccccttatataaacacttactagttg--gggtgactaaccaatgtgggacatttttaagtcaca 10106763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 38734751 - 38734852
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    |||||| || ||||||||| | ||| ||||||| | |||||||||||||||||| |||||||  ||||| ||||||||  ||||| ||||||||||||||    
T  38734751 tgggtatcctaagggcacacctttgaaggtcactctacccttatataaacactttctagttg--gtgtggctcaccaatatgggacatttttaagtcaca 38734848  T
Q  341 cact 344  Q
    ||||    
T  38734849 cact 38734852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 344
Target Start/End: Complemental strand, 39746842 - 39746741
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||  |||||||||||||||||||| || | |||||||||||||||||| ||||||||||||   ||||||||  ||  | ||||||||||||||    
T  39746842 tgggtaccttaagggcacatccttggaggttactctacccttatataaacactttctagttggtgtgg--ctcaccaatatgaaacatttttaagtcaca 39746745  T
Q  341 cact 344  Q
    ||||    
T  39746744 cact 39746741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 19406349 - 19406284
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgt 306  Q
    |||||||||||| |||||| |||||| |||||| | |||||||||||||||||| |||||||||||    
T  19406349 tgggtaccccaaaggcacacccttgggggtcactctacccttatataaacactttctagttggtgt 19406284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 26650967 - 26650880
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgag 87  Q
    ||||||||||||| |||||| | |||||||| ||||||||| |||| || |||||||||| ||||  ||||||||| |||||||||||    
T  26650967 cacatgaatcatcgactgtggaattcggtgtgaagaatgaggggggcgagctctccttttgtaggaggagttcgtaacaaaaaacgag 26650880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 39747076 - 39747002
Alignment:
Q  10 catcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaa 83  Q
    ||||||||| ||| ||| |||| ||||||||| |||| || ||||||||||||||| |||||||||| |||||||    
T  39747076 catcaactgcgaaattcagtgtgaagaatgaggggggcgagctctccttttataggaagagttcgtaacaaaaaa 39747002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 14724932 - 14724985
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacactt 294  Q
    |||||||||||| |||||||| ||| |||||||||| | |||||||||||||||    
T  14724932 tgggtaccccaatggcacatctttgtaggtcaccccccacttatataaacactt 14724985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 14582397 - 14582474
Alignment:
Q  265 ggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcacacact 344  Q
    ||||||||| | ||||||||||||| | || ||||||||||||    ||||||| |||||| ||||||||||||||||||    
T  14582397 ggaggtcactctacccttatataaaaaatttctagttggtgtggt--tcaccaatgtgggacatttttaagtcacacact 14582474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19422670 - 19422599
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagtt 71  Q
    ||||||||||||| |||||||| |||||||| ||||| ||| |||| || ||||| ||||||||| ||||||    
T  19422670 cacatgaatcatcgactgtgaaattcggtgtcaagaacgaggggggcgagctctcattttataggaagagtt 19422599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 13891105 - 13891198
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| ||||||||||||| | | |||  ||| ||||||||| || | || |||||||||||||||  ||||||||| |||||||||||| ||||    
T  13891105 cacaggaatcatcaactgcgtaattcaatgtgaagaatgaggggagcgagctctccttttataggaggagttcgtaacaaaaaacgagttactt 13891198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 10106511 - 10106555
Alignment:
Q  185 acgctttcggataatgattaaattaattaatcattttcaagtgac 229  Q
    |||| ||| |||||||| |||||||||| ||||||||||||||||    
T  10106511 acgcgttcagataatgactaaattaatttatcattttcaagtgac 10106555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 47761920 - 47762013
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||| |||||||||||| ||||    
T  47761920 cacatgaatcatcaattgtgaatttcggtgtaaagaatgagtggggcgagctctcattttataggcagagttcgtaacaaaaaacgagtaactt 47762013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 394
Target Start/End: Original strand, 47762348 - 47762488
Alignment:
Q  251 aagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcacacactaatttt 350  Q
    ||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||   ||||| || |||| | ||||||||||||||||||| || |    
T  47762348 aagggcacatccttggaggtcaccc-acctttatataaacatttactagttggtgtgg--ctcactaatgtggaacatttttaagtcacacactagttct 47762444  T
Q  351 cacatagtgtttttctatccaatttttcactagaattaactagt 394  Q
     |||| |||||||||||| ||||||||||||||| ||| |||||    
T  47762445 tacattgtgtttttctattcaatttttcactagacttagctagt 47762488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 24529015 - 24529116
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    |||||||||||| |||||| ||||||||||||| | |||||||||||||||||| |||||||  ||||| |||||||| || ||||||||||||||||||    
T  24529015 tgggtaccccaaaggcacacccttggaggtcactctacccttatataaacactttctagttg--gtgtggctcaccaatgtaggatatttttaagtcaca 24529112  T
Q  341 cact 344  Q
    ||||    
T  24529113 cact 24529116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 241 - 341
Target Start/End: Original strand, 7357959 - 7358057
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    |||||||| |||||||||||||||||||||||| | |||||||||||||||||| ||| |||  ||||| ||||||||  ||||| ||||||||||||||    
T  7357959 tgggtacctcaagggcacatccttggaggtcactctacccttatataaacactttctaattg--gtgtggctcaccaatatgggacatttttaagtcaca 7358056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 251 - 344
Target Start/End: Original strand, 33226954 - 33227045
Alignment:
Q  251 aagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcacacact 344  Q
    |||||||||  |||||||||||| | |||||||||||||||||| |||||||  |||||||||||||| |||| | ||||||||||||||||||    
T  33226954 aagggcacactcttggaggtcactctacccttatataaacactttctagttg--gtgtgactcaccaatgtggaacatttttaagtcacacact 33227045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 341
Target Start/End: Complemental strand, 28292010 - 28291912
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||||| |||||||  ||||  ||||||||  ||||| ||||||||||||||    
T  28292010 tgggtaccccaagggcacacccttggaggtcactatacccttatataaacactttctagttg--gtgtagctcaccaatatgggacatttttaagtcaca 28291913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9973756 - 9973849
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgg-gggaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||||||||||||||||| ||| |||||||| ||||||||| || | || ||||||||||||||| |||||| ||| ||||||||||| |||||    
T  9973756 cacatgaatcatcaactgcgaaattcggtgttaagaatgaggggagcgagctctccttttataggaagagtttgtaacaaaaaacgagagactt 9973849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33226641 - 33226734
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| |||||||| |||||| | |||||||||||||||||| |||| || |||||||||||||||  ||||||||| ||||||||||| |||||    
T  33226641 cacaggaatcatcgactgtggaattcggtgtaaagaatgaggggggcgagctctccttttataggaggagttcgtaacaaaaaacgagagactt 33226734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 9973915 - 9973995
Alignment:
Q  262 cttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcacacact 344  Q
    |||||||||||| | |||||||||| |||| || ||||||||||||   |||||||| |||||| ||||||||||||||||||    
T  9973915 cttggaggtcactctacccttatattaacaatttctagttggtgtgg--ctcaccaatgtgggacatttttaagtcacacact 9973995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 21235541 - 21235492
Alignment:
Q  245 taccccaagggcacatccttggaggtcaccccacccttatataaacactt 294  Q
    ||||| ||||| ||| |||||||||||||||| | |||||||||||||||    
T  21235541 tacccaaagggaacacccttggaggtcacccctcacttatataaacactt 21235492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 42915188 - 42915289
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||||||||||| |||||||  ||||| |||||||| |||||| ||||||||||||||    
T  42915188 tgggtaccccaagggcacacccttggaggtcactctacccttatataaacactttctagttg--gtgtggctcaccaatgtgggacatttttaagtcaca 42915285  T
Q  341 cact 344  Q
    ||||    
T  42915286 cact 42915289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 245 - 390
Target Start/End: Complemental strand, 43111629 - 43111487
Alignment:
Q  245 taccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcacacact 344  Q
    |||||||| | |||| ||||| |||||||||||||||||||||||||||||||||||||  |||| ||||| ||  ||||| |||||||||||||||  |    
T  43111629 taccccaatgacacacccttgtaggtcaccccacccttatataaacacttgctagttgg--tgtggctcactaatatgggacatttttaagtcacacggt 43111532  T
Q  345 aattttcacatagtgtttttctatccaatttttcactagaattaac 390  Q
    |||| | || | |  |||||||||||||  || |||||||||||||    
T  43111531 aattcttaccttgcatttttctatccaa-cttccactagaattaac 43111487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 39959799 - 39959863
Alignment:
Q  242 gggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgt 306  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  39959799 gggtaccccaaggacacacccttggaggtcaccccacccttatataaacatttgttagttggtgt 39959863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5089572 - 5089647
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgta 75  Q
    |||| ||||||||||||   || |||||||||||||||||| |||| || ||||||||||||||| ||||||||||    
T  5089572 cacaggaatcatcaacttcaaaattcggtgtaaagaatgaggggggcgagctctccttttataggaagagttcgta 5089647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 332
Target Start/End: Original strand, 5089703 - 5089792
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatattttt 332  Q
    |||||||  |||||||||| |||| |||||||| | | |||||||||||||||| ||| |||  ||||| |||||||| |||||| ||||||    
T  5089703 tgggtacatcaagggcacacccttagaggtcactctatccttatataaacactttctaattg--gtgtggctcaccaatgtgggacattttt 5089792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 5e-26; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 19430658 - 19430759
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    |||||| |||||||||||| ||||||||||||| | |||||||||||||||||| |||||||  ||||| |||||||| |||||| ||||||||||||||    
T  19430658 tgggtatcccaagggcacacccttggaggtcactctacccttatataaacactttctagttg--gtgtggctcaccaatgtgggacatttttaagtcaca 19430755  T
Q  341 cact 344  Q
    ||||    
T  19430756 cact 19430759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 19436100 - 19436201
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||||| |||||||  ||||| |||||||| |||||| ||||||||||||||    
T  19436100 tgggtaccccaagggcacacccttggaggtcactttacccttatataaacactttctagttg--gtgtggctcaccaatgtgggacatttttaagtcaca 19436197  T
Q  341 cact 344  Q
    ||||    
T  19436198 cact 19436201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 19566807 - 19566908
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    |||||| |||||||||||| ||||||||||||| | |||||||||||||||||| |||||||  ||||| |||||||| |||||| ||||||||||||||    
T  19566807 tgggtatcccaagggcacacccttggaggtcactctacccttatataaacactttctagttg--gtgtggctcaccaatgtgggacatttttaagtcaca 19566904  T
Q  341 cact 344  Q
    ||||    
T  19566905 cact 19566908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 19572249 - 19572350
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||||| |||||||  ||||| |||||||| |||||| ||||||||||||||    
T  19572249 tgggtaccccaagggcacacccttggaggtcactttacccttatataaacactttctagttg--gtgtggctcaccaatgtgggacatttttaagtcaca 19572346  T
Q  341 cact 344  Q
    ||||    
T  19572347 cact 19572350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 341
Target Start/End: Original strand, 13584795 - 13584893
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| ||||||| ||||| | |||| ||||||||||||| |||||||  ||||| |||||||| |||||| |||||||| |||||    
T  13584795 tgggtaccccaagggcacacccttggatgtcactctacccgtatataaacactttctagttg--gtgtggctcaccaatgtgggacatttttaaatcaca 13584892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 31031183 - 31031282
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||  | |||| |||||||  ||||| |||||||| ||| || ||||||||||||||    
T  31031183 tgggtaccccaagggcacatccttggaggtcactctacccttatat--atactttctagttg--gtgtggctcaccaatgtgagacatttttaagtcaca 31031278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19566455 - 19566548
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||||||||||||||||| ||| |||| ||||||||||||| |||| || |||||||||||||||  |||||| || |||||||||||| ||||    
T  19566455 cacatgaatcatcaactgcgaaattcgatgtaaagaatgaggggggcgagctctccttttataggaggagttcataacaaaaaacgagttactt 19566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19430306 - 19430399
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| ||||||||||||| ||| |||| ||||||||||||| |||| || |||||||||||||||  |||||| || |||||||||||| ||||    
T  19430306 cacaggaatcatcaactgcgaaattcgatgtaaagaatgaggggggcgagctctccttttataggaggagttcataacaaaaaacgagttactt 19430399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 31030823 - 31030916
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| |||||||| ||| || | |||||||||||||||||| |||| || |||||||||||||||  ||||||||| |||||||||||| ||||    
T  31030823 cacaggaatcatcgactatggaattcggtgtaaagaatgaggggggcgagctctccttttataggaggagttcgtaacaaaaaacgagttactt 31030916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 340
Target Start/End: Complemental strand, 33616225 - 33616135
Alignment:
Q  248 cccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    |||||||||||| |||||||||| || | |||||||||||||||||| ||||||||  |||| |||||||| ||| || ||||||||| ||||    
T  33616225 cccaagggcacacccttggaggttactctacccttatataaacactttctagttgg--tgtggctcaccaatgtgagacatttttaagccaca 33616135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33616527 - 33616434
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| |||||||| |||||| | |||||||||||||||||| |||| || |||||||||||||||  |||||| || |||||||||||| ||||    
T  33616527 cacaagaatcatcgactgtggaattcggtgtaaagaatgaggggggcgagctctccttttataggaggagttcataacaaaaaacgagttactt 33616434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 33848312 - 33848387
Alignment:
Q  12 tcaactgtgaatttcggtgtaaagaatgagtg-ggggaactctccttttataggcagag-ttcgtagcaaaaaacg 85  Q
    ||||||||||||||||||||||||||| |||| || || ||||||||||||||| |||| |||||| |||||||||    
T  33848312 tcaactgtgaatttcggtgtaaagaataagtgaggcgagctctccttttatagggagagtttcgtaacaaaaaacg 33848387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 19435838 - 19435901
Alignment:
Q  94 taagcaaacacgtttttgtttcaagttggatatatccgtaaaaatccggatacgcgtttaggatc 158  Q
    ||||||||||||||||||||| || ||||||||||||| |||  || |||||| ||||| |||||    
T  19435838 taagcaaacacgtttttgttttaa-ttggatatatccggaaacttctggatactcgttttggatc 19435901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 19571987 - 19572050
Alignment:
Q  94 taagcaaacacgtttttgtttcaagttggatatatccgtaaaaatccggatacgcgtttaggatc 158  Q
    ||||||||||||||||||||| || ||||||||||||| |||  || |||||| ||||| |||||    
T  19571987 taagcaaacacgtttttgttttaa-ttggatatatccggaaacttctggatactcgttttggatc 19572050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 7505 - 7607
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggata-tttttaagtcac 339  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||||||||||| |||||||  ||||| |||||||| |||||| | ||||||||||||    
T  7505 tgggtaccccaagggcacacccttggaggtcacactacccttatataaacactttctagttg--gtgtggctcaccaatgtgggacattttttaagtcac 7602  T
Q  340 acact 344  Q
    |||||    
T  7603 acact 7607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 2251 - 2353
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggata-tttttaagtcac 339  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||||| |||||||  ||||| |||||||| |||||| | ||||||||||||    
T  2251 tgggtaccccaagggcacacccttggaggtcacaatacccttatataaacactttctagttg--gtgtggctcaccaatgtgggacattttttaagtcac 2348  T
Q  340 acact 344  Q
    |||||    
T  2349 acact 2353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 7341 - 7434
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggg-gaactctccttttataggcagagttcgtagcaaaaaacgagtgactt 93  Q
    |||| |||||||| |||||| | |||||||||||||||||| |||| || |||||||||||||||  ||||||||| |  |||||||| |||||    
T  7341 cacaggaatcatcgactgtggaattcggtgtaaagaatgaggggggcgagctctccttttataggatgagttcgtaaccgaaaacgagagactt 7434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 344
Target Start/End: Complemental strand, 2589 - 2488
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||||| |||| ||||||||  |||| |||| ||| |||||| ||||||||||||||    
T  2589 tgggtaccccaagggcacacccttggaggtcactctacccttatataaatactttctagttgg--tgtggctcaacaatgtgggacatttttaagtcaca 2492  T
Q  341 cact 344  Q
    ||||    
T  2491 cact 2488  T

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Target: scaffold0132; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 344
Target Start/End: Complemental strand, 10549 - 10448
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||||| |||| ||||||||  |||| |||| ||| |||||| ||||||||||||||    
T  10549 tgggtaccccaagggcacacccttggaggtcactctacccttatataaatactttctagttgg--tgtggctcaacaatgtgggacatttttaagtcaca 10452  T
Q  341 cact 344  Q
    ||||    
T  10451 cact 10448  T

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Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 7805698 - 7805797
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| ||||||||||||| |  ||||||||||||||||| |||||||  | |||||| ||||| |||||| ||||||||||||||    
T  7805698 tgggtaccccaagggcacacccttggaggtcactcttcccttatataaacacttactagttg--gggtgactaaccaatgtgggacatttttaagtcaca 7805795  T

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Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 14374749 - 14374848
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| ||||||||||||| |  ||||||||||||||||| |||||||  | |||||| ||||| |||||| ||||||||||||||    
T  14374749 tgggtaccccaagggcacacccttggaggtcactcttcccttatataaacactttctagttg--gggtgactaaccaatgtgggacatttttaagtcaca 14374846  T

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Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 241 - 340
Target Start/End: Complemental strand, 13582150 - 13582053
Alignment:
Q  241 tgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctagttggtgtgtgactcaccaacgtgggatatttttaagtcaca 340  Q
    ||||||||||||||||||| ||||||||||||| |  ||||||||||||||||| |||||||  | |||||| ||||| |||||| ||||||||||||||    
T  13582150 tgggtaccccaagggcacacccttggaggtcactcttcccttatataaacacttactagttg--gggtgactaaccaatgtgggacatttttaagtcaca 13582053  T

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Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 31987371 - 31987430
Alignment:
Q  240 atgggtaccccaagggcacatccttggaggtcaccccacccttatataaacacttgctag 299  Q
    |||||||||||||||| |||||||||||||||||||  | ||||||||||||||| ||||    
T  31987371 atgggtaccccaagggtacatccttggaggtcaccctccgcttatataaacacttactag 31987430  T

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Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 31987020 - 31987101
Alignment:
Q  1 cacatgaatcatcaactgtgaatttcggtgtaaagaatgagtg-ggggaactctccttttataggcagagttcgtagcaaaa 81  Q
    |||| ||| ||||||||||||| ||||| ||||||||| |||| || || ||||||||||||||  |||||||||| |||||    
T  31987020 cacaagaaacatcaactgtgaacttcggcgtaaagaataagtgaggcgagctctccttttatagtgagagttcgtaacaaaa 31987101  T

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