View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11022_low_19 (Length: 390)
Name: NF11022_low_19
Description: NF11022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11022_low_19 |
 | |
|
| [»] scaffold0182 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 45 - 373
Target Start/End: Complemental strand, 21689903 - 21689575
Alignment:
| Q |
45 |
ttatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccag |
144 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| |||||||| | | || |
|
|
| T |
21689903 |
ttatcaattcactcttgttgttatctttccacaatagctcgagtacttcataaggaagttgattctctaacaaaagcacatccaccatcacaatagctag |
21689804 |
T |
|
| Q |
145 |
ttgattaaacttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagc |
244 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21689803 |
ttgatcaaccttaatatccataggccctggttcaacaagcctgtctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagc |
21689704 |
T |
|
| Q |
245 |
ttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgt |
344 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21689703 |
ttttcttcaagactatcaaagccttcgagagaatttccggtcaatgttaaaacatcgtcatcaaaatgacccttcagtttatcaatgttatcaacaatgt |
21689604 |
T |
|
| Q |
345 |
ttttgtgtagatccctctgaatgcttcca |
373 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21689603 |
ttttgtgtagatccctctgaatgcttcca |
21689575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 14 - 365
Target Start/End: Complemental strand, 21623714 - 21623363
Alignment:
| Q |
14 |
agatgactgccgaggaaaattctcatggtcattatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctcca |
113 |
Q |
| |
|
||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21623714 |
agatgacagccgaggaaatttttcatggtcattatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctcca |
21623615 |
T |
|
| Q |
114 |
acaaaagcacatccatcatcacaagaaccagttgattaaacttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaaga |
213 |
Q |
| |
|
|||||| |||||| |||||||||||| | |||||| || |||||||| ||| ||||||||||| |||| || || | |||| ||||| |||||||| |
|
|
| T |
21623614 |
acaaaaccacatcaatcatcacaagattccgttgatcaagcttaatattcatctgccctggttcatgaagcttggctgtatccatgatatgcagcaaaga |
21623515 |
T |
|
| Q |
214 |
gcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatga |
313 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||| || ||| |||||||||| ||||| |||| ||| || ||||||||||| ||| ||||||| |
|
|
| T |
21623514 |
acatccatccacgaacaacatccacgacagcttttctttaatgctaccaaagccttcaagagactttccggttaaagttaaaacatcgtcactaaaatga |
21623415 |
T |
|
| Q |
314 |
cccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaa |
365 |
Q |
| |
|
|||||||||| |||||| |||||| |||| || ||||| | |||| |||||| |
|
|
| T |
21623414 |
cccttcagttcatcaatattatcagcaatcttgttgtgcatatccttctgaa |
21623363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 45 - 354
Target Start/End: Complemental strand, 21628618 - 21628306
Alignment:
| Q |
45 |
ttatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccag |
144 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21628618 |
ttatcaattcattctcattgttatctttccacaatagcttgagtacttcataaggaagttgattctccaacaaaagcacatccatcatcacaagaaccag |
21628519 |
T |
|
| Q |
145 |
ttgattaaacttaatatccataggccctgg----ttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacga |
240 |
Q |
| |
|
||||| || ||||||||||||||||| ||| || ||||| | | ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
21628518 |
ttgatcaagcttaatatccataggccttgggtcattaaacaa-cgtaactttctccaagatataaagcaaagagcatccatccacgaacaacatccacga |
21628420 |
T |
|
| Q |
241 |
tagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaaca |
340 |
Q |
| |
|
|||||||||||||| | ||||||||| ||||| |||| || || |||||||||| || |||| |||||||||||| ||||||||||||| || |
|
|
| T |
21628419 |
cagcttttcttcaaggcatccaaagccttgaagagagtttcccgttaaatttaaaacatcgtcgctaaaacgacccttcagttcatcaatgttatcagca |
21628320 |
T |
|
| Q |
341 |
atgtttttgtgtag |
354 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
21628319 |
atctttttgtgtag |
21628306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 45 - 358
Target Start/End: Original strand, 21807820 - 21808136
Alignment:
| Q |
45 |
ttatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccag |
144 |
Q |
| |
|
||||||||||| ||| |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | |||| ||||||||| |
|
|
| T |
21807820 |
ttatcaattcaccctcattgttatcttcccacaatagcttaagtactttataaggcagttgattctccaacaaaagcacatccgttatcagaagaaccag |
21807919 |
T |
|
| Q |
145 |
ttgattaaacttaatatccataggccctggttcaacaagcc---tgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgat |
241 |
Q |
| |
|
||||| || ||||||||||| | ||||||| ||| ||| || || || |||||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
21807920 |
ttgatcaagcttaatatccacatgccctggctcatcaaaccacatgactgtctccaagatataaagcaaagagcatccatccacgaacaacatccatgac |
21808019 |
T |
|
| Q |
242 |
agcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaa |
341 |
Q |
| |
|
|||||||||||||| ||| |||||||||| ||||| | | ||| || ||||||||||| || |||||||||||||||||| ||| ||||||||| ||| |
|
|
| T |
21808020 |
agcttttcttcaaggctaccaaagccttcaagagactggccggttaaagttaaaacatcgtcgccaaaatgacccttcagttcatcgatgttatcagcaa |
21808119 |
T |
|
| Q |
342 |
tgtttttgtgtagatcc |
358 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
21808120 |
tctttttgtgtagatcc |
21808136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 45 - 373
Target Start/End: Complemental strand, 21682140 - 21681812
Alignment:
| Q |
45 |
ttatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccag |
144 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21682140 |
ttatcaattcactctcattgctatctttccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacatccatcatcacaagaaccag |
21682041 |
T |
|
| Q |
145 |
ttgattaaacttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagc |
244 |
Q |
| |
|
||||| || ||||| || ||| ||||||||||| |||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| |||| | |
|
|
| T |
21682040 |
ttgatcaaccttaacattcatgtgccctggttcataaagcatggttttctccaagatatgtagcaaagaacatccatccacgaacaacatccatgataac |
21681941 |
T |
|
| Q |
245 |
ttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgt |
344 |
Q |
| |
|
||||||||||| |||| | ||||||| ||||| | | ||| || ||||||||||| || |||||| ||||||| || ||||||||||||| |||| | |
|
|
| T |
21681940 |
ttttcttcaaggctatgatagccttcaagagactcgccggttaaagttaaaacatcgtcgctaaaatggcccttcaattcatcaatgttatcagcaattt |
21681841 |
T |
|
| Q |
345 |
ttttgtgtagatccctctgaatgcttcca |
373 |
Q |
| |
|
|||||| ||||||| | |||||||||||| |
|
|
| T |
21681840 |
ttttgtatagatccttttgaatgcttcca |
21681812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 45 - 357
Target Start/End: Complemental strand, 21785896 - 21785584
Alignment:
| Q |
45 |
ttatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccag |
144 |
Q |
| |
|
||||||||||| |||||| | |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21785896 |
ttatcaattcactctcgtcgctatctttccacaatagtttgaggacttcataaggaagttgattctccaacaaaagcacatccatcatcacaagaaccag |
21785797 |
T |
|
| Q |
145 |
ttgattaaacttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagc |
244 |
Q |
| |
|
||||| || |||||||| ||| |||||||| || |||| || ||||||||||||||| |||||||| ||||||||||| |||||||||||||| ||| |
|
|
| T |
21785796 |
ttgatcaaccttaatattcatttgccctggtacatgaagcttggctttctccaagatatgtagcaaagaacatccatccacaaacaacatccacgacagc |
21785697 |
T |
|
| Q |
245 |
ttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgt |
344 |
Q |
| |
|
||||||||||| ||| ||||| |||| ||||| | | ||| || ||||||||||| || ||||||||||||||||| || ||||||||| |||| | |
|
|
| T |
21785696 |
ttttcttcaaggctaccaaagtcttcaagagactggccggttaaagttaaaacatcatcgctaaaatgacccttcagttcattaatgttatcggcaatct |
21785597 |
T |
|
| Q |
345 |
ttttgtgtagatc |
357 |
Q |
| |
|
||||||||||||| |
|
|
| T |
21785596 |
ttttgtgtagatc |
21785584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 67 - 358
Target Start/End: Complemental strand, 21714651 - 21714360
Alignment:
| Q |
67 |
atctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccagttgattaaacttaatatccata |
166 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| || ||| |||| ||| |
|
|
| T |
21714651 |
atctttccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacatccatcattacaagaacaagttgatcaaccttgatattcatt |
21714552 |
T |
|
| Q |
167 |
ggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagc |
266 |
Q |
| |
|
||||||||||| ||||| || || |||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
21714551 |
tgccctggttcatcaagcttggctctctccaagatatgaagcaaagaacatccatccacgaacaacatccacgatagcttttcttcaaggctaccaaagc |
21714452 |
T |
|
| Q |
267 |
cttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatcc |
358 |
Q |
| |
|
|||| ||||| ||||| | | ||||||||| | ||||||||||||||||||| |||||||||||| |||| ||||||||||||||| |
|
|
| T |
21714451 |
cttcaagagaccaactggttgaagctaaaacatcgttgtcaaaatgacccttcagttcatcaatgttatctgcaatctttttgtgtagatcc |
21714360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 67 - 358
Target Start/End: Complemental strand, 21772429 - 21772138
Alignment:
| Q |
67 |
atctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccagttgattaaacttaatatccata |
166 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||| |
|
|
| T |
21772429 |
atctttccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacatccatcatcacaagaaccagttgatcaaccttaatattcatg |
21772330 |
T |
|
| Q |
167 |
ggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagc |
266 |
Q |
| |
|
||| ||||||| ||| | |||||||||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||||||| ||| ||||| |
|
|
| T |
21772329 |
tgccatggttcattaagattcgctttctccaagatatacagcaaagaacatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagc |
21772230 |
T |
|
| Q |
267 |
cttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatcc |
358 |
Q |
| |
|
|| | ||||| |||||| | ||||||||||| || ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |
|
|
| T |
21772229 |
ctgcaagagaccatctggttgaagttaaaacatcatcgtcaaaatgacccttcagttcatcaatgttatcagcaatctttttgtgtagatcc |
21772138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 45 - 357
Target Start/End: Complemental strand, 21992672 - 21992360
Alignment:
| Q |
45 |
ttatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccag |
144 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
21992672 |
ttatcaattcactctcattgttatctttccacaatagcttgagtactacgtaaggaagttgattctccaacagaagcacatccatcatcacaagaaccag |
21992573 |
T |
|
| Q |
145 |
ttgattaaacttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagc |
244 |
Q |
| |
|
||||| || ||||||| ||| |||| |||||| ||||| || ||||||| |||||||| | |||||| ||||||||||| ||||||||||| || ||| |
|
|
| T |
21992572 |
ttgatcaactttaatattcatgtgcccaggttcatcaagcttggctttctctaagatatacaacaaagaacatccatccacgaacaacatccatgacagc |
21992473 |
T |
|
| Q |
245 |
ttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgt |
344 |
Q |
| |
|
|||||||| || || |||||||||| ||||| |||| | || ||||||||||| ||| ||||||||||||||||| |||||||||||| | ||| | |
|
|
| T |
21992472 |
ttttcttcgaggcttccaaagccttcaagagactttccagctaaagttaaaacatcgtcactaaaatgacccttcagttcatcaatgttatcgataatct |
21992373 |
T |
|
| Q |
345 |
ttttgtgtagatc |
357 |
Q |
| |
|
||||||||||||| |
|
|
| T |
21992372 |
ttttgtgtagatc |
21992360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 64 - 358
Target Start/End: Complemental strand, 21788700 - 21788406
Alignment:
| Q |
64 |
gttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccagttgattaaacttaatatcc |
163 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| | |
|
|
| T |
21788700 |
gttatctttccacaatagcttgagtactacgtaaggaagttgattctccaacagaagcacatccatcatcacaagaaccagttgatcaactttaatattc |
21788601 |
T |
|
| Q |
164 |
ataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagactatcaa |
263 |
Q |
| |
|
|| |||| |||||| ||||| || ||||||| |||||||| | |||||| ||||||||||| |||||||||||||| ||||||||||| || || ||| |
|
|
| T |
21788600 |
atgtgcccaggttcatcaagcttggctttctctaagatatacaacaaagaacatccatccacgaacaacatccacgacagcttttcttcgaggcttccaa |
21788501 |
T |
|
| Q |
264 |
agccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatcc |
358 |
Q |
| |
|
||||||| ||||| || | || || ||||||||||| || |||||||||||||||||| |||||||||||| |||| |||||||| |||||| |
|
|
| T |
21788500 |
agccttcaagagacttgccagttaaagttaaaacatcgtcgccaaaatgacccttcagttcatcaatgttatctgcaatctttttgtgcagatcc |
21788406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 46 - 358
Target Start/End: Complemental strand, 21726385 - 21726073
Alignment:
| Q |
46 |
tatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccagt |
145 |
Q |
| |
|
||||||| || |||||| | |||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21726385 |
tatcaatccactctcgtcttcatctgtccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacatccatcatcacaagaaccagt |
21726286 |
T |
|
| Q |
146 |
tgattaaacttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagct |
245 |
Q |
| |
|
|||| || | |||||| ||| ||| ||||| | ||| |||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||| |
|
|
| T |
21726285 |
tgatcaaccctaatattcatgtgccatggtttattaagatccgctttctccaagatatacagcaaagaacatccatccacgaacaacatccacgacagct |
21726186 |
T |
|
| Q |
246 |
tttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgtt |
345 |
Q |
| |
|
|||||||||| ||| ||||||| | ||||| |||||| | | ||||||||| || ||||||||||||||||||| ||||||||||||| |||| || |
|
|
| T |
21726185 |
tttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcgtcgtcaaaatgacccttcagttcatcaatgttatcagcaatctt |
21726086 |
T |
|
| Q |
346 |
tttgtgtagatcc |
358 |
Q |
| |
|
||||||||||||| |
|
|
| T |
21726085 |
tttgtgtagatcc |
21726073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 67 - 359
Target Start/End: Complemental strand, 21664575 - 21664274
Alignment:
| Q |
67 |
atctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccagttgattaaacttaatatccata |
166 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
21664575 |
atctttccacaatagcttgagtacttgataaggtagttgattctccaacaaaagcacatccatcatcacaagaaccagttgatcaaccttaatatccata |
21664476 |
T |
|
| Q |
167 |
ggccctggttcaacaagcc---tgc--ctttc-tccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagactat |
260 |
Q |
| |
|
||| |||| ||| | | || | | | | | |||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| || |
|
|
| T |
21664475 |
ggctctgggtcatccatccacgtacaacatccatccaagatataaagcaaagagcatccatccacgaacaatatccacgacagcttttcttcaaggcttc |
21664376 |
T |
|
| Q |
261 |
caaagccttcgagagaatttctggtcaatgttaaa---acatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatc |
357 |
Q |
| |
|
|||||||||| ||||| || | ||| || |||||| ||||| || ||||||||||||||||||| ||| |||||||||| ||| |||||||||||||| |
|
|
| T |
21664375 |
caaagccttcaagagacttgccggttaaagttaaaattacatcatcgtcaaaatgacccttcagttcatcgatgttatcaaaaatctttttgtgtagatc |
21664276 |
T |
|
| Q |
358 |
cc |
359 |
Q |
| |
|
|| |
|
|
| T |
21664275 |
cc |
21664274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 44 - 351
Target Start/End: Complemental strand, 15714108 - 15713807
Alignment:
| Q |
44 |
attatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaacca |
143 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
15714108 |
attatcaactcactctcgttgttatctttccacaatagcttgagtacttcataaggaagttgattctccaacaaaagcacatccattatcacaagatcca |
15714009 |
T |
|
| Q |
144 |
gttgattaaacttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatag |
243 |
Q |
| |
|
|||||| || |||||||| || ||||||| | ||||| || || |||||||||| |||||||||||||||||||| ||||||||||| || || |
|
|
| T |
15714008 |
gttgatcaagcttaatatttatgggccctgcgtgaacaa---tg---ttatccaagatatgcagcaaagagcatccatccacgaacaacatccatgacag |
15713915 |
T |
|
| Q |
244 |
cttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatg |
343 |
Q |
| |
|
||||||||| || ||| |||| |||| || || |||| ||| || ||||||||||| ||| |||||||| |||||||| ||||||||||||| |||| |
|
|
| T |
15713914 |
cttttcttctaggctaccaaatccttgaagtgactttccggttaaagttaaaacatcgtcactaaaatgacacttcagttcatcaatgttatcagcaatc |
15713815 |
T |
|
| Q |
344 |
tttttgtg |
351 |
Q |
| |
|
|||||||| |
|
|
| T |
15713814 |
tttttgtg |
15713807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 25 - 372
Target Start/End: Complemental strand, 21647257 - 21646906
Alignment:
| Q |
25 |
gaggaaaattctcatggtcattatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcaca |
124 |
Q |
| |
|
||||||| || ||||||| |||||||||||||||| |||||||||||| | ||||| ||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
21647257 |
gaggaaatttttcatggtatttatcaattcattctcattgttatctttcaataatagtttgagtactatgtaagggagttgattctccaacaaaagcaca |
21647158 |
T |
|
| Q |
125 |
tccatcatcacaagaaccagttgattaaacttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatcc----a |
220 |
Q |
| |
|
|||||||||||||||||||||| || || |||||||| ||| ||||||||||| |||| || ||||||| ||||||| |||||||| ||||| | |
|
|
| T |
21647157 |
tccatcatcacaagaaccagtttatcaaccttaatattcatctgccctggttcatgaagcttggctttctctaagatatgcagcaaagaacatccatata |
21647058 |
T |
|
| Q |
221 |
tccaccaacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttca |
320 |
Q |
| |
|
||||| ||||| |||||||| | |||||||||||| ||| ||||||| ||||| || | |||||| |||||||| || || |||||||||||||| |
|
|
| T |
21647057 |
tccacgaacaatatccacgacaacttttcttcaaggctacggaagcctttaagagacttgccggtcaaagttaaaacgtcgtcgctaaaatgacccttca |
21646958 |
T |
|
| Q |
321 |
gtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttcc |
372 |
Q |
| |
|
||| |||||||||||| ||||| ||||||||||||||| ||| ||| ||||| |
|
|
| T |
21646957 |
gttcatcaatgttatctacaatctttttgtgtagatccttcttaattcttcc |
21646906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 45 - 357
Target Start/End: Complemental strand, 21746016 - 21745710
Alignment:
| Q |
45 |
ttatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccag |
144 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |
|
|
| T |
21746016 |
ttatcaattcactctcgttgttatcttttcacaatagctagagtacttcataaggcagttgattctccaacaaaagtacatcgatcatcacaagaataac |
21745917 |
T |
|
| Q |
145 |
ttgattaaacttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagc |
244 |
Q |
| |
|
| ||| || |||||||| ||| | ||| | ||||| || || |||||||||| |||||||| |||||||| || || ||||||||||| ||| |
|
|
| T |
21745916 |
tagatcaagcttaatattcatgtctcgtgggtgaacaa---tg---ttatccaagatatggagcaaagaacatccatctacgaataacatccacgacagc |
21745823 |
T |
|
| Q |
245 |
ttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgt |
344 |
Q |
| |
|
||||||||||| | |||||||||| |||||||||| || || ||||||||||| || |||| |||||||||||| |||||||||||||||||| | |
|
|
| T |
21745822 |
ttttcttcaaggcattcaaagccttgaagagaatttccagttaaagttaaaacatcgtcgctaaaacgacccttcagttcatcaatgttatcaacaatct |
21745723 |
T |
|
| Q |
345 |
ttttgtgtagatc |
357 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
21745722 |
ttttgtgcagatc |
21745710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 45 - 354
Target Start/End: Complemental strand, 21764531 - 21764243
Alignment:
| Q |
45 |
ttatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccag |
144 |
Q |
| |
|
||||||||||| ||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21764531 |
ttatcaattcactctcgttatt---tttccacaatagcttgagtacttcgtaaggaagttgattctccaacaaaagcacatccatcatcacaagaaccag |
21764435 |
T |
|
| Q |
145 |
ttgattaaacttaatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagc |
244 |
Q |
| |
|
|||| || |||||| | ||| ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| | | |
|
|
| T |
21764434 |
ttgaccaaccttaatcttcatgtgccct------------------ttctccaagagataaagcaaagagcatccatccacgaacaacatccacgacaac |
21764353 |
T |
|
| Q |
245 |
ttttcttcaagactatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgt |
344 |
Q |
| |
|
||||||||||| |||| ||||||||| ||||| |||| || || ||||||||||| || |||| |||||||||||| ||| ||||||||| |||| | |
|
|
| T |
21764352 |
ttttcttcaaggctatgaaagccttcaagagactttccagttaaagttaaaacatcatcgctaaaacgacccttcagttcatcgatgttatcagcaatct |
21764253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 358
Target Start/End: Complemental strand, 21652538 - 21652246
Alignment:
| Q |
57 |
tctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccagttgattaaactt |
156 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||| || ||| |
|
|
| T |
21652538 |
tctcgttgtcgtctttccacaaaagcttgagtacttgataaggaagttgattttccaacaaaagcacatccatcatca---------gttgatcaacctt |
21652448 |
T |
|
| Q |
157 |
aatatccataggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaaga |
256 |
Q |
| |
|
||||| ||| |||||| |||| ||| || ||||||||||||||| ||||| || ||||||||||| |||||||||||||| | |||||||||||| |
|
|
| T |
21652447 |
aatattcatgtgccctgcttcatcaacgttggctttctccaagatatgcagcaacgaacatccatccacgaacaacatccacgacaacttttcttcaagg |
21652348 |
T |
|
| Q |
257 |
ctatcaaagccttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagat |
356 |
Q |
| |
|
|||||||||||||| ||||| || | || || ||||||||||| || |||||||||||| |||| | ||| ||||| |||| ||||||||| ||| |
|
|
| T |
21652347 |
ctatcaaagccttcaagagacttgccagttaaagttaaaacatcgtcgctaaaatgaccctttagttcgttaattttatcggcaatctttttgtgtcgat |
21652248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 67 - 354
Target Start/End: Complemental strand, 21705105 - 21704824
Alignment:
| Q |
67 |
atctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccagttgattaaacttaatatccata |
166 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||| || |||||||| ||| |
|
|
| T |
21705105 |
atctttccacaaaagcttgagtacttcataaggcagttgattctccaacaaaagcacatcctccctcacaagagccagttgatcaaccttaatattcatc |
21705006 |
T |
|
| Q |
167 |
ggccctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagc |
266 |
Q |
| |
|
||| | | | | || || || |||||||||| |||||||| |||||||||| ||||| |||||||| |||||||| ||||| | ||||||| |
|
|
| T |
21705005 |
ggcagtaggtacataa---tg---ttatccaagatatggagcaaagaacatccatccatgaacaatatccacgacagcttttcatcaaggcactcaaagc |
21704912 |
T |
|
| Q |
267 |
cttcgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtag |
354 |
Q |
| |
|
||| ||||| |||| ||| | ||||||||||| || |||| |||||||||||| |||||||||||| |||| ||||||||||| |
|
|
| T |
21704911 |
cttgaagagagtttccggttagagttaaaacatcatcgctaaaacgacccttcagttcatcaatgttatctgcaatctttttgtgtag |
21704824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 21792457 - 21792388
Alignment:
| Q |
68 |
tctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaa |
137 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21792457 |
tctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaa |
21792388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 370
Target Start/End: Complemental strand, 21792356 - 21792176
Alignment:
| Q |
190 |
tttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttctggtcaat |
289 |
Q |
| |
|
|||||||||||||| | |||||| ||||||||||| ||||| ||||| || ||||||||||| || ||| ||||||| || ||||| || | ||| || |
|
|
| T |
21792356 |
tttctccaagatatgcaacaaagaacatccatccacgaacaatatccatgacagcttttcttcgaggctaccaaagccgtcaagagacttgcgggttaaa |
21792257 |
T |
|
| Q |
290 |
gttaaaacatcttcatcaaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgctt |
370 |
Q |
| |
|
||||||||||| || |||| || ||||||| ||||||||||||| |||| |||||||| ||||| || |||||||| |
|
|
| T |
21792256 |
gttaaaacatcatcgctaaaacgatccttcagcgtatcaatgttatcggcaatctttttgtgcagatctttcagaatgctt |
21792176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 21656941 - 21656895
Alignment:
| Q |
45 |
ttatcaattcattctcgttgttatctttccacaatagcttgagtact |
91 |
Q |
| |
|
||||||||||| ||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
21656941 |
ttatcaattcactcttgttgtcatctttccacaatagcttgagtact |
21656895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 70 - 320
Target Start/End: Complemental strand, 25838 - 25588
Alignment:
| Q |
70 |
tttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatccatcatcacaagaaccagttgattaaacttaatatccataggc |
169 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||| ||||||||||| ||||||| || |||||||| ||| | |
|
|
| T |
25838 |
tttccacaatagcttgagtacttcataaggaagttgattttccaacaaaaccacatccaccatcacaagaaaaagttgatcaaccttaatattcattttc |
25739 |
T |
|
| Q |
170 |
cctggttcaacaagcctgcctttctccaagatataaagcaaagagcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagcctt |
269 |
Q |
| |
|
||||| | | | | ||| | ||||||||||||| |||||||| ||||||||||| ||||||||| |||| |||||||||||||| || ||||||||| |
|
|
| T |
25738 |
cctgggttattacgtctggcattctccaagatatgtagcaaagaacatccatccacgaacaacatcaacgacagcttttcttcaagggtaccaaagcctt |
25639 |
T |
|
| Q |
270 |
cgagagaatttctggtcaatgttaaaacatcttcatcaaaatgacccttca |
320 |
Q |
| |
|
| ||||| ||| | || || ||||||||||| || |||||||||||||| |
|
|
| T |
25638 |
caagagactttttagttaaagttaaaacatcctcgctaaaatgacccttca |
25588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 18192060 - 18192122
Alignment:
| Q |
208 |
caaagagcatccatccaccaacaacatccacgatagcttttcttcaagactatcaaagccttc |
270 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||| |
|
|
| T |
18192060 |
caaagaacatccatccacaaacaacatccatgatagcttttcttccaagttatcaaagccttc |
18192122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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