View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11022_low_21 (Length: 365)

Name: NF11022_low_21
Description: NF11022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11022_low_21
NF11022_low_21
[»] chr8 (34 HSPs)
chr8 (14-290)||(8726853-8727121)
chr8 (14-290)||(39080974-39081242)
chr8 (1-290)||(17279884-17280166)
chr8 (1-290)||(17880620-17880903)
chr8 (5-289)||(33466043-33466319)
chr8 (4-290)||(37155406-37155686)
chr8 (22-184)||(22476247-22476402)
chr8 (22-184)||(24091974-24092128)
chr8 (33-134)||(22874206-22874307)
chr8 (1-188)||(1683973-1684150)
chr8 (22-131)||(33977075-33977184)
chr8 (22-184)||(11221260-11221409)
chr8 (1-131)||(9996494-9996625)
chr8 (22-185)||(13660359-13660513)
chr8 (22-185)||(13719002-13719156)
chr8 (1-77)||(23249730-23249806)
chr8 (22-131)||(23541443-23541553)
chr8 (22-130)||(12814626-12814734)
chr8 (49-184)||(22485177-22485305)
chr8 (1-213)||(23864426-23864631)
chr8 (32-130)||(25240432-25240531)
chr8 (295-349)||(8734332-8734386)
chr8 (46-184)||(27925434-27925564)
chr8 (74-184)||(45136184-45136286)
chr8 (21-104)||(33961777-33961860)
chr8 (22-72)||(1562459-1562509)
chr8 (26-104)||(20254943-20255021)
chr8 (26-131)||(24384582-24384687)
chr8 (22-70)||(45133681-45133729)
chr8 (31-104)||(24850493-24850565)
chr8 (1-73)||(12240233-12240306)
chr8 (1-63)||(24482313-24482376)
chr8 (136-184)||(12240365-12240413)
chr8 (141-184)||(23249863-23249906)
[»] chr1 (29 HSPs)
chr1 (9-290)||(45599211-45599484)
chr1 (1-290)||(40313105-40313386)
chr1 (1-290)||(33062381-33062662)
chr1 (16-284)||(17012013-17012275)
chr1 (1-290)||(52436700-52436983)
chr1 (1-257)||(17038243-17038494)
chr1 (22-184)||(26972386-26972542)
chr1 (22-184)||(4246052-4246207)
chr1 (22-184)||(11667850-11668004)
chr1 (34-184)||(20841252-20841394)
chr1 (22-130)||(17851406-17851514)
chr1 (24-184)||(1973332-1973484)
chr1 (22-182)||(23477924-23478076)
chr1 (22-128)||(12753078-12753184)
chr1 (22-184)||(14745770-14745924)
chr1 (33-131)||(13165422-13165521)
chr1 (21-130)||(47941373-47941483)
chr1 (1-184)||(17379610-17379786)
chr1 (1-184)||(17355818-17355994)
chr1 (26-130)||(51472126-51472230)
chr1 (1-68)||(18390200-18390268)
chr1 (22-65)||(20859641-20859684)
chr1 (1-63)||(49086692-49086755)
chr1 (3-63)||(50057518-50057579)
chr1 (22-78)||(15804196-15804252)
chr1 (145-255)||(10340075-10340184)
chr1 (22-71)||(10340249-10340298)
chr1 (22-77)||(8281937-8281992)
chr1 (22-68)||(41330897-41330943)
[»] chr7 (76 HSPs)
chr7 (1-284)||(48797506-48797781)
chr7 (1-290)||(3290564-3290847)
chr7 (1-278)||(7620076-7620347)
chr7 (1-290)||(14975428-14975711)
chr7 (1-278)||(14984667-14984938)
chr7 (1-290)||(15404904-15405187)
chr7 (1-278)||(15414278-15414549)
chr7 (1-290)||(11628635-11628915)
chr7 (1-214)||(42782751-42782957)
chr7 (1-183)||(30226080-30226256)
chr7 (1-257)||(9564252-9564503)
chr7 (1-232)||(4794527-4794751)
chr7 (1-220)||(11560457-11560668)
chr7 (1-184)||(13455099-13455275)
chr7 (22-184)||(4458756-4458911)
chr7 (1-232)||(9566901-9567122)
chr7 (22-131)||(11521442-11521552)
chr7 (22-127)||(10658400-10658505)
chr7 (22-131)||(14926664-14926773)
chr7 (22-131)||(15350130-15350239)
chr7 (1-128)||(15436044-15436172)
chr7 (23-184)||(42636265-42636418)
chr7 (1-131)||(15506263-15506394)
chr7 (22-125)||(20991559-20991662)
chr7 (22-131)||(16207913-16208023)
chr7 (22-184)||(29546125-29546279)
chr7 (22-184)||(645150-645305)
chr7 (22-182)||(10279832-10279983)
chr7 (22-184)||(11588481-11588636)
chr7 (40-182)||(11998914-11999049)
chr7 (22-131)||(16436791-16436900)
chr7 (33-184)||(14165193-14165337)
chr7 (1-65)||(2076501-2076565)
chr7 (1-65)||(2082920-2082984)
chr7 (1-78)||(23174966-23175044)
chr7 (1-78)||(26133000-26133078)
chr7 (135-253)||(24049572-24049691)
chr7 (23-130)||(7586563-7586670)
chr7 (37-127)||(12325845-12325936)
chr7 (1-77)||(24813920-24813997)
chr7 (22-184)||(9894054-9894208)
chr7 (1-70)||(31269148-31269218)
chr7 (43-127)||(20925138-20925222)
chr7 (1-72)||(23057201-23057273)
chr7 (22-71)||(7508452-7508501)
chr7 (1-77)||(15708167-15708243)
chr7 (22-95)||(23082842-23082915)
chr7 (22-184)||(23579941-23580095)
chr7 (22-78)||(10251457-10251513)
chr7 (22-70)||(10309583-10309631)
chr7 (22-70)||(20596918-20596966)
chr7 (33-77)||(24902134-24902178)
chr7 (25-184)||(20588695-20588846)
chr7 (24-78)||(6045340-6045393)
chr7 (31-222)||(10038677-10038861)
chr7 (1-63)||(12505702-12505766)
chr7 (35-181)||(23956907-23957045)
chr7 (1-104)||(26195518-26195620)
chr7 (1-59)||(4547851-4547909)
chr7 (1-62)||(10260231-10260293)
chr7 (22-72)||(11407041-11407091)
chr7 (22-68)||(19353147-19353193)
chr7 (22-104)||(21260532-21260614)
chr7 (138-184)||(31269044-31269090)
chr7 (22-71)||(14687384-14687433)
chr7 (135-184)||(23057328-23057377)
chr7 (1-63)||(12484272-12484336)
chr7 (1-63)||(5299142-5299205)
chr7 (141-184)||(7508562-7508605)
chr7 (1-63)||(9732836-9732899)
chr7 (141-184)||(23296631-23296674)
chr7 (145-184)||(26132903-26132942)
chr7 (138-184)||(14687492-14687538)
chr7 (142-184)||(24902234-24902276)
chr7 (136-184)||(10660986-10661034)
chr7 (135-183)||(11406938-11406986)
[»] chr3 (53 HSPs)
chr3 (1-290)||(8749035-8749316)
chr3 (1-290)||(9036703-9036984)
chr3 (1-232)||(9031321-9031544)
chr3 (1-213)||(13917839-13918041)
chr3 (25-184)||(17702426-17702578)
chr3 (22-131)||(295477-295586)
chr3 (1-214)||(7479096-7479299)
chr3 (1-257)||(13913787-13914038)
chr3 (1-184)||(6580854-6581030)
chr3 (22-131)||(18547665-18547775)
chr3 (22-184)||(13790696-13790851)
chr3 (22-184)||(15635860-15636015)
chr3 (22-184)||(28051153-28051307)
chr3 (21-131)||(8224854-8224966)
chr3 (1-184)||(18064193-18064369)
chr3 (1-179)||(7495921-7496090)
chr3 (22-131)||(17042786-17042895)
chr3 (22-184)||(23954544-23954699)
chr3 (22-184)||(24195541-24195695)
chr3 (22-187)||(11558308-11558460)
chr3 (22-187)||(11567577-11567729)
chr3 (1-131)||(11656017-11656148)
chr3 (1-131)||(18034928-18035059)
chr3 (1-127)||(20748200-20748326)
chr3 (34-131)||(19633915-19634012)
chr3 (40-182)||(44452515-44452650)
chr3 (1-127)||(12054485-12054610)
chr3 (22-131)||(13524714-13524823)
chr3 (1-131)||(18476926-18477055)
chr3 (22-97)||(19531950-19532025)
chr3 (35-184)||(21718913-21719054)
chr3 (33-118)||(1919281-1919367)
chr3 (22-130)||(31649708-31649814)
chr3 (22-95)||(15686226-15686299)
chr3 (22-104)||(3552274-3552355)
chr3 (1-62)||(10082375-10082437)
chr3 (7-63)||(20976090-20976147)
chr3 (1-63)||(8531387-8531450)
chr3 (1-63)||(10189299-10189362)
chr3 (22-72)||(980456-980506)
chr3 (135-184)||(215333-215382)
chr3 (22-78)||(21094787-21094842)
chr3 (1-71)||(14406722-14406793)
chr3 (26-257)||(286807-287030)
chr3 (135-184)||(14406616-14406665)
chr3 (1-63)||(8147641-8147704)
chr3 (143-255)||(21094619-21094730)
chr3 (22-71)||(3445098-3445146)
chr3 (91-131)||(18483403-18483444)
chr3 (1-38)||(40199885-40199922)
chr3 (1-45)||(42243786-42243831)
chr3 (12-63)||(20962162-20962214)
chr3 (60-127)||(21254029-21254097)
[»] chr5 (36 HSPs)
chr5 (1-290)||(7897796-7898078)
chr5 (1-290)||(17920666-17920947)
chr5 (1-290)||(20498033-20498317)
chr5 (1-261)||(26183144-26183398)
chr5 (1-259)||(20740849-20741100)
chr5 (1-184)||(20845782-20845958)
chr5 (1-122)||(22130877-22130997)
chr5 (22-184)||(22404749-22404904)
chr5 (22-131)||(26036827-26036936)
chr5 (22-184)||(26329202-26329356)
chr5 (22-184)||(30605679-30605833)
chr5 (26-184)||(24189883-24190034)
chr5 (22-131)||(23420594-23420704)
chr5 (22-131)||(25105453-25105563)
chr5 (22-131)||(25164546-25164656)
chr5 (22-184)||(13734961-13735116)
chr5 (22-259)||(13941912-13942140)
chr5 (38-131)||(22246384-22246478)
chr5 (22-184)||(23623894-23624048)
chr5 (1-184)||(13338587-13338762)
chr5 (22-184)||(18221127-18221281)
chr5 (1-65)||(11204717-11204781)
chr5 (4-184)||(22184586-22184758)
chr5 (44-131)||(22252074-22252162)
chr5 (22-184)||(20714724-20714879)
chr5 (1-63)||(24394627-24394690)
chr5 (24-77)||(24117614-24117667)
chr5 (31-184)||(9522561-9522705)
chr5 (142-232)||(22130790-22130879)
chr5 (3-63)||(15116789-15116850)
chr5 (1-72)||(17661503-17661575)
chr5 (143-184)||(9422505-9422546)
chr5 (135-184)||(22979868-22979917)
chr5 (36-104)||(20127026-20127093)
chr5 (40-83)||(9422549-9422592)
chr5 (1-72)||(22979740-22979811)
[»] chr4 (41 HSPs)
chr4 (1-290)||(25354517-25354799)
chr4 (1-289)||(23541239-23541520)
chr4 (1-284)||(24143130-24143406)
chr4 (1-290)||(19894693-19894967)
chr4 (1-289)||(22554965-22555249)
chr4 (13-284)||(11325031-11325297)
chr4 (1-131)||(46741783-46741913)
chr4 (1-184)||(21478103-21478279)
chr4 (1-220)||(11905090-11905299)
chr4 (22-184)||(25116840-25116997)
chr4 (22-131)||(16383907-16384017)
chr4 (34-184)||(23400182-23400325)
chr4 (153-290)||(46739146-46739278)
chr4 (22-184)||(9068962-9069116)
chr4 (22-184)||(33898976-33899131)
chr4 (23-130)||(18618150-18618258)
chr4 (28-131)||(28019327-28019431)
chr4 (22-128)||(15700347-15700454)
chr4 (22-131)||(10190903-10191013)
chr4 (1-184)||(10721979-10722154)
chr4 (1-184)||(10935748-10935923)
chr4 (22-184)||(10724276-10724430)
chr4 (22-184)||(10938045-10938199)
chr4 (22-130)||(13399338-13399446)
chr4 (1-184)||(8163777-8163956)
chr4 (30-184)||(19659463-19659610)
chr4 (22-131)||(33745980-33746089)
chr4 (22-131)||(15162521-15162630)
chr4 (36-123)||(19183722-19183809)
chr4 (34-184)||(10198239-10198381)
chr4 (1-75)||(33737978-33738053)
chr4 (22-104)||(32861664-32861746)
chr4 (22-131)||(50907868-50907977)
chr4 (3-63)||(13268843-13268904)
chr4 (1-63)||(11865215-11865278)
chr4 (32-95)||(41785461-41785524)
chr4 (22-99)||(16655405-16655481)
chr4 (3-63)||(17871604-17871665)
chr4 (22-181)||(2679866-2680013)
chr4 (1-63)||(24608701-24608764)
chr4 (1-64)||(11289438-11289501)
[»] chr6 (56 HSPs)
chr6 (1-290)||(16137462-16137745)
chr6 (1-290)||(19215949-19216231)
chr6 (1-290)||(15038343-15038624)
chr6 (1-278)||(15003055-15003326)
chr6 (1-278)||(9384609-9384879)
chr6 (1-289)||(12444604-12444883)
chr6 (2-222)||(20003133-20003346)
chr6 (1-188)||(16309342-16309520)
chr6 (1-184)||(20558297-20558473)
chr6 (22-184)||(17855211-17855366)
chr6 (22-184)||(20470191-20470345)
chr6 (22-184)||(9281696-9281851)
chr6 (22-184)||(33665810-33665965)
chr6 (1-130)||(15007370-15007499)
chr6 (22-184)||(13195340-13195495)
chr6 (22-184)||(25805470-25805624)
chr6 (22-128)||(15897710-15897816)
chr6 (1-131)||(34657184-34657315)
chr6 (1-131)||(24501819-24501950)
chr6 (29-130)||(21723442-21723543)
chr6 (34-184)||(29254904-29255046)
chr6 (22-184)||(17864413-17864567)
chr6 (26-134)||(32449271-32449379)
chr6 (22-214)||(23882652-23882836)
chr6 (22-184)||(14258927-14259082)
chr6 (22-127)||(20989802-20989907)
chr6 (1-184)||(28623524-28623699)
chr6 (33-184)||(25964722-25964866)
chr6 (33-184)||(25969369-25969513)
chr6 (33-184)||(25973809-25973953)
chr6 (22-131)||(12039715-12039824)
chr6 (22-180)||(17234608-17234759)
chr6 (47-130)||(21706383-21706467)
chr6 (22-255)||(26965488-26965713)
chr6 (22-128)||(17527920-17528027)
chr6 (37-130)||(13870399-13870493)
chr6 (42-184)||(19171452-19171587)
chr6 (156-278)||(32452131-32452252)
chr6 (135-264)||(21323181-21323311)
chr6 (33-205)||(3567389-3567553)
chr6 (22-131)||(8465705-8465810)
chr6 (1-87)||(25782806-25782893)
chr6 (1-184)||(20764982-20765158)
chr6 (1-63)||(22885237-22885300)
chr6 (139-184)||(18152694-18152739)
chr6 (31-78)||(21323360-21323407)
chr6 (1-63)||(3904767-3904829)
chr6 (22-72)||(18152798-18152848)
chr6 (22-68)||(30424952-30424998)
chr6 (35-130)||(11960511-11960608)
chr6 (4-63)||(13553349-13553409)
chr6 (1-63)||(1103411-1103473)
chr6 (195-289)||(15004177-15004272)
chr6 (1-63)||(22903195-22903258)
chr6 (63-128)||(19894656-19894722)
chr6 (3-63)||(28045031-28045092)
[»] chr2 (36 HSPs)
chr2 (1-289)||(29566008-29566288)
chr2 (1-290)||(18765671-18765954)
chr2 (1-265)||(13314872-13315130)
chr2 (29-184)||(26860284-26860432)
chr2 (25-184)||(23758645-23758797)
chr2 (22-184)||(36398782-36398937)
chr2 (22-131)||(19466556-19466665)
chr2 (22-184)||(24790146-24790301)
chr2 (23-184)||(12910507-12910661)
chr2 (1-109)||(15328304-15328412)
chr2 (47-184)||(22610934-22611064)
chr2 (24-127)||(21530404-21530507)
chr2 (22-182)||(20649547-20649699)
chr2 (22-133)||(25347210-25347321)
chr2 (22-184)||(27111097-27111250)
chr2 (22-255)||(21250116-21250339)
chr2 (29-104)||(24317871-24317945)
chr2 (1-78)||(31587471-31587548)
chr2 (1-72)||(12952467-12952539)
chr2 (1-63)||(31067586-31067649)
chr2 (22-72)||(19198371-19198420)
chr2 (22-72)||(24283621-24283671)
chr2 (3-63)||(17395553-17395614)
chr2 (135-184)||(27107632-27107681)
chr2 (7-60)||(25867173-25867227)
chr2 (3-63)||(17363514-17363575)
chr2 (3-63)||(20378326-20378387)
chr2 (31-184)||(20475264-20475409)
chr2 (32-131)||(24317222-24317321)
chr2 (1-63)||(45550036-45550098)
chr2 (26-72)||(20476669-20476715)
chr2 (135-184)||(12952594-12952643)
chr2 (7-63)||(30947335-30947392)
chr2 (32-104)||(23801868-23801939)
chr2 (51-134)||(27107556-27107639)
chr2 (1-56)||(28645773-28645829)
[»] scaffold0143 (1 HSPs)
scaffold0143 (5-289)||(36297-36573)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-276)||(16867-17136)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-265)||(103101-103358)
[»] scaffold0022 (1 HSPs)
scaffold0022 (22-284)||(3139-3392)
[»] scaffold0064 (2 HSPs)
scaffold0064 (1-214)||(52886-53088)
scaffold0064 (135-259)||(45778-45903)
[»] scaffold0338 (1 HSPs)
scaffold0338 (1-184)||(16201-16377)
[»] scaffold0102 (1 HSPs)
scaffold0102 (22-184)||(37022-37177)
[»] scaffold0103 (1 HSPs)
scaffold0103 (22-184)||(25661-25816)
[»] scaffold0037 (1 HSPs)
scaffold0037 (26-184)||(110244-110395)
[»] scaffold0008 (1 HSPs)
scaffold0008 (22-184)||(40351-40506)
[»] scaffold0259 (1 HSPs)
scaffold0259 (22-184)||(17266-17420)
[»] scaffold0088 (1 HSPs)
scaffold0088 (22-127)||(36609-36715)
[»] scaffold0059 (3 HSPs)
scaffold0059 (26-184)||(61461-61612)
scaffold0059 (22-125)||(50130-50234)
scaffold0059 (143-184)||(48332-48373)
[»] scaffold0226 (3 HSPs)
scaffold0226 (26-184)||(7528-7678)
scaffold0226 (22-184)||(18115-18269)
scaffold0226 (22-184)||(27509-27663)
[»] scaffold0003 (1 HSPs)
scaffold0003 (22-131)||(26421-26530)
[»] scaffold0006 (1 HSPs)
scaffold0006 (31-130)||(87762-87861)
[»] scaffold0185 (1 HSPs)
scaffold0185 (22-179)||(2351-2501)
[»] scaffold0190 (1 HSPs)
scaffold0190 (22-131)||(16657-16767)
[»] scaffold0333 (1 HSPs)
scaffold0333 (34-118)||(5674-5759)
[»] scaffold0035 (1 HSPs)
scaffold0035 (33-182)||(37393-37536)
[»] scaffold0072 (1 HSPs)
scaffold0072 (3-63)||(18547-18607)
[»] scaffold0015 (2 HSPs)
scaffold0015 (26-78)||(202416-202468)
scaffold0015 (142-232)||(202523-202612)
[»] scaffold0062 (1 HSPs)
scaffold0062 (3-60)||(2182-2240)
[»] scaffold0205 (1 HSPs)
scaffold0205 (3-63)||(9969-10030)
[»] scaffold0505 (2 HSPs)
scaffold0505 (1-72)||(10128-10200)
scaffold0505 (141-184)||(10024-10067)
[»] scaffold0423 (2 HSPs)
scaffold0423 (22-70)||(13624-13672)
scaffold0423 (135-184)||(13729-13778)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-63)||(8754-8817)
[»] scaffold0520 (2 HSPs)
scaffold0520 (1-78)||(5413-5491)
scaffold0520 (143-184)||(5548-5589)


Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 290
Target Start/End: Original strand, 8726853 - 8727121
Alignment:
Q  14 tgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |    
T  8726853 tgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccatattcaatagctctcagcaaactcctcgtttgcactaacg 8726952  T
Q  114 acctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgat 213  Q
    |||||||||||||||||| ||        |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  8726953 acctaggacctacccgtaatg--------acttcaacctatgaactcctagatctgagatctcatctcactcccttacaactgatcacaacccgtgtgat 8727044  T
Q  214 tctcaaattgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||    
T  8727045 tctcaagttacaaacacaatgaaatgaagttaccttcaaacaaaacaactaaacactgtacttcacagcttaggtgc 8727121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 14 - 290
Target Start/End: Original strand, 39080974 - 39081242
Alignment:
Q  14 tgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||||||    
T  39080974 tgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttgcactaatg 39081073  T
Q  114 acctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgat 213  Q
    |||||| ||||||||||        ||||||||||||||| ||||| |||||| ||||||| ||||||||| ||||||||||||||||||||| | ||||    
T  39081074 acctagaacctacccgt--------actgacttcaacctaggaactactagatctgagatcccatctcactaccttacaactgatcacagcccctatgat 39081165  T
Q  214 tctcaaattgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  39081166 tctcaaattacaaatacaatgaaatgaagttaccttcaaacaaaacaactaaacaccgtacttcacagcttaggtgc 39081242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 17279884 - 17280166
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  17279884 taacccagttcggtgcaacgtcacctactctgggggataccaagccaggaaggaaatccactagtgtagttcgtattcaatagctctaagcaaactcctc 17279983  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||||||||||||||||||        || |||||||||||||||| ||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  17279984 gtttgcactaatgacctaggacctac--------ccatactgacttcaacctaggaacttctagatctgagatcccatctcagtcccttacaactgatca 17280075  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaa-atgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    |||||| | |||| |||||||  |||| ||||| || |||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  17280076 cagcccctttgatactcaaataacaaatacaatcaatatgaagttaccttcaaacaaaacaactaaacaccgtacttcacagcttaggtgc 17280166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 17880903 - 17880620
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  17880903 taacccagttcggtgcaacgtcacctactctggggggctaccaagccaagaaggaaatccactagtgtagttcttattcaatagctctcagcaaactcct 17880804  T
Q  100 cgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||||||||||||||||||||| | ||        ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  17880803 cgtttgcactaatgacctaggaacgac--------ccgtactgacttcaacctaggaactcctagatctgagatctcatctcactcccttacaactgatc 17880712  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    ||| ||| ||||||||||||||| |||| ||||| ||||||| |||||||| |||||||| ||||||| ||||||||||| ||||| |||||    
T  17880711 acaacccctgtgattctcaaattacaaatacaatcaaatgaatttaccttcaaaacaaaataactaaacaccgtacttcacagctttggtgc 17880620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 5 - 289
Target Start/End: Complemental strand, 33466319 - 33466043
Alignment:
Q  5 ccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| |||||||| |||||||    
T  33466319 ccagttcggtgcaacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaaaagctctcagcaaacttctcgttt 33466220  T
Q  105 gcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagc 204  Q
    ||||||||||||||||||||||        | ||||||||||||||||| |||||||||||| ||||| | |||||||||||||||||| | ||||||||    
T  33466219 gcactaatgacctaggacctac--------cggtactgacttcaacctaggaactcctagatctgaga-cccatctcactcccttacaaataatcacagc 33466129  T
Q  205 ccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttca-aacaaaacaactaaataccgtacttcagagcttaggtg 289  Q
    || ||||||||||| |||  | ||||||| ||||||||||||||||| ||||||||||||||  ||||| ||||| ||||| ||||    
T  33466128 ccctgtgattctcagattatagacacaatcaaatgaagttaccttcagaacaaaacaactaatcaccgtgcttcacagctttggtg 33466043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 4 - 290
Target Start/End: Complemental strand, 37155686 - 37155406
Alignment:
Q  4 cccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtt 103  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||||    
T  37155686 cccagttcggtataacgtcacctactctgggggctaccaagccaggaaggaaattcactagtgtaatccttattcaatagctctcagcaaactcctcgtt 37155587  T
Q  104 tgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcaca 202  Q
    ||||||| ||||||||||||||||        ||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  37155586 tgcactatatgacctaggacctac--------ccgtactgacttcaacctaggaactccaagatctgagatcccatctcactcccttacaactgatcaca 37155495  T
Q  203 gcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
     | | |||||| ||||||| ||||| |||||  |||| ||||||||||||||||||||||||||| ||  ||||||| | |||||||||    
T  37155494 acgcctgtgatactcaaatagcaaatacaatcaaaataaagttaccttcaaacaaaacaactaaacacaatacttcacaacttaggtgc 37155406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 22476247 - 22476402
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  22476247 cacctactttgagggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 22476346  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||| ||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  22476347 acctacccata------ta--gacttcaacctaggaactcctagatttgagatcccatctcact 22476402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 24091974 - 24092128
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| | |||||| |||||||||||||||| |||||| |||||||||    
T  24091974 cacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattctacagctctcagcaaactcctcgtttacactaaagacctagga 24092073  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||        ||||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  24092074 cctac--------ccgtattgatttcaacctaggaactcctagatctgagatcccatctcact 24092128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 22874206 - 22874307
Alignment:
Q  33 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtac 132  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  22874206 ggggctaccaagctaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcatttgcactaatgacctaggacctacccgtac 22874305  T
Q  133 tg 134  Q
    ||    
T  22874306 tg 22874307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 1683973 - 1684150
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| |||||  || |||  ||||||||||||    
T  1683973 taacccaattcggtgcaacgtcacctactctggcg-ctaccaagccagga-ggaaatccactagtgtagtccttattctctaactcccagcaaactcctc 1684070  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactccct 188  Q
    |||| |||||| |||||||| | ||||||| ||       ||||||||||||| |||||||||| | ||||||| |||||||||||||    
T  1684071 gtttacactaaagacctaggtcatacccgt-ct-------tgacttcaacctaagaactcctagttctgagatcccatctcactccct 1684150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 33977075 - 33977184
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||| |||||| ||||||| |    
T  33977075 cacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatagctctcagcaaactccttgtttacactaaagacctagaa 33977174  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  33977175 cctacccgta 33977184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 11221409 - 11221260
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||||||||||||| |||||||||||||     |||||||||| ||||| |||||||| |||||||||||||||| |||||| |||||||||    
T  11221409 cacctactctgggggctaccaaaccaggaaggaaat-----agtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 11221315  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  11221314 cctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 11221260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 9996494 - 9996625
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||||||||||| |||   |||||||||||| | |||||||| |||||| ||||||||||| |||||||| ||||| |||||||| |||||||||||    
T  9996494 taacccagttcggtgacaaacacacctactctggagactaccaagtcaggaatgaaatccactattgtagtccttattctatagctctcagcaaactcct 9996593  T
Q  100 cgtttgcactaatgacctaggacctacccgta 131  Q
    | ||| |||||| |||||||||||||||||||    
T  9996594 catttacactaaagacctaggacctacccgta 9996625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 13660513 - 13660359
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||||||  ||||| | |||||| |||||||||||||||| | |||| ||||| |||    
T  13660513 cacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattcta-agctctcagcaaactcctcgtttactctaaagacctggga 13660415  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactc 185  Q
    ||||||||||      ||  |||||||||||| |||||||||||| ||||||| ||||||||||    
T  13660414 cctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcactc 13660359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 13719156 - 13719002
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||||||  ||||| | |||||| |||||||||||||||| | |||| ||||| |||    
T  13719156 cacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattcta-agctctcagcaaactcctcgtttactctaaagacctggga 13719058  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactc 185  Q
    ||||||||||      ||  |||||||||||| |||||||||||| ||||||| ||||||||||    
T  13719057 cctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcactc 13719002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23249730 - 23249806
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 77  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  23249730 taacccaattcggtgcaacgtcacctactctgggggctaccaagccaagaaggaaatccactagtgtagtccttatt 23249806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 23541553 - 23541443
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| | |||||||||||||| |||||||||  ||||| ||||| || |||||||    
T  23541553 cacctactctgggggctaccaaaccgggaaggaaatccactagtgtagtacttattcaatagctctcagcaaactcgccgtttacactatattacctagg 23541454  T
Q  121 acctacccgta 131  Q
    |||||| ||||    
T  23541453 acctactcgta 23541443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 12814734 - 12814626
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 120  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | || ||| |||||||||||||||| | |||   ||||||||    
T  12814734 cacctactctgggggctaccaagccaggaaggaaattcactagtgtagtccttattcta-agttctcagcaaactcctcgtttacaactgtagacctagg 12814636  T
Q  121 acctacccgt 130  Q
    ||||||||||    
T  12814635 acctacccgt 12814626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 184
Target Start/End: Original strand, 22485177 - 22485305
Alignment:
Q  49 gaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgacttc 147  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||  || |||||      ||  ||||||    
T  22485177 gaagaaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggaattatccgta------ta--gacttc 22485268  T
Q  148 aacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||| |||||||||||| ||||||| |||||||||    
T  22485269 aacctaagaactcctagatctgagatcccatctcact 22485305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 23864631 - 23864426
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||| || |||||||| |||||||| |||||||| ||||||| ||||||| ||||||||||||||||||| ||||| | || ||| |||||||||||    
T  23864631 taacccaatttggtgcaacatcacctacatctgggggataccaagtcaggaagaaaatccactagtgtagtccttattcta-agttctcagcaaactcct 23864533  T
Q  100 cgtttgcactaat-gacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgat 198  Q
    || || || |  | ||||||||||||||        ||||  ||||||||||||| |||||||||||| ||||||| |||||||||  | |||||   ||    
T  23864532 cgcttacaattctagacctaggacctac--------ccgttttgacttcaacctaggaactcctagatctgagatcccatctcactttcctacaatcaat 23864441  T
Q  199 cacagcccgtgtgat 213  Q
    |||||||| ||||||    
T  23864440 cacagcccatgtgat 23864426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 25240432 - 25240531
Alignment:
Q  32 gggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctaggacctacccgt 130  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||| |||||| |||||||||||  ||| ||| | | ||||||||||||||||||    
T  25240432 gggggctaccaaaccaggaaggaaatccaccagtgtagtccttattcaaaagctctcagcaaactccttctttacactttacgacctaggacctacccgt 25240531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 8734332 - 8734386
Alignment:
Q  295 accacaaaatttgctcaaatagccataaattgattagaaacaaaatagcattaag 349  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8734332 accacaaaatttgctcaaatatccataaattgattagaaacaaaatagcattaag 8734386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 27925564 - 27925434
Alignment:
Q  46 caggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgact 145  Q
    ||||||||||||||||||||||||||| ||||| |||||||| | |||||||| | ||| ||| || ||| |||||||||||||||      ||  ||||    
T  27925564 caggaaggaaatccactagtgtagtccttattctatagctctcaacaaactccacatttacaccaaagacataggacctacccgta------ta--gact 27925473  T
Q  146 tcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||| |||| |||||||||||| ||||||| |||||||||    
T  27925472 tcatcctaggaactcctagatctgagatcccatctcact 27925434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 45136184 - 45136286
Alignment:
Q  74 tattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagat 173  Q
    ||||| |||||||| |||||||||||| ||| |||||| |||||||||||||||||||      ||  |||||||||||| |||||||||||||||||||    
T  45136184 tattcgatagctctcagcaaactcctcatttacactaaagacctaggacctacccgta------ta--gacttcaacctaggaactcctagatatgagat 45136275  T
Q  174 ctcatctcact 184  Q
    | |||||||||    
T  45136276 cccatctcact 45136286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 33961777 - 33961860
Alignment:
Q  21 tcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 104  Q
    |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||  || | ||||||||| ||||    
T  33961777 tcacctactctgggggctaccacgtcaggaaggaaatcaactagtgtagtccgtattctataggactcaacaaactccttgttt 33961860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 1562509 - 1562459
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1562509 cacctactttgggggctaccaagccaggaaggaaatccactagtgtagtcc 1562459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 20255021 - 20254943
Alignment:
Q  26 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 104  Q
    |||| ||||||||||||||| ||||||||||||||||||||| |||| ||||| | || ||| ||||||||||||||||    
T  20255021 tactatgggggctaccaagctaggaaggaaatccactagtgtggtccttattctaaagttctcagcaaactcctcgttt 20254943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 24384582 - 24384687
Alignment:
Q  26 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacct 124  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | || ||| ||||||||||  |||| | ||| | |||||||| |||    
T  24384582 tactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcta-agttctcagcaaactccaagtttacaacttaagacctagggcct 24384680  T
Q  125 acccgta 131  Q
    |||||||    
T  24384681 acccgta 24384687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 45133681 - 45133729
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 70  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45133681 cacctactctgggggctatcaagccaggaaggaaatccactagtgtagt 45133729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 24850565 - 24850493
Alignment:
Q  31 tgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 104  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||| | || | | ||||||||||||||||    
T  24850565 tgggggctaccaagctaggaaggaaatccactagtgtagtccttattcta-agttatcagcaaactcctcgttt 24850493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12240233 - 12240306
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccg 73  Q
    ||||||||||||||| |||   ||||||||| || ||||||||| ||||||||||||||| |||||||||||||    
T  12240233 taacccagttcggtgacaaacacacctactccggaggctaccaaaccaggaaggaaatccgctagtgtagtccg 12240306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24482313 - 24482376
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||| || ||||||||| |||||    
T  24482313 taacccagtttggtgcaacgtcacctacatctgggggctaacaagtcaagaaggaaattcacta 24482376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 12240365 - 12240413
Alignment:
Q  136 cgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||||| |||| |||||||||||  |||||||||||||||||    
T  12240365 cgtactgacttcagcctaggaactcctagacctgagatctcatctcact 12240413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 23249863 - 23249906
Alignment:
Q  141 tgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||    
T  23249863 tgacttcaacctaggaactcctagatctgagatcccatctcact 23249906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 9 - 290
Target Start/End: Complemental strand, 45599484 - 45599211
Alignment:
Q  9 ttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||||||| |||||||    
T  45599484 ttcggtgcaacgtcacctactctcggggctaccaagccaggaaggaaatccactaatgtagtccgtattcaatagttctcaacaaactcctcatttgcac 45599385  T
Q  109 taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgt 208  Q
    ||||||||||||||||||||||||||        ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||| |    
T  45599384 taatgacctaggacctacccgtactg--------acttcaacctaggaactcctagatctgagatctcatctcactcccttacaactgatcacaaccctt 45599293  T
Q  209 gtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||| |||||||||||    
T  45599292 gtgattctcaaattacaaacacaatgaaatgaagttactttcaaacaaaacaactaaacaccatacttcacagcttaggtgc 45599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 40313386 - 40313105
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40313386 taacccagttcagtgcaacgttacctactcagggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctc 40313287  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||||||||||||||||||||||||        |||||||||||||||||||| |||||| || || |||||||||||||||||||||||||||||||||    
T  40313286 gtttgcactaatgacctaggaccta--------gccgtactgacttcaacctaggaactcatatatctgagatctcatctcactcccttacaactgatca 40313195  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    || ||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||| || |||||||| ||||| |||||    
T  40313194 caacccctgtgattctcaaactacaaacacaatgaaataaagttaccttcaaacaaaataactaaaaactgtacttcacagctttggtgc 40313105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 33062381 - 33062662
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33062381 taacccagttcggtgcaacgtcacctactctgggggctaccaagccagaaaggaaatccactagtgtagtccttattcaatagctcttagcaaactcctc 33062480  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||||||||| ||||||||||||||||        || |||||||||||||||| |||||||||||| ||||| | ||||||| |||| |||   |||||    
T  33062481 gtttgcactatatgacctaggacctac--------ccttactgacttcaacctaggaactcctagatctgagaccccatctcattcccgtac--ttgatc 33062570  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaac-aaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    ||| ||| ||||||||||||| | |||| ||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||    
T  33062571 acaacccctgtgattctcaaaatacaaatacaatcaaatgaagttaccttcaaacaaaaacaactaaacaccgtacttcatagctttggtgc 33062662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 16 - 284
Target Start/End: Original strand, 17012013 - 17012275
Alignment:
Q  16 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atga 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||||||||||| ||||    
T  17012013 caacatcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaacagctttcagcaaactcctcgtttgcactatatga 17012112  T
Q  115 cctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgatt 214  Q
    ||||||||||||| ||||        ||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||| ||| |||||||    
T  17012113 cctaggacctacctgtac--------tgacttcaacctaggaactcctggatctgagatctcatctcattcccttacaactgatcacaacccctgtgatt 17012204  T
Q  215 ctcaaattgcaaacacaatga-aatgaagttaccttcaaacaaaacaactaaataccgtacttcagagctt 284  Q
    |||||||| |||| ||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  17012205 ctcaaattacaaatacaatcagaatgaagttaccttcaaacaaaacaactaaacaccgtacttcacagctt 17012275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 52436983 - 52436700
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||||||||||  ||||| |||||||||||| | || |||||||||    
T  52436983 taacccagttcggtgcaacgtcacctactctggaggctaccgagtcaggaagaaaatccactagtacagtccttattcaatagctttcagtaaactcctc 52436884  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    ||| |||||| ||||| ||||| ||||||||||||        ||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||||    
T  52436883 gttcgcactatatgacataggatctacccgtactg--------acttcaacctaggaactcctagatctgagatctcatcccactcccttacaaatgatc 52436792  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    ||||||| ||||||||||||  | |||||||||| |||||||||| ||||| |||||||||||||||| ||||| ||||| ||||| |||||    
T  52436791 acagcccctgtgattctcaatatacaaacacaatcaaatgaagttgccttcaaaacaaaacaactaaacaccgtgcttcatagctttggtgc 52436700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 17038243 - 17038494
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  17038243 taacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtgtagtccttattctctagctctcagcaaactcctc 17038341  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||| |||||| ||| |||||||||||| | ||       ||||||||||||| |||||||||||| ||||||| |||||| ||||| ||||||  ||||    
T  17038342 gtttacactaaagacataggacctacccat-ct-------tgacttcaacctaggaactcctagatctgagatcccatctctctccc-tacaaccaatca 17038432  T
Q  201 cagcccgtgtgattctcaaattgcaaacac-----aatgaaatgaagttaccttcaaacaaa 257  Q
    ||||||  |||||| |||  || |||||||     ||| | |||||||||||||||||||||    
T  17038433 cagccccagtgattatcaggttacaaacacaaacaaatcatatgaagttaccttcaaacaaa 17038494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 26972542 - 26972386
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  26972542 cacctactctgggggctaccaagccagtaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 26972443  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||  |    |||   ||||||||| |||||||||||| ||||||| |||||||||    
T  26972442 acctacccgtatag----act---ttcaacctaggaactcctagatctgagatcccatctcact 26972386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 4246052 - 4246207
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  4246052 cacctactctgggggctaccaagacaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 4246151  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||| |||      ||  |||||||||||| |||||||||||| |||||||  ||||||||    
T  4246152 acctacctgta------ta--gacttcaacctaggaactcctagatctgagatcctatctcact 4246207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 11668004 - 11667850
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||| |||||| ||||  |||    
T  11668004 cacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagaccatgga 11667905  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||      ||  |||||||||||| |||||||||||| ||||||  |||||||||    
T  11667904 cctacccgta------ta--gacttcaacctaggaactcctagatctgagattccatctcact 11667850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 34 - 184
Target Start/End: Complemental strand, 20841394 - 20841252
Alignment:
Q  34 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtact 133  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||| ||||||||||||||           
T  20841394 gggctaccaagccaggaaggaaatccactagtgtagtccttattttatagctcttagcaaactcctcgtttacactaaagacctaggacctac------- 20841302  T
Q  134 gccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
       |||| |||||||||||| |||||||||||| ||||||| |||||||||    
T  20841301 -atgtacagacttcaacctaggaactcctagatctgagatcccatctcact 20841252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 17851514 - 17851406
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| |||||| |||||||||    
T  17851514 cacctactctgggggctactaagccaagaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 17851415  T
Q  122 cctacccgt 130  Q
    |||| ||||    
T  17851414 cctagccgt 17851406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 1973332 - 1973484
Alignment:
Q  24 cctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacc 123  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||||| || ||||||||| ||| |||||| |||||||||||    
T  1973332 cctactctgggggataccaagtcaggaaggaaatccactagtgtagtccttattctatagctctcagaaaactcctcatttacactaaagacctaggacc 1973431  T
Q  124 tacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||        ||||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  1973432 tac--------ccgtattgatttcaacctaggaactcctagatctgagatcccatctcact 1973484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 23478076 - 23477924
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||  || |||| || ||| ||||||| |    
T  23478076 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagcaaacaacttgtttacaataaagacctagaa 23477977  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctca 182  Q
    ||||||        |||| ||| ||||||||| |||||||||||| ||||||| |||||||    
T  23477976 cctacc--------cgtattgatttcaacctaggaactcctagatctgagatcccatctca 23477924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 12753078 - 12753184
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||| |||||||| ||| |||||||||||| |||||| |||||||||    
T  12753078 cacctactctggaggctaccaagccaggaagtaaatccactagcgtagtccttattctatagctctcagcgaactcctcgtttacactaaagacctagga 12753177  T
Q  122 cctaccc 128  Q
    |||||||    
T  12753178 cctaccc 12753184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 14745924 - 14745770
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||| ||||| || |    
T  14745924 caccaactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagctctcagcaaactactcgtttacactatatgacata-g 14745826  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||| ||||| ||||||| |||||||||    
T  14745825 acctacccgta------ta--gacttcaacctaggaactcttagatctgagatcacatctcact 14745770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 13165422 - 13165521
Alignment:
Q  33 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 131  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||| || || |||||||||||||||||||||    
T  13165422 ggggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcagcatactcctcgtttacagtatatgacctaggacctacccgta 13165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 47941483 - 47941373
Alignment:
Q  21 tcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctag 119  Q
    |||||||| |||||| ||||| ||| || |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||| |||    
T  47941483 tcacctacatctgggagctacaaagtcaagaaggaaatccactagtgtagtccttattctatagctcttagcaaactcctcgtttacactaaagacatag 47941384  T
Q  120 gacctacccgt 130  Q
    |||||||||||    
T  47941383 gacctacccgt 47941373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 17379786 - 17379610
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |  ||| |||||||||||    
T  17379786 taacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcta-atttctcagcaaactcct 17379688  T
Q  100 cgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| | |||   |||||||||||||||||| ||       |||||||||||||  ||||||||||| ||||||| |||||||||    
T  17379687 cgtttacaactctagacctaggacctacccgt-ct-------tgacttcaacctagaaactcctagatctgagatcccatctcact 17379610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 17355994 - 17355818
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||||||||||| |||   ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| | |  ||| |||||||||||    
T  17355994 taacccagttcggtgacaaacacacctactctgggggctaccaagcctggaaggaaatccaccagtgtagtccttattcta-atttctcagcaaactcct 17355896  T
Q  100 cgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| | |||    ||||||||||||||||| ||       ||||||||||||| |||||| ||||| ||||||| |||||||||    
T  17355895 cgtttacaactctacacctaggacctacccgt-ct-------tgacttcaacctaggaactcatagatctgagatcccatctcact 17355818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 51472230 - 51472126
Alignment:
Q  26 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacct 124  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||||| | || ||| | |||||||||||||| | |||   ||||||||||||    
T  51472230 tactctgggggctaccaaaccaagaaggaaatccactagtgtagtccttattcta-agttctcatcaaactcctcgtttacaactctagacctaggacct 51472132  T
Q  125 acccgt 130  Q
    ||||||    
T  51472131 acccgt 51472126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18390268 - 18390200
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgta 68  Q
    ||||||||||||||| |||   ||||||||||||||||||||||||||| |||||||||||||||||||    
T  18390268 taacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagtgta 18390200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 20859684 - 20859641
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagt 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20859684 cacctactctgggggctaccaagccaggaaggaaatccactagt 20859641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 49086755 - 49086692
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| |||||    
T  49086755 taacccagttcggtgcaacgtcacctacatgtgggggctaccaagccaggaaagaaattcacta 49086692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 50057518 - 50057579
Alignment:
Q  3 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||| ||||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  50057518 acccagttcagtgcaacttcacctacatctgggggctaccaagtcaggaaggaaatccacta 50057579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 15804252 - 15804196
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 78  Q
    |||||||| |||||||||||||||||||||| |||| |||||||||||||| |||||    
T  15804252 cacctactatgggggctaccaagccaggaagaaaattcactagtgtagtccttattc 15804196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 255
Target Start/End: Complemental strand, 10340184 - 10340075
Alignment:
Q  145 ttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagtt 244  Q
    ||||||||| |||||||||||| |||||||||||||||||  | |||||   |||||||||| ||||||| |||||||  ||||||||     |||||||    
T  10340184 ttcaacctaggaactcctagatctgagatctcatctcactatcctacaatcaatcacagcccctgtgattatcaaatt-taaacacaaaatggtgaagtt 10340086  T
Q  245 accttcaaaca 255  Q
    |||||||||||    
T  10340085 accttcaaaca 10340075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 10340298 - 10340249
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 71  Q
    ||||||||||||||||||| ||| |||||||||||||||||| |||||||    
T  10340298 cacctactctgggggctactaagtcaggaaggaaatccactattgtagtc 10340249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 8281937 - 8281992
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 77  Q
    ||||||||| || ||| |||||||||||||||||| |||||| |||||||| ||||    
T  8281937 cacctactccggaggcgaccaagccaggaaggaaacccactattgtagtccttatt 8281992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 41330943 - 41330897
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgta 68  Q
    |||||||| |||||||||| ||||||||||| ||| |||||||||||    
T  41330943 cacctactttgggggctactaagccaggaagtaaaaccactagtgta 41330897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 48797781 - 48797506
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  48797781 taacccagttcagtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctc 48797682  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  48797681 gtttgcactaatgacctaggacctacccgt--------actgacttcaacctaggaactcctagatctgagatctcat-tcactcccttacaactgatca 48797591  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagctt 284  Q
    || ||| ||||||||||||||| |||| |||||  |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  48797590 caacccctgtgattctcaaattacaaatacaatcaaaatgaagttaccttcaaacaaaacaactaaacaccgtacttcacagctt 48797506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 3290847 - 3290564
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  3290847 taacccagtttggtgcaacgtcaccaactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctc 3290748  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||| ||||| ||||||||||||||||||||||||        ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  3290747 gttttcactatatgacctaggacctacccgtactg--------acttcaacctaggaactcctagatctgagatctcatttcactcccttacaactgatc 3290656  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    ||||||| |||||| ||||||| ||||| |||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3290655 acagcccctgtgatactcaaatagcaaatacaatcaaaatgaagttaccttcaaacaaaacaactaaataccgtacttcacagcttaggtgc 3290564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 7620076 - 7620347
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  7620076 taacccagttcggtgcaacgtcacctactttggaggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaaatcctc 7620175  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||||||||||||||||||||| |||        ||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  7620176 gtttgcactaatgacctaggacttac--------ccgtactaacttcaacctaggaactcctagatctgagatcccatctcactcccttacaactgatca 7620267  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttca 278  Q
    || ||| | ||||||| ||||| |||||||||| ||||||||||||||||||  |||||||||||||| |||||||||||    
T  7620268 caacccctatgattcttaaattacaaacacaataaaatgaagttaccttcaaacacaaaacaactaaacaccgtacttca 7620347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 14975428 - 14975711
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||| ||||||||| ||| |||||||||||||| | |||||| |||    
T  14975428 taacccagttcggtgcaacgtcacctactccgggggcaaccatgccaggaacgaaatctactagtgtattccttattcaatagctctcaacaaacttctc 14975527  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||    
T  14975528 gtttgcactaatgacctaggacctacccgt--------actgacttcaacctaggaactcctagatctgagatcccatctcactcccttacaaatgatca 14975619  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    | ||||  |||||||||||||| |||||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||| |||||    
T  14975620 ctgccccagtgattctcaaattacaaacacaataaaatgaagttaccttcaaacacaaaacaactaaacaccgtacttcacagctttggtgc 14975711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 14984667 - 14984938
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||      
T  14984667 taacccagttcggtgcaacgtcacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaactccct 14984766  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||||||||||| ||||||        ||||||||||||||||||| ||| |||||||| ||||||| |||||||| ||||||||||||||||    
T  14984767 gtttgcactaatgacctagaacctac--------ccgtactgacttcaacctaggaattcctagatctgagatcccatctcacgcccttacaactgatca 14984858  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttca 278  Q
    || ||| ||||||||||||||| |||||||||| ||||||||||||||||||  |||||||||||||| | |||||||||    
T  14984859 caacccctgtgattctcaaattacaaacacaataaaatgaagttaccttcaaacacaaaacaactaaacatcgtacttca 14984938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 15404904 - 15405187
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||| ||||||||| ||| |||||||||||||| | |||||| |||    
T  15404904 taacccagttcggtgcaacgtcacctactccgggggcaaccatgccaggaacgaaatctactagtgtattccttattcaatagctctcaacaaacttctc 15405003  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||    
T  15405004 gtttgcactaatgacctaggacctacccgt--------actgacttcaacctaggaactcctagatctgagatcccatctcactcccttacaaatgatca 15405095  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    | ||||  |||||||||||||| |||||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||| |||||    
T  15405096 ctgccccagtgattctcaaattacaaacacaataaaatgaagttaccttcaaacacaaaacaactaaacaccgtacttcacagctttggtgc 15405187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 15414278 - 15414549
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||      
T  15414278 taacccagttcggtgcaacgtcacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaactccct 15414377  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||||||||||| ||||||        ||||||||||||||||||| ||| |||||||| ||||||| |||||||| ||||||||||||||||    
T  15414378 gtttgcactaatgacctagaacctac--------ccgtactgacttcaacctaggaattcctagatctgagatcccatctcacgcccttacaactgatca 15414469  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttca 278  Q
    || ||| ||||||||||||||| |||||||||| ||||||||||||||||||  |||||||||||||| | |||||||||    
T  15414470 caacccctgtgattctcaaattacaaacacaataaaatgaagttaccttcaaacacaaaacaactaaacatcgtacttca 15414549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 11628635 - 11628915
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  11628635 taacccagttcggtgcaacgtcacctactttgggggttaccaaactaggaaggaaatccactcttgtagtccttattcaatagctcttagcaaactcctc 11628734  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||||||||| ||||||||||||||||        |||||||||||||| |||| ||||||||||||   ||||| || |||||||||||||||||||||    
T  11628735 gtttgcactatatgacctaggacctac--------ccgtactgacttcagcctaggaactcctagatcgaagatcccacctcactcccttacaactgatc 11628826  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    ||| ||| ||||||||||||| | |||| ||||| |||||||||||||||||||||||  ||||||  ||||||||||| ||||| |||||    
T  11628827 acaacccctgtgattctcaaaatacaaaaacaatcaaatgaagttaccttcaaacaaa--aactaatcaccgtacttcacagctttggtgc 11628915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 42782751 - 42782957
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  42782751 taacccagttcggtgcaatgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagctctcagcaaactcctc 42782850  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    ||||||| || ||||||||||||||||        ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  |||    
T  42782851 gtttgcaatatatgacctaggacctac--------ccgtactgacttcaacctaggaactcctagatctgagatctcatctcactcccttacaaccaatc 42782942  T
Q  200 acagcccgtgtgatt 214  Q
    ||||||| |||||||    
T  42782943 acagcccctgtgatt 42782957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 30226080 - 30226256
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  30226080 taacccagttcggtgcaacgtcacctacatctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcct 30226179  T
Q  100 cgtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcac 183  Q
    ||||||||||| ||||||||||||||||        ||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  30226180 cgtttgcactatatgacctaggacctac--------ccgtactgacttcaacctaggaactcctagatctgagatcccatctcac 30226256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 9564252 - 9564503
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| |||||  ||||||| ||||||||||||    
T  9564252 taacccagttcggtgcaacgtcacctactctgggggctacaaagccagga-ggaaatccaatagtgtagtccttattctctagctctcagcaaactcctc 9564350  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||| ||| || ||||||||||||||||     |||    ||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||  ||||    
T  9564351 gtttacacaaaagacctaggacctaccc-----gcc---ttgacttcaacctaggaactcctagatctgagatcccatctcactccc-tacaaccaatca 9564441  T
Q  201 cagcccgtgtgattctcaaattgcaaacac-----aatgaaatgaagttaccttcaaacaaa 257  Q
    || |||  |||||| |||  || |||||||     ||| | |||||||||||||||||||||    
T  9564442 catccccggtgattatcaggttacaaacacaaacaaatcagatgaagttaccttcaaacaaa 9564503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 4794751 - 4794527
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  |||||||  | |||||||||    
T  4794751 taacccagttcagtgcaacgtcacctactctgggggctaccaagccagga-ggaaatccactagtgtagtccttattctctagctctcggaaaactcctc 4794653  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacct---atgaactcctagatatgagatctcatctcactcccttacaactga 197  Q
    |||| |||||| |||||||||||||||||| ||       ||||||||||||   | |||||||||||| ||||||| |||||||||||| ||||||  |    
T  4794652 gtttacactaaagacctaggacctacccgt-ct-------tgacttcaacctaggaggaactcctagatctgagatcgcatctcactccc-tacaaccaa 4794562  T
Q  198 tcacagcccgtgtgattctcaaattgcaaacacaa 232  Q
    ||||||||| ||||||| |||  || |||||||||    
T  4794561 tcacagcccctgtgattatcaggttacaaacacaa 4794527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 11560668 - 11560457
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| |||||| | |||||||||||||| || |||||||||    
T  11560668 taacccagttcggtgcactgtcacctactctgggggctaccaagctaggaaggaaatccgctattgtagtgcttattcaatagctctcagtaaactcctc 11560569  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
     ||| |||||| ||||||  |||||||        |||| ||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| | ||||    
T  11560568 atttacactaaagacctacaacctacc--------cgtattgacttcaacctaggaactcctggatctgatatctcatctcactcccttgcaaataatca 11560477  T
Q  201 cagcccgtgtgattctcaaa 220  Q
    |||||  |||||||||||||    
T  11560476 cagcctctgtgattctcaaa 11560457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 13455275 - 13455099
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  13455275 taacctagttcggtgcaacgtcacctactctgggggctaccaagcaaggaaggaaatccactagtgtagtccttattcaaaagctcttggcaaactcctc 13455176  T
Q  101 gtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||| ||| | ||||| |||||||||||||| ||        |||||||||||| |||||||||||| ||||||| |||||||||    
T  13455175 gtttacactttatgacttaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagatcccatctcact 13455099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 4458756 - 4458911
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctagg 120  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||| ||| | ||||||||||    
T  4458756 cacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagg 4458855  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  4458856 acctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 4458911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 9566901 - 9567122
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| |||||||||| |||||  ||||||| ||||||||||||    
T  9566901 taacccagttcggtgcaacgttacctactcagggggctaccaagccagga-ggaaatccacaagtgtagtccttattctctagctctcagcaaactcctc 9566999  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
     ||| |||||| |||||||||||||||| | ||       ||| ||||||||| |||||| ||||| ||||||| |||||||||||| ||||||  ||||    
T  9567000 atttacactaaagacctaggacctacccat-ct-------tgagttcaacctaggaactcatagatctgagatcccatctcactccc-tacaaccaatca 9567090  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaa 232  Q
    || ||| ||||||| |||  || |||||||||    
T  9567091 caacccctgtgattatcaggttacaaacacaa 9567122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 11521552 - 11521442
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  11521552 cacctactctaggggctaccaagccaggaaggaaatctactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 11521453  T
Q  121 acctacccgta 131  Q
    |||||||||||    
T  11521452 acctacccgta 11521442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 10658400 - 10658505
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| |||||| |||||||||    
T  10658400 cacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 10658499  T
Q  122 cctacc 127  Q
    ||||||    
T  10658500 cctacc 10658505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 14926664 - 14926773
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| || ||| |||||||||    
T  14926664 cacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagcaaactcctcgtttacagtaaagacctagga 14926763  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  14926764 cctacccgta 14926773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 15350130 - 15350239
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| || ||| |||||||||    
T  15350130 cacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagcaaactcctcgtttacagtaaagacctagga 15350229  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  15350230 cctacccgta 15350239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 15436044 - 15436172
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  15436044 taacccaattcgatgcaacgtcacctactctaggggctaccaagccagaaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctc 15436143  T
Q  101 gtttgcac-taatgacctaggacctaccc 128  Q
    |||| ||| | ||||| ||||||||||||    
T  15436144 gtttacactttatgacttaggacctaccc 15436172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 42636265 - 42636418
Alignment:
Q  23 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggac 122  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||| |||||| ||||||||||    
T  42636265 acctactctggaggctaccaagcaaggaaggaaatccactagtgtagtccttattctatagctctcagcaaactccttgtttacactaaagacctaggac 42636364  T
Q  123 ctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||        || || ||| ||||||||| |||||||||||| |||||||||||||||||    
T  42636365 ctac--------ccatattgatttcaacctaggaactcctagatctgagatctcatctcact 42636418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 15506263 - 15506394
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  15506263 taacccaattcgatgcaacgtcacctactctaggggctaccaagccagaatggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctc 15506362  T
Q  101 gtttgca-ctaatgacctaggacctacccgta 131  Q
    |||| ||  | |||||||||||||||||||||    
T  15506363 gtttacattttatgacctaggacctacccgta 15506394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 20991559 - 20991662
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||||||| |||||| |||||||||    
T  20991559 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattttatagctctcagcaaactcctcgtttacactaaagacctagga 20991658  T
Q  122 ccta 125  Q
    ||||    
T  20991659 ccta 20991662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 16208023 - 16207913
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctagg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||| | |||||||||     
T  16208023 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagc 16207924  T
Q  121 acctacccgta 131  Q
    |||||||||||    
T  16207923 acctacccgta 16207913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 29546279 - 29546125
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| |||||||| ||||||| |||||| |||||||||    
T  29546279 cacctactctcggggctaccaagccaggaaggaaatccactactgtagtccttattctataactctcagcaaacttctcgtttacactaaagacctagga 29546180  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||      ||  ||||| | |||| |||||||||||| |||||||||||||||||    
T  29546179 cctacccgta------ta--gactttagcctaggaactcctagatctgagatctcatctcact 29546125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 645150 - 645305
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| ||||| ||||||||||    
T  645150 cacctactatgggggctacgaagccaggaaggaaatccaccagtgtagtccttattcaatagctctcagcaaacttctcgtttacactacatgacctagg 645249  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||| ||||||      ||  || ||||||||| |||||||||||| ||||||| |||||||||    
T  645250 acctccccgta------ta--gatttcaacctaggaactcctagatctgagatcccatctcact 645305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 10279832 - 10279983
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||||| ||||||||||||||||||||| ||| |||||||||| ||||| |||||||| |||||||||||||||||||||||  ||||||||    
T  10279832 cacctactctgggg-ctaccaagccaggaaggaaattcaccagtgtagtccttattctatagctctcagcaaactcctcgtttgcactaaatacctagga 10279930  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctca 182  Q
    ||||         ||||| ||| ||||||||| |||||| ||||| |||||||||||||||    
T  10279931 ccta--------tccgtattgatttcaacctaggaactcgtagatctgagatctcatctca 10279983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 11588481 - 11588636
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||    ||||||||||||| |||||  |||||||||    
T  11588481 cacctactctagcggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctctaaaaactcctcgtttacactatttgacctagg 11588580  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| ||||||||| || ||||||| |||||||||    
T  11588581 acctacccgta------ta--gacttcaacctaggaactcctatatctgagatcccatctcact 11588636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 11998914 - 11999049
Alignment:
Q  40 ccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgt 138  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||| ||||| |||||||||||||||||||||      |    
T  11998914 ccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttacactatatgacctaggacctacccgta------t 11999007  T
Q  139 actgacttcaacctatgaactcctagatatgagatctcatctca 182  Q
    |  |||||||||||| |||||||||||| ||||||| |||||||    
T  11999008 a--gacttcaacctaggaactcctagatctgagatcccatctca 11999049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 16436791 - 16436900
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||  ||||||| | |||||||||| ||| |||||| |||||||||    
T  16436791 cacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattctgtagctctcaacaaactcctcatttacactaaagacctagga 16436890  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  16436891 cctacccgta 16436900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 184
Target Start/End: Original strand, 14165193 - 14165337
Alignment:
Q  33 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 131  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| |||| |||| |||||||||||    
T  14165193 ggggctacatagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgatctagaacctacccgta 14165292  T
Q  132 ctgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
          ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  14165293 ------ta--gacttcaacctaggaactcctagatctgagatcacatctcact 14165337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2076501 - 2076565
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2076501 taacccagttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccactagt 2076565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2082920 - 2082984
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2082920 taacccagttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccactagt 2082984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23175044 - 23174966
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 78  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  23175044 taacccagttcggtgcaacatcacctacatctaggggctaccaagccaggaaggaaatccactagtgtagtccttattc 23174966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26133078 - 26133000
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 78  Q
    ||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  26133078 taacccagttcggtgacaaagacacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattc 26133000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 135 - 253
Target Start/End: Original strand, 24049572 - 24049691
Alignment:
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatg 234  Q
    ||||| ||||||||||||| |||||||||||| ||||||| |||||||||||| ||||| | |||||||||| |||||||||||  || || |||||||     
T  24049572 ccgtattgacttcaacctaggaactcctagatctgagatcacatctcactccc-tacaaataatcacagcccctgtgattctcagtttacagacacaatc 24049670  T
Q  235 aaa--tgaagttaccttcaaa 253  Q
    |||  ||||||||||||||||    
T  24049671 aaagttgaagttaccttcaaa 24049691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 7586670 - 7586563
Alignment:
Q  23 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagga 121  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | |  ||| |||||| ||||||||| | ||| | |||||||||    
T  7586670 acctactctgggg-ctaccaagccaggaaggaaatccactagtgtagtccttattctaaacttctcagcaaaatcctcgtttacaacttaagacctagga 7586572  T
Q  122 cctacccgt 130  Q
    |||||||||    
T  7586571 cctacccgt 7586563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 12325845 - 12325936
Alignment:
Q  37 ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctaggacctacc 127  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||| ||| ||| | ||||||| |||||||||    
T  12325845 ctaccaagccaggaaggaaatccactagtgtagtcattattcaaaagctctcagcaaactcctcatttacactttatgaccttggacctacc 12325936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24813920 - 24813997
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 77  Q
    ||||||||||||||||||| | |||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24813920 taacccagttcggtgcaacatgacctacataggggggctaccaagccaggaaggaaatccactagtgtagtccttatt 24813997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 9894208 - 9894054
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 120  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||||||||| ||||| | || ||| |||||| |||  |||| | ||| | ||||||||    
T  9894208 cacctactctggggactaccaagtcagtaaggaaatccactagtgtagtccttattcta-agttctcagcaaattccaagtttacaacttaagacctagg 9894110  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    || |||        ||||| ||||||||||||| |||||||||||| ||||||| |||||||||    
T  9894109 acatac--------ccgtattgacttcaacctaggaactcctagatctgagatcccatctcact 9894054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31269218 - 31269148
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 70  Q
    ||||||||||||||| |||  |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  31269218 taacccagttcggtgacaaactcacctactccgggggctaccaagccatgaaggaaatccactagtgtagt 31269148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 20925222 - 20925138
Alignment:
Q  43 agccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacc 127  Q
    ||||| ||||||||||||||||| | |||| ||||| |||||||| | |||||||||||||| |||||| |||||| ||||||||    
T  20925222 agccaagaaggaaatccactagtttcgtccttattctatagctctcaacaaactcctcgtttacactaaagacctaagacctacc 20925138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 23057201 - 23057273
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    ||||||||||||||| |||   ||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  23057201 taacccagttcggtgacaaacacacctactctgagggctaccaagccaggaaggaaattcactagtgtagtcc 23057273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 7508452 - 7508501
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 71  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||    
T  7508452 cacctacttttggggctaccaagccaggaaggaaatccactagtgtagtc 7508501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15708167 - 15708243
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 77  Q
    |||||||||| |||||||| |||||| | ||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  15708167 taacccagtttggtgcaac-tcacctgcatctggggtctaccaagctaggaaggaaatccactagtgtagtccttatt 15708243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 23082915 - 23082842
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 95  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||||||| ||||| | || ||| |||||||    
T  23082915 cacctactctacgggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaac 23082842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 23580095 - 23579941
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 120  Q
    |||||||| |||||| |||||||||| |||||||||| ||||||||||||| ||||  | || | | |||||||||||||||| | ||||   |||||||    
T  23580095 cacctactatgggggttaccaagccaagaaggaaatctactagtgtagtccttatttta-agttttcagcaaactcctcgtttacaactataaacctagg 23579997  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||| ||       ||| ||||||||| |||||||||||| || ||||||||||||||    
T  23579996 acctacccgt-ct-------tgaattcaacctaagaactcctagatctgggatctcatctcact 23579941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 10251457 - 10251513
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 78  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||||| |||||    
T  10251457 cacctactctggaggctaccaagccaggaaggaaatcttctagtgtagtccttattc 10251513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 10309631 - 10309583
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 70  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  10309631 cacctactctgggggctaccaagccaagaaggaagtccactagtgtagt 10309583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 20596966 - 20596918
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 70  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20596966 cacctactctgggggctaccaagccaagaaggaaatcgactagtgtagt 20596918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 24902134 - 24902178
Alignment:
Q  33 ggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 77  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  24902134 ggggctaccaagccaggaaggaaatccactagtgtagtccttatt 24902178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 20588846 - 20588695
Alignment:
Q  25 ctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacc 123  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||  | ||| | || ||| | ||||||||  |||| || || || ||||||||||    
T  20588846 ctactttgggggctaccaagccaggaaggaaatcaactagtgtagtcgttgttcta-agttctcaacaaactccaagtttacaatatatcacctaggacc 20588748  T
Q  124 tacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||         || ||| ||||||||||| |||||||||||| |||||||||||||||||    
T  20588747 tac--------tcgcactaacttcaacctaagaactcctagatctgagatctcatctcact 20588695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 6045340 - 6045393
Alignment:
Q  24 cctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 78  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  6045340 cctactctgggg-ctaccaagccaggaagaaaatccactagtgtagtccttattc 6045393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 222
Target Start/End: Complemental strand, 10038861 - 10038677
Alignment:
Q  31 tgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgca-ctaatgacctaggacctacccg 129  Q
    |||||||||| |||| |  ||||||||||||||||||||||| ||||| | || |||  |||||||| |||||| || || | |||||||||||| | ||    
T  10038861 tgggggctactaagcaaataaggaaatccactagtgtagtccttattctaaagttctcggcaaactcttcgtttacaacttaagacctaggacctgctcg 10038762  T
Q  130 tactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaatt 222  Q
    |       ||  |||||||||||| |||||||||||| ||||||| |||||||||  | |||||   |||||||||| ||||||| |||||||    
T  10038761 tc------ta--gacttcaacctaagaactcctagatctgagatcccatctcactatcctacaatcaatcacagcccctgtgattatcaaatt 10038677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12505702 - 12505766
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tct-gggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||| ||||    
T  12505702 taacccagttcggtgtaacgtcacctacatctggggggctaccaagctaggaaggaaatctacta 12505766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 181
Target Start/End: Original strand, 23956907 - 23957045
Alignment:
Q  35 ggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac--taatgacctaggacctacccgtac 132  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| | || ||| |||||||  | ||||| ||   | | ||||||||||||||||||      
T  23956907 ggctaccaagccaggaagaaaatccactagtgtagtccttattctaaagttctcagcaaac--cacgtttacaactttaagacctaggacctacccgtc- 23957003  T
Q  133 tgccgtactgacttcaacctatgaactcctagatatgagatctcatctc 181  Q
         ||  |||||||||||| |||||||||||| ||||||||||||||    
T  23957004 -----ta--gacttcaacctaggaactcctagatctgagatctcatctc 23957045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26195620 - 26195518
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||| |||| |||| ||||| |||| ||| ||||| | || ||| |||||| ||||    
T  26195620 taacccagttcggtgcaac-tcacctacatctggaggctaccaagccaagaagaaaattcactactgtattccttattcta-agttctcagcaaattcct 26195523  T
Q  100 cgttt 104  Q
    |||||    
T  26195522 cgttt 26195518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4547909 - 4547851
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatcc 59  Q
    ||||||| |||| ||||||  |||||||||| ||||||| |||||||||||||||||||    
T  4547909 taacccaattcgatgcaacagcacctactctaggggctatcaagccaggaaggaaatcc 4547851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10260293 - 10260231
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccact 62  Q
    |||| |||||||||||||| |||||| | ||||||||||||||| ||||||||||||| ||||    
T  10260293 taactcagttcggtgcaacttcaccttcatctgggggctaccaaaccaggaaggaaattcact 10260231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 11407091 - 11407041
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    ||||||||||||||||||||| |||||||||||| ||| ||| ||||||||    
T  11407091 cacctactctgggggctaccatgccaggaaggaagtccgctaatgtagtcc 11407041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 19353147 - 19353193
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgta 68  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  19353147 cacctactctgagggctactaagccaagaaggaaatccactagtgta 19353193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 21260532 - 21260614
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 104  Q
    ||||||||||||||||||||||   |||||| ||||||| ||||||||||| ||||| | || ||| | |||||| |||||||    
T  21260532 cacctactctgggggctaccaacttaggaagaaaatccattagtgtagtccttattctaaagttctcaacaaactactcgttt 21260614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 31269090 - 31269044
Alignment:
Q  138 tactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||    
T  31269090 tactgatttcaacctaggaactcctagatctgagatctcatctcact 31269044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 14687384 - 14687433
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 71  Q
    |||||||| ||| ||||||||||| ||||||||||| |||||||||||||    
T  14687384 cacctactatggaggctaccaagctaggaaggaaattcactagtgtagtc 14687433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 23057328 - 23057377
Alignment:
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||||| || | |||||||||||| |||||||||||||||||    
T  23057328 ccgtactgacttcagccgaggaactcctagatttgagatctcatctcact 23057377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12484272 - 12484336
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggg-gctaccaagccaggaaggaaatccacta 63  Q
    ||||| ||||||||| |||||||||||| ||||||| |||||||||| |||||||||||| ||||    
T  12484272 taaccaagttcggtgtaacgtcacctacatctggggggctaccaagctaggaaggaaatctacta 12484336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5299142 - 5299205
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    |||||||||| ||| |||| || ||||  ||| |||||||||||||||||||||||||||||||    
T  5299142 taacccagtttggtacaacatcgcctagatctaggggctaccaagccaggaaggaaatccacta 5299205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 7508562 - 7508605
Alignment:
Q  141 tgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||    
T  7508562 tgacttcaacctaggaactcctagatctgagatcccatctcact 7508605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9732899 - 9732836
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    |||| |||||| |||||||||||||||  ||||||||||||||||||| ||| ||||| |||||    
T  9732899 taactcagttcagtgcaacgtcacctagatctgggggctaccaagccatgaacgaaattcacta 9732836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 23296631 - 23296674
Alignment:
Q  141 tgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||    
T  23296631 tgacttcaacctaggaactcctagatctgagatcccatctcact 23296674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 26132942 - 26132903
Alignment:
Q  145 ttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  26132942 ttcaacctaggaactcctagatctgagatctcatctcact 26132903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 14687492 - 14687538
Alignment:
Q  138 tactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||||||| |||||||||||| ||||||  |||||||||    
T  14687492 tactgacttcaacctaggaactcctagatctgagattccatctcact 14687538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 24902234 - 24902276
Alignment:
Q  142 gacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||| |||||||||||| ||||||| |||||||||    
T  24902234 gacttcaacctaggaactcctagatctgagatcccatctcact 24902276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 10660986 - 10661034
Alignment:
Q  136 cgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  10660986 cgtattgatttcaacctaggaactcctagatctgagatcccatctcact 10661034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 11406986 - 11406938
Alignment:
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcac 183  Q
    ||||| ||||||||||||| |||||||||||| ||||||  ||||||||    
T  11406986 ccgtattgacttcaacctaggaactcctagatctgagattccatctcac 11406938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 8749035 - 8749316
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||| ||| ||||||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  8749035 taacccaattcagtgcaacgttagctactctggggactaccaagctaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaagctcctc 8749134  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||||||||||||| |||||||||||         ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  8749135 gtttgcactaatgacctaggatctacccgtacta--------acttcaacctaggaactcctagatctgagatctcatctcactcccttacaactgatca 8749226  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    || ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||    
T  8749227 caacccctgtgattctcaaattacaaacacaatgaaatgaagttaccttcaaacaaaacaactaaacaccgtaattcacagcttaggtgc 8749316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 9036703 - 9036984
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  9036703 taacccagttcggtgcaacatcacatactctgggggctaccaaaccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctc 9036802  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||| ||||||||||||||        ||||| ||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||    
T  9036803 gtttgcactaaagacctaggacctac--------ccgtattgacttcaacctaggaactcctagatctgagatcccatctcactcccttacaattgatca 9036894  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    || ||| ||||||||||||||| ||||  |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  9036895 caacccctgtgattctcaaattacaaattcaatgaaatgaagttaccatcaaacaaaacaactaaacaccgtacttcacagcttaggtgc 9036984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 9031544 - 9031321
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  9031544 taacccagttcggtgcaacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctc 9031445  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||||  |||||||||||||||||||||||        ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||    
T  9031444 gtttgtgctaatgacctaggacctacccgt--------actgacttcaacctaggaactcctagatctgagatcccatctcactcccttacaattgatca 9031353  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaa 232  Q
    || ||| ||||||||||||||| |||||||||    
T  9031352 catcccctgtgattctcaaattacaaacacaa 9031321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 13917839 - 13918041
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||  ||||||| |||||| |||||    
T  13917839 taacccaattcggtgcaacgtcacctactctgggggctaccaagcca-gaaggaaatccaatagtgtactccttattctctagctctcagcaaattcctc 13917937  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||| |||||| ||||||||||||||        | || |||||||||||||| ||||||||||||||||||| ||||||||||||| || |||  ||||    
T  13917938 gtttacactaaagacctaggacctac--------ctgtcctgacttcaacctaggaactcctagatatgagatttcatctcactccc-taaaaccaatca 13918028  T
Q  201 cagcccgtgtgat 213  Q
    |||||| ||||||    
T  13918029 cagcccctgtgat 13918041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 17702426 - 17702578
Alignment:
Q  25 ctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  17702426 ctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacc 17702525  T
Q  124 tacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||      ||  ||||| |||||| |||||||||||| ||||||| |||||||||    
T  17702526 tacccgta------ta--gacttaaacctaggaactcctagatctgagatcccatctcact 17702578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 295477 - 295586
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| |||||| |||||||||    
T  295477 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 295576  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  295577 cctacccgta 295586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 7479299 - 7479096
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  7479299 taactcagttcggtgcaacgtcgcctaatctgggggctaccaagccagga-ggaaatccactagtgtagtccttattctctagctctcagcaaactcctc 7479201  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||| |||||| ||||||||||||||        || || |||||||||| |||||| |||||||| ||||||| |||||| ||||| ||||||  ||||    
T  7479200 gtttacactaaagacctaggacctac--------ccatattgacttcaacatatgaagtcctagatctgagatcccatctccctccc-tacaaccaatca 7479110  T
Q  201 cagcccgtgtgatt 214  Q
    || ||| |||||||    
T  7479109 catcccctgtgatt 7479096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 13913787 - 13914038
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||| |||||  ||||||| ||||||||||||    
T  13913787 taacccggttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccgctagtgtactccttattctctagctctcagcaaactcctc 13913885  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||| |||||| ||||||||| ||||        ||||  | ||||||||||| |||||||||||| |||||| ||||||||||||| || |||  ||||    
T  13913886 gtttacactaaagacctaggatctac--------ccgttttaacttcaacctaggaactcctagatctgagatttcatctcactccc-tagaaccaatca 13913976  T
Q  201 cagcccgtgtgattctcaaattgcaaacac-----aatgaaatgaagttaccttcaaacaaa 257  Q
    |||||| ||||||  |||  || |||||||     ||| | |||||||||||||||||||||    
T  13913977 cagcccctgtgatcatcaggttacaaacacaaacaaatcagatgaagttaccttcaaacaaa 13914038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 6581030 - 6580854
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||||||||||| |||   |||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  6581030 taacccagttcggtgacaaacacacctactctgaaggctaccaagccagcaaggaaatccactagtgtagtccttattctatagctctcagcaaactcct 6580931  T
Q  100 cgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| |||||| |||||||||||||||        |||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  6580930 cgtttacactaaagacctaggacctacc--------cgtattgatttcaacctaggaactcctagatctgagatcccatctcact 6580854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 18547665 - 18547775
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||| ||||| |||||||| |    
T  18547665 cacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattcaatagctcttggcaaactcctcgtttacactatatgacctaag 18547764  T
Q  121 acctacccgta 131  Q
    |||||||||||    
T  18547765 acctacccgta 18547775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 13790696 - 13790851
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||| ||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  13790696 cacctactatgggggctaccaagccaagaaggaaatatactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 13790795  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  13790796 acctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 13790851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 15636015 - 15635860
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||| ||||| |||| |||||    
T  15636015 cacctactctgggggctaccaagccaggaaggaaattcactagtgtagtccttattcaatagctctcagtaaactcctcgtttacactatatgatctagg 15635916  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||| ||| |||||||||||||||||||| |||| ||||    
T  15635915 acctacccgta------ta--gacttcaaactaggaactcctagatatgagatcccatcacact 15635860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 28051153 - 28051307
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||||| |||||| | |||||||    
T  28051153 cacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaaggcctagga 28051252  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    | |||        | ||| ||| ||||||||| |||||||||||| |||||||||||||||||    
T  28051253 catac--------ctgtattgatttcaacctaggaactcctagatctgagatctcatctcact 28051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 8224854 - 8224966
Alignment:
Q  21 tcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgaccta 118  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||    
T  8224854 tcacctacatctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgaccta 8224953  T
Q  119 ggacctacccgta 131  Q
     ||||||||||||    
T  8224954 agacctacccgta 8224966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 18064369 - 18064193
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||||||||||| |||   |||||||||| | |||||||||| ||||||||||||||||||||||||||| ||||| |||||||| | |||||||||    
T  18064369 taacccagttcggtgacaaacacacctactctagaggctaccaaggcaggaaggaaatccactagtgtagtccttattctatagctctcaacaaactcct 18064270  T
Q  100 cgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| |||||| |||||||||||||         ||||| ||| ||||||||| |||||||||||| |||||||||||||||||    
T  18064269 cgtttacactaaagacctaggaccta--------accgtattgatttcaacctaggaactcctagatctgagatctcatctcact 18064193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 7496090 - 7495921
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||| |||||||||||||| || |||| | ||||||||| |||||||||| ||||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  7496090 taactcagttcggtgcaacatcgcctaatttgggggctatcaagccagga-ggaaatccactagtgtagtccttattctctagctctcagcaaactcctc 7495992  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatc 179  Q
    |||| |||||| ||||||||||||||        || || ||||||||||||| |||||||||||| ||||||| ||||    
T  7495991 gtttacactaaagacctaggacctac--------ccatattgacttcaacctaggaactcctagatctgagatcccatc 7495921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 17042895 - 17042786
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||| |||||||| | ||||||||||||||  ||||| |||||||||    
T  17042895 cacctactctggaggctaccaaggcaggaaggaaatccactagtgtagtccttattctatagctctcaacaaactcctcgtttaaactaaagacctagga 17042796  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  17042795 cctacccgta 17042786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 23954699 - 23954544
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||||| |||||||||||||||||||||||||| |||| |||||  |||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  23954699 cacctactctggaggctaccaagccaggaaggaaatccattagtttagtcattattcaatagctctcagcaaactcctcgtttacactatatgacctagg 23954600  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||| |||      ||   ||||||||||| |||||||||||| ||||||| |||||||||    
T  23954599 acctacctgta------ta--tacttcaacctaggaactcctagatttgagatcccatctcact 23954544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 24195541 - 24195695
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||| ||||||||||    
T  24195541 cacctactctgggg-ctaccaagccaagaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcatttacactatatgacctagg 24195639  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    | ||||| |||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  24195640 agctacctgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 24195695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 11558460 - 11558308
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||  || ||||||||||||||||||||||    
T  11558460 cacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattcaaaagctttcagcaaa--ccacgtttgcactaatgacctagga 11558363  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactccc 187  Q
    ||||||           ||||| ||||||||| |||||||||||| ||||||| ||||||||||||    
T  11558362 cctacc-----------actgatttcaacctaggaactcctagatttgagatcccatctcactccc 11558308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 11567729 - 11567577
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||  || ||||||||||||||||||||||    
T  11567729 cacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattcaaaagctttcagcaaa--ccacgtttgcactaatgacctagga 11567632  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactccc 187  Q
    ||||||           ||||| ||||||||| |||||||||||| ||||||| ||||||||||||    
T  11567631 cctacc-----------actgatttcaacctaggaactcctagatttgagatcccatctcactccc 11567577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11656017 - 11656148
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||| ||||||| |||||||||||||| |||||||||| |||||| ||||| |||||||||||||| ||| ||| |||||| ||||||||||||    
T  11656017 taacccagtttggtgcaatgtcacctactctggaggctaccaagtcaggaaagaaattcactagtgtagtccttatccaaaagctctcagcaaactcctc 11656116  T
Q  101 gtttgcac-taatgacctaggacctacccgta 131  Q
    |||| ||| | |||||||||||||| ||||||    
T  11656117 gtttacactttatgacctaggacctgcccgta 11656148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18035059 - 18034928
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||||||||||| |||   |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||| |||| ||| |||||||||||    
T  18035059 taacccagttcggtgacaaacacacctactcttgaggctaccaagccaggaaggaaatccactagtgtagtccttattctataggtctcagcaaactcct 18034960  T
Q  100 cgtttgcactaatgacctaggacctacccgta 131  Q
    | ||| ||| || |||||||||||||||||||    
T  18034959 catttacaccaaagacctaggacctacccgta 18034928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20748326 - 20748200
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||| || |||||| | ||||||| ||    
T  20748326 taacccagttcggtgcaacatcacctactttgggg-ctaccaagccaggaaggaaatccactagtgtagtccttattgaaaagctctcaacaaactcatc 20748228  T
Q  101 gtttgcac-taatgacctaggacctacc 127  Q
    |||| ||| | |||||||||||||||||    
T  20748227 gtttacactttatgacctaggacctacc 20748200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 19633915 - 19634012
Alignment:
Q  34 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 131  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| |||||| ||  |||||||||||||||    
T  19633915 gggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagatataggacctacccgta 19634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 44452515 - 44452650
Alignment:
Q  40 ccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgt 138  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||| ||||| |||||| | ||||||||||||      |    
T  44452515 ccaagccaggaaggaaatccactagtgtagttcttattcaatagctctcagcaaactcctcgtttacactatatgacccatgacctacccgta------t 44452608  T
Q  139 actgacttcaacctatgaactcctagatatgagatctcatctca 182  Q
    |  |||||||||||| |||||||||||| ||||||| |||||||    
T  44452609 a--gacttcaacctaggaactcctagatctgagatcccatctca 44452650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12054610 - 12054485
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||| |||||||||||| |||| ||||||||  ||| ||||||| || |||||||||| |||||  ||||||| ||||||||||||    
T  12054610 taacccagttcggtgcaatgtcacctactctaggggataccaagctcgga-ggaaatctacaagtgtagtccttattctctagctctcagcaaactcctc 12054512  T
Q  101 gtttgcactaatgacctaggacctacc 127  Q
    |||| |||||| ||||| |||||||||    
T  12054511 gtttacactaaagaccttggacctacc 12054485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 13524823 - 13524714
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||||||| ||||| |||| ||| |||||||||||| ||| |||||| ||||||| |    
T  13524823 cacctactctgggggctaccaagtcaagaaggaaatccactggtgtagtccttattctatagttctcagcaaactcctcatttacactaaagacctagta 13524724  T
Q  122 cctacccgta 131  Q
    |||| |||||    
T  13524723 cctatccgta 13524714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 18476926 - 18477055
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    |||||||||||||  |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| | |||||| |||||||||||    
T  18476926 taacccagttcggcacaac-tcacctacatctgggg-ctaccaagccaggaaggaaatccactagtgtagtccttattctaaagctctcagcaaactcct 18477023  T
Q  100 cgtttgcactaatgacctaggacctacccgta 131  Q
    ||||| |||| | ||| || ||||||| ||||    
T  18477024 cgtttacacttaagacataagacctactcgta 18477055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 19532025 - 19531950
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactc 97  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||||||    
T  19532025 cacctactttgggggctaccaagccaggaaggaaatccactagtgtcgtccttattcaatagctctcagaaaactc 19531950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 184
Target Start/End: Complemental strand, 21719054 - 21718913
Alignment:
Q  35 ggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactg 134  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | || | | | |||| ||||||||| |||| | ||||||||| |||||||| ||     
T  21719054 ggctaccaagccaggaaggaaatccactagtgtagtccttattctaaagttttcaacaaaatcctcgtttacacttaagacctaggatctacccgt-ct- 21718957  T
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
           ||||| |||||| |||||||||||| |||||||||||||||||    
T  21718956 ------agactttaacctaggaactcctagatctgagatctcatctcact 21718913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 1919367 - 1919281
Alignment:
Q  33 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgaccta 118  Q
    ||||||||||||||| ||||||||||||||  |||||||| |||||||||||| | ||||||||| |||||| ||||| ||||||||    
T  1919367 ggggctaccaagccaagaaggaaatccactgatgtagtccttattcaatagctttcagcaaactcttcgtttacactatatgaccta 1919281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 31649708 - 31649814
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 120  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||||| |||||  ||| ||| |||||||||||||||| | |||   ||||||||    
T  31649708 cacctactctgggt-ctaccaagccaggaaggaaatccactcgtgtagtccttattc--tagttctcagcaaactcctcgtttacaactctagacctagg 31649804  T
Q  121 acctacccgt 130  Q
    ||||||||||    
T  31649805 acctacccgt 31649814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 15686299 - 15686226
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 95  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| | || ||| |||||||    
T  15686299 cacctactctaggggctaccaagccaggaaggaaatccattagtgtagtccttattctaaagttctcagcaaac 15686226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 3552355 - 3552274
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 104  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||| | || ||| | ||||||||||||||    
T  3552355 cacctactcttggggctaccaagccaggaagaaaatccagtagtgtagtccttattcta-agttctaaacaaactcctcgttt 3552274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10082437 - 10082375
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccact 62  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  10082437 taacccagttcggtgcaacgtcacctacatctaggggctaccaagctaggaaggaaattcact 10082375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 20976147 - 20976090
Alignment:
Q  7 agttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  20976147 agttcggtgcaacttcacctacatctgggggctaccaaaccaggaaggaaatccacta 20976090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8531387 - 8531450
Alignment:
Q  1 taacccagttcggtgcaacgtcaccta-ctctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||||||||||||||||||||| |||||| |||  ||||||||| ||||||||||||||    
T  8531387 taacccagttcggtgcaacgtcacctacctctggtggcatccaagccagaaaggaaatccacta 8531450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10189362 - 10189299
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    |||||||||||||||||||||||||||| | | ||||||||||||| ||||||||||| |||||    
T  10189362 taacccagttcggtgcaacgtcacctacatgtaggggctaccaagctaggaaggaaattcacta 10189299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 980506 - 980456
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    |||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  980506 cacctattttgggggctaccaagcaaggaaggaaatccactagtgtagtcc 980456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 215382 - 215333
Alignment:
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  215382 ccgtattgacttcaacctaggaacttctagatatgagatctcatctcact 215333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 21094842 - 21094787
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 78  Q
    |||||||||||||| |||||||| |||||||||||| |||||||||||||| |||||    
T  21094842 cacctactctgggg-ctaccaagtcaggaaggaaattcactagtgtagtccttattc 21094787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14406793 - 14406722
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 71  Q
    ||||||||||||||| |||   |||||||| || |||||||||||||||||||||||||||| | |||||||    
T  14406793 taacccagttcggtgacaaacacacctactttgtgggctaccaagccaggaaggaaatccaccaatgtagtc 14406722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 287030 - 286807
Alignment:
Q  26 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt-gcactaatgacctaggacct 124  Q
    |||| ||||| ||||||| ||||||||||||||||||||| |||||| ||||| |  | ||| || |||||||| ||||   ||  | ||||||||||||    
T  287030 tactatggggactaccaaaccaggaaggaaatccactagtatagtccttattctaatgttctcaggaaactccttgtttataacacaagacctaggacct 286931  T
Q  125 acccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgc 224  Q
    |||||| ||        || ||||||||| |||||||||||| ||||||| |||||||||  | ||  ||  |||||| ||| ||||||| ||| |||      
T  286930 acccgt-ct-------agatttcaacctaggaactcctagatctgagatcccatctcactatcctaacaccaatcacaacccctgtgattatcagattca 286839  T
Q  225 aaacacaatgaaatgaagttaccttcaaacaaa 257  Q
    ||||||||  | |||||||||||||||||||||    
T  286838 aaacacaa-aagatgaagttaccttcaaacaaa 286807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 14406665 - 14406616
Alignment:
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||| |||||||| |||||||||||| ||||||| |||||||||    
T  14406665 ccgtactgacctcaacctaagaactcctagatctgagatcccatctcact 14406616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8147704 - 8147641
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||| ||||||||||| ||||||   ||| ||||||||||||||||||||||||| |||||    
T  8147704 taacccaattcggtgcaacttcacctttatctaggggctaccaagccaggaaggaaattcacta 8147641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 21094730 - 21094619
Alignment:
Q  143 acttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaa-acacaatgaaatgaa 241  Q
    ||||||||||| |||||||||||| ||||||| | |||||||  | ||||| | |||||||||| | ||||| ||| |||  || ||| ||||||  |||    
T  21094730 acttcaacctaggaactcctagatctgagatcccgtctcactatcctacaattaatcacagcccctatgattatcatatttaaacacaaaatgaa--gaa 21094633  T
Q  242 gttaccttcaaaca 255  Q
    ||||||||||||||    
T  21094632 gttaccttcaaaca 21094619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 3445146 - 3445098
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 71  Q
    ||||||||||| || ||| |||| ||||||||||||||||||||||||||    
T  3445146 cacctactctgagg-ctatcaagtcaggaaggaaatccactagtgtagtc 3445098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 18483444 - 18483403
Alignment:
Q  91 caaactcctcgtttgcacta-atgacctaggacctacccgta 131  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  18483444 caaactcctcgtttacactatatgacctaggacctacccgta 18483403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 40199885 - 40199922
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggct 38  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  40199885 taacctagttcggtgcaacgtaacctactctgggggct 40199922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42243786 - 42243831
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagc 45  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||    
T  42243786 taacccagttcggtgcaacatcacctacatcttggggctaccaagc 42243831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 20962214 - 20962162
Alignment:
Q  12 ggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    |||||||| |||||||| |||||||| ||||||| ||||||||||| ||||||    
T  20962214 ggtgcaacttcacctacatctgggggttaccaagtcaggaaggaaagccacta 20962162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 21254097 - 21254029
Alignment:
Q  60 actagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacc 127  Q
    ||||||||||||| ||||| |||| ||| | |||||||||||||  | ||||| |||||||||||||||    
T  21254097 actagtgtagtccttattctatagttctcaacaaactcctcgttcacaactaaagacctaggacctacc 21254029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-100; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 7898078 - 7897796
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  7898078 taacccagttcggtgcaacgtcacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctc 7897979  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||    
T  7897978 gtttgcactaatgacctaggacctacccgt--------actgacttcaacctaggaactcttagatctgagatcccatctcactcccttacaactgatca 7897887  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    |||||| |||||| |||||||| |||| |||||  |||||||||||||||||||||| |||||| || ||||||||||| ||||| |||||    
T  7897886 cagcccctgtgatactcaaattacaaatacaatcaaaatgaagttaccttcaaacaacacaactgaacaccgtacttcacagctttggtgc 7897796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 17920947 - 17920666
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  17920947 taacccagttcggtgcaacgtcacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaaaagctctcagcaaactcctc 17920848  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||| ||||||||||||||||||||        ||||||||||||||| |||||||||||| ||||||| ||||| ||||| |||||||||||||    
T  17920847 gtttgcacttatgacctaggacctacccgt--------actgacttcaacctaggaactcctagatctgagatcccatcttactcctttacaactgatca 17920756  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    |||||| |||||| ||| || | |||| |||||  |||||||||||||||||||||| |||||| || ||||||||||| ||||| |||||    
T  17920755 cagcccctgtgatactc-aagtacaaatacaatcaaaatgaagttaccttcaaacaacacaactgaacaccgtacttcacagctttggtgc 17920666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 20498317 - 20498033
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  20498317 taacccagttcggtgcaacgtcacctactctggaggctaccaagtcaggaaggaaatccactcgtgtagtccttattcaatagctctcagcaaactcctc 20498218  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||||||||| ||||||||||||||||        ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  20498217 gtttgcactatatgacctaggacctac--------ccgtactgacttcaacctaggaactcctagatctgagatctcatctcactcccttacaactgatc 20498126  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaac-aaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    ||||||| |||||| |||||||  |||| |||||  |||||||||||||||||||| |||||||||  | ||||||||||  ||||| |||||    
T  20498125 acagcccttgtgatactcaaataacaaatacaatcaaaatgaagttaccttcaaacaaaaacaactggacaccgtacttcgcagctttggtgc 20498033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 26183398 - 26183144
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| |||    
T  26183398 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatacactagtgtagtccttattcaatagctctcagcaaacttctc 26183299  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||||||||| ||||||||| ||||||        ||||||||||||||||||| |||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  26183298 gtttgcactatatgacctagaacctac--------ccgtactgacttcaacctaggaactcctagatctgagatcccatctcactcctttaaaactgatc 26183207  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaa 261  Q
    ||||||| |||||| |||||||  |||  |||||  ||||||||||||||| |||||||||||    
T  26183206 acagcccctgtgatactcaaataacaattacaatcaaaatgaagttacctttaaacaaaacaa 26183144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 20741100 - 20740849
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  20741100 taacccaattcggttcaacgtcacctactctgggggctaccaagcgaggagggaaatccactagtgtagtccttattctctagctctcagcaaactcctc 20741001  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||| |||||| ||||||||||||| |||| ||       ||||||||||||| |||||||||||| |||||||||||||||||||| ||||||  ||||    
T  20741000 gtttacactaaagacctaggacctatccgt-ct-------tgacttcaacctaggaactcctagatctgagatctcatctcactccc-tacaaccaatca 20740910  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaa--atgaagttaccttcaaacaaaac 259  Q
    |||| | ||||||| |||| ||   |||||||  ||  ||||||| |||||||||||||||    
T  20740909 cagctcttgtgattatcaagttatcaacacaacaaaagatgaagtaaccttcaaacaaaac 20740849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 20845958 - 20845782
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||| ||||||||||||    
T  20845958 taacccagttcggtgcaacgtcacctactatgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaaaatctctcagcaaactcctc 20845859  T
Q  101 gtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||| ||| | |||||||||||||||||||| ||        |||||||||||| |||||||||||| |||||||| ||||||||    
T  20845858 gtttacactttatgacctaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagatcttatctcact 20845782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 22130997 - 22130877
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||  ||||||| ||||||||||||    
T  22130997 taacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtgtaatccttattctctagctctcagcaaactcctc 22130899  T
Q  101 gtttgcactaatgacctaggac 122  Q
    |||| |||||| ||||||||||    
T  22130898 gtttacactaaagacctaggac 22130877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 22404904 - 22404749
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  22404904 cacctgctctaggggctaccaagccaggaaggaaatccactagtatagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 22404805  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  22404804 acctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 22404749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 26036827 - 26036936
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||| |||||| |||||| |||||||||    
T  26036827 cacctactctgggggctaccaagccaggaaggaaatccactagtgttgtccttattctatagctctcagcaaactcatcgtttacactaaagacctagga 26036926  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  26036927 cctacccgta 26036936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 26329356 - 26329202
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||| |||||||| |||||||||||||||| |||||| |||||||||    
T  26329356 cacctactctgtgagctaccaagccaggaaggaaatccactggtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 26329257  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||        |||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  26329256 cctacc--------cgtattgatttcaacctaggaactcctagatctgagatcccatctcact 26329202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 30605833 - 30605679
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||| |||||| |||||||||    
T  30605833 cacctactctgggggctaccaatccaggaaggaaatccactagtgcagtccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 30605734  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||        || || ||| ||||| ||| |||||||||||| |||||||||||||||||    
T  30605733 cctac--------ccatattgatttcaatctaggaactcctagatctgagatctcatctcact 30605679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 24189883 - 24190034
Alignment:
Q  26 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacct 124  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||  |||||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  24189883 tactctgggggctaccaagccgggaaggaaattcactagtgtagtctttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacct 24189982  T
Q  125 acccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||      ||  |||||||||||| |||||| ||||| ||||||| |||||||||    
T  24189983 acccgta------ta--gacttcaacctaggaactcatagatctgagatcccatctcact 24190034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 23420704 - 23420594
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||| ||||||||||    
T  23420704 cacctactctaagggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcatttacactatatgacctagg 23420605  T
Q  121 acctacccgta 131  Q
    |||||||||||    
T  23420604 acctacccgta 23420594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 25105563 - 25105453
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||||| || |||||||||||| ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||| ||||| ||||||||||    
T  25105563 cacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctttcagcaaactcctcgtttacactatatgacctagg 25105464  T
Q  121 acctacccgta 131  Q
    |||||||||||    
T  25105463 acctacccgta 25105453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 25164656 - 25164546
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||||| || |||||||||||| ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||| ||||| ||||||||||    
T  25164656 cacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctttcagcaaactcctcgtttacactatatgacctagg 25164557  T
Q  121 acctacccgta 131  Q
    |||||||||||    
T  25164556 acctacccgta 25164546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 13735116 - 13734961
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctagg 120  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||| ||| | ||||||||||    
T  13735116 cacctactctgggggttaccaagtcaggaaggaaatccattagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagg 13735017  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||| ||        |||||||||||| |||||||||||| ||||||| |||||||||    
T  13735016 acctacccgt-ct-------agacttcaacctaggaactcctagatctgagatcccatctcact 13734961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 259
Target Start/End: Complemental strand, 13942140 - 13941912
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 120  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| | || ||| |||||||||||||||| | ||| |  |||||||    
T  13942140 cacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaactcctcgtttacaacttaaaacctagg 13942041  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaa 220  Q
    |||||||||| || |       ||||||||||| |||||||||||| ||||||| ||||||| |  | |||||   |||||| ||| ||||||||||| |    
T  13942040 acctacccgt-ctac-------acttcaacctaggaactcctagatctgagatcccatctcattatcctacaatcaatcacaacccctgtgattctcaga 13941949  T
Q  221 ttgcaaacacaatgaaatgaagttaccttcaaacaaaac 259  Q
    ||  ||||||||    |||||||||||||||||||||||    
T  13941948 tt--aaacacaaaatgatgaagttaccttcaaacaaaac 13941912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 22246478 - 22246384
Alignment:
Q  38 taccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 131  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||  ||||||||||||||||||||    
T  22246478 taccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatttgacctaggacctacccgta 22246384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 23623894 - 23624048
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||  ||||| |||||||| |||||||||||| ||| ||||||  ||||||||    
T  23623894 cacctactctgggggctactaacctaggaaggaaatccactagtgtagtcgttattctatagctctcagcaaactcctcatttacactaaatacctagga 23623993  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||        ||||| ||| ||||||||| |||||| ||||| |||||||||||||||||    
T  23623994 cctac--------ccgtattgatttcaacctaggaactcttagatttgagatctcatctcact 23624048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 13338587 - 13338762
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||||||||||| |||   ||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||||| ||| |||| |||||||||||    
T  13338587 taacccagttcggtgacaaacacacatactctgggg-ctaccaagccaggaaggaaatccactagtgtaatccttattctataactctcagcaaactcct 13338685  T
Q  100 cgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| |||||| |||||||||| |||        | ||| ||| ||| ||||| |||||||||||| |||||||||||||||||    
T  13338686 cgtttacactaaagacctaggacatac--------cggtattgatttctacctaggaactcctagatctgagatctcatctcact 13338762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 18221127 - 18221281
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||||||||| ||||| |||||||| | |||||| ||||||| |||||| |||||||||    
T  18221127 cacctactttggggtctaccaagccaagaaggaaatccactagtgtagtccttattccatagctctcaccaaacttctcgtttacactaaagacctagga 18221226  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
     ||||        | ||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  18221227 gctac--------cagtattgagttcaacctaggaactcctagatctgagatcccatctcact 18221281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11204717 - 11204781
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11204717 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 11204781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 184
Target Start/End: Complemental strand, 22184758 - 22184586
Alignment:
Q  4 cccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgt 102  Q
    ||||||||||  |||| |||||||| ||| |||||||||||||||||||||||||||| |||| ||||||| |||| | |||||| ||||||||||||||    
T  22184758 cccagttcggcacaac-tcacctacatctaggggctaccaagccaggaaggaaatccattagtctagtccgaattctaaagctctcagcaaactcctcgt 22184660  T
Q  103 ttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    || |||| | |||||| |||||||        ||| | ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  22184659 ttacacttaagacctatgacctac--------ccgcattgatttcaacctaggaactcctagatctgagatcccatctcact 22184586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 22252162 - 22252074
Alignment:
Q  44 gccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 131  Q
    ||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||| ||||| |||||||||||||||||||||    
T  22252162 gccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttacactatatgacctaggacctacccgta 22252074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 20714879 - 20714724
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 120  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||||| ||||| |  | ||| |||||||||||||||| | ||  | ||||||||    
T  20714879 cacctactctgagggctaccaagtcaggtaggaaatccactagtgtagtccttattctaatgttctcagcaaactcctcgtttacaacacaagacctagg 20714780  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||        ||||| ||| ||||||||| |||||||||||| |||||| ||||||||||    
T  20714779 acctac--------ccgtattgatttcaacctaggaactcctagatctgagatttcatctcact 20714724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24394627 - 24394690
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||| |||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  24394627 taacccatttcggtgcaacgtcacctacatctgggggcatccaagccaggaaggaaatccacta 24394690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 24117614 - 24117667
Alignment:
Q  24 cctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 77  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  24117614 cctactctggtggctaccaagccaggaatgaaatccactagtgtagtccttatt 24117667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 9522561 - 9522705
Alignment:
Q  31 tgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgt 130  Q
    |||||||||||||| || ||||||||| |||||||||||||| ||||| | || | | | |||||||||| ||| |    | ||||||||||||||||||    
T  9522561 tgggggctaccaagtcaagaaggaaattcactagtgtagtccttattcta-agttatcaacaaactcctcttttac----aagacctaggacctacccgt 9522655  T
Q  131 actgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |      || ||||||||||||| |||||||||||| ||||||| |||||||||    
T  9522656 a----tatattgacttcaacctaggaactcctagatctgagatcccatctcact 9522705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 22130879 - 22130790
Alignment:
Q  142 gacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaa 232  Q
    ||||||||||||  ||||||||||| ||||||| |||||||||||| ||||||  |||||||||| ||||||| |||  || |||||||||    
T  22130879 gacttcaacctagaaactcctagatctgagatcccatctcactccc-tacaaccaatcacagcccctgtgattatcaggttacaaacacaa 22130790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 15116789 - 15116850
Alignment:
Q  3 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||| ||||||| |||||||| |||||||||||||||| |||||||||||| |||||    
T  15116789 acccagttcagtgcaacctcacctacgtctgggggctaccaagtcaggaaggaaattcacta 15116850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17661575 - 17661503
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    ||||||||||||||| |||   |||||||| |||||||||||||||| |||||||||| ||||||||| ||||    
T  17661575 taacccagttcggtgacaaacacacctactatgggggctaccaagcctggaaggaaattcactagtgttgtcc 17661503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 9422546 - 9422505
Alignment:
Q  143 acttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  9422546 acttcaacctatgaactcctagatctgagatcccatctcact 9422505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 22979868 - 22979917
Alignment:
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| ||||||||||||| |||||| ||||| |||||||||||||||||    
T  22979868 ccgtattgacttcaacctaggaactcttagatctgagatctcatctcact 22979917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 20127026 - 20127093
Alignment:
Q  36 gctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 104  Q
    |||||||| | |||||||||||||||||||||| ||| ||||| | || ||| ||||||||||||||||    
T  20127026 gctaccaatctaggaaggaaatccactagtgtaatccttattcta-agttctcagcaaactcctcgttt 20127093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 9422592 - 9422549
Alignment:
Q  40 ccaagccaggaaggaaatccactagtgtagtccgtattcaatag 83  Q
    ||||| |||||||||||||||||||||| |||| ||||||||||    
T  9422592 ccaagtcaggaaggaaatccactagtgttgtccttattcaatag 9422549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22979740 - 22979811
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    ||||||||||||||| |||   |||||||| ||||| ||||||||| |||||| |||| ||||||||||||||    
T  22979740 taacccagttcggtgacaaacacacctactatgggg-ctaccaagcaaggaagcaaatacactagtgtagtcc 22979811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 178; Significance: 6e-96; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 25354799 - 25354517
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||     
T  25354799 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagttcgtattcaatatctctcagcaaactcctt 25354700  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  25354699 gtttgcactaatgacctaggacctacccgt--------actgacttcaacctaggaactcctagatttgagatcacatctcactcccttacaactgatca 25354608  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    |||||| |||||| |||||||  |||| |||||  |||||||||||||||||||||| |||||| || | ||||||||| ||||| |||||    
T  25354607 cagcccctgtgatactcaaataacaaatacaatcaaaatgaagttaccttcaaacaatacaactgaacatcgtacttcacagctttggtgc 25354517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 23541239 - 23541520
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23541239 taacccagttcggtgcaacgtcacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctc 23541338  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||| ||||||||||||||        |||||||||||||||||   ||||  |||||| |||||||||||||||||||||||||||||||||    
T  23541339 gtttgcactaaagacctaggacctac--------ccgtactgacttcaacccgggaacaactagatctgagatctcatctcactcccttacaactgatca 23541430  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtg 289  Q
     ||||| |||||| |||||||  |||| |||||  ||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||    
T  23541431 tagcccctgtgatactcaaataacaaatacaatcaaaacgaagttaccttcaaacaaaacaactaaacaccgtacttcacaacttaggtg 23541520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 24143130 - 24143406
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  24143130 taacctagttcggtgcaacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaaatcctc 24143229  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||||||||||||||||||        |||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  24143230 gtttgcactaatgacctaggacctac--------ccgtactgactttaacctatgaactcctagatctgagatcccatctcactcccttacaactgatca 24143321  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagctt 284  Q
    |||||| ||| || |||||||  |||| |||||  |||||||| ||||||||||||| |||||| || ||||||||||| |||||    
T  24143322 cagcccctgtaatactcaaataacaaatacaatcaaaatgaagctaccttcaaacaacacaactgaacaccgtacttcacagctt 24143406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 19894967 - 19894693
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||| |||||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  19894967 taacctagttcggtgcaacgtcacatactctaggagctaccaagccaggaacgaaatccactagtgtagttcgtattcaatagctctcagcaaactcctc 19894868  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||| ||||||||||||||||||||||||        |||||||||||||||  |||||||| || ||||||| ||||||||||||||       ||||    
T  19894867 gtttgaactaatgacctaggacctacccgt--------actgacttcaacctagaaactcctaaatctgagatcccatctcactccctt-------atca 19894783  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    || ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  19894782 caacccctgtgattctcaaattacaaacacaatgaaatgaagttaccttcaaacaaaacaactaaacgccgtacttcacagcttaggtgc 19894693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 22554965 - 22555249
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  22554965 taacccagttcggtgcaacgtcacctactctgaaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctc 22555064  T
Q  101 gtttgcacta-at-gacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgat 198  Q
    || ||||||| || |||||||||||||         ||||||||||||||||||| |||||| ||||| ||||||| |||||||||||||| ||||||||    
T  22555065 gtatgcactatatggacctaggaccta--------tccgtactgacttcaacctaggaactcgtagatctgagatcccatctcactcccttgcaactgat 22555156  T
Q  199 cacagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaac-aaaacaactaaataccgtacttcagagcttaggtg 289  Q
    || ||||| |||||| |||||||  |||| |||||  ||||||||||| |||||||| |||||||||  | ||||||||||| ||||| ||||    
T  22555157 catagcccctgtgatactcaaataacaaatacaatcaaaatgaagttatcttcaaacaaaaacaactggacaccgtacttcacagctttggtg 22555249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 13 - 284
Target Start/End: Complemental strand, 11325297 - 11325031
Alignment:
Q  13 gtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-a 111  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| |    
T  11325297 gtgcaacgtcacctgctctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttgcactata 11325198  T
Q  112 tgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtg 211  Q
    |||||||||||||||        ||||||| ||||||||||| |||||| ||||| | ||||  ||||||||||||||||||||||||||||||| ||||    
T  11325197 tgacctaggacctac--------ccgtactaacttcaacctaggaactcgtagatctaagattccatctcactcccttacaactgatcacagcccctgtg 11325106  T
Q  212 attctcaaattgcaaacacaat-gaaatgaagttaccttcaaac-aaaacaactaaataccgtacttcagagctt 284  Q
    || |||||||  |||| |||||  |||||||||||||||||||| |||||||||  | ||||||||||| |||||    
T  11325105 atactcaaataacaaatacaatcaaaatgaagttaccttcaaacaaaaacaactggacaccgtacttcacagctt 11325031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 46741913 - 46741783
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  46741913 taacccatttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccactagtgtaatccttattcaatagctctcagcaaactcctc 46741814  T
Q  101 gtttgcactaatgacctaggacctacccgta 131  Q
    ||||||||| |||||||||||||||||||||    
T  46741813 gtttgcacttatgacctaggacctacccgta 46741783  T

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Target: chr4; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 21478103 - 21478279
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||    
T  21478103 taacccagttcggtgcaacgtcacctactctggaggctaccaagccaggaaggaaatacactagtgtagtccttattcaaaagctctcagcaaactcctc 21478202  T
Q  101 gtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||| ||| | |||||||||||||||||||| ||        |||||||||||| |||||||||||| ||||||| |||||||||    
T  21478203 gtttacactttatgacctaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagatcccatctcact 21478279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 11905090 - 11905299
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||||||||| ||||| |||||||||||||| || ||||| |||    
T  11905090 taacccagttcggtgcaacgtcacctactttggggt-taccaagtcaggaaggaaatccactagtgcagtccttattcaatagctctcagtaaacttctc 11905188  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||| |||||| |||||| ||| |||        | ||| ||||||||||||| |||||||||||| | ||||| ||||| |||||| ||||| | ||||    
T  11905189 gtttacactaaagacctatgacttac--------ctgtattgacttcaacctaggaactcctagatcttagatcccatctaactccc-tacaaataatca 11905279  T
Q  201 cagcccgtgtgattctcaaa 220  Q
    |||||| |||||||||||||    
T  11905280 cagcccatgtgattctcaaa 11905299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 25116840 - 25116997
Alignment:
Q  22 cacctactctgggggctac--caagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgaccta 118  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||| ||||||||    
T  25116840 cacctactctgggggctacaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaacttctcgtttacactatatgaccta 25116939  T
Q  119 ggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  25116940 ggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 25116997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 16383907 - 16384017
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| ||||||||||    
T  16383907 cacctactctgggggcttccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgacctagg 16384006  T
Q  121 acctacccgta 131  Q
    |||||||||||    
T  16384007 acctacccgta 16384017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 34 - 184
Target Start/End: Complemental strand, 23400325 - 23400182
Alignment:
Q  34 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtac 132  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||     
T  23400325 gggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgta- 23400227  T
Q  133 tgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
         ||  |||||||||||| |||||||||||| ||| ||| |||||||||    
T  23400226 -----ta--gacttcaacctaggaactcctagatctgatatcccatctcact 23400182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 290
Target Start/End: Complemental strand, 46739278 - 46739146
Alignment:
Q  153 atgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaa 252  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||     |||||||||||||| |||| ||||| ||||||||||||||||||    
T  46739278 atgaactcctagatctgagatctcatctcactcccttaaaactgatcacag-----gtgattctcaaattacaaatacaataaaatgaagttaccttcaa 46739184  T
Q  253 acaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    |||||||||||||| ||| ||||||| | |||||||||    
T  46739183 acaaaacaactaaacaccatacttcacaacttaggtgc 46739146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 9068962 - 9069116
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||| |||||| || ||||||    
T  9068962 cacctactctggaggctaccaagcgaggaaggaaatccactagtgtagtccttattctattgctctcagcaaactcctcgtttacactaaagatctagga 9069061  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||        ||||| ||| ||||| ||| |||||||||||| |||||||||||||||||    
T  9069062 cctac--------ccgtattgatttcaatctaggaactcctagatctgagatctcatctcact 9069116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 33899131 - 33898976
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||| |||||||||||| ||||||| ||||||||| |||||||||  |||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  33899131 cacctactctaggggctaccaagtcaggaagaaaatccactggtgtagtcctcattcaatagctcttagcaaacttctcgtttacactatatgacctagg 33899032  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||| | |||||||||||||||||    
T  33899031 acctacccgta------ta--gacttcaacctaggaactcctaggtttgagatctcatctcact 33898976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 18618258 - 18618150
Alignment:
Q  23 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||| ||||| |||||||||||    
T  18618258 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaactcctcgtttacactatatgacctagga 18618159  T
Q  122 cctacccgt 130  Q
    | |||||||    
T  18618158 catacccgt 18618150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 28019327 - 28019431
Alignment:
Q  28 ctctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctac 126  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||| |||    
T  28019327 ctctgggggctaccaagccaagaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacatac 28019426  T
Q  127 ccgta 131  Q
    |||||    
T  28019427 ccgta 28019431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 15700454 - 15700347
Alignment:
Q  22 cacctactct-gggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagg 120  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| |||||| ||||||||    
T  15700454 cacctactcttgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctttcagcaaactcctcgtttacactaaagacctagg 15700355  T
Q  121 acctaccc 128  Q
    ||||||||    
T  15700354 acctaccc 15700347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 10190903 - 10191013
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| ||||| ||||| ||||    
T  10190903 cacctactctgggggctaccaagccaggaaggaaatccaccagtgtagtccttattcaatagctctaagcaaactcctcgtttacactatatgacatagg 10191002  T
Q  121 acctacccgta 131  Q
    || ||| ||||    
T  10191003 acttactcgta 10191013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 10721979 - 10722154
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    |||||||||||||  |||| |||||||| ||| |||| |||||| |||||||||||||| ||||||||||||| ||||| | |||||| | |||||||||    
T  10721979 taacccagttcggcacaac-tcacctacatctaggggttaccaatccaggaaggaaatctactagtgtagtccttattctaaagctctcaacaaactcct 10722077  T
Q  100 cgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| |||| | |||||||||||||||||||      ||  |||||||||||| |||||||||||| |||||||||||||||||    
T  10722078 cgtttacacttaagacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatctcatctcact 10722154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 10935748 - 10935923
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    |||||||||||||  |||| |||||||| ||| |||| |||||| |||||||||||||| ||||||||||||| ||||| | |||||| | |||||||||    
T  10935748 taacccagttcggcacaac-tcacctacatctaggggttaccaatccaggaaggaaatctactagtgtagtccttattctaaagctctcaacaaactcct 10935846  T
Q  100 cgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| |||| | |||||||||||||||||||      ||  |||||||||||| |||||||||||| |||||||||||||||||    
T  10935847 cgtttacacttaagacctaggacctacccgta------ta--gacttcaacctaggaactcctagatctgagatctcatctcact 10935923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 10724276 - 10724430
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||| ||| || ||| ||||||  |    
T  10724276 cacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattctatagctctcagcaaactcctcatttacattaaagacctaaaa 10724375  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  10724376 cctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 10724430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 10938045 - 10938199
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||| ||| || ||| ||||||  |    
T  10938045 cacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattctatagctctcagcaaactcctcatttacattaaagacctaaaa 10938144  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  10938145 cctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 10938199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 13399446 - 13399338
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| | |||||| |||||||||||||||| |||| | ||| |||||    
T  13399446 cacctactctaggggctaccaagccaggaagaaaatccactagtgtagtccttattctaaagctctcagcaaactcctcgtttacacttaagacttagga 13399347  T
Q  122 cctacccgt 130  Q
    |||||||||    
T  13399346 cctacccgt 13399338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 8163777 - 8163956
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggcta-----ccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 95  Q
    |||||||||||||||||||||||||||||||  ||||||     |||||||||||||||||| |||||||| ||||| ||||||| |||||  |||||||    
T  8163777 taacccagttcggtgcaacgtcacctactct-agggctaccaagccaagccaggaaggaaattcactagtgcagtccttattcaaaagctcccagcaaac 8163875  T
Q  96 tcctcgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||| |  | |||||||||||||||||||| ||        |||||||||||| |||||||||||| ||||||| |||||||||    
T  8163876 tcctcgtttacctttatgacctaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagatcccatctcact 8163956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 19659463 - 19659610
Alignment:
Q  30 ctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctaccc 128  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||  ||||||||||||||||      
T  19659463 ctgggggccaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctacat 19659562  T
Q  129 gtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||       ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  19659563 gtt------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 19659610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 33745980 - 33746089
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||  |||||||| || ||| ||||||||| |||||| |||||||||    
T  33745980 cacctactatggaggctaccaagctaggaaggaaatccactagtgtagtccttattttatagctctcagtaaattcctcgtttacactaaagacctagga 33746079  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  33746080 cctacccgta 33746089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 15162630 - 15162521
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||| ||||| ||| |||| | ||||||| |||||| |||||| |||| || |    
T  15162630 cacctactctgggggctgccaacccaagaaggaaatccactagtgtagtccttattctataactctcaacaaactcttcgtttacactaaagaccgagaa 15162531  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  15162530 cctacccgta 15162521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 19183809 - 19183722
Alignment:
Q  36 gctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacc 123  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||| | |||||| || |||| |||||| |||||||||||    
T  19183809 gctaccaagccaggaaggaaatccactagtgtattctgtattctatagctctcaacaaacttcttgtttacactaaagacctaggacc 19183722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 184
Target Start/End: Complemental strand, 10198381 - 10198239
Alignment:
Q  34 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgtac 132  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| | || ||| ||||||||||  |||| | |||   |||||||||||||||||| |    
T  10198381 gggctaccaagccaggaaggaaatccaccagtgtagtccttattcta-agttctcagcaaactccaagtttacaactctagacctaggacctacccgt-c 10198284  T
Q  133 tgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |       ||||||||||||| |||||||||||| |||||||||||||||||    
T  10198283 t-------tgacttcaacctaggaactcctagatctgagatctcatctcact 10198239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33737978 - 33738053
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 75  Q
    ||||||||||||||| |||   |||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  33737978 taacccagttcggtgacaaacacacctactatggaggctaccaagccaggaaggaaatccactagtgtagtccgta 33738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 32861664 - 32861746
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 104  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||| ||||| | || ||| | ||||||||||||||    
T  32861664 cacctactctaggggctaccaagtcaggaagaaaatccactagtgtagtccttattctaaagttctcaacaaactcctcgttt 32861746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 50907868 - 50907977
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 120  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||| | || | | |||||||||||||||| | |||   ||||||||    
T  50907868 cacctactctgagggctaccaagtcaggaagaaaatccactagtgtagtccttattcta-agttatcagcaaactcctcgtttacaactctagacctagg 50907966  T
Q  121 acctacccgta 131  Q
    |||||||||||    
T  50907967 acctacccgta 50907977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 13268843 - 13268904
Alignment:
Q  3 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  13268843 acccagttcggtgcaacttcacctacatctgggggctaccaagtcaggaaggaaatccacta 13268904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11865278 - 11865215
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||||||| |||| |||||    
T  11865278 taacccagttcggtgcaacgtcttctacgtctgggggctaccaagccaggaagaaaattcacta 11865215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 41785461 - 41785524
Alignment:
Q  32 gggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 95  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| | || ||| |||||||    
T  41785461 gggggctaccaagccaagaaggaaatccactagtgtagtccctattctaaagttctcagcaaac 41785524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 16655481 - 16655405
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| ||||||| ||||| | || ||| |||||||||||    
T  16655481 cacctactctaggggctaacaagccaagaaggaaatccactagggtagtccttattcta-agttctcagcaaactcct 16655405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 17871665 - 17871604
Alignment:
Q  3 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||||||||||| |||||||| |||| ||||||||||| |||||||||||| |||||    
T  17871665 acccagttcggtgcaacttcacctacatctgagggctaccaagtcaggaaggaaattcacta 17871604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 2679866 - 2680013
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||||||| ||||||  ||||||||||||||||| |||||||| | ||| | || ||| ||||||||||  ||||  ||| || || |||||    
T  2679866 cacctactctgggggcaaccaagttaggaaggaaatccactattgtagtccttgttcta-agttctcagcaaactccaagttt--act-atcacatagga 2679961  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctc 181  Q
    |||||         |||||||||||||||||| || ||||||||| ||||||||||||||    
T  2679962 cctac--------tcgtactgacttcaacctaggagctcctagatctgagatctcatctc 2680013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24608701 - 24608764
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||  | |||||||| |||||    
T  24608701 taacccagttcggtgcaacgtcacctacgtctggggactaccaagcttgaaaggaaattcacta 24608764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11289501 - 11289438
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactag 64  Q
    ||||||||||||||||||||||||| || ||| |||| || |||||||||||| |||| ||||||    
T  11289501 taacccagttcggtgcaacgtcaccaacgtct-ggggttaacaagccaggaagaaaattcactag 11289438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 6e-90; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 16137745 - 16137462
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  16137745 taacccagtttgatgcaacgtcacctactctgagggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctc 16137646  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||| ||||||||||||| ||||||||        ||||||||||||||| |||||| || || ||||||| |||||||||||||||||||| ||||    
T  16137645 gtttgcagtaatgacctaggatctacccgt--------actgacttcaacctaggaactcataaatctgagatcacatctcactcccttacaacttatca 16137554  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaa--acaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    || ||| | ||||||||||||| |||||||||| ||||||||||||||||||  |||||||||||||| ||||||||| | |||||||||||    
T  16137553 caacccctatgattctcaaattacaaacacaataaaatgaagttaccttcaaacacaaaacaactaaacaccgtactttacagcttaggtgc 16137462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 19215949 - 19216231
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19215949 taacccagttcggtgcaacgtcacctactctaggga-taccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctc 19216047  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||| ||||| ||||||||||||||||        ||||||| |||||||| || |||||||||||| ||||||| ||||||||||||||||||||||||    
T  19216048 gttttcactatatgacctaggacctac--------ccgtactaacttcaacttaggaactcctagatttgagatcccatctcactcccttacaactgatc 19216139  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    ||||||| |||||| ||||||| | ||| |||||  |||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  19216140 acagcccttgtgatactcaaatagaaaatacaatcaaaatgaagttaccttcaaacaaaacaactaaacaccatacttcacagcttaggtgc 19216231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 15038343 - 15038624
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  15038343 taacccagtttggtgcaacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccgtattcaatagctctcaggaaactcctc 15038442  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||||||| |||||||||||||| ||        |||||||||||||||||||  ||||||||||| ||||||| ||||||||||| |||||||||||||    
T  15038443 gtttgcacaaatgacctaggaccaac--------ccgtactgacttcaacctagtaactcctagatctgagatcccatctcactccattacaactgatca 15038534  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
     ||||| | |||| |||||| | |||| |||||  |||||||||||||||||||||| |||||| |||||||||||||| ||||| |||||    
T  15038535 tagcccctatgatactcaaa-tacaaatacaatcaaaatgaagttaccttcaaacaatacaactgaataccgtacttcacagctttggtgc 15038624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 15003326 - 15003055
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||| |||||||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||     
T  15003326 taacccagttcggtgcaatgtcacctactctggtggataccaagccatgaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctt 15003227  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||||||||| ||||||||||||||||        |||||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||    
T  15003226 gtttgcactatatgacctaggacctac--------ccgtactgacttcaacataggaactcctagatttgagatctcatctcactcccttacaaatgatc 15003135  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaaca-aaacaactaaataccgtacttca 278  Q
    || |||  | ||||||| || || || ||||||| |||| |||||||||||||||| ||||||||||  ||||| |||||    
T  15003134 actgcctctatgattctgaatttacagacacaatcaaataaagttaccttcaaacacaaacaactaatcaccgtgcttca 15003055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 9384609 - 9384879
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||| ||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  9384609 taacccagttcggtacaacgtcgcctattctggtggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctc 9384708  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||||||||| ||||||||||||||||        ||||||||||||||||||| ||||| || ||| ||||||| ||||||||||||| |||| |||||    
T  9384709 gtttgcactatatgacctaggacctac--------ccgtactgacttcaacctaggaact-cttgatctgagatcccatctcactccctaacaaatgatc 9384799  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttacctt-caaacaaaacaactaaataccgtacttca 278  Q
    ||| ||| ||||||||||||  | |||||||||| |||||||||||||||  ||| |||||||||||| ||||| |||||    
T  9384800 acaacccctgtgattctcaatatacaaacacaatcaaatgaagttaccttaaaaaaaaaacaactaaacaccgtgcttca 9384879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 12444883 - 12444604
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||||||||||| ||||  |||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |||||| |||||||  |     
T  12444883 taacccagttcggtgacaaca-cacctactctggaggctaccaagctaggaaggaactccactagtgtagtccgtattcaaaagctctcagcaaac--ca 12444787  T
Q  100 cgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||| |||||||||||| ||||||| || |||||||||||||||||||||    
T  12444786 cgtttgcactaatgacctaggacctacccgtactg--------acttcaacctaggaactcctagatttgagatcccacctcactcccttacaactgatc 12444695  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagcttaggtg 289  Q
    ||| ||| |||||| |||||||  |||| |||||  ||||||| |||||||||||||| |||||| || ||||||||||| ||||| ||||    
T  12444694 acaacccctgtgatactcaaataacaaatacaatcaaaatgaatttaccttcaaacaacacaactgaacaccgtacttcacagctttggtg 12444604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 20003133 - 20003346
Alignment:
Q  2 aacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcg 101  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| | |||||||||||||| || |||| |||||    
T  20003133 aacccagttcggtgcaacgtcacctactttaggggctaccaagccaggaaggaaatcaactagtgtagttcttattcaatagctctcaggaaacccctcg 20003232  T
Q  102 tttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||| ||||||||||||||||        ||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  20003233 tttgcactatatgacctaggacctac--------ccgtacttacttcaacctaggaactcctagatttgagatcccatctcactcccttacaactgatca 20003324  T
Q  201 cagcccgtgtgattctcaaatt 222  Q
    || ||  |||||||||||||||    
T  20003325 catcctctgtgattctcaaatt 20003346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 16309520 - 16309342
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||  ||||||| ||||||||||||    
T  16309520 taacccagttcagtgcaacgtcacctactctgggggctaccaagccagga-ggaaatccactagtatagtccttattctctagctctcagcaaactcctc 16309422  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactccct 188  Q
    |||| |||||| |||||||||||||||||| ||       ||||||||||||| |||||| ||||| |||||||||||||||||||||    
T  16309421 gtttacactaaagacctaggacctacccgt-ct-------tgacttcaacctaggaactcgtagatctgagatctcatctcactccct 16309342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 20558297 - 20558473
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||| | | |||| ||||||||||||    
T  20558297 taacccagttcggtgcaacgtcacctagtctggaggctaccaagccaggaaggaaatccactagtgtagcccttattctaaaactctcagcaaactcctc 20558396  T
Q  101 gtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||| ||| | |||||||||||||||||||| ||        |||||||||||| ||||||||||||||||||||||||||||||    
T  20558397 gtttacactttatgacctaggacctacccgt-ct-------agacttcaacctaagaactcctagatatgagatctcatctcact 20558473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 17855211 - 17855366
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  17855211 cacctactctggaggctatcaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 17855310  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||||| |||||||||||||||||    
T  17855311 acctacccgta------ta--gacttcaacctaggaactcctagatctgagatctcatctcact 17855366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 20470345 - 20470191
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||| |||||| |||||||||    
T  20470345 cacctactctggaggctaccaagccaggaaggaaatccactagtgtactccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 20470246  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||      ||  |||||||||||| |||||||||||| |||||||||||||||||    
T  20470245 cctacccgta------ta--gacttcaacctaggaactcctagatctgagatctcatctcact 20470191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 9281851 - 9281696
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||| |    
T  9281851 cacctactctgggggctaccaagcctggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaag 9281752  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  9281751 acctacccgta------ta--gacttcaacctaggaactcctagatttgagatcccatctcact 9281696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 33665810 - 33665965
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||| ||||    
T  33665810 cacctactctgggggctactaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacatagg 33665909  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||| | |||||||||||| |||||||||||||||||    
T  33665910 acctacccgta------ta--gacttcaaccaaggaactcctagatctgagatctcatctcact 33665965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 15007499 - 15007370
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||| ||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  15007499 taacccagttcgatgcaaagtcacctactctgggga-taccaagccatgaaggaaatccactagtgtagtacttattcaatagctctcagcaaactcctc 15007401  T
Q  101 gtttgcacta-atgacctaggacctacccgt 130  Q
    |||||||||| ||||||||||||||||||||    
T  15007400 gtttgcactatatgacctaggacctacccgt 15007370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 13195340 - 13195495
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||| ||||||||||    
T  13195340 cacctactctaggggctaccaagccatgaaggaaatccactagtgtagtccttattcaatagctctcagaaaactcctcgtttacactatatgacctagg 13195439  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  13195440 acctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 13195495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 25805470 - 25805624
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||||||| |||||| |||||||||    
T  25805470 cacctactctagaggctaccaagccaggaaggaaatccactagtgtagtccttattatatagctctcagcaaactcctcgtttacactaaagacctagga 25805569  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||        ||||| ||| ||||||||| |||||||||||| ||||||| |||||||||    
T  25805570 cctac--------ccgtattgatttcaacctaggaactcctagatctgagatcccatctcact 25805624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 15897816 - 15897710
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| || ||| |||||||||    
T  15897816 cacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattctatagctcttagcaaactcctcatttacaataacgacctagga 15897717  T
Q  122 cctaccc 128  Q
    |||||||    
T  15897716 cctaccc 15897710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 34657315 - 34657184
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    |||||||||||||  |||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  34657315 taacccagttcggcacaac-tcacctacatctaggggctaccaagccaagaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcct 34657217  T
Q  100 cgtttgcacta-atgacctaggacctacccgta 131  Q
    ||||| ||||| ||||||||||||| |||||||    
T  34657216 cgtttacactatatgacctaggaccaacccgta 34657184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 24501819 - 24501950
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||||||||||| |||   |||||||||| | |||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  24501819 taacccagttcggtgacaaacacacctactctagaggctaccaagccagaaaggaaatccactagtgtagtccttattctatagctctcagcaaactcct 24501918  T
Q  100 cgtttgcactaatgacctaggacctacccgta 131  Q
    | ||| |||||| |||||||||||||||||||    
T  24501919 catttacactaaagacctaggacctacccgta 24501950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 21723543 - 21723442
Alignment:
Q  29 tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacc 127  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  21723543 tctgggggct-ccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacc 21723445  T
Q  128 cgt 130  Q
    |||    
T  21723444 cgt 21723442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 34 - 184
Target Start/End: Complemental strand, 29255046 - 29254904
Alignment:
Q  34 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtact 133  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||| |||||| |||||||||||||||          
T  29255046 gggctatcaagccaggaagaaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagacctaggacctacc------ 29254953  T
Q  134 gccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
      |||| ||| |||||| ||||||||||||||| ||||||| |||||||||    
T  29254952 --cgtattgatttcaacttatgaactcctagatctgagatcccatctcact 29254904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 17864567 - 17864413
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||| |||||| |  ||||||    
T  17864567 cacctactctgggggttaccaatccaggaagaaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagtactagga 17864468  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||| |||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  17864467 cctacctgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 17864413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 32449271 - 32449379
Alignment:
Q  26 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggaccta 125  Q
    |||||| ||||||||||| |||||||||||||||| ||||||| ||| |||| ||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  32449271 tactctaggggctaccaaaccaggaaggaaatccattagtgtattccttatttaatagttctcagcaaactcctcgtttgcactaatgtcctaggaccta 32449370  T
Q  126 cccgtactg 134  Q
    |||||||||    
T  32449371 cccgtactg 32449379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 23882836 - 23882652
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||| |||||||  ||||||||| | |||| |||||| |||||||||    
T  23882836 cacctactctgggggctaccaaatcaggaaggaaatccactagtgtagtctttattctatagctcccagcaaactctttgtttacactaaagacctagga 23882737  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgatt 214  Q
    |||||        | ||| ||| |||||||||||||||||||||| ||| |||||||||||||  ||||||    |||||||||| |||||||    
T  23882736 cctac--------ctgtattgatttcaacctatgaactcctagatctgatatctcatctcactatcttacagtcaatcacagcccctgtgatt 23882652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 14258927 - 14259082
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | ||||||  |||||| || || ||||||||||    
T  14258927 cacctactttgggggctaccaagcgaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaacttatcgtttacaatatatgacctagg 14259026  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||| || ||||||||||||||| ||||||| |||||||||    
T  14259027 acctacccgta------ta--gacttccacttatgaactcctagatctgagatcccatctcact 14259082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 20989907 - 20989802
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| || ||| |||||| ||    
T  20989907 cacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacattaaagacctatga 20989808  T
Q  122 cctacc 127  Q
    ||||||    
T  20989807 cctacc 20989802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 28623524 - 28623699
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    |||||||||||||  |||| |||||||| ||| |||||||||||||||||||||||||  ||||||||||||| ||||| | |||||| |||||| || |    
T  28623524 taacccagttcggcacaac-tcacctacatctaggggctaccaagccaggaaggaaataaactagtgtagtccttattctaaagctctgagcaaaatctt 28623622  T
Q  100 cgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| |||| | ||||||||||||||        ||||| ||| ||||||||| |||||||||||| |||||||||||||||||    
T  28623623 cgtttacacttaagacctaggacctac--------ccgtattgatttcaacctaggaactcctagatttgagatctcatctcact 28623699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 184
Target Start/End: Original strand, 25964722 - 25964866
Alignment:
Q  33 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 131  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| ||||| |||||||||||||||||||||    
T  25964722 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25964821  T
Q  132 ctgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
          ||  |||||||||||| |||||||||||| ||||||| ||| |||||    
T  25964822 ------ta--gacttcaacctaggaactcctagatctgagatcccatatcact 25964866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 184
Target Start/End: Original strand, 25969369 - 25969513
Alignment:
Q  33 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 131  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| ||||| |||||||||||||||||||||    
T  25969369 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25969468  T
Q  132 ctgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
          ||  |||||||||||| |||||||||||| ||||||| ||| |||||    
T  25969469 ------ta--gacttcaacctaggaactcctagatctgagatcccatatcact 25969513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 184
Target Start/End: Original strand, 25973809 - 25973953
Alignment:
Q  33 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 131  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| ||||| |||||||||||||||||||||    
T  25973809 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25973908  T
Q  132 ctgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
          ||  |||||||||||| |||||||||||| ||||||| ||| |||||    
T  25973909 ------ta--gacttcaacctaggaactcctagatctgagatcccatatcact 25973953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 12039824 - 12039715
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||| ||||||||||||||| ||||||||||||  |||||||||||| ||||| |||||||| | |||||||||||||| |||||| |||||||||    
T  12039824 cacctactttgggggctaccaagctaggaaggaaatcttctagtgtagtccttattctatagctctcaacaaactcctcgtttacactaaagacctagga 12039725  T
Q  122 cctacccgta 131  Q
    ||||| ||||    
T  12039724 cctactcgta 12039715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 17234608 - 17234759
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||| ||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||  |||||||||  |||| ||||| |||||||| |    
T  17234608 cacctactctaggggctaccaagcccagaaggaaatccaccagtgtagtccttattcaatagctctctgcaaactccctgtttacactatatgacctatg 17234707  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatct 180  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||| |||||||||    
T  17234708 acctacccgta------ta--gacttcaacctaggaactcctagatctgatatctcatct 17234759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 21706467 - 21706383
Alignment:
Q  47 aggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgt 130  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  21706467 aggaagaaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgt 21706383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 26965713 - 26965488
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 120  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||||||||| ||||| | || ||| |||||||||||| ||| | ||| | ||||||||    
T  26965713 cacctactctggaggctatcaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaactcctcatttacaacttaagacctagg 26965614  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaa 220  Q
    |||||||||| ||        |||||||||||| |||||||||||| ||||||| |||||||||  | |||||   |||||| ||| ||||||| |||||    
T  26965613 acctacccgt-ct-------agacttcaacctaggaactcctagatctgagatcccatctcactatcctacaatcaatcacaacccctgtgattatcaaa 26965522  T
Q  221 ttgcaaacacaatgaaatgaagttaccttcaaaca 255  Q
    ||  ||||||||    ||||||| |||||||||||    
T  26965521 tt-taaacacaaaatgatgaagtgaccttcaaaca 26965488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 17528027 - 17527920
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||| | |||||||||||||||| |||  |||||||||||||||||| |||||||||| ||| ||||||||||| |||| ||||| ||||||||||    
T  17528027 cacctactattggggctaccaagccagaaagttaatccactagtgtagtccttattcaatagttctcagcaaactccttgtttacactatatgacctagg 17527928  T
Q  121 acctaccc 128  Q
    ||||||||    
T  17527927 acctaccc 17527920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 13870493 - 13870399
Alignment:
Q  37 ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgt 130  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||| | |||| ||||| |||||| |||||||||||||    
T  13870493 ctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcatcaagctcattgtttacactatatgaccgaggacctacccgt 13870399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 19171452 - 19171587
Alignment:
Q  42 aagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtac 140  Q
    |||| |||||||||||||||||||||||||| ||||||||| |||| |||||| |||| | ||  |||| |||||||||||||||||||||      ||     
T  19171452 aagctaggaaggaaatccactagtgtagtccttattcaataactctcagcaaagtccttgcttatactatatgacctaggacctacccgta------ta- 19171544  T
Q  141 tgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
     ||||||||||||||||||||||||| ||||||  |||||||||    
T  19171545 -gacttcaacctatgaactcctagatctgagattccatctcact 19171587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 278
Target Start/End: Original strand, 32452131 - 32452252
Alignment:
Q  156 aactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttacc-ttcaaac 254  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||||  || | ||||||||| ||| || ||||||| ||||||||||||| || ||||    
T  32452131 aactcctagatctgagatcccatctcactcccttacaaatgatcaca--ccctatgattctcagattacagacacaatcaaatgaagttacctttaaaac 32452228  T
Q  255 aaaacaactaaataccgtacttca 278  Q
    ||||||||||   |||||||||||    
T  32452229 aaaacaactattcaccgtacttca 32452252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 264
Target Start/End: Complemental strand, 21323311 - 21323181
Alignment:
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatg 234  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||||| || | |||   | |||| ||| ||||||| ||| ||| |||||||||      
T  21323311 ccgtattgacttcaacctaggaactcctagatctgagatctcatctcacttccct-caatgaaccacaacccatgtgattatcagattacaaacacaaca 21323213  T
Q  235 aa--atgaagttaccttcaaacaaaacaacta 264  Q
    ||  ||||||||||||||||||||||||||||    
T  21323212 aaagatgaagttaccttcaaacaaaacaacta 21323181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 205
Target Start/End: Complemental strand, 3567553 - 3567389
Alignment:
Q  33 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtac 132  Q
    ||||||||||||  ||||| | |||||||||||||||| | ||||| | |||||| |||||| ||||||||| |||| | |||||||||||||||         
T  3567553 ggggctaccaagttaggaaagtaatccactagtgtagttcttattctaaagctctcagcaaaatcctcgtttacacttaagacctaggacctacc----- 3567459  T
Q  133 tgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcc 205  Q
       |||| ||| ||||||||| ||||| |||||| | |||||||||||||||  | ||||||  |||||||||    
T  3567458 ---cgtattgatttcaacctaagaacttctagatctaagatctcatctcactatcctacaaccaatcacagcc 3567389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 8465810 - 8465705
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||| ||||||||||||     ||| |||||||||||| || || |||||||| ||||||||||   ||| |||||| |||||||||    
T  8465810 cacctactctgggggctgccaagccaggaat----tccgctagtgtagtccttactctatagctctcagcaaactccaaatttacactaaagacctagga 8465715  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  8465714 cctacccgta 8465705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25782806 - 25782893
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctct 87  Q
    ||||||||||||||| |||   |||||||||||| |||||||||||||| |||||||||||||||||||| |  ||||| ||||||||    
T  25782806 taacccagttcggtgacaaacacacctactctggaggctaccaagccagtaaggaaatccactagtgtagccattattctatagctct 25782893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 20765158 - 20764982
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    ||||||||||||||| |||   ||| |||||||||||| |||||||||||||| || |||||||||||||||| ||||| | || ||| | ||||||       
T  20765158 taacccagttcggtgacaaacacacttactctgggggcgaccaagccaggaagaaagtccactagtgtagtccttattcta-agttctcaacaaactttc 20765060  T
Q  100 cgtttgc-actaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| | |||   |||||||||||||||||| ||       ||||||||||||| |||||| ||||| |||||||||||||||||    
T  20765059 cgtttacaactctagacctaggacctacccgt-ct-------tgacttcaacctaagaactcttagatctgagatctcatctcact 20764982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22885300 - 22885237
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  22885300 taacccagtacggtgcaacgtcacctacatctgggggcatccaagccaggaaggaaatctacta 22885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 18152739 - 18152694
Alignment:
Q  139 actgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  18152739 actgacttcaacctaggaactcctagatctgagatctcatctcact 18152694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 21323407 - 21323360
Alignment:
Q  31 tgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 78  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||    
T  21323407 tgggggctaccaaatcaggaaggaaatccactagtgtagtccttattc 21323360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3904829 - 3904767
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||| ||||||||| |||||| |||||  | |||||||||||||||||||||||||| ||||    
T  3904829 taacctagttcggtgaaacgtcccctacgtttggggctaccaagccaggaaggaaatcaacta 3904767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 18152848 - 18152798
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    |||||||| ||| |||||||||| ||||||||||||||||||| |||||||    
T  18152848 cacctactatggaggctaccaaggcaggaaggaaatccactagcgtagtcc 18152798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 30424952 - 30424998
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgta 68  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||    
T  30424952 cacctactctaggggctaccaagccaagaaggaaatccattagtgta 30424998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 11960511 - 11960608
Alignment:
Q  35 ggctaccaagccaggaaggaaatccactagtgtagtc-cgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgt 130  Q
    ||||||||||||| |||||||||| | ||||||||||   ||||| | || ||| |||||||||||||||| | ||| | ||||||||||||||||||    
T  11960511 ggctaccaagccacgaaggaaatctattagtgtagtcttttattctaaagttctcagcaaactcctcgtttacaactgaagacctaggacctacccgt 11960608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 13553349 - 13553409
Alignment:
Q  4 cccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||| |||||||| |||||||| | |||||||||||| |||||||||||||| |||||    
T  13553349 cccagttgggtgcaacatcacctacgtttgggggctaccatgccaggaaggaaattcacta 13553409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1103473 - 1103411
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    |||||||||||||||||||| ||| ||| ||||||| ||||||||||||||| |||||| ||||    
T  1103473 taacccagttcggtgcaacgccacttacgtctgggg-ctaccaagccaggaaagaaatctacta 1103411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 15004272 - 15004177
Alignment:
Q  195 tgatcacagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttcaaaca-aaacaactaaataccgtacttcagagcttaggtg 289  Q
    |||||||||||  | ||||||| || || || ||||||| ||||||| ||||||||||||| ||||||||||  ||||| ||||| ||||| ||||    
T  15004272 tgatcacagcctctatgattctgaatttacagacacaatcaaatgaatttaccttcaaacacaaacaactaatcaccgtgcttcacagctttggtg 15004177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22903258 - 22903195
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||| |||||||||||||||||| ||||||| |  ||||||||||||| ||||| ||||    
T  22903258 taacccagtgcggtgcaacgtcacctacatctggggacatccaagccaggaagaaaatctacta 22903195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 19894722 - 19894656
Alignment:
Q  63 agtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctaccc 128  Q
    |||||||||| |||||||||||||| | |||| |||| |||| || || ||||||||||||||||||    
T  19894722 agtgtagtccttattcaatagctctcatcaaattccttgtttacattatatgacctaggacctaccc 19894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 28045092 - 28045031
Alignment:
Q  3 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||||||||||  |||||||| | |||||||||||||| ||| || |||||||||||    
T  28045092 acccagttcggtgcaatttcacctacatatgggggctaccaaggcagaaatgaaatccacta 28045031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 8e-86; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 29566008 - 29566288
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||| ||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  29566008 taactcagttcgatgcaacgtcccctactctgggg-ctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctc 29566106  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||| ||||||    
T  29566107 gtttgcactaatgacctaggacctac--------ccgtactgacttcaacctagaaactcctagatctgagatcccatctcactcccttacaaatgatca 29566198  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaaataccgtacttcagagcttaggtg 289  Q
    |||||| ||||||| |||| || || ||||||| |||||||||||||||| |||||||||||||||  ||||| ||||| ||||| ||||    
T  29566199 cagcccctgtgattttcaatttacagacacaatcaaatgaagttaccttcaaaacaaaacaactaacaaccgtgcttcacagctttggtg 29566288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 18765671 - 18765954
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||    
T  18765671 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagtaaactcctc 18765770  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||||||||| |||||||||||| |||        ||||||| ||||||||||| |||||| ||||| ||||||| ||||||| ||| |||||||| |||    
T  18765771 gtttgcactatatgacctaggacttac--------ccgtactaacttcaacctaggaactcgtagatctgagatcccatctcattccattacaactaatc 18765862  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaaataccgtacttcagagcttaggtgc 290  Q
    ||||||| ||||||| ||||||| |||| | ||| |||||||||||||||| |||| ||||||||||| ||||||||||  ||||| |||||    
T  18765863 acagcccatgtgattttcaaattacaaaaataattaaatgaagttaccttcaaaactaaacaactaaacaccgtacttctcagctttggtgc 18765954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 13315130 - 13314872
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 99  Q
    |||||||||||||||||| |||||||||| |||||| |||| ||||||||||| ||||||||||||||||||| ||||||| |||||| |||||||||||    
T  13315130 taacccagttcggtgcaatgtcacctactatggggggctactaagccaggaagaaaatccactagtgtagtccttattcaagagctctcagcaaactcct 13315031  T
Q  100 cgtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||||||||||||||||||||||||||||||        ||||||||||| | | |||||||||||| ||||||| |||||||||||||| ||| |||||    
T  13315030 cgtttgcactaatgacctaggacctacccgt--------actgacttcaatcaaggaactcctagatctgagatcccatctcactcccttccaaatgatc 13314939  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaa 265  Q
    ||||||| |||||||||||  || || ||||||| |||||||||||||||| |||||||||||||||    
T  13314938 acagcccatgtgattctcagtttacagacacaatcaaatgaagttaccttcaaaacaaaacaactaa 13314872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 26860432 - 26860284
Alignment:
Q  29 tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacc 127  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  26860432 tctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacc 26860333  T
Q  128 cgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||      ||  || ||||||||| |||||||||||| |||||||||||||||||    
T  26860332 cgta------ta--gatttcaacctaggaactcctagatctgagatctcatctcact 26860284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 23758645 - 23758797
Alignment:
Q  25 ctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| | |||||||||||||| ||||| |||||||||||||    
T  23758645 ctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagttctcaacaaactcctcgtttacactatatgacctaggacc 23758744  T
Q  124 tacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  23758745 tacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 23758797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 36398937 - 36398782
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctagg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||| | ||||||||||    
T  36398937 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagg 36398838  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||| ||        |||||||||||| |||||||||||| ||||||| |||||||||    
T  36398837 acctacccgt-ct-------agacttcaacctaggaactcctagatctgagatcccatctcact 36398782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 19466665 - 19466556
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||| ||| |||||| |||||||||    
T  19466665 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagaaaactcctcatttacactaaagacctagga 19466566  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  19466565 cctacccgta 19466556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 24790301 - 24790146
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| |||| |||||||||||||||| ||||| ||||||||||    
T  24790301 cacctactctgggggctaccaagtcaggaaggaaatccactagagtagtccttattcaatatctctcagcaaactcctcgtttacactatatgacctagg 24790202  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| ||| |||||    
T  24790201 acctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatatcact 24790146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 12910507 - 12910661
Alignment:
Q  23 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagga 121  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| | ||||||||| |||||| ||||| ||| |||||||    
T  12910507 acctactctgggggctaccaagccaggaaggaaatccacaagtgtagtccttattcaatagctttcagcaaactcgtcgtttacactatatggcctagga 12910606  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  12910607 cctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 12910661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15328304 - 15328412
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| |||||| ||||||||||||    
T  15328304 taacccagttcggtgcaatgttacctactctgggggctaccaagccaagaaggaaatccattagtgtagtccttattcaaaagctctaagcaaactcctc 15328403  T
Q  101 gtttgcact 109  Q
     ||| ||||    
T  15328404 atttacact 15328412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 184
Target Start/End: Original strand, 22610934 - 22611064
Alignment:
Q  47 aggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgccgtactgact 145  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||      ||  ||||    
T  22610934 aggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgta------ta--gact 22611025  T
Q  146 tcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||| |||||||||||| ||||||| |||||||||    
T  22611026 tcaacctaggaactcctagatctgagatcccatctcact 22611064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 21530404 - 21530507
Alignment:
Q  24 cctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacc 123  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||| | ||||| |||||||| |||||| ||||||||| | |||| |||||||||||    
T  21530404 cctactctaggggctaccaagccaagaaggaaatccactagtgtagttcttattctatagctctcagcaaattcctcgtttacgctaaagacctaggacc 21530503  T
Q  124 tacc 127  Q
    ||||    
T  21530504 tacc 21530507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 20649699 - 20649547
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 120  Q
    |||||||||| |||||||| ||| ||||||||||||||||||||||||||| | ||| | || ||||||||||||||  |||| | ||| || |||||||    
T  20649699 cacctactctaggggctacaaagtcaggaaggaaatccactagtgtagtccttgttcta-agttcttagcaaactccaagtttacaacttatcacctagg 20649601  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctca 182  Q
    ||||||        |||||||| |||||||||| |||||||||||| |||||||||||||||    
T  20649600 acctac--------ccgtactggcttcaacctaggaactcctagatttgagatctcatctca 20649547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 25347210 - 25347321
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 120  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| | || ||||||||||||||  |||| | ||| | || |||||    
T  25347210 cacctactctgggggctaccaagccagaaaggaaacccactagtgtagtccttattcta-agttcttagcaaactccaagtttacaacttaagaactagg 25347308  T
Q  121 acctacccgtact 133  Q
    |||||||||||||    
T  25347309 acctacccgtact 25347321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 27111097 - 27111250
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 120  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| | || ||| |||||||| |  |||| | ||| | || |||||    
T  27111097 cacctactctgggg-ctaccaagccaggaaggaagtccactagtgtagtccttattcta-agttctcagcaaacttcaagtttacaacttaagaactagg 27111194  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||        ||||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  27111195 acctac--------ccgtacttacttcaacctaggaactcctagatctgagatctcatctcact 27111250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 21250339 - 21250116
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgca-ctaatgacctagg 120  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||  ||||  | || ||| || ||||  | ||||| || || | ||||||||    
T  21250339 cacctactctgggggctaccaagctaggaaggaaatccgttagtgtagtcgttattttaaagttctcagtaaac--cacgtttacaacttaagacctagg 21250242  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaa 220  Q
    ||||||||||       ||  |||||||||||| || ||||||||| |||||||||||||||||  | |||||   |||||||||| ||||||| ||| |    
T  21250241 acctacccgtc------ta--gacttcaacctaggatctcctagatctgagatctcatctcactatcctacaatcaatcacagcccctgtgattatcata 21250150  T
Q  221 ttgcaaacacaatgaaatgaagttaccttcaaaca 255  Q
    ||  ||||||||   ||||||||||||||||||||    
T  21250149 tt-taaacacaaaataatgaagttaccttcaaaca 21250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 24317945 - 24317871
Alignment:
Q  29 tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 104  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||| | || ||| ||||||||||| ||||    
T  24317945 tctgggggttaccaagccaggaaggaaatccactagtgtagtccttattcta-agttctcagcaaactcctggttt 24317871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31587471 - 31587548
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 78  Q
    ||||||||||||||| |||   |||||||||||| | |||||||||||||||||||||||||||||||||||| |||||    
T  31587471 taacccagttcggtgacaaacacacctactctggag-ctaccaagccaggaaggaaatccactagtgtagtccttattc 31587548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12952467 - 12952539
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    ||||||||||||||| |||   |||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  12952467 taacccagttcggtgacaaacacacctactatggaggctaccaagtcaggaaggaaatccactagtgtagtcc 12952539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31067649 - 31067586
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||| |||| ||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  31067649 taacctagtttggtgcaacgtcacctacgtctgggggctaccaattcaggaaggaaatccacta 31067586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 19198420 - 19198371
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  19198420 cacctactctgggg-ctatcaagccaggaaggaaatccactagtgtagtcc 19198371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 24283671 - 24283621
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  24283671 cacctattctgggggctaccaagtcaggaaggaaatctactagtgtagtcc 24283621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 17395553 - 17395614
Alignment:
Q  3 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    |||||||||||||||||||| ||||  | ||||||||| |||||||||||||||||||||||    
T  17395553 acccagttcggtgcaacgtcgcctaagtgtgggggctatcaagccaggaaggaaatccacta 17395614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 27107632 - 27107681
Alignment:
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  27107632 ccgtactgacttcaacctaggaactcctagatttgagatctcgtctcact 27107681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 25867173 - 25867227
Alignment:
Q  7 agttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatcca 60  Q
    |||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  25867173 agtttggtgcaacgtcacctacatctggaggctaccaggccaggaaggaaatcca 25867227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 17363514 - 17363575
Alignment:
Q  3 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||||||||||| |||||||| |||||||| ||||||| |||||| ||||| |||||    
T  17363514 acccagttcggtgcaacctcacctacatctgggggttaccaagtcaggaatgaaattcacta 17363575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 20378387 - 20378326
Alignment:
Q  3 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    |||| |||||||||||| |||||||| |||||| ||||||||||||||||| |||| |||||    
T  20378387 acccggttcggtgcaacttcacctacatctgggagctaccaagccaggaagaaaatgcacta 20378326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 184
Target Start/End: Complemental strand, 20475409 - 20475264
Alignment:
Q  31 tgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgca-ctaatgacctaggacctacccg 129  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||   |||  ||| ||| ||||||||||  |||| || || || ||||||||||||||||    
T  20475409 tgggggcaaccaagccaggaaagaaattcactagtgtagtcctagttct-tagttctcagcaaactccaagtttacaacttatcacctaggacctacccg 20475311  T
Q  130 tactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    || ||        ||||||||||| || ||||||||| ||||||| |||||||||    
T  20475310 tattg--------acttcaacctaggagctcctagatctgagatcccatctcact 20475264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 24317321 - 24317222
Alignment:
Q  32 gggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgt 130  Q
    |||||||||||||  |  ||||||||||||||||||||||| ||||| | || ||| | |||||||||||||| | |||   ||||||||||||||||||    
T  24317321 gggggctaccaagttataaaggaaatccactagtgtagtccttattcta-agttctcaacaaactcctcgtttacaactctagacctaggacctacccgt 24317223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 45550036 - 45550098
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||| ||||||||||||| |||||||| ||| |||||| |||||||||||| |||||||||||    
T  45550036 taaccaagttcggtgcaacatcacctacatctaggggct-ccaagccaggaacgaaatccacta 45550098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 20476715 - 20476669
Alignment:
Q  26 tactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    |||| ||||||||||||||| ||||||||||| |||| |||||||||    
T  20476715 tactttgggggctaccaagctaggaaggaaattcactggtgtagtcc 20476669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 12952594 - 12952643
Alignment:
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||||||||||| || ||||||||  ||||||| |||||||||    
T  12952594 ccgtactgacttcaacctaggagctcctagacctgagatcccatctcact 12952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 30947335 - 30947392
Alignment:
Q  7 agttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    |||| |||||||| |||||||| ||| |||||||||||| |||||||||||| |||||    
T  30947335 agtttggtgcaacttcacctacatctaggggctaccaagtcaggaaggaaattcacta 30947392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 23801939 - 23801868
Alignment:
Q  32 gggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 104  Q
    |||||||||||||| ||||| |||||||||||  ||||||| ||||| | || ||| | ||||||||||||||    
T  23801939 gggggctaccaagcaaggaatgaaatccactaaagtagtccttattcta-agttctcaccaaactcctcgttt 23801868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 27107556 - 27107639
Alignment:
Q  51 aggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactg 134  Q
    ||||||||||||| |||||||| ||||| | || ||| ||||||||||  |||| || || | ||||||||||||||||||||||    
T  27107556 aggaaatccactattgtagtccttattcta-agttctcagcaaactccaagtttacaacttaagacctaggacctacccgtactg 27107639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28645829 - 28645773
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaa 56  Q
    ||||| ||||| |||||||||||||||| || ||||| ||||||| |||||||||||    
T  28645829 taaccaagttctgtgcaacgtcacctacatccgggggataccaagtcaggaaggaaa 28645773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 5 - 289
Target Start/End: Original strand, 36297 - 36573
Alignment:
Q  5 ccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| |||||||| |||||||    
T  36297 ccagttcggtgcaacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaaaagctctcagcaaacttctcgttt 36396  T
Q  105 gcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagc 204  Q
    ||||||||||||||||||||||        | ||||||||||||||||| |||||||||||| ||||| | |||||||||||||||||| | ||||||||    
T  36397 gcactaatgacctaggacctac--------cggtactgacttcaacctaggaactcctagatctgaga-cccatctcactcccttacaaataatcacagc 36487  T
Q  205 ccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttca-aacaaaacaactaaataccgtacttcagagcttaggtg 289  Q
    || ||||||||||| |||  | ||||||| ||||||||||||||||| ||||||||||||||  ||||| ||||| ||||| ||||    
T  36488 ccctgtgattctcagattatagacacaatcaaatgaagttaccttcagaacaaaacaactaatcaccgtgcttcacagctttggtg 36573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 17136 - 16867
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||||||||| |||||   ||||| |||||||||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  17136 taacccagttcggtgcaacgtcacctactatggggctaaccaatccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctc 17037  T
Q  101 gtttgcacta-atgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatc 199  Q
    |||||||||| ||||||||| ||| ||||||||||        ||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||    
T  17036 gtttgcactatatgacctagtacccacccgtactg--------acttcaacctaggaactcctagatctgagatcccatctcactcccttacaactaatc 16945  T
Q  200 acagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaaataccgtactt 276  Q
    ||||||| ||||||||||||||| | || ||||| |||||||||||||||| ||||||||||| |||| |||||||||    
T  16944 acagcccctgtgattctcaaattacgaatacaatcaaatgaagttaccttcaaaacaaaacaattaaacaccgtactt 16867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 103101 - 103358
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||     
T  103101 taacccagttcagtgcaacgtcacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctgagcaaactcctt 103200  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||||||| || ||||||||||||||        ||||||||||||||||||| |||||||||||| ||||||| | |||||||||||||||| ||||||    
T  103201 gtttgcaccaaagacctaggacctac--------ccgtactgacttcaacctaggaactcctagatctgagatcccttctcactcccttacaaatgatca 103292  T
Q  201 cagcccgtgtgattctcaaattgcaaacacaatgaaatgaagttaccttc-aaacaaaacaactaa 265  Q
    || ||| ||| |||||||  || || ||||||| |||||||||||| ||| |||||||||||||||    
T  103293 caacccctgtaattctcagtttacagacacaatcaaatgaagttacattcaaaacaaaacaactaa 103358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 22 - 284
Target Start/End: Original strand, 3139 - 3392
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||  || ||||||||||||||||||||||    
T  3139 cacctactctggaggctaccaagccaggaaggaaatccactagtgtagtacgtattcaacagctctcagcaaa--ccacgtttgcactaatgacctagga 3236  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaat 221  Q
    |||||        ||||||||| ||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| ||| |||||| |||||||    
T  3237 cctac--------ccgtactgatttcaacctaggaactcctagatttgagatcccatctcactctcttacaactgatcacatcccttgtgatactcaaat 3328  T
Q  222 tgcaaacacaat-gaaatgaagttaccttcaaacaaaacaactaaataccgtacttcagagctt 284  Q
      |||| |||||  |||||||||||||||||||||| |||||  || ||||||||||| |||||    
T  3329 aacaaatacaatcaaaatgaagttaccttcaaacaacacaaccgaacaccgtacttcacagctt 3392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 106; Significance: 6e-53; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 53088 - 52886
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  53088 taacccagttcggtgcaacgtcacctactctgggggctaccaagccagga-ggaaatccactagtgtagtccttattctatagctctcagcaaactcctc 52990  T
Q  101 gtttgcactaatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatca 200  Q
    |||| |||||| ||||||||||||||||||          ||  ||||||||| |||||||||||| ||||||| |||||||||||| ||||||  ||||    
T  52989 gtttacactaaagacctaggacctacccgt---------ttggtttcaacctaggaactcctagatctgagatcccatctcactccc-tacaaccaatca 52900  T
Q  201 cagcccgtgtgatt 214  Q
    | |||| |||||||    
T  52899 ctgcccctgtgatt 52886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 259
Target Start/End: Complemental strand, 45903 - 45778
Alignment:
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaatg 234  Q
    ||||| ||||||||||||| |||||||| ||| ||||||| ||||| |||||| ||||||| || ||||||| ||| ||| ||| |||   |||||||      
T  45903 ccgtattgacttcaacctaagaactccttgatctgagatcccatcttactccc-tacaactaattacagcccttgtcattatcacattatcaacacaaca 45805  T
Q  235 aa--atgaagttaccttcaaacaaaac 259  Q
    ||  ||||||||||||| |||||||||    
T  45804 aaagatgaagttaccttaaaacaaaac 45778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 16377 - 16201
Alignment:
Q  1 taacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctc 100  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| | ||||||||||    
T  16377 taacccagttcggtgcaacgtcaaccactttgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcaacaaactcctc 16278  T
Q  101 gtttgcac-taatgacctaggacctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
     ||| ||| | |||||||||||||||||||| ||        |||||||||||| |||||||||||| |||||||||||||||||    
T  16277 atttacactttatgacctaggacctacccgt-ct-------agacttcaacctaggaactcctagatctgagatctcatctcact 16201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 37022 - 37177
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||| | ||||||||||    
T  37022 cacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacaccatatgacctagg 37121  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  37122 acctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 37177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 25816 - 25661
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||| | |||||||||||||| ||||| ||||||||||    
T  25816 cacctactctgggagctaccaagccaggaaggaaatccactggtgtagtccttattcaatagctctcaacaaactcctcgtttacactagatgacctagg 25717  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  25716 acctacccgta------ta--gacttcaacctacgaactcctagatctgagatcccatctcact 25661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 110395 - 110244
Alignment:
Q  26 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacct 124  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  110395 tactctaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacct 110296  T
Q  125 acccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  110295 acccgta------ta--gacttcaacctaggaactcctagatttgagatcccatctcact 110244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 40351 - 40506
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctagg 120  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||| | ||||||||||    
T  40351 cacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagg 40450  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||| |||      ||  || ||||||||| |||||||||||| ||||||| |||||||||    
T  40451 acctaccagta------ta--gaattcaacctaggaactcctagatctgagatcccatctcact 40506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 17420 - 17266
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||||| |||||| ||||||||  |||||| |||||||||    
T  17420 cacctactctgggggctaccaagtcaggaagaaaatccactagtgtagtccttattctatagctctcagcaaattcctcgttaacactaaagacctagga 17321  T
Q  122 cctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||      ||  ||||||||||||  ||||| ||||| |||||||||||||||||    
T  17320 cctacccgta------ta--gacttcaacctagaaactcttagatctgagatctcatctcact 17266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 36609 - 36715
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| ||||||||||    
T  36609 cacctactctggaggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgacctagg 36708  T
Q  121 acctacc 127  Q
    |||||||    
T  36709 acctacc 36715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 74; Significance: 7e-34; HSPs: 3)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 61612 - 61461
Alignment:
Q  26 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacct 124  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||| ||||||||| | |||| ||||| |||||||| |||||    
T  61612 tactctgggggctaccaagccaagaaggaaatccactagtgtagttcttattcaatagctctcagcaaactcattgtttacactatatgacctaagacct 61513  T
Q  125 acccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  61512 acccgta------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 61461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 50234 - 50130
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | |||| ||||||||| ||||| |||||||| |    
T  50234 cacctactctaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaaatcctcgtttacactatatgacctacg 50135  T
Q  121 accta 125  Q
    |||||    
T  50134 accta 50130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 48373 - 48332
Alignment:
Q  143 acttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||| |||||||||||| | |||||||||||||||    
T  48373 acttcaacctaggaactcctagatctaagatctcatctcact 48332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 73; Significance: 3e-33; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 7678 - 7528
Alignment:
Q  26 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggaccta 125  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| | |||||||||| ||| |||||| |||||||||||||    
T  7678 tactctaggggctaccaagccaggaaggaaattcactagtgtagtccttattctatagctctcaacaaactcctcatttacactaaagacctaggaccta 7579  T
Q  126 cccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||| ||      ||  |||||||||||| |||||||||||| ||||||| |||||||||    
T  7578 cccata------ta--gacttcaacctaggaactcctagatctgagatcccatctcact 7528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 18269 - 18115
Alignment:
Q  22 cacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagg 120  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||| || |||||| || |||||    
T  18269 cacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgattacactaaaga-ctagg 18171  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||| ||||    
T  18170 acctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatcacact 18115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 27663 - 27509
Alignment:
Q  22 cacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagg 120  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||| || |||||| || |||||    
T  27663 cacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgattacactaaaga-ctagg 27565  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    |||||||||||      ||  |||||||||||| |||||||||||| ||||||| |||| ||||    
T  27564 acctacccgta------ta--gacttcaacctaggaactcctagatctgagatcccatcacact 27509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 26421 - 26530
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 121  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||  ||||||| | |||||||||| ||| |||||| |||||||||    
T  26421 cacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattctgtagctctcaacaaactcctcatttacactaaagacctagga 26520  T
Q  122 cctacccgta 131  Q
    ||||||||||    
T  26521 cctacccgta 26530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 87762 - 87861
Alignment:
Q  31 tgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccg 129  Q
    |||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  87762 tgggggct-ccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccg 87860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 2501 - 2351
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 120  Q
    |||||||| | ||||||| ||||||||||||||| |||| ||||||||||| |||||||||||||| |||||||||| ||||| ||||| ||||||||||    
T  2501 cacctactttaggggctatcaagccaggaaggaagtccaatagtgtagtccttattcaatagctctcagcaaactccccgtttacactatatgacctagg 2402  T
Q  121 acctacccgtactgccgtactgacttcaacctatgaactcctagatatgagatctcatc 179  Q
    |||||        ||||||  |||||||||||| |||||||||||| ||||||| ||||    
T  2401 accta--------gccgtatagacttcaacctaggaactcctagatctgagatcccatc 2351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 16767 - 16657
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctagg 120  Q
    ||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||| |||| | |||||||||||| ||| ||| | ||||||||||    
T  16767 cacctactccgggggctaccaagccagaaaggaaatccactactgtagtccttattcaaaagctataagcaaactcctcatttacactttatgacctagg 16668  T
Q  121 acctacccgta 131  Q
    |||||||||||    
T  16667 acctacccgta 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 5674 - 5759
Alignment:
Q  34 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgaccta 118  Q
    |||||||||||| ||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||||| ||||| ||||||||    
T  5674 gggctaccaagcaaggaaggaaatccacaagtgtagtccttattcaatagctctcagcaaactcatcgtttacactatatgaccta 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 37393 - 37536
Alignment:
Q  33 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgta 131  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| | || ||| |||||||||||| ||| | ||| | ||||||||||||||||||     
T  37393 ggggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaactcctcatttacaacttaagacctaggacctacccgt- 37491  T
Q  132 ctgccgtactgacttcaacctatgaactcctagatatgagatctcatctca 182  Q
       |   |||   ||||||||| |||||||||||||||||||| |||||||    
T  37492 ---ctagact---ttcaacctaggaactcctagatatgagatcccatctca 37536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 18547 - 18607
Alignment:
Q  3 acccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||    
T  18547 acccagttcggtgcaacttcacctacttttggggctaccaagccatgaaggaaatccacta 18607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 202416 - 202468
Alignment:
Q  26 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  202416 tactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattc 202468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 202523 - 202612
Alignment:
Q  142 gacttcaacctatgaactcctagatatgagatctcatctcactcccttacaactgatcacagcccgtgtgattctcaaattgcaaacacaa 232  Q
    |||||||||||| ||||| |||||| ||||||| |||||||||  | ||||||  |||||||||| | ||||| ||| ||| |||||||||    
T  202523 gacttcaacctaggaacttctagatctgagatcccatctcactatcctacaaccaatcacagcccctatgattatcagatt-caaacacaa 202612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 2240 - 2182
Alignment:
Q  3 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatcca 60  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  2240 acccagttcggtgcaacttcacctacatctgggggctaccaagccaggaaagaaatcca 2182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 9969 - 10030
Alignment:
Q  3 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||||||||||| | |||||| |||||||||||| |||||||||||||||| |||||    
T  9969 acccagttcggtgcaacctaacctacatctgggggctacaaagccaggaaggaaattcacta 10030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10200 - 10128
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 72  Q
    ||||||||||||||| |||   ||| |||||| |||||||||||| ||| |||||||||||||||||||||||    
T  10200 taacccagttcggtgacaaatacacttactcttggggctaccaagtcagaaaggaaatccactagtgtagtcc 10128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 10067 - 10024
Alignment:
Q  141 tgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||| | |||||||||||| |||||||||||||||||    
T  10067 tgacttcaaccgaggaactcctagatctgagatctcatctcact 10024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 13624 - 13672
Alignment:
Q  22 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 70  Q
    |||||||||| |||||||||||||||||||| |||| || |||||||||    
T  13624 cacctactctaggggctaccaagccaggaagaaaattcattagtgtagt 13672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 13729 - 13778
Alignment:
Q  135 ccgtactgacttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||| ||||||||||||| |||||| ||||  |||||||||||||||||    
T  13729 ccgtattgacttcaacctaggaactcatagacctgagatctcatctcact 13778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8817 - 8754
Alignment:
Q  1 taacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 63  Q
    ||||||||| |||||||||||||||||| ||||||| |  ||||||||||||| ||||| ||||    
T  8817 taacccagtacggtgcaacgtcacctacatctggggacatccaagccaggaagaaaatctacta 8754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5413 - 5491
Alignment:
Q  1 taacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 78  Q
    ||||||||||||||| |||   |||||||||| ||||||   ||| ||| ||||||||||||||||||||||| |||||    
T  5413 taacccagttcggtgacaaacacacctactctaggggctgttaagtcagaaaggaaatccactagtgtagtccttattc 5491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 5548 - 5589
Alignment:
Q  143 acttcaacctatgaactcctagatatgagatctcatctcact 184  Q
    ||||||||||| |||||||||||| ||||||| |||||||||    
T  5548 acttcaacctaggaactcctagatctgagatcccatctcact 5589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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