View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11026_low_1 (Length: 592)

Name: NF11026_low_1
Description: NF11026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11026_low_1
NF11026_low_1
[»] chr5 (19 HSPs)
chr5 (48-580)||(7649736-7650268)
chr5 (253-581)||(14616428-14616756)
chr5 (254-580)||(34405767-34406094)
chr5 (378-580)||(22159663-22159867)
chr5 (257-574)||(33575013-33575331)
chr5 (254-580)||(15532200-15532528)
chr5 (256-580)||(15542384-15542710)
chr5 (350-580)||(26712437-26712669)
chr5 (350-580)||(26982175-26982407)
chr5 (254-341)||(21680634-21680721)
chr5 (254-341)||(33921372-33921459)
chr5 (254-341)||(2499762-2499850)
chr5 (262-335)||(1810198-1810272)
chr5 (381-519)||(11988991-11989133)
chr5 (261-337)||(36330999-36331075)
chr5 (515-580)||(23993320-23993385)
chr5 (254-296)||(9691083-9691125)
chr5 (254-296)||(25185699-25185741)
chr5 (267-318)||(19686465-19686517)
[»] chr1 (25 HSPs)
chr1 (254-580)||(13495906-13496232)
chr1 (254-580)||(13493181-13493508)
chr1 (254-580)||(10764838-10765165)
chr1 (254-580)||(32505857-32506181)
chr1 (254-580)||(39546161-39546486)
chr1 (379-579)||(34066264-34066466)
chr1 (254-574)||(16190179-16190499)
chr1 (378-580)||(27282230-27282434)
chr1 (433-574)||(1936551-1936691)
chr1 (447-580)||(15297251-15297383)
chr1 (466-580)||(22456705-22456818)
chr1 (466-572)||(49147825-49147930)
chr1 (459-580)||(21153174-21153295)
chr1 (254-341)||(34552438-34552525)
chr1 (264-341)||(18392669-18392747)
chr1 (267-334)||(15297492-15297559)
chr1 (146-209)||(48505874-48505937)
chr1 (379-450)||(8435284-8435357)
chr1 (254-341)||(49716647-49716735)
chr1 (278-341)||(49720129-49720192)
chr1 (262-335)||(6206164-6206237)
chr1 (533-580)||(22453415-22453462)
chr1 (527-580)||(23990362-23990415)
chr1 (262-341)||(50196723-50196803)
chr1 (146-186)||(48505811-48505851)
[»] chr7 (21 HSPs)
chr7 (254-580)||(6967066-6967393)
chr7 (254-580)||(24783327-24783654)
chr7 (254-580)||(17866353-17866680)
chr7 (361-580)||(17863202-17863421)
chr7 (254-580)||(36842937-36843264)
chr7 (254-542)||(9765758-9766046)
chr7 (262-574)||(294789-295098)
chr7 (352-589)||(11279401-11279639)
chr7 (420-580)||(46846479-46846639)
chr7 (379-574)||(23313384-23313581)
chr7 (352-580)||(36222406-36222635)
chr7 (379-580)||(3862029-3862225)
chr7 (352-574)||(23759706-23759930)
chr7 (253-369)||(17857879-17857996)
chr7 (352-580)||(33312913-33313143)
chr7 (382-569)||(23107917-23108106)
chr7 (254-341)||(38431669-38431757)
chr7 (262-341)||(3540932-3541011)
chr7 (262-341)||(6964563-6964643)
chr7 (263-337)||(28577687-28577761)
chr7 (310-398)||(46846367-46846455)
[»] chr6 (25 HSPs)
chr6 (254-580)||(14790537-14790864)
chr6 (254-580)||(14795565-14795892)
chr6 (250-580)||(1838393-1838724)
chr6 (255-580)||(19664667-19664991)
chr6 (397-574)||(32704398-32704575)
chr6 (378-580)||(20527285-20527490)
chr6 (254-580)||(15534975-15535300)
chr6 (253-524)||(27649077-27649347)
chr6 (254-519)||(32427281-32427544)
chr6 (381-580)||(16883594-16883795)
chr6 (254-580)||(13017189-13017517)
chr6 (254-580)||(22221642-22221967)
chr6 (254-580)||(22247477-22247802)
chr6 (259-491)||(15540578-15540809)
chr6 (466-580)||(12980705-12980818)
chr6 (364-580)||(30978321-30978539)
chr6 (459-580)||(7769594-7769715)
chr6 (466-579)||(12983592-12983704)
chr6 (381-450)||(11183962-11184033)
chr6 (252-335)||(33678939-33679025)
chr6 (508-558)||(15540529-15540579)
chr6 (254-341)||(11411039-11411127)
chr6 (147-254)||(32090663-32090777)
chr6 (254-341)||(12747086-12747173)
chr6 (267-318)||(34502636-34502688)
[»] chr4 (16 HSPs)
chr4 (262-580)||(647211-647530)
chr4 (262-580)||(650483-650802)
chr4 (254-580)||(26062690-26063020)
chr4 (254-580)||(2541803-2542128)
chr4 (464-580)||(26060506-26060622)
chr4 (254-580)||(12171901-12172218)
chr4 (252-341)||(15851450-15851539)
chr4 (254-341)||(19929155-19929242)
chr4 (269-337)||(21217350-21217418)
chr4 (254-341)||(33400075-33400163)
chr4 (379-441)||(11649329-11649393)
chr4 (129-210)||(52628956-52629036)
chr4 (464-516)||(11649444-11649496)
chr4 (146-202)||(31979285-31979341)
chr4 (53-119)||(31980626-31980692)
chr4 (379-441)||(26060668-26060732)
[»] chr2 (17 HSPs)
chr2 (254-580)||(23673345-23673671)
chr2 (253-580)||(36326845-36327172)
chr2 (252-580)||(16294817-16295145)
chr2 (254-580)||(32575685-32576013)
chr2 (254-580)||(31528307-31528635)
chr2 (352-530)||(40017948-40018126)
chr2 (254-574)||(13709995-13710315)
chr2 (352-580)||(31626468-31626698)
chr2 (254-341)||(24384925-24385014)
chr2 (278-341)||(29436025-29436088)
chr2 (262-329)||(38315809-38315876)
chr2 (146-196)||(40927916-40927966)
chr2 (146-202)||(27409395-27409451)
chr2 (267-318)||(1503204-1503256)
chr2 (267-318)||(1506408-1506460)
chr2 (464-580)||(8427144-8427259)
chr2 (282-330)||(13572070-13572118)
[»] chr3 (21 HSPs)
chr3 (254-580)||(13979405-13979730)
chr3 (254-580)||(39563510-39563837)
chr3 (464-579)||(46731414-46731529)
chr3 (254-580)||(22626312-22626638)
chr3 (165-254)||(35091823-35091912)
chr3 (254-364)||(46731589-46731699)
chr3 (53-163)||(35091672-35091783)
chr3 (254-580)||(11138570-11138896)
chr3 (459-580)||(47412101-47412222)
chr3 (253-341)||(27055149-27055237)
chr3 (254-341)||(19869255-19869343)
chr3 (254-337)||(26822039-26822122)
chr3 (379-450)||(50096829-50096902)
chr3 (487-580)||(35366295-35366387)
chr3 (254-341)||(25492175-25492263)
chr3 (379-439)||(20536459-20536520)
chr3 (254-318)||(3306147-3306213)
chr3 (254-318)||(30157797-30157863)
chr3 (248-297)||(32366877-32366927)
chr3 (256-296)||(4225619-4225659)
chr3 (267-318)||(18883509-18883561)
[»] chr8 (12 HSPs)
chr8 (262-574)||(12575308-12575620)
chr8 (254-519)||(14418445-14418707)
chr8 (379-580)||(41778866-41779068)
chr8 (420-574)||(13096946-13097099)
chr8 (254-341)||(39659712-39659799)
chr8 (254-341)||(9467341-9467429)
chr8 (254-341)||(453863-453951)
chr8 (379-441)||(41836318-41836382)
chr8 (464-516)||(41836433-41836485)
chr8 (459-549)||(44008245-44008335)
chr8 (277-341)||(13332365-13332429)
chr8 (263-297)||(22173710-22173744)
[»] scaffold0363 (1 HSPs)
scaffold0363 (254-519)||(11-273)
[»] scaffold0440 (1 HSPs)
scaffold0440 (352-580)||(9781-10010)
[»] scaffold0352 (1 HSPs)
scaffold0352 (254-580)||(2619-2930)
[»] scaffold0264 (1 HSPs)
scaffold0264 (254-580)||(24185-24510)
[»] scaffold0567 (1 HSPs)
scaffold0567 (442-574)||(5999-6131)
[»] scaffold0068 (1 HSPs)
scaffold0068 (254-341)||(33730-33817)
[»] scaffold0273 (1 HSPs)
scaffold0273 (262-341)||(19517-19596)
[»] scaffold0063 (1 HSPs)
scaffold0063 (493-574)||(7232-7313)
[»] scaffold0500 (1 HSPs)
scaffold0500 (493-551)||(2641-2699)
[»] scaffold0766 (1 HSPs)
scaffold0766 (263-341)||(3664-3739)
[»] scaffold0084 (2 HSPs)
scaffold0084 (254-297)||(19593-19636)
scaffold0084 (254-297)||(29672-29715)
[»] scaffold0126 (1 HSPs)
scaffold0126 (263-297)||(14094-14128)


Alignment Details
Target: chr5 (Bit Score: 440; Significance: 0; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 48 - 580
Target Start/End: Original strand, 7649736 - 7650268
Alignment:
Q  48 gtgagtttcattaaaatctaattttctcacactaatcacaatactcgttaatctcacttaaagattttaagctagttgatcaaattcacacatgtaagaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  7649736 gtgagtttcattaaaatctaattttctcacactaatcacaatacccgttaatcgcacgtaaagattttaagctagttgatcaaattcacacatgtaagaa 7649835  T
Q  148 cacaacaacaaaaagggaaaatcaatcggggtttcaattctcattctattgcatgccaatttctaattgctaattccaatttccttttattataattaga 247  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7649836 cacaacaacaaaaaggaaaaatcaatcggggtttcaattatcattctattgcatgccaatttctaattgctaattccaatttccttttattataattaga 7649935  T
Q  248 acctaatgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnn 347  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||          
T  7649936 acctaatgatagagatttgacaagtgaaccaaaactatcgaagtaataaataaattcgtattcacgaggaccgttgttaatttctactcaacaatttctt 7650035  T
Q  348 natcaaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaata 447  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7650036 tatcaaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttgcttttaagaata 7650135  T
Q  448 ttaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 547  Q
    ||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  7650136 ttagagagaagtatggttaagacatttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgattatctagtttaaagatagat 7650235  T
Q  548 taacaaagtaattatacccaatctctttaccta 580  Q
    |||||| |||||| ||| |||||||||||||||    
T  7650236 taacaaggtaattctactcaatctctttaccta 7650268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 253 - 581
Target Start/End: Original strand, 14616428 - 14616756
Alignment:
Q  253 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||       ||||    
T  14616428 atgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 14616527  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  14616528 aaaaggatgtatgaatttatattgattaccctaggaagttgagttgttttgtaacataaacgtaaataaaacaataaaagttgattttaagaatattaga 14616627  T
Q  453 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 552  Q
    || ||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||    
T  14616628 gagaagtatggttaagacctttgaatcctccgaagttctcctatggtaattttcactcctaattcaatcaatgattatctagtttaacgacagattaaca 14616727  T
Q  553 aagtaattatacccaatctctttacctat 581  Q
    |||||||| ||||||||||||| ||||||    
T  14616728 aagtaattctacccaatctcttgacctat 14616756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 34406094 - 34405767
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||| ||||||||||||||||||||||| ||||       ||||    
T  34406094 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggaccgttgttaatttctactcggcaatttctttatca 34405995  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  34405994 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttgtgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 34405895  T
Q  453 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 552  Q
    || ||||||| ||||||||||  ||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  34405894 gagaagtatggttaagaccttcaaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaaca 34405795  T
Q  553 aagtaattatacccaatctctttaccta 580  Q
    |||||||| ||||||||||||| |||||    
T  34405794 aagtaattctacccaatctcttgaccta 34405767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 378 - 580
Target Start/End: Complemental strand, 22159867 - 22159663
Alignment:
Q  378 ttgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttg 475  Q
    ||||||||||||||||  |||  |||| |||  ||||||||||||||||||||||| |||||||||||||||||| ||| || |||| ||||||||||||    
T  22159867 ttgccctaggcagttggattggtttttataaagtaaacgtaaataaaacaataaaaattggttttaagaatattagagagaaatatggttaagacctttg 22159768  T
Q  476 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttt 575  Q
    |||||| ||||||||| ||||||||| | ||||||||| |||||||||||  ||||||||| ||||||||||||||||||||| | |||||||||||||     
T  22159767 aatcctccgaagttctcctatggtaaatcgcactcctagttcaatcaatgactatctagttcaacgatagattaacaaagtaactctacccaatctcttg 22159668  T
Q  576 accta 580  Q
    |||||    
T  22159667 accta 22159663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 257 - 574
Target Start/End: Complemental strand, 33575331 - 33575013
Alignment:
Q  257 tagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaaaa 355  Q
    |||| |||||||||||||||||||  | ||||||||| |||| |||||||| ||||||||||| ||  |||| ||||| | |||||       || ||||    
T  33575331 tagaaatttggcaagtgaaccaaattcaatcgaagtaataaa-aaattcgttttcacgaggactgtatttaacttctatttagcaattttattattaaaa 33575233  T
Q  356 aggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatattaaag 453  Q
    ||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| |||| ||| | |    
T  33575232 aggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttagaaaattga-g 33575135  T
Q  454 ataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagattaaca 552  Q
    | ||||||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||||||||| ||||||||| |||| |||||| ||||  |||||||     
T  33575134 agaagtatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcctaattacaatcaatgattatttagtttcacgacggattaact 33575035  T
Q  553 aagtaattatacccaatctctt 574  Q
     ||||||| |||||||||||||    
T  33575034 tagtaattctacccaatctctt 33575013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 15532200 - 15532528
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||| ||||||||||  | ||||||||| |||| |||||||| | ||||||||| ||  |||| ||||||| |||||       || |    
T  15532200 tgatagatatttggcatgtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 15532298  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttgg-ttttaagaatatt 449  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||| ||||||||| |||    
T  15532299 aaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt 15532397  T
Q  450 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 548  Q
      ||| ||||||| ||||| |||| |||||||   ||| ||| || ||||||||||||||||| ||| | ||||||| |||| |||||| |||| |||||    
T  15532398 -gagagaagtatggttaagtccttcgaatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagatt 15532496  T
Q  549 aacaaagtaattatacccaatctctttaccta 580  Q
    |||  ||||||| ||||||||||||| |||||    
T  15532497 aacttagtaattctacccaatctcttgaccta 15532528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 256 - 580
Target Start/End: Original strand, 15542384 - 15542710
Alignment:
Q  256 atagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaaa 354  Q
    ||||| |||||||||||||||||||  | ||||||||| |||| |||||||| | ||||||||| ||  |||| ||||||| | |||       || |||    
T  15542384 atagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttaacaatttcattattaaa 15542482  T
Q  355 aaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatattaa 451  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| ||| |    
T  15542483 aaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattga 15542581  T
Q  452 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagattaa 550  Q
     || ||||||| ||||| |||| |||||||   ||| ||| || ||||||||||||||||||| | | ||||||| |||| |||||| |||| |||||||    
T  15542582 -gagaagtatggttaagtccttcgaatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagattaa 15542680  T
Q  551 caaagtaattatacccaatctctttaccta 580  Q
    |  ||||||| ||||||||||||| |||||    
T  15542681 cttagtaattctacccaatctcttgaccta 15542710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 350 - 580
Target Start/End: Original strand, 26712437 - 26712669
Alignment:
Q  350 tcaaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaa-taaaag-ttggttttaagaa 445  Q
    ||||||||||||| |||| |||||||| | |||||||| ||||||||||| |||||||||||||||  || |||||  | |||||| ||||||||| |||    
T  26712437 tcaaaaaggatgtgtaaaatttatatt-agtgccctagacagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttta-gaa 26712534  T
Q  446 tattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatag 545  Q
     ||   ||| ||| ||| ||||| | || ||||||| ||| | ||| ||||| ||||||||||||||||||||||||||| |||| |||||| |||| ||    
T  26712535 aatctgagagaagaatggttaagtctttcgaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatgattatttagtttcacgacag 26712634  T
Q  546 attaacaaagtaattatacccaatctctttaccta 580  Q
    ||||||  ||||||| ||||||||||||| |||||    
T  26712635 attaacttagtaattctacccaatctcttgaccta 26712669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 350 - 580
Target Start/End: Original strand, 26982175 - 26982407
Alignment:
Q  350 tcaaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaa-taaaag-ttggttttaagaa 445  Q
    ||||||||||||| |||| |||||||| | |||||||| ||||||||||| |||||||||||||||  || |||||  | |||||| ||||||||| |||    
T  26982175 tcaaaaaggatgtgtaaaatttatatt-agtgccctagacagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttta-gaa 26982272  T
Q  446 tattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatag 545  Q
     ||   ||| ||| ||| ||||| | || ||||||| ||| | ||| ||||| ||||||||||||||||||||||||||| |||| |||||| |||| ||    
T  26982273 aatctgagagaagaatggttaagtctttcgaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatgattatttagtttcacgacag 26982372  T
Q  546 attaacaaagtaattatacccaatctctttaccta 580  Q
    ||||||  ||||||| ||||||||||||| |||||    
T  26982373 attaacttagtaattctacccaatctcttgaccta 26982407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 21680721 - 21680634
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| |||||||||||| ||||||||||||||||||||||  || || |||| |||||||||||||||||||||||||| |||||    
T  21680721 tgatagatatttggcaagtgtaccaaaactatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaa 21680634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 33921459 - 33921372
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| ||| |||||||| ||||||||||||||||||||||  || ||||||| ||||||||||||||| |||||||||| |||||    
T  33921459 tgatagatattcggcaagtgtaccaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgtgaatttctacttagcaa 33921372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 254 - 341
Target Start/End: Original strand, 2499762 - 2499850
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaac-tatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| |||||||||||| |||||||  ||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  2499762 tgatagatatttggcaagtgtaccaaaagatatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 2499850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 1810198 - 1810272
Alignment:
Q  262 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctact 335  Q
    ||||| |||||| ||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||||    
T  1810198 atttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtattcacgaggaccgttgttaatttctact 1810272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 519
Target Start/End: Original strand, 11988991 - 11989133
Alignment:
Q  381 ccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttgaat 478  Q
    ||||||||||||||||||  |||||||||||||||  |   ||||| ||||||| | | ||| |||| |||| ||| ||||| | |||||||||| ||||    
T  11988991 ccctaggcagttgagttgatttttgtaacataaacagattaaaaacgataaaagattgattttagaaaattagagagaagtaaggttaagaccttcgaat 11989090  T
Q  479 cctacgaagttcttctat--ggtaatttgcactcctaattcaa 519  Q
    ||| | ||||||| ||||  ||||||||||||||||| |||||    
T  11989091 cctccaaagttctcctatatggtaatttgcactcctagttcaa 11989133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 36331075 - 36330999
Alignment:
Q  261 gatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 337  Q
    |||||| |||||| ||| || ||||||||||| |||  ||||| | || ||||||||||||||||||||||||||||    
T  36331075 gatttgacaagtgtacctaatctatcgaagtaataataaaatttgcatccacgaggaccgttgttaatttctactca 36330999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 515 - 580
Target Start/End: Original strand, 23993320 - 23993385
Alignment:
Q  515 ttcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 580  Q
    |||||||||||| || |||||||||||||| |||||||||  | || ||||||||||||| |||||    
T  23993320 ttcaatcaatgtctacctagtttaacgatatattaacaaaacagttctacccaatctcttgaccta 23993385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 9691125 - 9691083
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaa 296  Q
    ||||||| |||||||||||| |||||||| |||||||||||||    
T  9691125 tgatagaaatttggcaagtgtaccaaaaccatcgaagtagtaa 9691083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 25185741 - 25185699
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaa 296  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||    
T  25185741 tgatagatatttgacaagtgtaccaaaactatcgaagtagtaa 25185699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 19686517 - 19686465
Alignment:
Q  267 gcaagtgaaccaaaactatcgaagtagt-aaataaattcgtattcacgaggac 318  Q
    ||||||| || ||||||||||||||||| |||||| ||||||| |||||||||    
T  19686517 gcaagtgtactaaaactatcgaagtagtaaaataagttcgtatccacgaggac 19686465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 13496232 - 13495906
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||       |||||    
T  13496232 tgatagagatttgacaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaa 13496133  T
Q  354 aaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaag 453  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  13496132 aaaggatgtataaatttatattgattgtcctaggcagttgaattgttttgtaacataaacgtaaataaaacaataaaagttgattttaagaatattagag 13496033  T
Q  454 ataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaa 553  Q
    | ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| ||    
T  13496032 agaagtatggttaagacctttgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctactttaacgacagattaagaa 13495933  T
Q  554 agtaattatacccaatctctttaccta 580  Q
    |||||||||| |||||||||| |||||    
T  13495932 agtaattatatccaatctcttgaccta 13495906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 13493508 - 13493181
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||       ||||    
T  13493508 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 13493409  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  13493408 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 13493309  T
Q  453 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 552  Q
    || ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  13493308 gagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaaca 13493209  T
Q  553 aagtaattatacccaatctctttaccta 580  Q
    |||||||| ||||||||||||| |||||    
T  13493208 aagtaattctacccaatctcttgaccta 13493181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 10765165 - 10764838
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||       ||||    
T  10765165 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 10765066  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  10765065 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 10764966  T
Q  453 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 552  Q
    || ||||||| |||||||||| |||||||  |||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  10764965 gagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaacttgcactcctaattcaagcaatgattatctagtttaacgacagattaaca 10764866  T
Q  553 aagtaattatacccaatctctttaccta 580  Q
    |||||||| ||||||||||||| |||||    
T  10764865 aagtaattctacccaatctcttgaccta 10764838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 32505857 - 32506181
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttg----ttaatttctactcagcaannnnnnna 349  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||  |||||| |||||||||| |||    |||| ||||||||  |||       |    
T  32505857 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtatccacgaggaccattgcatgttaacttctactcgacaatttcttta 32505956  T
Q  350 tcaaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatt 449  Q
    ||||||||||||||||||||||||||||| ||   |||||||||     |||| ||||||||||| |   ||||||||||||||||||||||||||||||    
T  32505957 tcaaaaaggatgtataaatttatattgat-gcgtgaggcagttg-----ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatatt 32506050  T
Q  450 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatta 549  Q
    | ||| |||| || |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  32506051 atagagaagtgtggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagatta 32506150  T
Q  550 acaaagtaattatacccaatctctttaccta 580  Q
    ||||||||||| ||||||||||||| |||||    
T  32506151 acaaagtaattctacccaatctcttgaccta 32506181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 39546486 - 39546161
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| ||||||| || ||||||||||       ||| |    
T  39546486 tgatagagatttggcaagtgaaccaaaattattgaagtaataaataagatcgtat-cacgaggaccattgttaacttttactcagcaatttcattatcga 39546388  T
Q  354 aaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 451  Q
    || |||||||| || ||  |||| ||||||||||||||||  |||  ||||||||| |||||| ||||||||||||||||||||||||||| |||||||     
T  39546387 aa-ggatgtattaaattcaattg-ttgccctaggcagttggattggtttttgtaacgtaaacgcaaataaaacaataaaagttggttttaaaaatattag 39546290  T
Q  452 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 551  Q
    ||| ||||||| |||||||||| ||||||| |||||||||  |||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||    
T  39546289 agagaagtatggttaagaccttcgaatcctccgaagttctcatatggtaatttgcactcctaattcaagcaatgattatctagtttcacgacagattaac 39546190  T
Q  552 aaagtaattatacccaatctctttaccta 580  Q
    ||||||| | ||||||||||||| |||||    
T  39546189 aaagtaactctacccaatctcttgaccta 39546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 379 - 579
Target Start/End: Complemental strand, 34066466 - 34066264
Alignment:
Q  379 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttg 475  Q
    |||||||||||||||| |||  |||||||||||||||| |   ||||||||||||| ||||||||| ||| |||| ||| ||||||| |||||||||| |    
T  34066466 tgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaagtatggttaagaccttcg 34066368  T
Q  476 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttt 575  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||     
T  34066367 aatcctccgaagttctcctatgataatttgcactcctaattcaatcaatgattatctagtttaacgatagattaacaaagtaattctacccaatctcttg 34066268  T
Q  576 acct 579  Q
    ||||    
T  34066267 acct 34066264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 254 - 574
Target Start/End: Original strand, 16190179 - 16190499
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    |||| |||||||| |||||||| |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| || ||  |||       |  |     
T  16190179 tgatggagatttgacaagtgaatcaaaactatcgaagtaataaataaattcgtatccacgaggactgttgttaatttttattcgacaaaaacgttaaaat 16190278  T
Q  354 aaaggatgtataaatttatattgattgccctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 451  Q
    ||||||||||| || ||  || |  ||||||||| | |||||||| |  |||||||||||||| |   |||||||||||  ||||||||| ||| |||||    
T  16190279 aaaggatgtattaaattcaatgg--tgccctaggaaattgagttgatgtttgtaacataaacgaattaaaaacaataaagattggtttta-gaaaattaa 16190375  T
Q  452 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 551  Q
    ||| ||||||| |||||||||| ||||||| ||||||||| ||||| |||||||||||| |||||||| ||||| |||||||||||||||| | ||||||    
T  16190376 agagaagtatggttaagaccttcgaatcctccgaagttctcctatgataatttgcactcttaattcaagcaatgattatctagtttaacgacaaattaac 16190475  T
Q  552 aaagtaat-tatacccaatctctt 574  Q
    ||| |||| |||||||||||||||    
T  16190476 aaaataatatatacccaatctctt 16190499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 378 - 580
Target Start/End: Original strand, 27282230 - 27282434
Alignment:
Q  378 ttgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttg 475  Q
    ||||||||||||||||  |||  |||| |||  |||| |||||||||||||| ||| ||||||||| |||||||| ||| ||||||| ||||||| || |    
T  27282230 ttgccctaggcagttggattggtttttataaagtaaatgtaaataaaacaattaaaattggttttatgaatattagagagaagtatggttaagactttcg 27282329  T
Q  476 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttt 575  Q
    ||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||| |||||  |||||||||||||||| |||||||||||||     
T  27282330 aattctccgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagttcaacgaccgattaacaaagtaattctacccaatctcttg 27282429  T
Q  576 accta 580  Q
    |||||    
T  27282430 accta 27282434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 433 - 574
Target Start/End: Complemental strand, 1936691 - 1936551
Alignment:
Q  433 ttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatct 532  Q
    ||||||||| ||| |||| ||| ||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  1936691 ttggtttta-gaaaattagagagaagtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctagttcaatcaatgattatct 1936593  T
Q  533 agtttaacgatagattaacaaagtaattatacccaatctctt 574  Q
    || || |||| ||||||||||||||| | |||| ||||||||    
T  1936592 agcttcacgaaagattaacaaagtaactctaccaaatctctt 1936551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 447 - 580
Target Start/End: Complemental strand, 15297383 - 15297251
Alignment:
Q  447 attaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgataga 546  Q
    |||||||| || ||||||||||||||| ||||||| ||| ||||||| | |||||||||||| || |||||||||||| || |||||||||||||| |||    
T  15297383 attaaagagaaatatgattaagaccttcgaatcctccgatgttcttccacggtaatttgcacccc-aattcaatcaatattcatctagtttaacgacaga 15297285  T
Q  547 ttaacaaagtaattatacccaatctctttaccta 580  Q
    |||||||||||||| ||||||||||||| |||||    
T  15297284 ttaacaaagtaattctacccaatctcttgaccta 15297251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 466 - 580
Target Start/End: Original strand, 22456705 - 22456818
Alignment:
Q  466 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 565  Q
    |||||||| ||||||| ||||||||| |||||| |||||| || |||| |||||||||||||  ||||||||||||| ||| ||||||||||||| ||||    
T  22456705 aagaccttcgaatcctccgaagttctcctatggaaatttgtaccccta-ttcaatcaatgttcgtctagtttaacgacagactaacaaagtaattctacc 22456803  T
Q  566 caatctctttaccta 580  Q
    ||||||||| |||||    
T  22456804 caatctcttgaccta 22456818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 466 - 572
Target Start/End: Complemental strand, 49147930 - 49147825
Alignment:
Q  466 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 565  Q
    |||||||| ||||||| ||||||||| |||||| |||||| || |||| |||||||||||||  ||||||||||||| ||||||||||||||||| ||||    
T  49147930 aagaccttcgaatcctccgaagttctcctatggaaatttgtaccccta-ttcaatcaatgttcgtctagtttaacgacagattaacaaagtaattctacc 49147832  T
Q  566 caatctc 572  Q
    |||||||    
T  49147831 caatctc 49147825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 459 - 580
Target Start/End: Complemental strand, 21153295 - 21153174
Alignment:
Q  459 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 558  Q
    |||| |||||||||| ||||||| ||| | ||||  |||||||||||||| || ||||||||||||||| || ||||||||||| ||||||||| |||||    
T  21153295 tatggttaagaccttcgaatcctccgatgctcttaaatggtaatttgcacccccaattcaatcaatgttcatttagtttaacgacagattaacacagtaa 21153196  T
Q  559 ttatacccaatctctttaccta 580  Q
    || ||| ||||||||| |||||    
T  21153195 ttctactcaatctcttgaccta 21153174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 254 - 341
Target Start/End: Original strand, 34552438 - 34552525
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  34552438 tgatagatatttgacaagtgtaccaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 34552525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 18392747 - 18392669
Alignment:
Q  264 ttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    |||||||||| ||||||| |||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  18392747 ttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 18392669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 267 - 334
Target Start/End: Complemental strand, 15297559 - 15297492
Alignment:
Q  267 gcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctac 334  Q
    ||||||| |||||||||||||||||||||||| ||||| ||| |||| ||||||||||||| ||||||    
T  15297559 gcaagtgtaccaaaactatcgaagtagtaaatgaattcatatccacggggaccgttgttaacttctac 15297492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 48505874 - 48505937
Alignment:
Q  146 aacacaacaacaaaaagggaaaatcaatcggggtttcaattctcattctattgcatgccaattt 209  Q
    ||||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  48505874 aacacaaaaacaaaatgggaaaatcaattagggtttcaattctcattctattgcatgtcaattt 48505937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 379 - 450
Target Start/End: Complemental strand, 8435357 - 8435284
Alignment:
Q  379 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 450  Q
    ||||||||||||||||||||  ||||||||||||||| |||  ||||||||||||||||||||| |||| ||||    
T  8435357 tgccctaggcagttgagttgatttttgtaacataaacataataaaaacaataaaagttggtttttagaaaatta 8435284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 49716735 - 49716647
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| | ||| |||||| ||||||| ||||||||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  49716735 tgatagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 49716647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 49720192 - 49720129
Alignment:
Q  278 aaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||||||||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  49720192 aaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 49720129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 262 - 335
Target Start/End: Complemental strand, 6206237 - 6206164
Alignment:
Q  262 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctact 335  Q
    |||| ||||||| || |||| ||||||||||||||  || ||||||| |||||| |||||||||||||||||||    
T  6206237 atttagcaagtgtactaaaattatcgaagtagtaataaagttcgtatccacgagaaccgttgttaatttctact 6206164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 533 - 580
Target Start/End: Original strand, 22453415 - 22453462
Alignment:
Q  533 agtttaacgatagattaacaaagtaattatacccaatctctttaccta 580  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  22453415 agtttaacgacagattaacaaagtaattctacccaatctcttgaccta 22453462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 527 - 580
Target Start/End: Original strand, 23990362 - 23990415
Alignment:
Q  527 ttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 580  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||| ||| |||||    
T  23990362 ttatctagttcaacgacagattaacaaagtaattctacccaatcacttgaccta 23990415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 341
Target Start/End: Original strand, 50196723 - 50196803
Alignment:
Q  262 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    |||||||||||| ||||||| |||| |||||| |||  ||||| |||| ||||||||||||||||||| || ||| |||||    
T  50196723 atttggcaagtgtaccaaaaactattgaagtaataataaaatttgtatccacgaggaccgttgttaatctcaacttagcaa 50196803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 48505811 - 48505851
Alignment:
Q  146 aacacaacaacaaaaagggaaaatcaatcggggtttcaatt 186  Q
    ||||||| ||||||||||||||||||||  |||||||||||    
T  48505811 aacacaaaaacaaaaagggaaaatcaattagggtttcaatt 48505851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 223; Significance: 1e-122; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 6967393 - 6967066
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||       ||||    
T  6967393 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 6967294  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  6967293 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 6967194  T
Q  453 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 552  Q
    || ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  6967193 gagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgatagattaaca 6967094  T
Q  553 aagtaattatacccaatctctttaccta 580  Q
    |||||||| ||||||||||||| |||||    
T  6967093 aagtaattctacccaatctcttaaccta 6967066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 24783654 - 24783327
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnn-atca 352  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||| ||||        ||||    
T  24783654 tgatagagatttgacaagtgaaccaaaactatcgaagtaataaataaatttgtatccacgaggaccgttgttaatttctactcggcaatttcttttatca 24783555  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  24783554 aaaaggatgtataaatttatattgattgtccaaggcagttgagttgttttgtaacataaacttaaataaaacaataaaagttggttttaagaatattaga 24783455  T
Q  453 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 552  Q
    || ||||||| |||||||||||||||||| |||||||||  ||||||||||| || ||||||||||||||||| |||||||||||||||| |||||||||    
T  24783454 gagaagtatggttaagacctttgaatcctccgaagttctcatatggtaattttcattcctaattcaatcaatgattatctagtttaacgagagattaaca 24783355  T
Q  553 aagtaattatacccaatctctttaccta 580  Q
    |||||||||||||||||||||| |||||    
T  24783354 aagtaattatacccaatctcttgaccta 24783327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 17866353 - 17866680
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||       ||||    
T  17866353 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 17866452  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  17866453 aaaaggatgtataaatttatattgattgccctaggcagttgagctgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 17866552  T
Q  453 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 552  Q
    || ||||||| || ||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  17866553 gagaagtatggtttagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaaca 17866652  T
Q  553 aagtaattatacccaatctctttaccta 580  Q
    |||||||| ||||||||||||| |||||    
T  17866653 aagtaattctacccaatctcttgaccta 17866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 361 - 580
Target Start/End: Original strand, 17863202 - 17863421
Alignment:
Q  361 gtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagta 460  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  17863202 gtataaatttatattgattgccctaggcagttgagctgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattagagagaagta 17863301  T
Q  461 tgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaatt 560  Q
    || |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  17863302 tggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagtaatt 17863401  T
Q  561 atacccaatctctttaccta 580  Q
     ||||||||||||| |||||    
T  17863402 ctacccaatctcttgaccta 17863421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 36842937 - 36843264
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||  ||| || ||| ||||||||||||||||||||||||||||       ||| |    
T  36842937 tgatagagatttggcaagtgaaccaaaattatcgaagtaataaataagatcgaatccacaaggaccgttgttaatttctactcagcaatttcgttatcga 36843036  T
Q  354 aaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 451  Q
    || |||||||| || ||  || | ||||||||||||||||  |||  |||| |||  ||||||||||||||||||||||||||||||||| ||||||||     
T  36843037 aa-ggatgtattaaattcaatggtttgccctaggcagttggattggtttttataaagtaaacgtaaataaaacaataaaagttggttttatgaatattag 36843135  T
Q  452 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 551  Q
    ||| ||||||| |||||||||| ||||||| ||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||| ||||| ||||||||    
T  36843136 agagaagtatggttaagaccttcgaatcctccgaagttctcctatggtaattcgcactcctacttcaatcaatgattatctagttcaacgacagattaac 36843235  T
Q  552 aaagtaattatacccaatctctttaccta 580  Q
    ||| ||| | ||||||||||||| |||||    
T  36843236 aaattaactctacccaatctcttgaccta 36843264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 254 - 542
Target Start/End: Complemental strand, 9766046 - 9765758
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||  ||| || ||  ||| |||||||||||||||||||||||        ||| |    
T  9766046 tgatagatatttggcaagttaaccaaaactatcgaagtaataaataagatcgaatccataagggccgttgttaatttctactcagcattttctttatcga 9765947  T
Q  354 aaaggatgtat-aaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 450  Q
    ||||||||||| |||||| |   | ||||||||||||||||  |||  |||| |||  ||||| ||||||||| ||||||||||||||||||||||||||    
T  9765946 aaaggatgtattaaatttct---ggttgccctaggcagttggattggtttttataaagtaaacataaataaaataataaaagttggttttaagaatatta 9765850  T
Q  451 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacga 542  Q
     ||| ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  9765849 gagagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttcacga 9765758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 262 - 574
Target Start/End: Complemental strand, 295098 - 294789
Alignment:
Q  262 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaaaaaggat 360  Q
    |||||||||||||||||||  | ||||||||| |||| ||||| || | ||||||||| ||  |||| ||||||| |||||       || |||||||||    
T  295098 atttggcaagtgaaccaaattcaatcgaagtaataaa-aaatttgtgtccacgaggactgtatttaacttctacttagcaatttcattattaaaaaggat 295000  T
Q  361 gta-taaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaag--ttggttttaagaatattaaagataa 457  Q
    ||| ||||||||||||||| |||| |||||||  |||||||||||||||||| | |   |||||  | | |||  ||||||||| ||| ||| | || ||    
T  294999 gtaataaatttatattgat-gcccgaggcagt--agttgttttgtaacataagc-tggttaaaagcaaataaggattggtttta-gaaaattga-gagaa 294906  T
Q  458 gtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagta 557  Q
    ||||| ||||| | || ||||||| ||||||||| ||||||||||||||||||||||| ||||||||| ||||||| || ||||| ||||||||||||||    
T  294905 gtatggttaagtctttcgaatcctccgaagttctcctatggtaatttgcactcctaatgcaatcaatgattatctaattcaacgacagattaacaaagta 294806  T
Q  558 attatacccaatctctt 574  Q
    |||||||||||||||||    
T  294805 attatacccaatctctt 294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 352 - 589
Target Start/End: Complemental strand, 11279639 - 11279401
Alignment:
Q  352 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaagttggttttaagaatat 448  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||||||  |   ||||| ||||||  |||||||| |||| ||    
T  11279639 aaaaaggatgtataaaatttatattggt-gccctaggcagttgagttgattttgtaacataaactgattaaaaacgaataaagattggtttttagaagat 11279541  T
Q  449 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 548  Q
    | | || ||||||| ||||| |||| ||||| | ||||||||| || |||||||||||||||||| |||||| |||| |||| |||||| |||| |||||    
T  11279540 tga-gagaagtatggttaagtccttcgaatctttcgaagttctcctctggtaatttgcactcctagttcaataaatgattatttagtttcacgacagatt 11279442  T
Q  549 aacaaagtaattatacccaatctctttacctatgcttctcc 589  Q
    |||  ||||||| ||||||||||||| ||||| | ||||||    
T  11279441 aacttagtaattctacccaatctcttgacctaggattctcc 11279401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 420 - 580
Target Start/End: Original strand, 46846479 - 46846639
Alignment:
Q  420 aaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattca 518  Q
    ||||||||||||| |||||||| |||| ||| | || ||||||| ||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||    
T  46846479 aaaacaataaaagattggtttttagaaaattga-gagaagtatggttaagtccttcgaatcctccgaagttcttctatggtaatttgcactcctagttca 46846577  T
Q  519 atcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 580  Q
    ||||||| |||| |||||| |||| ||||||||  | ||||| ||||||||||||| |||||    
T  46846578 atcaatgattatttagtttcacgacagattaacctaataattctacccaatctcttgaccta 46846639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 379 - 574
Target Start/End: Original strand, 23313384 - 23313581
Alignment:
Q  379 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttg 475  Q
    ||||||||| |||||| |||  |||||||||||||||| |   |||||||||||||  ||||||| |||| |||| ||| ||||||| ||||||||||||    
T  23313384 tgccctaggtagttgaattgatttttgtaacataaacgaattaaaaacaataaaagaatggtttt-agaaaattagagagaagtatggttaagacctttg 23313482  T
Q  476 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 574  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||| ||||| |||||||| || || | | |||||||  |||| | |||||||||||||    
T  23313483 aatcctccgaagttctcctatggtaatttgcactactaattcaaacaatgattatctaggttcacaacatattaacactgtaactctacccaatctctt 23313581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 352 - 580
Target Start/End: Original strand, 36222406 - 36222635
Alignment:
Q  352 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatat 448  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||| |||| ||||||||||  |   |||||||  |||| |||||||| |||| ||    
T  36222406 aaaaaggatgtataaaatttatattggt-gccctaggcagttgagttgattttctaacataaactgattaaaaacaaagaaagattggtttttagaagat 36222504  T
Q  449 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 548  Q
    | | || ||||||| ||||| |||| ||||||| ||||||||| |||||||||||| |||||||| ||||||||||| |||| |||||| || | | |||    
T  36222505 tga-gagaagtatggttaagtccttcgaatcctccgaagttctcctatggtaattttcactcctagttcaatcaatgattatttagtttcactacaaatt 36222603  T
Q  549 aacaaagtaattatacccaatctctttaccta 580  Q
    |||  ||||||| |||| |||||||| |||||    
T  36222604 aacttagtaattttacctaatctcttgaccta 36222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 379 - 580
Target Start/End: Original strand, 3862029 - 3862225
Alignment:
Q  379 tgccctaggcagttgagttg---ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagaccttt 474  Q
    |||||||||||||| | |||   |||||||||||||||  |   ||||||||||||| |||||||||  || |||| ||| ||||||||||||||||||     
T  3862029 tgccctaggcagttcaattgattttttgtaacataaactgattaaaaacaataaaagattggttttataaa-attagagagaagtatgattaagaccttc 3862127  T
Q  475 gaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 574  Q
    ||||||| ||||||||| |||||        ||||||||||||||  |||| |||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  3862128 gaatccttcgaagttctcctatg--------cactcctaattcaagaaatgattatctagttcaacgacagattaacaaagtaattctacccaatctctt 3862219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 352 - 574
Target Start/End: Original strand, 23759706 - 23759930
Alignment:
Q  352 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatat 448  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| ||    
T  23759706 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 23759804  T
Q  449 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagat 547  Q
      | || ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  |||    
T  23759805 cga-gagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggat 23759903  T
Q  548 taacaaagtaattatacccaatctctt 574  Q
    ||||  ||||||| |||||||||||||    
T  23759904 taacttagtaattctacccaatctctt 23759930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 253 - 369
Target Start/End: Original strand, 17857879 - 17857996
Alignment:
Q  253 atgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatc 351  Q
    |||||||| |||||||||||| ||||||| |||||||| ||||||  || ||||||| ||||||||||||||||||||||||||| ||||       |||    
T  17857879 atgatagatatttggcaagtgtaccaaaagctatcgaaatagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatc 17857978  T
Q  352 aaaaaggatgtataaatt 369  Q
    ||||||||||||||||||    
T  17857979 aaaaaggatgtataaatt 17857996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 580
Target Start/End: Complemental strand, 33313143 - 33312913
Alignment:
Q  352 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaag-ttggttttaagaata 447  Q
    ||||||||||| |||| ||||||||| | ||||||||||||||||||| |||||||||||||||| || |||||  |||||| | ||||||||| ||| |    
T  33313143 aaaaaggatgtgtaaaatttatattggt-gccctaggcagttgagttgattttgtaacataaacggaattaaaaataataaaggattggtttta-gaaaa 33313046  T
Q  448 ttaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 547  Q
    |   ||| ||  ||| ||||| |||| |||||||  |||| ||| ||||||||||||||  ||||||||||||||||| |||| |||||| ||||   ||    
T  33313045 tctgagagaaaaatggttaagtccttcgaatcctctgaagctctcctatggtaatttgctttcctaattcaatcaatgattatttagtttcacgacgaat 33312946  T
Q  548 taacaaagtaattatacccaatctctttaccta 580  Q
    ||||  ||||||| |||||||||| || |||||    
T  33312945 taacttagtaattctacccaatcttttgaccta 33312913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 382 - 569
Target Start/End: Complemental strand, 23108106 - 23107917
Alignment:
Q  382 cctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaat 478  Q
    ||||| ||||||||||| |  |||||||||||||| |   ||||||||||||| ||||||||| ||| |||| ||| || | || |||||||||| ||||    
T  23108106 cctagacagttgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaaatgtggttaagaccttcgaat 23108008  T
Q  479 cctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaat 569  Q
    | | ||||| ||| ||||||||||||||||||||| ||||| ||||| |||| |||||| || | ||||||||  ||||| | ||||||||    
T  23108007 catccgaagctctcctatggtaatttgcactcctagttcaaacaatgattatttagtttcacaacagattaacttagtaactctacccaat 23107917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 38431757 - 38431669
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| |||||| ||||| ||||||| |||||||||||||||  || ||||||| || ||||||||||||||||||||||| |||||    
T  38431757 tgatagatatttggaaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccatgaggaccgttgttaatttctacttagcaa 38431669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 262 - 341
Target Start/End: Original strand, 3540932 - 3541011
Alignment:
Q  262 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    |||||||||||| |||||||||||| |||||||||  || ||||||| ||||||||||||||| || ||||||| |||||    
T  3540932 atttggcaagtgtaccaaaactatcaaagtagtaataaagttcgtatccacgaggaccgttgtgaacttctacttagcaa 3541011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 6964643 - 6964563
Alignment:
Q  262 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    |||||| ||||| ||||||| |||||||||||||||  || ||||||| ||||||| |||||||||||||||||| |||||    
T  6964643 atttggtaagtgtaccaaaaactatcgaagtagtaatgaagttcgtatccacgagggccgttgttaatttctacttagcaa 6964563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 28577687 - 28577761
Alignment:
Q  263 tttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 337  Q
    ||||||||||| |||||||||||||||| | |||  |||||| |||  ||||||||||||||||| |||||||||    
T  28577687 tttggcaagtgtaccaaaactatcgaagcaataatcaaattcatatctacgaggaccgttgttaacttctactca 28577761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 46846367 - 46846455
Alignment:
Q  310 cacgaggaccgttgttaatttctactcagcaannnnnnnatcaaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg 398  Q
    ||||||||| ||  |||||||||||| |||||       || |||||||||||||||| ||||||||| | |||||||||||||||||||    
T  46846367 cacgaggactgtatttaatttctacttagcaatttcattattaaaaaggatgtataaaatttatattggt-gccctaggcagttgagttg 46846455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 14790864 - 14790537
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||       ||||    
T  14790864 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 14790765  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  14790764 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 14790665  T
Q  453 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 552  Q
    || ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  14790664 gagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaaca 14790565  T
Q  553 aagtaattatacccaatctctttaccta 580  Q
    |||||||| ||||||||||||| |||||    
T  14790564 aagtaattctacccaatctcttgaccta 14790537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 14795892 - 14795565
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||   |||||||||||||||||||||||||| ||||       ||||    
T  14795892 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtacctacgaggaccgttgttaatttctactcggcaatttctttatca 14795793  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  14795792 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattaga 14795693  T
Q  453 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 552  Q
    || ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  14795692 gagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaaca 14795593  T
Q  553 aagtaattatacccaatctctttaccta 580  Q
    |||||||| ||||||||||||| |||||    
T  14795592 aagtaattctacccaatctcttgaccta 14795565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 250 - 580
Target Start/End: Complemental strand, 1838724 - 1838393
Alignment:
Q  250 ctaatgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnna 349  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||       |    
T  1838724 ctaatgatagagatttggcaagtgaaccaaaattatcgaagtaataaataaattcgtatccacaaggaccgttgttaatttctactcggcaatttcttta 1838625  T
Q  350 tcaaaaaggatgtataaatttatattga-ttgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaat 446  Q
    |||||||||||||||||||||||||||| ||  ||||| ||||||  |||  |||| |||  ||||||| ||||||| ||||||||||||||||||||||    
T  1838624 tcaaaaaggatgtataaatttatattgatttttcctagacagttggattggtttttataaagtaaacgt-aataaaagaataaaagttggttttaagaat 1838526  T
Q  447 attaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgataga 546  Q
    |||| ||| ||||||| |||||||||| ||||||| ||||||||| |||| |||||| ||||||||| ||||||||| | |||| ||||| ||||| |||    
T  1838525 attagagagaagtatggttaagaccttcgaatcctccgaagttctcctat-gtaattcgcactcctagttcaatcaacgattatttagttcaacgacaga 1838427  T
Q  547 ttaacaaagtaattatacccaatctctttaccta 580  Q
    |||||||||||| | ||||||||||||| |||||    
T  1838426 ttaacaaagtaactctacccaatctcttgaccta 1838393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 255 - 580
Target Start/End: Original strand, 19664667 - 19664991
Alignment:
Q  255 gatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaaa 354  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| ||||||||||| |||       ||||||    
T  19664667 gataaagatttggcaagtgaaccaaaactatcgaagtaataaataaatttgtatccacgaggaccgttgtttatttctactcaacaatttctttatcaaa 19664766  T
Q  355 aaggatgtataaatttatattgattgccctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    |||||||||| || ||  |  | ||||||||||||||||  ||| |  |||||| ||||||| |   ||||||||||||||| | |||||||| |||| |    
T  19664767 aaggatgtattaaattcaa--ggttgccctaggcagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttaagaaaattaga 19664864  T
Q  453 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 552  Q
    || | ||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||| || |||| |||||||||    
T  19664865 gagatgtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctag-ttcacgacagattaaca 19664963  T
Q  553 aagtaattatacccaatctctttaccta 580  Q
    |||||| | |||||||| |||| |||||    
T  19664964 aagtaactctacccaatatcttgaccta 19664991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 397 - 574
Target Start/End: Original strand, 32704398 - 32704575
Alignment:
Q  397 tgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctat 496  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||||||| |||||||  |||||||| ||||    
T  32704398 tgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctat 32704497  T
Q  497 ggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 574  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  32704498 ggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacagagtaattctacccaatctctt 32704575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 378 - 580
Target Start/End: Original strand, 20527285 - 20527490
Alignment:
Q  378 ttgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaa-caataaaagttggttttaagaatattaaagataagtatgattaagaccttt 474  Q
    ||||||||||||||||| |||  ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||     
T  20527285 ttgccctaggcagttgaattgatttttgtaacgtaaacataaataaaaacaataaaagttggttttaagaatattagagagaagtatggttaagaccttc 20527384  T
Q  475 gaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 574  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||  || |||| ||||||||||| ||| | |||||||||||||    
T  20527385 gaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctaacttcacgacagattaacaaattaactttacccaatctctt 20527484  T
Q  575 taccta 580  Q
     |||||    
T  20527485 gaccta 20527490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 15535300 - 15534975
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    |||| ||||||| ||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| |       || ||    
T  15535300 tgatggagatttcgcatgtgaaccaaaattatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcagccatttctttataaa 15535201  T
Q  354 aaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    ||||||||||| || ||  |  | ||||||||||||||||||||| |||||||| | |||   |   ||||||||||||||| | ||| | || ||||||    
T  15535200 aaaggatgtattaaattcaa--ggttgccctaggcagttgagttgattttgtaaaacaaatagattaaaaacaataaaagtttggttttacaaaattaaa 15535103  T
Q  453 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 552  Q
    |  | ||||| ||||||||||  |||||| ||||||| | ||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||    
T  15535102 gtgatgtatggttaagaccttcaaatcctccgaagttttcctatggtaatttgcattcctaattcaatcaatgattatctagttcaacgacagattaaca 15535003  T
Q  553 aagtaattatacccaatctctttaccta 580  Q
    |||||| | || |||||||||| |||||    
T  15535002 aagtaactctaaccaatctcttgaccta 15534975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 253 - 524
Target Start/End: Complemental strand, 27649347 - 27649077
Alignment:
Q  253 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||  ||| || |||||||||||||||||||| |||||||||||        ||     
T  27649347 atgatagagatttggcaagtgaactaaaactatcgaagtaataaataagatcgaatccacgaggaccgttgttaattcctactcagcaatttctttctcg 27649248  T
Q  353 aaaaggatgtat-aaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatt 449  Q
    ||| ||||| || ||||||   ||| | ||||||||||||||  |||  |||| ||||||||||||| || ||||||||||||||||||||||||| |||    
T  27649247 aaa-ggatgcattaaattt---ttggtcgccctaggcagttggattggtttttataacataaacgtagatgaaacaataaaagttggttttaagaaaatt 27649152  T
Q  450 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaat 524  Q
    | ||  ||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||| ||||    
T  27649151 agagcgaagtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcacttctaattcaagcaat 27649077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 254 - 519
Target Start/End: Complemental strand, 32427544 - 32427281
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    ||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||| |||||||||||||       |||||    
T  32427544 tgatagatatttggtaagtgaaccaaaactatcgaagtaataaataaatttgtatctacgaggaccgttgttaa-ttctactcagcaatttctttatcaa 32427446  T
Q  354 aaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 451  Q
    ||| ||||||| || ||  |  | |||||||| |||||||  |||   ||||||| ||||||| |   |||||||| |||||| | ||| |||| ||||     
T  32427445 aaaagatgtattaaattcaa--ggttgcccta-gcagttggattggtatttgtaaaataaacgaattaaaaacaatgaaagtttggttttagaaaattag 32427349  T
Q  452 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaa 519  Q
    ||| | || |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  32427348 agagatgtttgattaagacctttgaatcctctgaagttctcctatggtaatttgcactcctaattcaa 32427281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 381 - 580
Target Start/End: Complemental strand, 16883795 - 16883594
Alignment:
Q  381 ccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaa 477  Q
    |||||||||||||| |||  |||||||||||||||| |   ||||||||||||| ||||||||| ||| |||| ||| ||||||| ||||||| || |||    
T  16883795 ccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaagtatggttaagacattcgaa 16883697  T
Q  478 tcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttac 577  Q
    |||| ||||||||| ||||||||||||||||| ||||||||| ||||| |||||||  || |||| ||||||||| | |||   ||||||||||||| ||    
T  16883696 tccttcgaagttctcctatggtaatttgcactactaattcaaacaatgattatctatgttcacgaaagattaacacaataaccctacccaatctcttgac 16883597  T
Q  578 cta 580  Q
    |||    
T  16883596 cta 16883594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 13017189 - 13017517
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| || ||||| | |||||||||  |  |||| ||||||| |||||       || |    
T  13017189 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aagttcgtttccacgaggactatatttaacttctacttagcaatttcattatta 13017287  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttta-agaatatt 449  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | ||||||||  |||| |||    
T  13017288 aaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttcagaaaatt 13017386  T
Q  450 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 548  Q
     | || ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| |||   ||||||| |||| |||||| ||||  ||||    
T  13017387 ga-gagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatatgatcaatgattatttagtttcacgacggatt 13017485  T
Q  549 aacaaagtaattatacccaatctctttaccta 580  Q
    |||  ||||||| ||||||||||||| |||||    
T  13017486 aacttagtaattctacccaatctcttgaccta 13017517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 22221967 - 22221642
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||| | |||||||||  |  |||  ||||||| |||||       || |    
T  22221967 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaa-taaattcgtttccacgaggactatatttagcttctactaagcaatttcattatta 22221869  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttaagaatatt 449  Q
    |||||||||||||||||  ||||| | ||||||||||||||||||| ||| ||||  ||||| ||| ||||| ||||||| | |||||||| |||| |||    
T  22221868 aaaaggatgtataaattattattggt-gccctaggcagttgagttgatttagtaa--taaac-taattaaaaacaataaagaattggtttttagaaaatt 22221773  T
Q  450 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 548  Q
     | || ||| ||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||| | ||| ||||||||| |||| |||| | ||||  ||||    
T  22221772 ga-gagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcttaaatacaatcaatgattatttagtatcacgacggatt 22221674  T
Q  549 aacaaagtaattatacccaatctctttaccta 580  Q
    |||  ||||||| ||||||||||||| |||||    
T  22221673 aacttagtaattctacccaatctcttgaccta 22221642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 22247802 - 22247477
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||| | |||||||||  |  |||  ||||||| |||||       || |    
T  22247802 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaa-taaattcgtttccacgaggactatatttagcttctactaagcaatttcattatta 22247704  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttaagaatatt 449  Q
    |||||||||||||||||  ||||| | ||||||||||||||||||| ||| ||||  ||||| ||| ||||| ||||||| | |||||||| |||| |||    
T  22247703 aaaaggatgtataaattattattggt-gccctaggcagttgagttgatttagtaa--taaac-taattaaaaacaataaagaattggtttttagaaaatt 22247608  T
Q  450 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 548  Q
     | || ||| ||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||| | ||| ||||||||| |||| |||| | ||||  ||||    
T  22247607 ga-gagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcttaaatacaatcaatgattatttagtatcacgacggatt 22247509  T
Q  549 aacaaagtaattatacccaatctctttaccta 580  Q
    |||  ||||||| ||||||||||||| |||||    
T  22247508 aacttagtaattctacccaatctcttgaccta 22247477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 259 - 491
Target Start/End: Complemental strand, 15540809 - 15540578
Alignment:
Q  259 gagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaaaaagg 358  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||  ||   ||||| ||||||| |||||||||||||       ||||||||||    
T  15540809 gagatttggcaagtgaaccaaaactatcgaagtaataaataaatttgtaaccaatcggaccattgttaacttctactcagcaatttctatatcaaaaagg 15540710  T
Q  359 atgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataa 457  Q
    |||||| || ||  |  | || |||||||||||||||||| |||| ||| ||||| | |   |||||||||||||||   ||| |||| |||||||| |     
T  15540709 atgtattaaattcaa--ggtttccctaggcagttgagttgattttctaaaataaagggattaaaaacaataaaagtttagttttagaaaattaaagagat 15540612  T
Q  458 gtatgattaagacctttgaatcctacgaagttct 491  Q
     |||| |||||||||| ||||||| |||||||||    
T  15540611 ttatggttaagaccttcgaatcctccgaagttct 15540578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 466 - 580
Target Start/End: Original strand, 12980705 - 12980818
Alignment:
Q  466 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 565  Q
    |||||||| ||||||| ||||||||| |||||  |||||| || |||| |||||||||||||  ||||||||||||| ||||||||||||||||| ||||    
T  12980705 aagaccttcgaatcctccgaagttctcctatgaaaatttgtaccccta-ttcaatcaatgttcgtctagtttaacgacagattaacaaagtaattctacc 12980803  T
Q  566 caatctctttaccta 580  Q
    ||||||||| |||||    
T  12980804 caatctcttgaccta 12980818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 364 - 580
Target Start/End: Original strand, 30978321 - 30978539
Alignment:
Q  364 taaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatattaaagataagta 460  Q
    ||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| ||| | || |||||    
T  30978321 taaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattga-gagaagta 30978418  T
Q  461 tgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagattaacaaagtaat 559  Q
    || ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  |||||||  ||||||    
T  30978419 tggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggattaacttagtaat 30978518  T
Q  560 tatacccaatctctttaccta 580  Q
    | ||||||||||||| |||||    
T  30978519 tctacccaatctcttgaccta 30978539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 459 - 580
Target Start/End: Original strand, 7769594 - 7769715
Alignment:
Q  459 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 558  Q
    |||| |||||||||| ||||||| ||| | |||| ||||||||||||||| |  ||||||||||||||| || ||||||||||| | |||||||||||||    
T  7769594 tatggttaagaccttcgaatcctccgatgctcttatatggtaatttgcaccctcaattcaatcaatgttcatttagtttaacgacatattaacaaagtaa 7769693  T
Q  559 ttatacccaatctctttaccta 580  Q
    || ||| |||||| || |||||    
T  7769694 ttctactcaatcttttgaccta 7769715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 466 - 579
Target Start/End: Original strand, 12983592 - 12983704
Alignment:
Q  466 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 565  Q
    |||||||| ||||||| ||||||||| |||||  ||| || || |||| |||||||||||||  ||||||||||||| ||||||||||||||||| ||||    
T  12983592 aagaccttcgaatcctccgaagttctcctatgaaaatctgtaccccta-ttcaatcaatgttcgtctagtttaacgacagattaacaaagtaattctacc 12983690  T
Q  566 caatctctttacct 579  Q
    ||||||||| ||||    
T  12983691 caatctcttgacct 12983704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 450
Target Start/End: Original strand, 11183962 - 11184033
Alignment:
Q  381 ccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 450  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||| |||| ||||    
T  11183962 ccctaggcagttgagttgatttttgtaacataaacgtaataaaaacaataaaagttggtttttagaaaatta 11184033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 33678939 - 33679025
Alignment:
Q  252 aatgatagagatttggcaagtgaaccaaaa---ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctact 335  Q
    ||||||| | |||||||||||| |||||||   ||||||||||||||   || ||| ||| ||||||||||||||||||||||||||    
T  33678939 aatgataaatatttggcaagtgtaccaaaaaaactatcgaagtagtactaaagttcatatccacgaggaccgttgttaatttctact 33679025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 508 - 558
Target Start/End: Complemental strand, 15540579 - 15540529
Alignment:
Q  508 ctcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 558  Q
    ||||||||| |||||||| |||||||||| ||||| |||||||||||||||    
T  15540579 ctcctaatttaatcaatgattatctagttcaacgacagattaacaaagtaa 15540529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 11411127 - 11411039
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| | ||| |||||| ||||||| ||||||||||| |||  || ||||||| |||||| ||| ||||||||||||||| |||||    
T  11411127 tgatagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgagtaccattgttaatttctacttagcaa 11411039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 32090777 - 32090663
Alignment:
Q  147 acacaacaacaaaaagggaaaatcaatcggggtttcaattctcattctattgcatgccaattt-------ctaattgctaattccaatttccttttatta 239  Q
    ||||| ||||||||||||||||||| |  ||||||||||| |  |||||||||||| ||||||       |||||||| ||||| | || ||||||  ||    
T  32090777 acacaccaacaaaaagggaaaatcagttagggtttcaatttttgttctattgcatgtcaatttccttatcctaattgcaaattcaagttcccttttgcta 32090678  T
Q  240 taattagaacctaat 254  Q
    |||||||||||||||    
T  32090677 taattagaacctaat 32090663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 12747173 - 12747086
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| ||||| |||||| ||||||| |||||||||||||||  || ||||||| ||| ||||| ||| | ||||||||||| ||||    
T  12747173 tgatagatatttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggactgtt-tcaatttctactcggcaa 12747086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 34502688 - 34502636
Alignment:
Q  267 gcaagtgaaccaaaactatcgaagtagt-aaataaattcgtattcacgaggac 318  Q
    ||||||| || ||||||||||||||||| |||||| ||||||| |||||||||    
T  34502688 gcaagtgtactaaaactatcgaagtagtaaaataagttcgtatccacgaggac 34502636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 203; Significance: 1e-110; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 262 - 580
Target Start/End: Original strand, 647211 - 647530
Alignment:
Q  262 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaaaaaggat 360  Q
    |||||||||||| ||||||| |||||||||||||||  || || |||| ||||||||||||||||||||||||||| ||||       ||||||||||||    
T  647211 atttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaaggat 647310  T
Q  361 gtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagta 460  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  647311 gtataaatttatattgattgccctaggcatttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattagagagaagta 647410  T
Q  461 tgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaatt 560  Q
    || |||||| ||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  647411 tggttaagatcttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagtaatt 647510  T
Q  561 atacccaatctctttaccta 580  Q
     ||||||||||||| |||||    
T  647511 ctacccaatctcttgaccta 647530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 262 - 580
Target Start/End: Original strand, 650483 - 650802
Alignment:
Q  262 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaaaaaggat 360  Q
    |||||||||||| ||||||| |||||||||||||||  || || |||| ||||||||||||||||||||||||||| ||||       ||||||||||||    
T  650483 atttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctatatcaaaaaggat 650582  T
Q  361 gtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagta 460  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||| |||||    
T  650583 gtataaatttatattgattgccctaggcatttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcataatattagagagaagta 650682  T
Q  461 tgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaatt 560  Q
    || |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  650683 tggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagtaatt 650782  T
Q  561 atacccaatctctttaccta 580  Q
     ||||||||||||| |||||    
T  650783 ctacccaatctcttgaccta 650802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 26062690 - 26063020
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggacc--gttgttaatttctactcagcaannnnnnnatc 351  Q
    ||||| |||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||  |||||||| ||||||||| |||       |||    
T  26062690 tgataaagatttggcaagtgaaccaaaactatcgaaataataaataaattcgtatccacgaggaccccgttgttaacttctactcaacaatttctttatc 26062789  T
Q  352 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatt 449  Q
    ||||||||||||| || ||  |  | |||||||||| |||||  ||| |  |||||| ||||||| |   ||||||||||||||| | ||| |||| |||    
T  26062790 aaaaaggatgtattaaattcaa--ggttgccctaggtagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaatt 26062887  T
Q  450 aaagataa--gtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 547  Q
    | ||| |   ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  26062888 agagagagatgtatggttaagacctttgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctagttcaacgacagat 26062987  T
Q  548 taacaaagtaattatacccaatctctttaccta 580  Q
    ||||||||||| | ||||||||||||| |||||    
T  26062988 taacaaagtaactctacccaatctcttgaccta 26063020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 2542128 - 2541803
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||| ||||||  | ||||||||| ||||||| ||||||| ||||||||| ||  |||| ||||||| |||||       || |    
T  2542128 tgatagatatttggcaagtgtaccaaagtcaatcgaagtaataaataa-ttcgtatccacgaggactgtatttaacttctactgagcaatttcattatta 2542030  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttt--tgtaacataaacgtaaataaaacaataaaagtt-ggttttaagaatatt 449  Q
    |||||||||||| || ||  || |  |||||||||||||||||||  ||  ||||||||||||| |   ||||||||||||  | ||||||  ||| |||    
T  2542029 aaaaggatgtattaaattcaatgg--tgccctaggcagttgagtttattcttgtaacataaacggattaaaaacaataaaatataggttttttgaaaatt 2541932  T
Q  450 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatta 549  Q
    |||||   ||||| |||||||||| |||||||  ||||||||  |||||||||||| ||||||| ||||| ||||| |||||||||| ||||| ||||||    
T  2541931 aaagag--gtatggttaagaccttcgaatcctctgaagttctcttatggtaatttgtactcctatttcaagcaatgattatctagttaaacgacagatta 2541834  T
Q  550 acaaagtaattatacccaatctctttaccta 580  Q
    ||||||||||| || |||||||||| |||||    
T  2541833 acaaagtaattttatccaatctcttgaccta 2541803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 464 - 580
Target Start/End: Complemental strand, 26060622 - 26060506
Alignment:
Q  464 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattata 563  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||| ||  ||||||||||||||||||| | ||    
T  26060622 ttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagcttcccgatagattaacaaagtaactcta 26060523  T
Q  564 cccaatctctttaccta 580  Q
    ||||||||||| |||||    
T  26060522 cccaatctcttgaccta 26060506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 12172218 - 12171901
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| ||  |||| | ||||||||| ||  |||| ||||||| |||||       || |    
T  12172218 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaagatcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 12172119  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttggttttaagaatatta 450  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||  ||           
T  12172118 aaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagatttggtttctag------- 12172027  T
Q  451 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatta 549  Q
         ||||||| ||||| |||| ||||| | ||||| ||  |||||||||||||||||||| ||| ||||||||| |||| |||||| ||||  |||||    
T  12172026 -----aagtatggttaagtccttggaatcttccgaagctcgcctatggtaatttgcactcctaaatacaatcaatgattatttagtttcacgacggatta 12171932  T
Q  550 acaaagtaattatacccaatctctttaccta 580  Q
    ||  ||||||| ||||||||||||| |||||    
T  12171931 acttagtaattctacccaatctcttgaccta 12171901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 252 - 341
Target Start/End: Complemental strand, 15851539 - 15851450
Alignment:
Q  252 aatgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| |||||||||||||| |||||||||||||||||| ||   || ||||||| |||||||||||||||||||||||||| |||||    
T  15851539 aatgataaagatttggcaagtgtaccaaaactatcgaagtaatagtaaagttcgtatccacgaggaccgttgttaatttctacttagcaa 15851450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 19929242 - 19929155
Alignment:
Q  254 tgatagagatttggcaagtgaaccaa-aactatcgaagtagtaaataaat-tcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||| ||||| |||| | |||||||||||||||||||||||||| |||||    
T  19929242 tgatagatatttggcaagtgtaccaataactatcgaagtagtaa-taaatatcgt-tccacgaggaccgttgttaatttctacttagcaa 19929155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 21217350 - 21217418
Alignment:
Q  269 aagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 337  Q
    ||||| || ||||||||| ||||| |||  |||||||||||||||||||||||| ||||||||||||||    
T  21217350 aagtgtactaaaactatcaaagtaataataaaattcgtattcacgaggaccgttattaatttctactca 21217418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 254 - 341
Target Start/End: Original strand, 33400075 - 33400163
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||  || ||||||| |||||| |||||||||||||||| || |||||    
T  33400075 tgatagatatttggcaagtgtaccaaaagctatcgaggtagtaataaagttcgtatccacgagaaccgttgttaatttctgcttagcaa 33400163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 379 - 441
Target Start/End: Original strand, 11649329 - 11649393
Alignment:
Q  379 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggtttta 441  Q
    ||||||||||||||||||||  |||||||| ||||||| ||  ||||||||||||||||||||||    
T  11649329 tgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaagttggtttta 11649393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 52629036 - 52628956
Alignment:
Q  129 aaattcacacatgtaagaacacaacaacaaaaagggaaaatcaatcggggtttcaattctcattctattgcatgccaatttc 210  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||   || ||||||| ||||||| |||||||| |||||||    
T  52629036 aaatccacacatgtaacaacacaataacaaaaagggaaaatcaactaggttttcaatcctcattc-attgcatgtcaatttc 52628956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 516
Target Start/End: Original strand, 11649444 - 11649496
Alignment:
Q  464 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt 516  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||| |||||    
T  11649444 ttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcataatt 11649496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 31979341 - 31979285
Alignment:
Q  146 aacacaacaacaaaaagggaaaatcaatcggggtttcaattctcattctattgcatg 202  Q
    ||||||||||||||||||  ||||||||  ||||||||||| |||||||||||||||    
T  31979341 aacacaacaacaaaaaggttaaatcaattagggtttcaattatcattctattgcatg 31979285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 31980692 - 31980626
Alignment:
Q  53 tttcattaaaatctaattttctcacactaatcacaatactcgttaatctcacttaaagattttaagc 119  Q
    ||||||||||| |||||||||||| |||||||||||||| | || ||||||| |||| |||| ||||    
T  31980692 tttcattaaaacctaattttctcatactaatcacaatacacattgatctcacataaatatttcaagc 31980626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 441
Target Start/End: Complemental strand, 26060732 - 26060668
Alignment:
Q  379 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggtttta 441  Q
    |||||||||||| |||||||  |||||||| ||||| | ||  ||||||||||||||||||||||    
T  26060732 tgccctaggcaggtgagttgatttttgtaatataaatgaaataaaaacaataaaagttggtttta 26060668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 158; Significance: 9e-84; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 23673345 - 23673671
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||       |||||    
T  23673345 tgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcaacaatttctttatcaa 23673444  T
Q  354 aaaggatgtataaatttatattgattgccctaggcagttgagttgt--tttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 451  Q
    ||||||||||| || ||  |  | ||||||||||||||||  |||   ||||||| ||||||| |   ||||||||||||||| | ||| |||| ||||     
T  23673445 aaaggatgtattaaattcaa--ggttgccctaggcagttggattggcatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattag 23673542  T
Q  452 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 551  Q
    ||| | ||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  23673543 agagatgtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctagtttaacgacaaattaac 23673642  T
Q  552 aaagtaattatacccaatctctttaccta 580  Q
    ||||||||| ||||||||||||| |||||    
T  23673643 aaagtaattctacccaatctcttgaccta 23673671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 253 - 580
Target Start/End: Complemental strand, 36327172 - 36326845
Alignment:
Q  253 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||       ||||    
T  36327172 atgatagatatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactctgcaatttctttatca 36327073  T
Q  353 aaaaggatgtat-aaatttatattgattgccctaggcagtt-gagttgt-tttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatt 449  Q
    |||| ||||||| ||||| | | |   ||||||||| |||| || | || ||||||| ||||||| |   ||||||||||||||| | ||| |||| |||    
T  36327072 aaaaagatgtattaaattcaaagt---tgccctaggaagttagattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaatt 36326976  T
Q  450 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatta 549  Q
    | ||| | ||||| |||||||||||||||||| |||||||||  |||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  36326975 agagagatgtatggttaagacctttgaatcctccgaagttctcatatggtaatttgcactcctaattcaagcaatgattatctaatttaacgatagatta 36326876  T
Q  550 acaaagtaattatacccaatctctttaccta 580  Q
    ||||||||||| ||||||||||||| |||||    
T  36326875 acaaagtaattctacccaatctcttgaccta 36326845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 252 - 580
Target Start/End: Complemental strand, 16295145 - 16294817
Alignment:
Q  252 aatgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatc 351  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  ||  || ||||||||||||||||||||||||||||||||       |||    
T  16295145 aatgatagagatttggcaagtgaaccaaaactatcgaagtaataaataagatcaaatccacgaggaccgttgttaatttctactcagcaatttcgttatc 16295046  T
Q  352 aaaaaggatgtat-aaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaagttggttttaagaatat 448  Q
      ||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| |||||||  |   ||||| ||||||  || ||||| |||| ||    
T  16295045 -gaaaggatgtataaaatttatattga-tgccctaggcagttgagttgattttgtatcataaaccgattaaaaacaaataaagattagttttcagaaaat 16294948  T
Q  449 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 548  Q
    |  ||| ||||||| ||||| |||| ||||||| ||||||||| ||||||||||||||||||||| || |||||||| |||| |||||| |||| |||||    
T  16294947 t-gagagaagtatggttaagtccttcgaatcctccgaagttctcctatggtaatttgcactcctagtttaatcaatgattatttagtttcacgacagatt 16294849  T
Q  549 aacaaagtaattatacccaatctctttaccta 580  Q
    |||  ||||||| ||||||||||||| |||||    
T  16294848 aacttagtaattctacccaatctcttgaccta 16294817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 32575685 - 32576013
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    ||||||| |||||||||||||||||| ||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| | |       || |     
T  32575685 tgatagatatttggcaagtgaaccaacactattgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcaacgatttcgttataat 32575784  T
Q  354 aaaggatgtataaatttatattgattgccctaggcagttgagttgttttg-taacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 452  Q
    ||| ||||||| || ||  |||| || |||||||||||||  |||||||  |||  |||||||||||||||||||||||||||||||||||||||||| |    
T  32575785 aaatgatgtattaaattcaattg-ttaccctaggcagttggattgtttttataaagtaaacgtaaataaaacaataaaagttggttttaagaatattaga 32575883  T
Q  453 gata--agtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaa 550  Q
    || |  |||||| |||||||||| ||||||| ||||| ||| ||||| ||||||||||||||| |||||  |||| |||| |||||| |||| |||||||    
T  32575884 gaaagaagtatggttaagaccttcgaatcctccgaagctctcctatgataatttgcactcctagttcaaaaaatgattatttagtttcacgacagattaa 32575983  T
Q  551 caaagtaattatacccaatctctttaccta 580  Q
    |  ||||| | |||| |||| ||| |||||    
T  32575984 cttagtaactctaccaaatcccttgaccta 32576013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 31528635 - 31528307
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| ||||| || | ||||||||| ||  |||| ||||||| |||||       || |    
T  31528635 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaatttgtttccacgaggactgtatttaacttctacttagcaatttcattatta 31528537  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttgg-ttttaagaatatt 449  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||| ||||||||| |||    
T  31528536 aaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt 31528438  T
Q  450 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 548  Q
      ||| ||||||| ||||| |||| |||||||   ||| ||| || ||||||||||||||||| ||| | ||||||| |||| |||||| |||| |||||    
T  31528437 -gagagaagtatggttaagtccttcgaatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagatt 31528339  T
Q  549 aacaaagtaattatacccaatctctttaccta 580  Q
    |||  ||||||| ||||||||||||| |||||    
T  31528338 aacttagtaattctacccaatctcttgaccta 31528307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 352 - 530
Target Start/End: Complemental strand, 40018126 - 40017948
Alignment:
Q  352 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 450  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| |   |||||||||| ||   | |||||||| | |     
T  40018126 aaaaaggatgtataaaatttatattgat-gccctaggcagttgagttgatttgtaacataaacggattaaaaacaataagagactggtttaagaaaaatt 40018028  T
Q  451 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttat 530  Q
     ||| ||||||| |||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||||| ||||| ||||    
T  40018027 gagagaagtatggttaagaccttcgaatcctccgaaactctcctatggtaatttgcactcctaattcaaccaatgattat 40017948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 254 - 574
Target Start/End: Complemental strand, 13710315 - 13709995
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||||||||||  | ||||||||| ||||  ||||||| || ||||| || ||  |||| ||||||| |||||       || |    
T  13710315 tgatagatatttggcaagtgaaccaaattcaatcgaagtaataaa--aattcgtttttacgagaactgtatttaacttctacttagcaatttcattatta 13710218  T
Q  353 aaaaggatgtataaa-tttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatatta 450  Q
    ||||||||||||||| ||||||||||| |||  ||| ||||||||||  |||||||||||||| |   ||||||||||||| ||||||||| ||| |||     
T  13710217 aaaaggatgtataaaatttatattgat-gcctgaggaagttgagttgagttgtaacataaacggattaaaaacaataaaagattggtttta-gaaaattt 13710120  T
Q  451 aagataagtatgattaagacctttgaatcctacgaa-gttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatta 549  Q
     ||| ||||||| ||||||||||  |||| |  ||| | ||| ||||| |||||||||||||||||| |  ||||| |||||||||| ||| | ||||||    
T  13710119 gagagaagtatggttaagaccttcaaatcatctgaaagctctcctatgataatttgcactcctaatttaggcaatgattatctagttcaacaacagatta 13710020  T
Q  550 acaaagtaattatacccaatctctt 574  Q
    ||||||||||| ||||| |||||||    
T  13710019 acaaagtaattctacccgatctctt 13709995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 352 - 580
Target Start/End: Complemental strand, 31626698 - 31626468
Alignment:
Q  352 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaag-ttggttttaagaata 447  Q
    ||||||||||| |||| ||||||||| | ||||||||||||||||||| |||||||||||||| | || |||||  |||||| | ||||||||| ||| |    
T  31626698 aaaaaggatgtgtaaaatttatattggt-gccctaggcagttgagttgattttgtaacataaaaggaattaaaaataataaaggattggtttta-gaaaa 31626601  T
Q  448 ttaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 547  Q
    |   ||| ||| ||| ||||| | || ||||||| ||||| ||| ||||||||||||||||||||||||||||||||  |||| |||||| |||| ||||    
T  31626600 tctgagagaagaatggttaagtcattcgaatcctccgaagctctcctatggtaatttgcactcctaattcaatcaattattatttagtttcacgacagat 31626501  T
Q  548 taacaaagtaattatacccaatctctttaccta 580  Q
    ||||  ||||||| ||||||||||||| |||||    
T  31626500 taacttagtaattctacccaatctcttgaccta 31626468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 254 - 341
Target Start/End: Original strand, 24384925 - 24385014
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaa--taaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||  ||||||||||||||||| ||| ||| |||||||||||| |||||    
T  24384925 tgatagatatttggcaagtgtaccaaaactatcgaagtaataaaattaaattcgtattcacgatgactgttattaatttctacttagcaa 24385014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 29436088 - 29436025
Alignment:
Q  278 aaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||||||||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  29436088 aaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 29436025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 38315809 - 38315876
Alignment:
Q  262 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatt 329  Q
    |||||| ||||| | ||||||||||||||||||||  || ||||||| ||||||||||||||||||||    
T  38315809 atttggtaagtgtatcaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatt 38315876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 40927966 - 40927916
Alignment:
Q  146 aacacaacaacaaaaagggaaaatcaatcggggtttcaattctcattctat 196  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  40927966 aacacaaaaacaaaaagggaaaatcaattagggtttcaattctcattctat 40927916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 27409395 - 27409451
Alignment:
Q  146 aacacaacaacaaaaagggaaaatcaatcggggtttcaattctcattctattgcatg 202  Q
    ||||||||||||||||||  ||||||||  ||||||||||| |||||||||||||||    
T  27409395 aacacaacaacaaaaaggttaaatcaattagggtttcaattatcattctattgcatg 27409451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 1503204 - 1503256
Alignment:
Q  267 gcaagtgaaccaaaactatcgaagtagtaaa-taaattcgtattcacgaggac 318  Q
    ||||||| || ||||||||||||||| |||| ||||||||||| |||||||||    
T  1503204 gcaagtgtactaaaactatcgaagtaataaaataaattcgtatccacgaggac 1503256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 1506408 - 1506460
Alignment:
Q  267 gcaagtgaaccaaaactatcgaagtagtaaa-taaattcgtattcacgaggac 318  Q
    ||||||| || ||||||||||||||| |||| ||||||||||| |||||||||    
T  1506408 gcaagtgtactaaaactatcgaagtaataaaataaattcgtatccacgaggac 1506460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 580
Target Start/End: Complemental strand, 8427259 - 8427144
Alignment:
Q  464 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattata 563  Q
    ||||||| || ||||| | ||| |||||| | ||||||||||||| |||  |||||||||||| | ||||||||||| | ||||||| ||| |  || ||    
T  8427259 ttaagacattcgaatcatccgatgttcttatttggtaatttgcacccctg-ttcaatcaatgtctttctagtttaacaacagattaataaaatggttcta 8427161  T
Q  564 cccaatctctttaccta 580  Q
    | ||||||||| |||||    
T  8427160 ctcaatctcttgaccta 8427144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 13572070 - 13572118
Alignment:
Q  282 ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaattt 330  Q
    |||||||||||||||  || |||||||  ||||||||||||||||||||    
T  13572070 ctatcgaagtagtaataaagttcgtatctacgaggaccgttgttaattt 13572118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 4e-61; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 254 - 580
Target Start/End: Complemental strand, 13979730 - 13979405
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| || ||||||||| | ||||||||||||||||||||       ||| |    
T  13979730 tgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaaatcgaatccacgaggactgctgttaatttctactcagcaatttctttatcga 13979631  T
Q  354 aaaggatgtataaatttatat-tgattgccctaggcagttgagttgttttg--taacataaacgtaaataaaacaataaaagttggttttaagaatatta 450  Q
    || |||||||| ||   |||| || |||||| |||||||||  ||| |||   |||  ||||||||||||||||||||||||||||||||||||||||||    
T  13979630 aa-ggatgtattaa---atatctggttgcccaaggcagttggattggttttaataaagtaaacgtaaataaaacaataaaagttggttttaagaatatta 13979535  T
Q  451 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaa 550  Q
     ||| ||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||| | ||||| ||||| |||| |||||| | || |||||||    
T  13979534 gagagaagtatggttaagacctttgaatcctccgaagctctcctatggtaatttgcactccaagttcaaacaatgattatttagtttcatgacagattaa 13979435  T
Q  551 caaagtaattatacccaatctctttaccta 580  Q
    |  ||||| | || |||||| ||| |||||    
T  13979434 cttagtaactctatccaatcccttgaccta 13979405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 39563510 - 39563837
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||||||||||  | ||| ||||| |||| |||||||| | ||||||||| ||  |||| ||||||| |||||       || |    
T  39563510 tgatagatatttggcaagtgaaccaaattcaatcaaagtaataaa-aaattcgtttccacgaggactgta-ttaacttctacttagcaatttcattataa 39563607  T
Q  353 aaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaa-taaaag-ttggttttaagaatat 448  Q
    |||||||||| |||| |||||||| | |||||||||||||||||||| |||||||||||||||  || |||||  | |||||| ||||||||| ||| ||    
T  39563608 aaaaggatgtgtaaaatttatatt-agtgccctaggcagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttta-gaaaat 39563705  T
Q  449 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 548  Q
       ||| ||| ||| ||||| |||| ||||||| ||| | ||| ||||| ||||||||||||||||||||||||||| |||| |||||| |||| |||||    
T  39563706 ctgagagaagaatggttaagtccttcgaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatggttatttagtttcacgacagatt 39563805  T
Q  549 aacaaagtaattatacccaatctctttaccta 580  Q
    |||  ||||||| ||||||||||||| |||||    
T  39563806 aacttagtaattctacccaatctcttgaccta 39563837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 464 - 579
Target Start/End: Complemental strand, 46731529 - 46731414
Alignment:
Q  464 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattata 563  Q
    |||||||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||||| ||||| | ||||||||||||| | ||    
T  46731529 ttaagaccttcgaatcctccgaagttctcatatggtaatttgcactcctaattcaatcaatgattatctagttcaacgacatattaacaaagtaactcta 46731430  T
Q  564 cccaatctctttacct 579  Q
    ||||||||||| ||||    
T  46731429 cccaatctcttgacct 46731414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 22626312 - 22626638
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| || ||||| | ||||||||| ||  |||| ||||||| |||||       || |    
T  22626312 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aagttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 22626410  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttggttttaagaatatta 450  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||| ||| |||| |||     
T  22626411 aaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggattt-agaaaatt- 22626507  T
Q  451 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatta 549  Q
     ||| ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  |||||    
T  22626508 gagagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggatta 22626607  T
Q  550 acaaagtaattatacccaatctctttaccta 580  Q
    ||  ||||||| || |||||||||| |||||    
T  22626608 acttagtaattctatccaatctcttgaccta 22626638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 35091823 - 35091912
Alignment:
Q  165 aaaatcaatcggggtttcaattctcattctattgcatgccaatttctaattgctaattccaatttccttttattataattagaacctaat 254  Q
    |||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  35091823 aaaatcaattagggtttcagttctcattctattgcatgtcaatttctaattgctaattccagttcccttttattataattagaacctaat 35091912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 254 - 364
Target Start/End: Complemental strand, 46731699 - 46731589
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    ||||||||||||||||||||||| ||||||||||||||| | |||||||| |||| |||||||||||||||||| |||||||||||||       |||||    
T  46731699 tgatagagatttggcaagtgaacaaaaactatcgaagtaatgaataaatttgtatccacgaggaccgttgttaacttctactcagcaatttctttatcaa 46731600  T
Q  354 aaaggatgtat 364  Q
    |||||||||||    
T  46731599 aaaggatgtat 46731589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 35091672 - 35091783
Alignment:
Q  53 tttcattaaaatctaattttctcacactaatcacaatactcgttaatctcacttaaagattttaagc-tagttgatcaaattcacacatgtaagaacaca 151  Q
    |||||||||||  ||||||||||| |||||||||||||| | ||||||| || ||||| |||| ||| || |||||||||||||||||||||||||||||    
T  35091672 tttcattaaaacttaattttctcatactaatcacaatacccattaatctaacataaagtttttgagcctaattgatcaaattcacacatgtaagaacaca 35091771  T
Q  152 acaacaaaaagg 163  Q
    ||||||||||||    
T  35091772 acaacaaaaagg 35091783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 11138570 - 11138896
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| || ||||| | ||||||||| ||  |||| ||||||| |||||       || |    
T  11138570 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aagttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 11138668  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaata-aaagttggttttaagaatatta 450  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||  |   ||||||||| | | ||||  || |||| |||     
T  11138669 aaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaatatagaattgg-attcagaaaatt- 11138765  T
Q  451 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatta 549  Q
     ||| ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  |||||    
T  11138766 gagagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggatta 11138865  T
Q  550 acaaagtaattatacccaatctctttaccta 580  Q
    ||  ||||||| || |||||||||| |||||    
T  11138866 acttagtaattctatccaatctcttgaccta 11138896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 459 - 580
Target Start/End: Complemental strand, 47412222 - 47412101
Alignment:
Q  459 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 558  Q
    |||||||||||||||||||||||   | ||||||||| |||||||||||| |  ||||||||||||||| ||||| |||||| | |||||||||   |||    
T  47412222 tatgattaagacctttgaatcctctaatgttcttctacggtaatttgcacccacaattcaatcaatgttcatctaatttaacaacagattaacacgataa 47412123  T
Q  559 ttatacccaatctctttaccta 580  Q
    || ||| ||||||||| |||||    
T  47412122 ttctactcaatctcttgaccta 47412101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 341
Target Start/End: Complemental strand, 27055237 - 27055149
Alignment:
Q  253 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    |||||| | ||||||||||   ||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  27055237 atgataaatatttggcaagcataccaaaactatcgaagtagtaataaatttcgtatccacgaggaccgttgttaatttctacttagcaa 27055149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 19869343 - 19869255
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| |||||||||||| || |||| ||||| |||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  19869343 tgatagatatttggcaagtgtactaaaatctatcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 19869255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 337
Target Start/End: Original strand, 26822039 - 26822122
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 337  Q
    |||||||  ||||| ||||| |||||||||||||||||| |||  |||||||||| ||| ||||||| ||||||||| ||||||    
T  26822039 tgatagacttttggaaagtgtaccaaaactatcgaagtaataataaaattcgtatccacaaggaccgctgttaatttttactca 26822122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 379 - 450
Target Start/End: Complemental strand, 50096902 - 50096829
Alignment:
Q  379 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 450  Q
    ||||||| ||||||||||||  |||||||||||||||||||  |||||| |||||||||||||| |||| ||||    
T  50096902 tgccctaagcagttgagttgatttttgtaacataaacgtaataaaaacagtaaaagttggtttttagaaaatta 50096829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 487 - 580
Target Start/End: Complemental strand, 35366387 - 35366295
Alignment:
Q  487 gttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 580  Q
    ||||||||| |||||||||||| || ||||||||||||||| || || |||||||| | ||||||||  ||||| ||| ||||||||| |||||    
T  35366387 gttcttctacggtaatttgcacccc-aattcaatcaatgttcatataatttaacgacaaattaacaagataattctactcaatctcttgaccta 35366295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 25492263 - 25492175
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| | ||| |||||| ||||||| ||||| || ||||||  || ||||||| |||||||| ||||||||||||||||| |||||    
T  25492263 tgatagataattgacaagtgtaccaaaagctatcaaaatagtaataaagttcgtatccacgaggatcgttgttaatttctacttagcaa 25492175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 439
Target Start/End: Original strand, 20536459 - 20536520
Alignment:
Q  379 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttt 439  Q
    ||||||||||||||| ||||  || ||||||| |||||||| |||||||||||||||||||||    
T  20536459 tgccctaggcagttgggttgacttgtgtaacacaaacgtaa-taaaacaataaaagttggttt 20536520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 3306213 - 3306147
Alignment:
Q  254 tgatagagatttggcaagtgaaccaa-aactatcgaagtagtaaa-taaattcgtattcacgaggac 318  Q
    ||||||| |||||||||||| ||||| ||||||||||||| |||| ||| ||||||| |||||||||    
T  3306213 tgatagatatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggac 3306147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 30157797 - 30157863
Alignment:
Q  254 tgatagagatttggcaagtgaaccaa-aactatcgaagtagtaaa-taaattcgtattcacgaggac 318  Q
    ||||||| |||||||||||| ||||| ||||||||||||| |||| ||| ||||||| |||||||||    
T  30157797 tgatagaaatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggac 30157863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 32366877 - 32366927
Alignment:
Q  248 acctaatgatagagatttggcaagtgaaccaaa-actatcgaagtagtaaa 297  Q
    |||||||||||||  ||||||||||| |||||| |||||||||||||||||    
T  32366877 acctaatgatagaattttggcaagtgtaccaaatactatcgaagtagtaaa 32366927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 4225619 - 4225659
Alignment:
Q  256 atagagatttggcaagtgaaccaaaactatcgaagtagtaa 296  Q
    ||||| |||||||||||| ||||| ||||||||||||||||    
T  4225619 atagatatttggcaagtgtaccaatactatcgaagtagtaa 4225659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 18883561 - 18883509
Alignment:
Q  267 gcaagtgaaccaaaactatcgaagtagtaaa-taaattcgtattcacgaggac 318  Q
    ||||||| || ||||||||| |||||||||| ||| |||||||||||||||||    
T  18883561 gcaagtgtactaaaactatcaaagtagtaaaataagttcgtattcacgaggac 18883509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 262 - 574
Target Start/End: Original strand, 12575308 - 12575620
Alignment:
Q  262 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaaaaaggat 360  Q
    |||||||||||| ||||||  | ||||||||| ||||||| ||||||| ||||||||| |||||||| ||||||||| |||       || |||||||||    
T  12575308 atttggcaagtgtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggactgttgttaacttctactcaacaagttcattattaaaaaggat 12575406  T
Q  361 gtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataa 457  Q
    |||| || ||  || |  ||||||||||||||||||||  ||||||||||||||   |   ||||||||||||| |||||||| |||| |||| ||| ||    
T  12575407 gtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaattgattaaaaacaataaaagattggtttt-agaaaattagagagaa 12575503  T
Q  458 gtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagta 557  Q
    ||||| |||||||| ||||||||| ||||||| |  |||||||||||||||||||||||||| ||||| | |||||||||||||| ||||||||||||||    
T  12575504 gtatggttaagaccattgaatcctccgaagttttcttatggtaatttgcactcctaattcaagcaatgataatctagtttaacgacagattaacaaagta 12575603  T
Q  558 attatacccaatctctt 574  Q
    ||| |||| ||||||||    
T  12575604 attctacctaatctctt 12575620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 254 - 519
Target Start/End: Complemental strand, 14418707 - 14418445
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||| | | ||| |||||       |||||    
T  14418707 tgatagatttttggcaagtgaaccaaagctatcgaagtagtaaataa-ttcgt-tccacgaggaccgttgttaactacaacttagcaatttctttatcaa 14418610  T
Q  354 aaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaag 453  Q
    ||||||| | | || ||  || | ||||||||||||||||||||| ||| ||||||||||  |   ||||||||||||||||||||||||||||||| ||    
T  14418609 aaaggatatgttaaattcaatgg-ttgccctaggcagttgagttggtttttaacataaacaaattaaaaacaataaaagttggttttaagaatattagag 14418511  T
Q  454 ataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaa 519  Q
    | ||||||| ||||||| || ||||||| |||| |||| ||||| |||||||||||||||||||||    
T  14418510 agaagtatggttaagacattcgaatcctccgaatttctcctatgataatttgcactcctaattcaa 14418445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 379 - 580
Target Start/End: Original strand, 41778866 - 41779068
Alignment:
Q  379 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttga 476  Q
    |||||||||||||||| |||  |||||||||||||||| |   ||||||||||||| | | |||| ||| |||||||| ||||||| ||||||||||  |    
T  41778866 tgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattgattta-gaagattaaagagaagtatggttaagaccttcaa 41778964  T
Q  477 atcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttta 576  Q
    ||| | ||||||||| ||||| |||||||||||  |||||||| ||||| |||||||| || |||| ||||||||| | ||| | ||||||||||||| |    
T  41778965 atcttccgaagttctcctatgctaatttgcactagtaattcaaacaatgattatctaggttcacgacagattaacacaataactctacccaatctcttga 41779064  T
Q  577 ccta 580  Q
    ||||    
T  41779065 ccta 41779068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 574
Target Start/End: Complemental strand, 13097099 - 13096946
Alignment:
Q  420 aaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattca 518  Q
    ||||||||||||| || |||||| ||| |||| ||| ||||||| |||||||||| ||||||| ||||||| | ||||| |||||||||||||||||| |    
T  13097099 aaaacaataaaagattagtttta-gaaaattagagagaagtatggttaagaccttcgaatcctccgaagttatcctatg-taatttgcactcctaattta 13097002  T
Q  519 atcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 574  Q
    | ||||| |||||||||| || || ||||||||||||||||| |||||||||||||    
T  13097001 agcaatgattatctagttcaatgaaagattaacaaagtaattctacccaatctctt 13096946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 254 - 341
Target Start/End: Original strand, 39659712 - 39659799
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||  || ||||||| |||||||||| ||||||||||||||| |||||    
T  39659712 tgatagatatttggcaagtgtaccgaaactatcgaagtagtaataaagttcgtatccacgaggaccattgttaatttctacttagcaa 39659799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 9467429 - 9467341
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||| || |||||    
T  9467429 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttcttcttagcaa 9467341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 453951 - 453863
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| ||||| |||||| ||||||| |||| |||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  453951 tgatagatatttgacaagtgtaccaaaaactatggaagtactaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 453863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 379 - 441
Target Start/End: Original strand, 41836318 - 41836382
Alignment:
Q  379 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggtttta 441  Q
    ||||||||||||||||||||  |||||||| ||||||| ||  ||||||||||||||||||||||    
T  41836318 tgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaagttggtttta 41836382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 516
Target Start/End: Original strand, 41836433 - 41836485
Alignment:
Q  464 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt 516  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||| |||||    
T  41836433 ttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcataatt 41836485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 549
Target Start/End: Complemental strand, 44008335 - 44008245
Alignment:
Q  459 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatta 549  Q
    |||| ||| |||||| ||||||| ||||| ||  || ||||||| |||||||||| ||||| ||||| |||| |||||| |||||||||||    
T  44008335 tatggttatgaccttcgaatcctccgaagctcgcctttggtaatctgcactcctagttcaaacaatgattatttagtttcacgatagatta 44008245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 13332429 - 13332365
Alignment:
Q  277 caaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||||||||||||||||  || || |||| || |||||||||||||||||| |||| |||||    
T  13332429 caaaactatcgaagtagtaataaagtttgtatccatgaggaccgttgttaatttatacttagcaa 13332365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 297
Target Start/End: Original strand, 22173710 - 22173744
Alignment:
Q  263 tttggcaagtgaaccaaaactatcgaagtagtaaa 297  Q
    ||||||||||| |||||||||||||||||||||||    
T  22173710 tttggcaagtgtaccaaaactatcgaagtagtaaa 22173744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 254 - 519
Target Start/End: Original strand, 11 - 273
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||| | | ||| |||||       |||||    
T  11 tgatagatttttggcaagtgaaccaaagctatcgaagtagtaaataa-ttcgt-tccacgaggaccgttgttaactacaacttagcaatttctttatcaa 108  T
Q  354 aaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaag 453  Q
    ||||||| | | || ||  || | ||||||||||||||||||||| ||| ||||||||||  |   ||||||||||||||||||||||||||||||| ||    
T  109 aaaggatatgttaaattcaatgg-ttgccctaggcagttgagttggtttttaacataaacaaattaaaaacaataaaagttggttttaagaatattagag 207  T
Q  454 ataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaa 519  Q
    | ||||||| ||||||| || ||||||| |||| |||| ||||| |||||||||||||||||||||    
T  208 agaagtatggttaagacattcgaatcctccgaatttctcctatgataatttgcactcctaattcaa 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 352 - 580
Target Start/End: Complemental strand, 10010 - 9781
Alignment:
Q  352 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatatt 449  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| |||| |||    
T  10010 aaaaaggatgtataaatttatattggtc-ccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaataattggtttttagaaaatt 9912  T
Q  450 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 548  Q
     | || ||||||| ||||| |||| ||||||| ||||| ||| |||||| ||||||||||||| ||| ||||||||| |||| |||||| ||||  ||||    
T  9911 ga-gagaagtatggttaagtccttcgaatcctccgaagctctcctatggcaatttgcactcctaaatacaatcaatgattatttagtttcacgacggatt 9813  T
Q  549 aacaaagtaattatacccaatctctttaccta 580  Q
    |||  ||||||| ||||||||||||| |||||    
T  9812 aacttagtaattctacccaatctcttgaccta 9781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 2619 - 2930
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatcaa 353  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||  |||||| |||||||||||||||||| |||||||||||||       |||||    
T  2619 tgatggagatttggcaagtggaccaaaactatcgaagtaataaataagatcgtatccacgaggaccgttgttaacttctactcagcaatttcgttatcaa 2718  T
Q  354 aaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 451  Q
    || |||||||| || ||  |||| |||||| ||| |||||  |||  ||||||||||| |||| |   ||||| |||||| || |                   
T  2719 aa-ggatgtattaaattcaattg-ttgcccaaggaagttggattggtttttgtaacatgaacggattaaaaactataaaaatttg--------------- 2801  T
Q  452 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 551  Q
    ||| ||||||  |||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||| |||| |||||| |||| |||||||     
T  2802 agagaagtatcgttaagacctttgaatcctccgaagctctcctatggtaatttgcactcctagttcaatcaatgattatatagtttcacgaaagattaag 2901  T
Q  552 aaagtaattatacccaatctctttaccta 580  Q
      ||||||| |||| |||||||| |||||    
T  2902 gtagtaattctaccaaatctcttgaccta 2930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 254 - 580
Target Start/End: Original strand, 24185 - 24510
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnatca 352  Q
    ||||||| |||||||||||| ||||||| ||||||||||||| |||||||| || | ||||||||| ||  |||| ||||||||| |||       || |    
T  24185 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagt-aataaatttgtttccacgaggactgtatttaacttctactcaacaatttcattatta 24283  T
Q  353 aaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttggttttaagaatatta 450  Q
    |||||||||||||||||  |||||  |||||||||||||||||||| ||| |||  ||||||  |   ||||||||||| | |||||||| |||| |||     
T  24284 aaaaggatgtataaattattattg-gtgccctaggcagttgagttgatttagta--ataaactgattaaaaacaataaagaattggtttttagaaaatt- 24379  T
Q  451 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatta 549  Q
     ||| ||| ||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||||| ||| |||| |||| |||| |||| | ||||  |||||    
T  24380 gagagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcctaaatacaataaatgattatttagtatcacgacggatta 24479  T
Q  550 acaaagtaattatacccaatctctttaccta 580  Q
    ||  ||||||| ||||||||||||| |||||    
T  24480 acttagtaattctacccaatctcttgaccta 24510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 442 - 574
Target Start/End: Original strand, 5999 - 6131
Alignment:
Q  442 agaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacg 541  Q
    |||| |||| ||| ||||||| |||||||||| ||||||| ||| ||||| ||||||||||||||||| ||||||||| ||||| |||||||| || |||    
T  5999 agaaaattagagagaagtatggttaagaccttcgaatcctccgaggttctcctatggtaatttgcactactaattcaaacaatgattatctaggttcacg 6098  T
Q  542 atagattaacaaagtaattatacccaatctctt 574  Q
    | ||||||||| | ||| | |||||||||||||    
T  6099 acagattaacacaataactctacccaatctctt 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 254 - 341
Target Start/End: Original strand, 33730 - 33817
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||| |||||||||||| ||||||||||||||||||||||  || || |||| |||||||||||||||||||||||||| |||||    
T  33730 tgatagatatttggcaagtgtaccaaaactatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaa 33817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 341
Target Start/End: Original strand, 19517 - 19596
Alignment:
Q  262 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    |||||||||||| ||||||||| || |||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  19517 atttggcaagtgtaccaaaactgtcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 19596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 493 - 574
Target Start/End: Original strand, 7232 - 7313
Alignment:
Q  493 ctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 574  Q
    ||||||||||||| ||||||||||||||||||| |||| |||||| |||| ||||||||  ||||||| ||  |||||||||    
T  7232 ctatggtaatttgtactcctaattcaatcaatgattatttagtttcacgacagattaacttagtaattctattcaatctctt 7313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 493 - 551
Target Start/End: Complemental strand, 2699 - 2641
Alignment:
Q  493 ctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 551  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||| |||| ||||||||    
T  2699 ctatggtaacttgcactcctaattcaatcaatgattatttagtttcacgacagattaac 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 3739 - 3664
Alignment:
Q  263 tttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 341  Q
    ||||||||||| |||||  ||||||||||| ||||   ||| |||| |||||||||||||||||| |||||||||||||    
T  3739 tttggcaagtgtaccaattctatcgaagtaataaa---atttgtatccacgaggaccgttgttaacttctactcagcaa 3664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 297
Target Start/End: Complemental strand, 19636 - 19593
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaa 297  Q
    |||||||  ||||||||||| |||||||||||||||||||||||    
T  19636 tgatagatttttggcaagtgtaccaaaactatcgaagtagtaaa 19593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 297
Target Start/End: Complemental strand, 29715 - 29672
Alignment:
Q  254 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaa 297  Q
    |||||||  ||||||||||| |||||||||||||||||||||||    
T  29715 tgatagatttttggcaagtgtaccaaaactatcgaagtagtaaa 29672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 297
Target Start/End: Original strand, 14094 - 14128
Alignment:
Q  263 tttggcaagtgaaccaaaactatcgaagtagtaaa 297  Q
    ||||||||||| |||||||||||||||||||||||    
T  14094 tttggcaagtgtaccaaaactatcgaagtagtaaa 14128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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