View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11029_high_35 (Length: 227)
Name: NF11029_high_35
Description: NF11029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11029_high_35 |
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Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 25827266 - 25827462
Alignment:
| Q |
17 |
acttttggtcatggttgtccaacaactgtgtaactactttcataatttgaagttgtacttttcaatgctcattgtgaagttctaattaaggttggacaac |
116 |
Q |
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| T |
25827266 |
acttttggtcatggttgtccaacaactgtgtaactactttcataatttgaagttgtacttttcaatgctcattgtgaagttctaattaaggttggacaa- |
25827364 |
T |
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| Q |
117 |
aggtgaattctaaggtaagactaagaaataggaactgtaggcaaactgaagatagtcgataattgctttacatattgctataaaatccctcctatgct |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
25827365 |
aggtgaattctaaggtaagactaagaaataggaactgtaggcaaactgaagatagtcgataattgctttacatattgctataaaatccctccaatgct |
25827462 |
T |
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