View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11029_high_41 (Length: 204)
Name: NF11029_high_41
Description: NF11029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11029_high_41 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 21483140 - 21483327
Alignment:
| Q |
1 |
ccagttcgctggatttgcatgagacccaccagcagcaacattggtgcaattatcaccactacctaatctcgcaagtggatcagaacctggaatattctga |
100 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
21483140 |
ccagttcgctggatttgcatgagaaccaccagcagcaacattggtgcaactatcaccactacctaatctcgcaagtggatcagaaccttgaatattctga |
21483239 |
T |
|
| Q |
101 |
tgatggttattattatgatgcctatgatgagacataaaccgccgttgccgagccatcctcttctttctagcttcttttgtagcagaag |
188 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21483240 |
tgatggttaatattatgatgcctatgatgagacataaaccgccgttgccgagccatcctcttctttctagcttcttttgtagcagaag |
21483327 |
T |
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