View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11029_high_5 (Length: 460)

Name: NF11029_high_5
Description: NF11029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11029_high_5
NF11029_high_5
[»] chr3 (3 HSPs)
chr3 (1-443)||(35518861-35519303)
chr3 (369-431)||(21285645-21285707)
chr3 (342-430)||(38823535-38823623)
[»] chr6 (5 HSPs)
chr6 (1-443)||(33766795-33767239)
chr6 (342-430)||(4500335-4500423)
chr6 (342-430)||(15823887-15823975)
chr6 (342-430)||(34309881-34309969)
chr6 (368-441)||(34066971-34067044)
[»] chr8 (2 HSPs)
chr8 (19-443)||(12477155-12477582)
chr8 (375-416)||(4169055-4169096)
[»] scaffold0024 (1 HSPs)
scaffold0024 (344-441)||(12736-12833)
[»] scaffold1049 (1 HSPs)
scaffold1049 (342-430)||(2345-2433)
[»] chr7 (3 HSPs)
chr7 (342-430)||(26085229-26085317)
chr7 (342-430)||(26109016-26109104)
chr7 (366-443)||(3003578-3003655)
[»] chr5 (5 HSPs)
chr5 (342-430)||(550818-550906)
chr5 (342-430)||(30281230-30281318)
chr5 (378-431)||(20324059-20324112)
chr5 (403-439)||(23903412-23903448)
chr5 (375-443)||(41218918-41218986)
[»] chr2 (1 HSPs)
chr2 (366-443)||(23680851-23680928)
[»] chr1 (5 HSPs)
chr1 (374-439)||(23969960-23970025)
chr1 (366-443)||(37738814-37738891)
chr1 (364-427)||(32612457-32612520)
chr1 (378-429)||(6096176-6096227)
chr1 (293-430)||(17883652-17883789)


Alignment Details
Target: chr3 (Bit Score: 411; Significance: 0; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 1 - 443
Target Start/End: Original strand, 35518861 - 35519303
Alignment:
Q  1 aagatgtgagaggggaagaaaaaggaatctgactttcatagaaaataacatttcttgacaagaaaaaggcattggaatggatatcatagagaagatatcc 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35518861 aagatgtgagaggggaagaaaaaggaaactgactttcatagaaaataacatttcttgacaagaaaaaggcactggaatggatatcatagagaagatatcc 35518960  T
Q  101 tttggttccctttctatatccaagaaagacagattttctagcacaaggatggaatttagtacggttttgttggatagtggaagcaaaagctaagcaacca 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35518961 tttggttccttttctatatccaagaaagacagattttctagcacgaggatagaatttagtacggttttgttggatagtggaagcaaaagctaagcaacca 35519060  T
Q  201 aagacccgtaggtgaagagtagttggttgtttatggagtaattcatatgggcttttattgtgcaagataggagaaggaatgtgatttataatatgcactg 300  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35519061 aagacccgtaggtgaagagtagctggctgtttatggagtaattcatatgggcttttattgtgcaagataggagaaggaatgcgatttataatatgcactg 35519160  T
Q  301 catgctgcacagaaaaaggccaaaaagaaataggaatttttgattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaat 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35519161 catgctgcacagaaaaaggccaaaaagaaataggaatttttgattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaat 35519260  T
Q  401 gccattttgttgaggggtttcaacacaagatcaatgatgaata 443  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35519261 gccattttgttgaggggtttcaacacaagatcaatgatgaata 35519303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 431
Target Start/End: Original strand, 21285645 - 21285707
Alignment:
Q  369 ttaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaagat 431  Q
    |||||||| | ||||||||| |  |||||||| |||||||||| ||| |||||||||||||||    
T  21285645 ttaaggatatattgatgttttctttcaacaatcccattttgtttaggtgtttcaacacaagat 21285707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 430
Target Start/End: Complemental strand, 38823623 - 38823535
Alignment:
Q  342 gattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaaga 430  Q
    |||||||| ||||| ||||  |||||||| |  || ||||||||||| || |||||| | |||||||| || |||||||| ||||||||    
T  38823623 gattgaaaagaaagtgctctagcaacatttaaaatatgttgatgttttcgttcaacagtaccattttgctgcggggtttccacacaaga 38823535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 356; Significance: 0; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 1 - 443
Target Start/End: Complemental strand, 33767239 - 33766795
Alignment:
Q  1 aagatgtgagaggggaagaaaaaggaatctgactttcatagaaaataacatttcttgacaagaaaaaggcattggaatggatatcatagagaagatatcc 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33767239 aagatgtgagaggggaagaaaaaggaaactgactttcatagaaaataacatttcttgacaagaaaaaggcattggaatggatatcatagagaagatatcc 33767140  T
Q  101 tttggttccctttctatatccaagaaagacagattttctagcacaaggatggaatttagtacggttttgttggatagtggaagcaaaagctaagcaacca 200  Q
    ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  33767139 tttggttccttctctatatccaagaaagacagattttctagcacgaggatggaatttagaacggttttgttggatagtggaagcaaaagctaagcaagca 33767040  T
Q  201 aagacccgtaggt---gaagagtagttggttgtttatggagtaattcatatgggcttttattgtgcaagataggagaaggaatgtgatttataatatgca 297  Q
    |||||||||||||   |||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  33767039 aagacccgtaggtggagaagtgtaggtggctgtttatggagttattcatatgggctttaattgtgcaagagaggagaaggaatgcgatttataatatgca 33766940  T
Q  298 ctgcatgctgcacagaaaaaggccaaaaagaaataggaatttttgattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaac 397  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33766939 ctgcatgctgtacagaaaaatgcc-aaaagaaataggaatttttgattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaac 33766841  T
Q  398 aatgccattttgttgaggggtttcaacacaagatcaatgatgaata 443  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  33766840 aatgccattttgttgagggatttcaacacaagatcgatgatgaata 33766795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 430
Target Start/End: Complemental strand, 4500423 - 4500335
Alignment:
Q  342 gattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaaga 430  Q
    ||||||||||| |||||||| || ||||||||||| |||||||| ||||  || ||||| |||||||||||||| || |||||||||||    
T  4500423 gattgaaaggagagggctcgagccacattaaggatatgttgatgcttcctttctacaataccattttgttgaggagtctcaacacaaga 4500335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 430
Target Start/End: Complemental strand, 15823975 - 15823887
Alignment:
Q  342 gattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaaga 430  Q
    ||||||||||| |||||||| || ||||||||||| |||||||| ||||  || ||||| |||||||||||||| || |||||||||||    
T  15823975 gattgaaaggagagggctcgagccacattaaggatatgttgatgcttcctttctacaataccattttgttgaggagtctcaacacaaga 15823887  T

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Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 430
Target Start/End: Complemental strand, 34309969 - 34309881
Alignment:
Q  342 gattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaaga 430  Q
    ||||||||||| |||||||| || ||||| ||||| |||||||| ||||  || ||||| |||||||||||||| || |||||||||||    
T  34309969 gattgaaaggagagggctcgagccacattgaggatatgttgatgcttcctttctacaataccattttgttgaggagtctcaacacaaga 34309881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 34067044 - 34066971
Alignment:
Q  368 attaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaagatcaatgatgaa 441  Q
    |||||| || ||||| ||||| | ||||||  | |||||||||||||| || ||||||||||||| ||||||||    
T  34067044 attaagaatatgttggtgttttctctcaaccctaccattttgttgaggtgtctcaacacaagatctatgatgaa 34066971  T

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Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 19 - 443
Target Start/End: Original strand, 12477155 - 12477582
Alignment:
Q  19 aaaaaggaatctgactttcatagaaaataacatttcttgacaagaaaaaggcattggaatggatatcatagagaagatatcctttggttccctttctata 118  Q
    ||||||||| || |||||| | |||||| |||||||||||||||||||||| |||||||||||||||||||  |||||||| ||||||||| | ||||||    
T  12477155 aaaaaggaaacttactttcttcgaaaattacatttcttgacaagaaaaaggaattggaatggatatcataggaaagatatcatttggttccttctctata 12477254  T
Q  119 tccaagaaagacagattttctagcacaaggatggaatttagtacggttttgttggatagtggaagcaaaagctaagcaaccaaagacccgtaggtg---a 215  Q
    ||||||||||||| |||||||||||| ||  ||||| |||| |||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||   |    
T  12477255 tccaagaaagacatattttctagcacgagcgtggaagttagaacggttgtgttggatagtagaagcaaaatctaagcaaccaaagacctgtaggtggaga 12477354  T
Q  216 agagtagttggttgtttatggagtaattcatatgggcttttattgtgcaagataggagaaggaatgtgatttataatatgcactgcatgctgcacagaaa 315  Q
    ||||||| ||||||||||||||||||||| || |||| ||||||||| |||| ||||||||||||  ||||||||||||||||||||| ||||| |||||    
T  12477355 agagtaggtggttgtttatggagtaattcgtaagggcatttattgtgaaagagaggagaaggaatacgatttataatatgcactgcatactgcatagaaa 12477454  T
Q  316 aaggccaaaaagaaataggaatttttgattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgagg 415  Q
    || ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |    
T  12477455 aatgccaaaaaggaataggaatgttttattgaaaggaaagggctcgggcaacattaaggatttgttgatgtatccgctcaacaatgccattttgttgaag 12477554  T
Q  416 ggtttcaacacaagatcaatgatgaata 443  Q
    ||||||||||||||||| || |||||||    
T  12477555 ggtttcaacacaagatcgattatgaata 12477582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 416
Target Start/End: Original strand, 4169055 - 4169096
Alignment:
Q  375 atgtgttgatgtttccgctcaacaatgccattttgttgaggg 416  Q
    ||||||||||||||||  ||||||||| ||||||||||||||    
T  4169055 atgtgttgatgtttcctttcaacaatgtcattttgttgaggg 4169096  T

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Target: scaffold0024 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 441
Target Start/End: Complemental strand, 12833 - 12736
Alignment:
Q  344 ttgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaagatcaatgatgaa 441  Q
    |||||| ||||||| ||  ||||||||||| |||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||  |||||||    
T  12833 ttgaaaagaaagggatctagcaacattaagaatgtgttgatgtttcctctcaacaattccattttgttgaggggattcaacacaagatctttgatgaa 12736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1049 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1049
Description:

Target: scaffold1049; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 430
Target Start/End: Original strand, 2345 - 2433
Alignment:
Q  342 gattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaaga 430  Q
    ||||||||||| |||||||| || ||||||||||| |||||||| ||||  || ||||| |||||||||||||| || |||||||||||    
T  2345 gattgaaaggagagggctcgagccacattaaggatatgttgatgcttcctttctacaataccattttgttgaggagtctcaacacaaga 2433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 430
Target Start/End: Original strand, 26085229 - 26085317
Alignment:
Q  342 gattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaaga 430  Q
    ||||||||||| |||||||| || ||||||||||| |||||||| ||||  || ||||| |||||||||||||| || |||||||||||    
T  26085229 gattgaaaggagagggctcgagccacattaaggatatgttgatgcttcctttctacaataccattttgttgaggagtctcaacacaaga 26085317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 430
Target Start/End: Original strand, 26109016 - 26109104
Alignment:
Q  342 gattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaaga 430  Q
    ||||||||||| |||||||| || ||||||||||| |||||||| ||||  || ||||| |||||||||||||| || |||||||||||    
T  26109016 gattgaaaggagagggctcgagccacattaaggatatgttgatgcttcctttctacaataccattttgttgaggagtctcaacacaaga 26109104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 443
Target Start/End: Complemental strand, 3003655 - 3003578
Alignment:
Q  366 acattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaagatcaatgatgaata 443  Q
    ||||||||||| ||||| ||||| |  |||||  || ||||||||||||| |||||||||||||||| ||||||||||    
T  3003655 acattaaggatatgttggtgttttctttcaactctggcattttgttgaggtgtttcaacacaagatctatgatgaata 3003578  T

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Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 430
Target Start/End: Original strand, 550818 - 550906
Alignment:
Q  342 gattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaaga 430  Q
    ||||||||||| |||||||| || ||||||||||| |||||||| ||||  || ||||| |||||||||||||| || |||||||||||    
T  550818 gattgaaaggagagggctcgagccacattaaggatatgttgatgcttcctttctacaataccattttgttgaggagtctcaacacaaga 550906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 430
Target Start/End: Original strand, 30281230 - 30281318
Alignment:
Q  342 gattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaaga 430  Q
    ||||||||||| |||||||| || ||||||||||| |||||||| ||||  || ||||| |||||||||||||| || |||||||||||    
T  30281230 gattgaaaggagagggctcgagccacattaaggatatgttgatgcttcctttctacaataccattttgttgaggagtctcaacacaaga 30281318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 20324059 - 20324112
Alignment:
Q  378 tgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaagat 431  Q
    ||||||||||||| ||||||  | |||||||||||||| |||||||||||||||    
T  20324059 tgttgatgtttcctctcaactctaccattttgttgaggagtttcaacacaagat 20324112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 439
Target Start/End: Original strand, 23903412 - 23903448
Alignment:
Q  403 cattttgttgaggggtttcaacacaagatcaatgatg 439  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  23903412 cattttgttgaggtgtttcaacacaagatctatgatg 23903448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 443
Target Start/End: Original strand, 41218918 - 41218986
Alignment:
Q  375 atgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaagatcaatgatgaata 443  Q
    ||||||||||| ||||  ||||| |  ||||||||||| |||||||||||||||| |  ||||||||||    
T  41218918 atgtgttgatgcttcctttcaaccaccccattttgttggggggtttcaacacaagttttatgatgaata 41218986  T

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Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 443
Target Start/End: Complemental strand, 23680928 - 23680851
Alignment:
Q  366 acattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaagatcaatgatgaata 443  Q
    ||||||||||| ||||||||||| |  |||||  || ||||||||||||| |||||||||||||||| ||||||||||    
T  23680928 acattaaggatatgttgatgttttctttcaactctggcattttgttgaggtgtttcaacacaagatctatgatgaata 23680851  T

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Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 439
Target Start/End: Complemental strand, 23970025 - 23969960
Alignment:
Q  374 gatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaagatcaatgatg 439  Q
    |||||||||||| |||| |||||||||  ||||||||||||||||| ||| |||||||||||||||    
T  23970025 gatgtgttgatgattcctctcaacaatctcattttgttgaggggttacaaaacaagatcaatgatg 23969960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 443
Target Start/End: Original strand, 37738814 - 37738891
Alignment:
Q  366 acattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaagatcaatgatgaata 443  Q
    ||||||||||| ||||| ||||| |  |||||  || ||||||||||||| |||||||||||||||| ||||||||||    
T  37738814 acattaaggatatgttggtgttttctttcaactctggcattttgttgaggtgtttcaacacaagatctatgatgaata 37738891  T

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Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 32612457 - 32612520
Alignment:
Q  364 caacattaaggatgtgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacaca 427  Q
    |||||||||| || || |||||||||| ||||||  |||||||||||||||| |||||||||||    
T  32612457 caacattaagaatatgctgatgtttcctctcaactctgccattttgttgaggagtttcaacaca 32612520  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 429
Target Start/End: Complemental strand, 6096227 - 6096176
Alignment:
Q  378 tgttgatgtttccgctcaacaatgccattttgttgaggggtttcaacacaag 429  Q
    ||||||||||| ||||||||| | |||||||||||||| || ||||||||||    
T  6096227 tgttgatgtttgcgctcaacagtaccattttgttgaggagtctcaacacaag 6096176  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 430
Target Start/End: Original strand, 17883652 - 17883789
Alignment:
Q  293 atgcactgcatgctgcacagaaaaaggccaaaaagaaataggaatttttgattgaaaggaaagggctcgggcaacattaaggatgtgttgatgtttccgc 392  Q
    |||||| |||||||| | || ||||  ||||||||   ||||||  || |||||||| ||||| ||||  |||||||| |  || ||||||||||| ||     
T  17883652 atgcacagcatgctgaatagcaaaattccaaaaagttttaggaagattagattgaaaagaaagtgctctagcaacatttaaaatatgttgatgttttcgt 17883751  T
Q  393 tcaacaatgccattttgttgaggggtttcaacacaaga 430  Q
    |||||| | |||||||| || |||||||| ||||||||    
T  17883752 tcaacagtaccattttgctgcggggtttccacacaaga 17883789  T

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