View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11029_high_6 (Length: 441)

Name: NF11029_high_6
Description: NF11029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11029_high_6
NF11029_high_6
[»] chr7 (55 HSPs)
chr7 (18-432)||(34362122-34362534)
chr7 (216-347)||(5657537-5657669)
chr7 (215-324)||(8861257-8861366)
chr7 (217-324)||(6546493-6546600)
chr7 (217-324)||(12165726-12165833)
chr7 (218-347)||(21991611-21991741)
chr7 (218-347)||(41765134-41765264)
chr7 (219-324)||(33688342-33688446)
chr7 (218-347)||(26524383-26524513)
chr7 (220-347)||(25691600-25691729)
chr7 (243-347)||(29173540-29173645)
chr7 (217-344)||(4582893-4583021)
chr7 (260-324)||(26980340-26980404)
chr7 (217-324)||(15612839-15612945)
chr7 (218-347)||(32821109-32821239)
chr7 (239-347)||(22687235-22687344)
chr7 (219-324)||(48928643-48928748)
chr7 (220-324)||(27421459-27421563)
chr7 (218-347)||(7334769-7334899)
chr7 (219-347)||(24211717-24211846)
chr7 (218-345)||(30055501-30055630)
chr7 (216-324)||(10359294-10359402)
chr7 (220-324)||(23111167-23111271)
chr7 (218-347)||(18797304-18797432)
chr7 (217-347)||(27283718-27283849)
chr7 (217-347)||(37346996-37347127)
chr7 (218-324)||(9355906-9356012)
chr7 (215-347)||(11071177-11071311)
chr7 (218-324)||(12390710-12390816)
chr7 (218-324)||(43686016-43686121)
chr7 (239-324)||(48928376-48928461)
chr7 (215-314)||(37704140-37704239)
chr7 (217-324)||(37109846-37109953)
chr7 (218-324)||(17842666-17842772)
chr7 (218-347)||(32432432-32432557)
chr7 (364-404)||(7334859-7334899)
chr7 (218-324)||(31520803-31520909)
chr7 (218-308)||(31579165-31579255)
chr7 (364-404)||(11071271-11071311)
chr7 (364-404)||(29173605-29173645)
chr7 (364-404)||(32821109-32821149)
chr7 (260-312)||(35353125-35353177)
chr7 (364-404)||(38053551-38053591)
chr7 (220-282)||(8299192-8299254)
chr7 (364-402)||(30055592-30055630)
chr7 (220-313)||(44413470-44413564)
chr7 (219-347)||(38258521-38258650)
chr7 (218-255)||(40381940-40381977)
chr7 (364-404)||(5657537-5657577)
chr7 (218-324)||(10481578-10481686)
chr7 (364-404)||(18797392-18797432)
chr7 (364-404)||(37347087-37347127)
chr7 (260-347)||(38053503-38053591)
chr7 (364-404)||(38258610-38258650)
chr7 (356-404)||(43925159-43925207)
[»] chr2 (50 HSPs)
chr2 (110-217)||(17332972-17333079)
chr2 (220-347)||(33660441-33660569)
chr2 (218-324)||(4264174-4264280)
chr2 (220-347)||(36641988-36642116)
chr2 (219-324)||(13711465-13711570)
chr2 (216-347)||(33551059-33551191)
chr2 (218-347)||(19424701-19424831)
chr2 (218-347)||(2325443-2325573)
chr2 (216-324)||(19313850-19313958)
chr2 (220-347)||(41463923-41464051)
chr2 (220-324)||(43770936-43771039)
chr2 (218-344)||(4166922-4167049)
chr2 (18-85)||(17333120-17333187)
chr2 (218-303)||(18494386-18494471)
chr2 (260-347)||(4478411-4478499)
chr2 (217-332)||(26357576-26357692)
chr2 (218-345)||(31570809-31570937)
chr2 (260-324)||(27350035-27350099)
chr2 (217-292)||(41465508-41465583)
chr2 (220-347)||(3176941-3177069)
chr2 (217-347)||(4763627-4763761)
chr2 (260-347)||(33709305-33709393)
chr2 (218-347)||(29242211-29242341)
chr2 (218-347)||(39167436-39167566)
chr2 (260-324)||(44285991-44286055)
chr2 (217-347)||(37905708-37905838)
chr2 (278-324)||(5881599-5881645)
chr2 (218-347)||(11366454-11366584)
chr2 (260-347)||(43648318-43648406)
chr2 (218-324)||(17054193-17054299)
chr2 (218-347)||(17071810-17071940)
chr2 (215-347)||(33902065-33902196)
chr2 (268-347)||(41051278-41051359)
chr2 (221-253)||(58025-58057)
chr2 (364-404)||(2325443-2325483)
chr2 (364-404)||(3177029-3177069)
chr2 (260-347)||(19289396-19289484)
chr2 (217-253)||(31861894-31861930)
chr2 (364-404)||(37905798-37905838)
chr2 (364-404)||(39167436-39167476)
chr2 (217-304)||(44913661-44913747)
chr2 (364-401)||(4167012-4167049)
chr2 (216-313)||(35958907-35959004)
chr2 (371-404)||(41051278-41051311)
chr2 (364-404)||(4478459-4478499)
chr2 (288-347)||(7006994-7007054)
chr2 (364-404)||(19289396-19289436)
chr2 (364-404)||(33660441-33660481)
chr2 (364-404)||(36642076-36642116)
chr2 (364-404)||(41463923-41463963)
[»] chr3 (54 HSPs)
chr3 (216-347)||(4015449-4015581)
chr3 (218-347)||(7327537-7327668)
chr3 (221-324)||(32373466-32373567)
chr3 (217-347)||(37203057-37203188)
chr3 (239-347)||(11357419-11357529)
chr3 (218-324)||(11466815-11466921)
chr3 (218-324)||(21193597-21193703)
chr3 (218-347)||(22450959-22451089)
chr3 (218-324)||(35844317-35844423)
chr3 (217-347)||(37157698-37157828)
chr3 (217-347)||(51213036-51213167)
chr3 (218-347)||(44186556-44186686)
chr3 (218-347)||(48354932-48355062)
chr3 (218-346)||(39282644-39282772)
chr3 (260-324)||(2007966-2008030)
chr3 (239-346)||(40936003-40936111)
chr3 (218-347)||(52040977-52041108)
chr3 (218-347)||(40552314-40552444)
chr3 (217-347)||(45174493-45174626)
chr3 (228-331)||(29099356-29099460)
chr3 (220-324)||(46297841-46297945)
chr3 (217-324)||(3362242-3362350)
chr3 (218-347)||(3655257-3655387)
chr3 (218-324)||(34132926-34133032)
chr3 (263-347)||(53229207-53229293)
chr3 (215-347)||(20373351-20373484)
chr3 (219-324)||(25579731-25579836)
chr3 (219-315)||(11835699-11835790)
chr3 (364-404)||(48355022-48355062)
chr3 (216-306)||(44891496-44891585)
chr3 (221-324)||(22446144-22446247)
chr3 (218-345)||(26941317-26941445)
chr3 (217-302)||(33698182-33698263)
chr3 (264-347)||(42506130-42506214)
chr3 (215-297)||(1089719-1089800)
chr3 (220-312)||(43975979-43976068)
chr3 (218-347)||(4761704-4761836)
chr3 (364-404)||(3655257-3655297)
chr3 (364-404)||(4761704-4761744)
chr3 (364-404)||(20373351-20373391)
chr3 (216-347)||(27480434-27480566)
chr3 (364-404)||(37203148-37203188)
chr3 (364-404)||(42506130-42506170)
chr3 (260-324)||(47481555-47481619)
chr3 (364-404)||(51213036-51213076)
chr3 (366-404)||(46994716-46994754)
chr3 (366-403)||(39282735-39282772)
chr3 (218-255)||(40640645-40640682)
chr3 (218-255)||(53175714-53175751)
chr3 (260-304)||(2613923-2613967)
chr3 (364-404)||(37157788-37157828)
chr3 (364-404)||(40552314-40552354)
chr3 (218-266)||(45879498-45879546)
chr3 (364-404)||(53176135-53176175)
[»] chr4 (52 HSPs)
chr4 (218-324)||(37287733-37287840)
chr4 (215-347)||(55241185-55241318)
chr4 (220-347)||(34948178-34948306)
chr4 (215-347)||(49375963-49376097)
chr4 (216-347)||(28003067-28003199)
chr4 (217-347)||(7703516-7703647)
chr4 (218-347)||(25701138-25701268)
chr4 (219-324)||(4597994-4598098)
chr4 (215-324)||(39397915-39398024)
chr4 (220-347)||(47253751-47253878)
chr4 (218-347)||(29584281-29584409)
chr4 (218-347)||(30002705-30002835)
chr4 (218-324)||(38011854-38011960)
chr4 (239-347)||(23761093-23761202)
chr4 (220-324)||(27396618-27396722)
chr4 (218-324)||(35021140-35021246)
chr4 (243-312)||(54499356-54499425)
chr4 (220-324)||(17167715-17167819)
chr4 (220-324)||(17173292-17173396)
chr4 (220-324)||(33341397-33341505)
chr4 (218-347)||(25184113-25184243)
chr4 (218-347)||(35025669-35025799)
chr4 (216-347)||(19440729-19440862)
chr4 (215-347)||(36493769-36493902)
chr4 (218-347)||(19089534-19089664)
chr4 (218-323)||(4205116-4205221)
chr4 (218-311)||(34361609-34361702)
chr4 (219-324)||(37775670-37775775)
chr4 (275-347)||(50764787-50764860)
chr4 (218-347)||(37663822-37663950)
chr4 (218-300)||(7152235-7152317)
chr4 (218-347)||(55477972-55478106)
chr4 (220-347)||(5048046-5048174)
chr4 (218-310)||(32579444-32579536)
chr4 (260-324)||(32592135-32592199)
chr4 (218-284)||(17272011-17272077)
chr4 (218-300)||(32912709-32912791)
chr4 (239-347)||(33816614-33816723)
chr4 (218-310)||(4396326-4396418)
chr4 (364-404)||(19440729-19440769)
chr4 (260-324)||(23518408-23518472)
chr4 (364-404)||(29584281-29584321)
chr4 (364-404)||(37663822-37663862)
chr4 (364-404)||(55477972-55478012)
chr4 (218-255)||(38812271-38812308)
chr4 (364-404)||(4934283-4934323)
chr4 (364-404)||(6864125-6864165)
chr4 (364-404)||(19089534-19089574)
chr4 (220-272)||(20097485-20097537)
chr4 (364-404)||(25701138-25701178)
chr4 (364-404)||(49376057-49376097)
chr4 (364-404)||(55241185-55241225)
[»] chr8 (45 HSPs)
chr8 (218-347)||(38643977-38644107)
chr8 (218-347)||(27082899-27083029)
chr8 (217-347)||(5300007-5300138)
chr8 (217-324)||(13307621-13307728)
chr8 (218-324)||(16446960-16447066)
chr8 (220-324)||(465843-465947)
chr8 (216-308)||(33906221-33906313)
chr8 (218-347)||(34894966-34895096)
chr8 (218-324)||(34952116-34952222)
chr8 (218-347)||(36695027-36695157)
chr8 (215-324)||(6098603-6098712)
chr8 (232-347)||(11727037-11727153)
chr8 (224-347)||(37970580-37970704)
chr8 (218-347)||(1204926-1205056)
chr8 (217-347)||(10555263-10555394)
chr8 (217-347)||(12876107-12876238)
chr8 (218-347)||(1150166-1150296)
chr8 (218-347)||(43643656-43643786)
chr8 (216-347)||(23854492-23854624)
chr8 (218-324)||(40862418-40862525)
chr8 (218-347)||(41362517-41362644)
chr8 (218-324)||(9864147-9864253)
chr8 (218-347)||(16222862-16222992)
chr8 (212-282)||(7891075-7891145)
chr8 (208-347)||(44869485-44869626)
chr8 (364-405)||(1205016-1205057)
chr8 (217-282)||(15009240-15009305)
chr8 (218-287)||(24823394-24823463)
chr8 (364-404)||(12876198-12876238)
chr8 (364-404)||(16222952-16222992)
chr8 (218-348)||(30654643-30654774)
chr8 (217-284)||(33197890-33197957)
chr8 (217-255)||(1954108-1954146)
chr8 (219-273)||(35459834-35459888)
chr8 (218-255)||(7998362-7998399)
chr8 (219-347)||(31933947-31934076)
chr8 (218-255)||(39099263-39099300)
chr8 (364-404)||(1149693-1149733)
chr8 (364-404)||(5300007-5300047)
chr8 (364-404)||(7891018-7891058)
chr8 (364-404)||(10555263-10555303)
chr8 (368-404)||(23854492-23854528)
chr8 (364-404)||(36695027-36695067)
chr8 (364-404)||(37970580-37970620)
chr8 (364-404)||(40862509-40862548)
[»] chr1 (63 HSPs)
chr1 (218-347)||(1547283-1547413)
chr1 (215-347)||(3309141-3309273)
chr1 (217-324)||(38823209-38823316)
chr1 (209-324)||(39393370-39393485)
chr1 (218-347)||(16415641-16415772)
chr1 (218-324)||(11742424-11742530)
chr1 (218-324)||(48620633-48620739)
chr1 (229-347)||(47279196-47279315)
chr1 (223-324)||(27533054-27533155)
chr1 (220-347)||(15752027-15752155)
chr1 (218-347)||(2959744-2959874)
chr1 (231-347)||(4330288-4330407)
chr1 (217-324)||(31621627-31621734)
chr1 (218-324)||(3534928-3535034)
chr1 (218-312)||(15168085-15168179)
chr1 (218-347)||(34012427-34012557)
chr1 (219-347)||(10922724-10922853)
chr1 (219-324)||(14758038-14758143)
chr1 (218-342)||(37618949-37619076)
chr1 (218-352)||(32267030-32267165)
chr1 (218-343)||(10182062-10182188)
chr1 (218-347)||(15382929-15383059)
chr1 (218-284)||(22170750-22170816)
chr1 (217-347)||(47682544-47682674)
chr1 (260-324)||(9903128-9903192)
chr1 (260-347)||(32216093-32216181)
chr1 (220-331)||(41926161-41926273)
chr1 (217-304)||(7079168-7079255)
chr1 (218-324)||(21289661-21289774)
chr1 (366-404)||(8222216-8222254)
chr1 (218-347)||(18422647-18422777)
chr1 (216-347)||(27267249-27267378)
chr1 (218-347)||(8222127-8222254)
chr1 (364-404)||(15752115-15752155)
chr1 (364-404)||(25160718-25160758)
chr1 (260-347)||(28564831-28564919)
chr1 (220-347)||(33725650-33725778)
chr1 (260-324)||(40884851-40884915)
chr1 (216-324)||(42721033-42721141)
chr1 (217-347)||(30327002-30327133)
chr1 (371-405)||(1547380-1547414)
chr1 (218-324)||(19899843-19899949)
chr1 (216-347)||(27227535-27227659)
chr1 (218-347)||(30254420-30254549)
chr1 (217-266)||(43579241-43579290)
chr1 (364-404)||(27227535-27227575)
chr1 (364-404)||(28564831-28564871)
chr1 (220-347)||(28769651-28769778)
chr1 (220-332)||(27563970-27564084)
chr1 (215-324)||(46931401-46931513)
chr1 (260-344)||(238566-238650)
chr1 (371-404)||(33725650-33725683)
chr1 (247-347)||(51128884-51128985)
chr1 (364-404)||(7079113-7079153)
chr1 (364-400)||(10182062-10182098)
chr1 (364-404)||(10922813-10922853)
chr1 (364-404)||(18422737-18422777)
chr1 (364-404)||(28769738-28769778)
chr1 (364-404)||(30254509-30254549)
chr1 (364-404)||(30327002-30327042)
chr1 (364-404)||(32216141-32216181)
chr1 (244-324)||(37451308-37451388)
chr1 (364-404)||(47279275-47279315)
[»] chr5 (61 HSPs)
chr5 (218-347)||(8741931-8742062)
chr5 (216-331)||(15724488-15724603)
chr5 (220-324)||(5837557-5837661)
chr5 (220-324)||(25500995-25501099)
chr5 (217-324)||(7693229-7693336)
chr5 (218-324)||(19119859-19119965)
chr5 (218-345)||(39572819-39572947)
chr5 (215-347)||(699147-699280)
chr5 (217-324)||(22019631-22019738)
chr5 (220-324)||(26268076-26268180)
chr5 (218-347)||(27330306-27330434)
chr5 (218-324)||(9200233-9200339)
chr5 (215-324)||(40133382-40133491)
chr5 (216-347)||(23116267-23116399)
chr5 (216-347)||(31786691-31786823)
chr5 (208-324)||(36866752-36866868)
chr5 (218-344)||(36860423-36860550)
chr5 (218-324)||(1429214-1429320)
chr5 (218-347)||(5112358-5112488)
chr5 (218-347)||(30969369-30969499)
chr5 (215-347)||(14409372-14409504)
chr5 (218-347)||(24886102-24886234)
chr5 (219-324)||(32563150-32563255)
chr5 (218-324)||(8466745-8466850)
chr5 (218-347)||(22974127-22974257)
chr5 (230-347)||(33908245-33908363)
chr5 (218-347)||(35826528-35826658)
chr5 (260-324)||(25668692-25668755)
chr5 (218-313)||(13956425-13956520)
chr5 (274-347)||(6824524-6824600)
chr5 (218-347)||(38528282-38528411)
chr5 (218-315)||(12910350-12910447)
chr5 (219-347)||(22980794-22980923)
chr5 (220-347)||(27318532-27318660)
chr5 (260-324)||(28416596-28416660)
chr5 (215-344)||(35511525-35511655)
chr5 (218-304)||(35933902-35933988)
chr5 (258-324)||(42342773-42342839)
chr5 (227-347)||(43308697-43308818)
chr5 (215-347)||(11897999-11898132)
chr5 (216-292)||(16004477-16004554)
chr5 (364-404)||(22255272-22255312)
chr5 (365-404)||(43308697-43308736)
chr5 (222-324)||(8436970-8437072)
chr5 (260-347)||(22255223-22255312)
chr5 (364-404)||(24886194-24886234)
chr5 (364-404)||(27330394-27330434)
chr5 (297-347)||(15992585-15992636)
chr5 (271-347)||(23954834-23954912)
chr5 (366-404)||(30969369-30969407)
chr5 (217-282)||(26317795-26317860)
chr5 (219-324)||(31705680-31705785)
chr5 (371-404)||(33908330-33908363)
chr5 (364-405)||(35826527-35826568)
chr5 (364-404)||(5112358-5112398)
chr5 (364-404)||(5829991-5830031)
chr5 (364-404)||(8741931-8741971)
chr5 (260-347)||(14919573-14919661)
chr5 (364-404)||(27318532-27318572)
chr5 (364-404)||(31786691-31786731)
chr5 (374-402)||(39572919-39572947)
[»] chr6 (20 HSPs)
chr6 (218-324)||(8513233-8513339)
chr6 (220-347)||(6088910-6089038)
chr6 (218-324)||(4318901-4319007)
chr6 (216-324)||(7235112-7235220)
chr6 (237-347)||(15491634-15491745)
chr6 (218-347)||(18498433-18498564)
chr6 (218-324)||(3880017-3880123)
chr6 (220-347)||(30353412-30353540)
chr6 (214-347)||(33618830-33618964)
chr6 (260-324)||(29182205-29182269)
chr6 (217-313)||(33893091-33893187)
chr6 (219-345)||(20768087-20768212)
chr6 (218-345)||(1945833-1945962)
chr6 (371-404)||(33618931-33618964)
chr6 (364-404)||(18498524-18498564)
chr6 (364-404)||(21017166-21017206)
chr6 (218-324)||(5627391-5627497)
chr6 (364-404)||(6091237-6091277)
chr6 (364-404)||(15491705-15491745)
chr6 (215-267)||(24662189-24662241)
[»] scaffold0002 (3 HSPs)
scaffold0002 (218-347)||(134-264)
scaffold0002 (238-324)||(94462-94548)
scaffold0002 (364-404)||(224-264)
[»] scaffold0291 (2 HSPs)
scaffold0291 (220-347)||(7889-8017)
scaffold0291 (364-404)||(7977-8017)
[»] scaffold0009 (2 HSPs)
scaffold0009 (218-309)||(42348-42439)
scaffold0009 (218-282)||(100821-100885)
[»] scaffold0318 (1 HSPs)
scaffold0318 (220-347)||(11908-12039)
[»] scaffold0262 (1 HSPs)
scaffold0262 (215-255)||(12149-12189)
[»] scaffold0061 (2 HSPs)
scaffold0061 (220-347)||(43959-44087)
scaffold0061 (364-404)||(44047-44087)
[»] scaffold0017 (2 HSPs)
scaffold0017 (220-347)||(154700-154828)
scaffold0017 (364-404)||(154700-154740)


Alignment Details
Target: chr7 (Bit Score: 331; Significance: 0; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 18 - 432
Target Start/End: Complemental strand, 34362534 - 34362122
Alignment:
Q  18 attggtgcatggctaactacttgttatttcaatttgacttacttgtgccgtgaacctttgtgaatgctactatttgccttacttgttatttcaatttcca 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34362534 attggtgcatggctaactacttgttatttcaatttgccttacttgtgccgtgaacctttgtgaatgctacaatttgccttacttgttatttcaatttcca 34362435  T
Q  118 tttagccgtgattctcctatttaatttcaattactatctccatttcattactagcactattattgttcagtttcaattcatgctaccgcgttaattcaat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34362434 tttagccgtgattctcctatttaatttcaattactatctccatttcattactagcactattattgttcaatttcaattcatgctaccgcgttaattcaat 34362335  T
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34362334 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgg 34362235  T
Q  318 catcaaagttcagttgtcatagtatcatcaccccacatcaccccactgtacaatggcatcaaaagttcagttctcatagta--------tcatcaggaca 409  Q
    ||||||||||||||| ||||||||||||||||          |||||| ||||||||||||||||||||||||| ||||||        |||||||||||    
T  34362234 catcaaagttcagttctcatagtatcatcacc----------ccactgcacaatggcatcaaaagttcagttcttatagtatcatcaattcatcaggaca 34362145  T
Q  410 atcatgatatcagcaactctctg 432  Q
    |||||||||||||||||||||||    
T  34362144 atcatgatatcagcaactctctg 34362122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 216 - 347
Target Start/End: Complemental strand, 5657669 - 5657537
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||||| | |||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  5657669 atggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagt 5657570  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||| ||||||||||  ||||||||||||||    
T  5657569 ggcatcaaaagttcagtcttcatagtatcatca 5657537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 8861257 - 8861366
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    ||||||||||||||||||||| | ||||||||||||||||| |  |||||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  8861257 aatggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacaccccactgtttgtacag 8861356  T
Q  315 tggcatcaaa 324  Q
    ||||||||||    
T  8861357 tggcatcaaa 8861366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 6546493 - 6546600
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| | || ||||||| ||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||     
T  6546493 tggaaaattctatggtgaagtcataagaatgatttttctagtgaagttaacactatagcatcaaaagtgttgcgagtaacaccccactatttgtacagta 6546592  T
Q  317 gcatcaaa 324  Q
     |||||||    
T  6546593 acatcaaa 6546600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 12165726 - 12165833
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    |||||||||||| |||||| |  | | |||||||||||| |  ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  12165726 tggaaaattctacggtgaagtcgttaaaatgacttttctggtgaagttaacactatagcatccaaagtgttgtgagtaacaccccactgtttgtacagtg 12165825  T
Q  317 gcatcaaa 324  Q
    ||||||||    
T  12165826 gcatcaaa 12165833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 21991611 - 21991741
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||| |||||| | |||||||||| |||| | |  ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||     
T  21991611 ggaaaattctagggtgaagtcatgagaatgatttttatggtgaagttaacactatagcatcaaaattgttgcgagtaacaccccactgtttgtacagtgt 21991710  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||   |||||||||||||    
T  21991711 catcaaaagttcagtccccatagtatcatca 21991741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 41765264 - 41765134
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||| |||||||| | |||||||||||||||||   ||||| || ||||||||||||||||||| ||||| | ||||||||||||||||| ||||    
T  41765264 ggaaaattccatggtgaagtcatgagaatgacttttctgataaagtcaatactatagcatcaaaagtgtagtgagtagcaccccactgtttgtacggtgg 41765165  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||| ||||  ||||||||||||||    
T  41765164 catcaaaagtccagtcctcatagtatcatca 41765134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 33688446 - 33688342
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||| ||||||||| ||||||||||||||||||| || |||||||||||||| ||||||||||||| |||| |||| || ||||||||| |||||||    
T  33688446 gaaaattatatggtgaagttatgagaatgacttttct-ggtaagttaacactataacatcaaaagtgttatgagtaacatcctactgtttgtccagtggc 33688348  T
Q  319 atcaaa 324  Q
    ||||||    
T  33688347 atcaaa 33688342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 26524513 - 26524383
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | ||||||||||||||||| |  | |||||||||||| |||||||| ||||||||  ||||| ||| ||||||| ||||||    
T  26524513 ggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaatgttgtgactaacactccattgtttgtgcagtgg 26524414  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||| ||||  ||||||||||||||    
T  26524413 catcaaaagtccagtcctcatagtatcatca 26524383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 25691729 - 25691600
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaa-caccccactgtttgtacagtggc 318  Q
    |||||| ||||||||| | ||||||||||||||||| |  |||||||||||||| |||||||||| ||||||| ||  ||| ||||||||||||||||||    
T  25691729 aaaattttatggtgaagtcatgagaatgacttttctcgtgaagttaacactataacatcaaaagtattgtgagtaattacctcactgtttgtacagtggc 25691630  T
Q  319 atcaa-agttcagttgtcatagtatcatca 347  Q
    ||||| ||||||||| | ||||||| ||||    
T  25691629 atcaacagttcagttcttatagtattatca 25691600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 29173540 - 29173645
Alignment:
Q  243 gaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagta 341  Q
    ||||||||||||| |  ||||||||||| ||| ||||||||||||||||| ||||| |||||||||||||| || |||| ||||||||||  ||||||||    
T  29173540 gaatgacttttctggtgaagttaacactgtagtatcaaaagtgttgtgagtaacactccactgtttgtacaatgacatcaaaagttcagtcctcatagta 29173639  T
Q  342 tcatca 347  Q
    ||||||    
T  29173640 tcatca 29173645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 344
Target Start/End: Original strand, 4582893 - 4583021
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| | | || |||||||||||| |  ||||||| ||||||| ||||||| ||||||||| ||||||||||| |||||||| ||    
T  4582893 tggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatg 4582992  T
Q  317 gcatc-aaagttcagttgtcatagtatca 344  Q
     |||| ||||||||||   ||||||||||    
T  4582993 acatcaaaagttcagtccccatagtatca 4583021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 26980340 - 26980404
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  26980340 aagttaacattatagcatcaaaagtgttgtgagtaacaccccacggtttgtacagtggcatcaaa 26980404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 324
Target Start/End: Complemental strand, 15612945 - 15612839
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| | |||||||| || ||||| |  |||||||||||||| |||| |||||||| |||| ||||||||| |||||||| ||||    
T  15612945 tggaaaattctatggtgaagtcatgagaataacgtttcttgtgaagttaacactataacatc-aaagtgttatgagtaacaccccagtgtttgtagagtg 15612847  T
Q  317 gcatcaaa 324  Q
    ||||||||    
T  15612846 gcatcaaa 15612839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 32821239 - 32821109
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| ||||| |||| | |  ||||||||| |||| |||||||| ||| ||||| ||||| |||||||||||||| |||    
T  32821239 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatgg 32821140  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  || |||||||||||    
T  32821139 catcaaaagttcagtcctcgtagtatcatca 32821109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 347
Target Start/End: Original strand, 22687235 - 22687344
Alignment:
Q  239 atgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcat 337  Q
    |||||||||||||||||    |||||||||||||| |||||||| ||||||||| ||||| ||||||||||| |||||| ||| ||||||||||   |||    
T  22687235 atgagaatgacttttctgatgaagttaacactataacatcaaaaatgttgtgagtaacactccactgtttgtgcagtggtatcaaaagttcagtccccat 22687334  T
Q  338 agtatcatca 347  Q
    ||||||||||    
T  22687335 agtatcatca 22687344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 48928748 - 48928643
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||| ||||||||| | ||||||||||||||||| |  |||| ||||||||| |||||||||||| ||||| | ||||||||| ||||||| ||| |    
T  48928748 gaaaattttatggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgcc 48928649  T
Q  319 atcaaa 324  Q
    ||||||    
T  48928648 atcaaa 48928643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 27421563 - 27421459
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| |  ||| ||||| |||| | |  |||||||||||||| |||||||||||||||||| ||||| |||||||||||||| || ||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtttgtacaatgaca 27421464  T
Q  320 tcaaa 324  Q
    |||||    
T  27421463 tcaaa 27421459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 7334769 - 7334899
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||| |||||| |  |||||||||||||| |    |||||||||||||| ||| |||  |||  |||| |||||||||||||||||||| ||     
T  7334769 ggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaatatgtaatgagtaacaccccactgtttgtacaatga 7334868  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||| ||||||||||||||    
T  7334869 catcaaaagttcagttctcatagtatcatca 7334899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 347
Target Start/End: Original strand, 24211717 - 24211846
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||||||||||||| | || |||||||||||| | |  |||||||||||||| |||||||| |||  |||| ||||||| ||||||| || | ||||    
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctactgtttatagaatggc 24211816  T
Q  319 atc-aaagttcagttgtcatagtatcatca 347  Q
    ||| |||||||||   ||||||||||||||    
T  24211817 atcaaaagttcagccctcatagtatcatca 24211846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 345
Target Start/End: Original strand, 30055501 - 30055630
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctagga-aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    |||||||||||||||||| | || |||||||||||| | |   ||||||||||||||  ||||||| |||  |||| |||||||||||||||||||| ||    
T  30055501 ggaaaattctatggtgaagtcataagaatgactttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtacaatg 30055600  T
Q  317 gcatc-aaagttcagttgtcatagtatcat 345  Q
     |||| ||||||||||  ||||||||||||    
T  30055601 acatcaaaagttcagtcctcatagtatcat 30055630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 324
Target Start/End: Complemental strand, 10359402 - 10359294
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||||| | |||| |||||||||||| | ||| ||||   ||||||||||||||||| ||||| |||| || ||| ||| ||||||    
T  10359402 atggaaaattctatggtgaagtcatgataatgacttttctggtaaaattaatcttatagcatcaaaagtgtagtgagtaacatcctactatttatacagt 10359303  T
Q  316 ggcatcaaa 324  Q
    | |||||||    
T  10359302 gacatcaaa 10359294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 23111167 - 23111271
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||| ||||||| | |||| ||||| |||||| |  |||||||||||||| |||||||| | ||||||| ||||| ||||| |||||||| |||||    
T  23111167 aaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaacacaccactatttgtacaatggca 23111266  T
Q  320 tcaaa 324  Q
    |||||    
T  23111267 tcaaa 23111271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 18797304 - 18797432
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | ||||||||||||||| | |  ||||||||||  || ||| |||| |||  |||| |||||||||||||||||||| ||     
T  18797304 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacac--taacataaaaaatgtaatgagtaacaccccactgtttgtacaatga 18797401  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| |||||||| |  ||||||||||||||    
T  18797402 catcaaaagttcaatcctcatagtatcatca 18797432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 347
Target Start/End: Original strand, 27283718 - 27283849
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| |||| | ||||| |||| | |  |||||||||||||| |||||||| |||  |||| |||||||||| ||||||||| ||    
T  27283718 tggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccaccgtttgtacaatg 27283817  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
      ||| ||||||||||  ||||||||| ||||    
T  27283818 aaatcaaaagttcagtcctcatagtattatca 27283849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 347
Target Start/End: Original strand, 37346996 - 37347127
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||| ||||||||| | |||| ||||| |||| | |  ||||||| |||||| |||||||| | |  |||| ||||||||| |||||||||||||    
T  37346996 tggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacaccccattgtttgtacagtg 37347095  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
     |||| ||||||||||  ||||||||||||||    
T  37347096 acatcaaaagttcagtcctcatagtatcatca 37347127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 9356012 - 9355906
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| ||||||||| | |||||||||||  || | |  || ||||||||||||||| |||| ||| ||||| || ||||||||||||||||||||     
T  9356012 ggaaaattttatggtgaagtcatgagaatgaccattttggtgaatttaacactatagcataaaaaatgtagtgagcaataccccactgtttgtacagtga 9355913  T
Q  318 catcaaa 324  Q
    |||||||    
T  9355912 catcaaa 9355906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 11071177 - 11071311
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctagg-aaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtaca 313  Q
    |||| |||||||||||||||| | |||| ||||  |||| | || |||||||  |||||| |||||||| | | | ||| ||||| ||||||||||||||    
T  11071177 aatgcaaaattctatggtgaagtcatgaaaatgtatttttttggtaaagttagtactatatcatcaaaaatatagcgagtaacactccactgtttgtaca 11071276  T
Q  314 gtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||| |||| ||||||||||| ||||||||||||||    
T  11071277 gtgacatcaaaagttcagttctcatagtatcatca 11071311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 12390816 - 12390710
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | || |||  ||||||| | |  |||||||||||||| ||||||||||||  |||| |||| |||||||||||| |||||     
T  12390816 ggaaaattctatggtgaagtcatcagatcgacttttttggtgaagttaacactataacatcaaaagtgtaatgagtaacatcccactgtttgtgcagtga 12390717  T
Q  318 catcaaa 324  Q
    |||||||    
T  12390716 catcaaa 12390710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 43686016 - 43686121
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | | || ||||||||||   |  ||||||||||||||  ||||||| ||||||||| |||| ||||||||||||||| |||    
T  43686016 ggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaaca-cccactgtttgtacaatgg 43686114  T
Q  318 catcaaa 324  Q
    |||||||    
T  43686115 catcaaa 43686121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 48928461 - 48928376
Alignment:
Q  239 atgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    ||||||||||||||||| |  |||| ||||||||| |||||||||||| ||||| | ||||||||| ||||||| ||| |||||||    
T  48928461 atgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaa 48928376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 37704140 - 37704239
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcat-caaaagtgttgtgaggaacaccccactgtttgtaca 313  Q
    |||||||||||||||| ||||||||| | ||||| |||| || | ||||||||||||||||||  |||| ||| ||||| ||||||||| ||||||||||    
T  37704140 aatggaaaattctatgatgaaattataaaaatgatttttttatg-aagttaacactatagcataaaaaaatgtagtgagtaacaccccattgtttgtaca 37704238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 37109846 - 37109953
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| | || | |||||||||| | |  |||||||||||||| ||| |||| |||  |||| |||||||||| ||||||||| ||    
T  37109846 tggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatg 37109945  T
Q  317 gcatcaaa 324  Q
     |||||||    
T  37109946 acatcaaa 37109953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 17842772 - 17842666
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | || | |||||||||| | |  |||||||||||||| ||| |||| |||  |||| |||||||||| ||||||||| ||     
T  17842772 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 17842673  T
Q  318 catcaaa 324  Q
    |||||||    
T  17842672 catcaaa 17842666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 32432432 - 32432557
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | | || ||||| |||||| |  |||||||||||     ||||||| ||||||||| ||||||||| |||||||||| ||     
T  32432432 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacact-----atcaaaaatgttgtgagtaacaccccattgtttgtacaatga 32432526  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||   |||||||||||||    
T  32432527 catcaaaagttcagtctccatagtatcatca 32432557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 7334859 - 7334899
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  7334859 tgtacaatgacatcaaaagttcagttctcatagtatcatca 7334899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 31520909 - 31520803
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| |||| |||| | |||| |||||||||| | |  ||||||| |||||| |||||||| | | ||||| ||||| ||| |||||||||||||     
T  31520909 ggaaaattttatgatgaagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacactccattgtttgtacagtga 31520810  T
Q  318 catcaaa 324  Q
    |||||||    
T  31520809 catcaaa 31520803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 31579255 - 31579165
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgttt 308  Q
    |||||||||||||||||| | || ||||| | |||| | |  |||||||||||||| |||||||| |||  |||| |||||||||||||||    
T  31579255 ggaaaattctatggtgaagtcataagaataatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgttt 31579165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 11071271 - 11071311
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  11071271 tgtacagtgacatcaaaagttcagttctcatagtatcatca 11071311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 29173605 - 29173645
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  29173605 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 29173645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 32821149 - 32821109
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  32821149 tgtacaatggcatcaaaagttcagtcctcgtagtatcatca 32821109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 312
Target Start/End: Original strand, 35353125 - 35353177
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtac 312  Q
    |||| |||||||||||||||||||||| ||||| | ||||||| |||||||||    
T  35353125 aagtcaacactatagcatcaaaagtgtagtgagtagcaccccattgtttgtac 35353177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 38053551 - 38053591
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  38053551 tgtacaatgacatcaaaagttcagttctcatagtgtcatca 38053591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 8299192 - 8299254
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaa 282  Q
    |||||||||||||||| | | || |||||||||||| |  ||||||||||||||| |||||||    
T  8299192 aaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactatagtatcaaaa 8299254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 402
Target Start/End: Original strand, 30055592 - 30055630
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcat 402  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  30055592 tgtacaatgacatcaaaagttcagtcctcatagtatcat 30055630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 313
Target Start/End: Complemental strand, 44413564 - 44413470
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttct-aggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtaca 313  Q
    ||||||||||||| || | |||| |||||||||| | |   |||||||||||||| |||||||| | | ||||| ||||||||| ||||||||||    
T  44413564 aaaattctatggtaaagtcatgaaaatgactttttttaatgaagttaacactataacatcaaaaatatagtgagtaacaccccaatgtttgtaca 44413470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 347
Target Start/End: Original strand, 38258521 - 38258650
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    |||||||||| |||||| | || | ||||| |||| | |  |||||||||||||| ||| |||| |||  |||| |||||| ||| ||||||||| || |    
T  38258521 gaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccacaccgtttgtacaatgac 38258620  T
Q  319 atc-aaagttcagttgtcatagtatcatca 347  Q
    ||| |||||||| |  ||||||||||||||    
T  38258621 atcaaaagttcaatcctcatagtatcatca 38258650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 40381940 - 40381977
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttct 255  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  40381940 ggaaaattctacggtgaagttatgagaatgacttttct 40381977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 5657577 - 5657537
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  5657577 tgtacagtggcatcaaaagttcagtcttcatagtatcatca 5657537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 10481578 - 10481686
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttct-aggaaagttaacactatagcatcaaaagtgttgtgaggaacacccc-actgtttgtacagt 315  Q
    ||||||||||||||| || ||| ||||||||||||| | |   |||||||||||||| ||| |||| | |  |||| |||||||| |||||||||||| |    
T  10481578 ggaaaattctatggtaaagttaggagaatgactttttttaatgaagttaacactataacataaaaaatataatgagtaacacccccactgtttgtacaat 10481677  T
Q  316 ggcatcaaa 324  Q
    | |||||||    
T  10481678 gacatcaaa 10481686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 18797392 - 18797432
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||| | |||||||||||||||    
T  18797392 tgtacaatgacatcaaaagttcaatcctcatagtatcatca 18797432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 37347087 - 37347127
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| || ||||||||||||||| |||||||||||||||    
T  37347087 tgtacagtgacatcaaaagttcagtcctcatagtatcatca 37347127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 347
Target Start/End: Original strand, 38053503 - 38053591
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||||| |||||| ||| |||| |||  |||| || |||| |||||||||||| || |||| ||||||||||| ||||||| ||||||    
T  38053503 aagttaatactataacataaaaaatgtaatgagtaaaaccctactgtttgtacaatgacatcaaaagttcagttctcatagtgtcatca 38053591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 38258610 - 38258650
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||| | |||||||||||||||    
T  38258610 tgtacaatgacatcaaaagttcaatcctcatagtatcatca 38258650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 43925159 - 43925207
Alignment:
Q  356 caccccactgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||| |||||||||||| |||||||||||||||   |||||||||||||    
T  43925159 cacctcactgtacaatgacatcaaaagttcagtctacatagtatcatca 43925207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 17333079 - 17332972
Alignment:
Q  110 aatttccatttagccgtgattctcctatttaatttcaattactatctccatttcattactagcactattattgttcagtttcaattcatgctaccgcgtt 209  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||| ||||||||||||||||||| |||    
T  17333079 aatttccatttagctgtgattctcctatttaatttcgattactatcaacatttcatcactagcactattattgttcggtttcaattcatgctaccgtgtt 17332980  T
Q  210 aattcaat 217  Q
    ||||||||    
T  17332979 aattcaat 17332972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 33660569 - 33660441
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| | || | ||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||    
T  33660569 aaaattctatggtgaagtcattaaaatgacttttctagttaagttaacactataacatcaaaagtgttgtgagtaacacccaactgtttgtacagtggca 33660470  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || ||||||||||  || |||||||||||    
T  33660469 tcaaaagttcagtcctcttagtatcatca 33660441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 4264280 - 4264174
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | || | |||||||||||| | |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     
T  4264280 ggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatcccactgtttgtacagtga 4264181  T
Q  318 catcaaa 324  Q
    |||||||    
T  4264180 catcaaa 4264174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 36641988 - 36642116
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| | ||||||||||||||||| |  || |||| ||||||||||||||||||||| ||| |||||| |||||||||||||||| ||    
T  36641988 aaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctcactgtttgtacagtgaca 36642087  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || ||||||||||  ||||||||||||||    
T  36642088 tcaaaagttcagtcctcatagtatcatca 36642116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 13711465 - 13711570
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||||||||||||| | || |||||||||||||| |  ||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||| |    
T  13711465 gaaaattctatggtgaagtcatcagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacagtttgtacagtgac 13711564  T
Q  319 atcaaa 324  Q
    ||||||    
T  13711565 atcaaa 13711570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 347
Target Start/End: Complemental strand, 33551191 - 33551059
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    ||||||||||||| |||||| | ||||||||||||||| |||  |||||||||||||| |||||||| ||| ||||| |||||||||||||||||||| |    
T  33551191 atggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacaccccactgtttgtacaat 33551092  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    | |||| ||||||| ||  ||||||||||||||    
T  33551091 gacatcaaaagttcggtcttcatagtatcatca 33551059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 19424831 - 19424701
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| ||||||||| | ||||||||| ||||||| |  |||||||||||||| |||||||||||||||||| ||||||||| ||||| || |||||    
T  19424831 ggaaaattttatggtgaagtcatgagaatggcttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccattgtttatatagtgg 19424732  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| |||||| |||  ||||||||||||||    
T  19424731 catcaaaagtttagtcctcatagtatcatca 19424701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 2325573 - 2325443
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| ||||| ||||||||||||| |  ||||||||| |||| ||||| || |||  |||| ||||||||| |||||||||| |||    
T  2325573 ggaaaattctatggtgaagttatgtgaatgacttttctcgtgaagttaacaatataacatcataaatgtattgagtaacaccccattgtttgtacactgg 2325474  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  2325473 catcaaaagttcagtcctcatagtatcatca 2325443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 324
Target Start/End: Original strand, 19313850 - 19313958
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||||| | || |||||||||||||| |  ||||||||| ||||||||||||||||||||||| ||||||  ||| ||| ||||||    
T  19313850 atggaaaattctatggtgaagtcattagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccttactatttatacagt 19313949  T
Q  316 ggcatcaaa 324  Q
    | |||||||    
T  19313950 gacatcaaa 19313958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 41464051 - 41463923
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| |  |||||||||| ||| | |  ||||||| ||||||  ||||||||||||||||| |||||| |||||||||||||||||||    
T  41464051 aaaattctatggtgaagtcgtgagaatgacatttttggtgaagttaatactataaaatcaaaagtgttgtgagtaacacctcactgtttgtacagtggca 41463952  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || |||||||| |  ||||||||||||||    
T  41463951 tcaaaagttcaatcctcatagtatcatca 41463923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 43771039 - 43770936
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| | || ||||||| |||| | |  |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||    
T  43771039 aaaattctatggtgaagtcattagaatgattttt-tggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtggca 43770941  T
Q  320 tcaaa 324  Q
    |||||    
T  43770940 tcaaa 43770936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 218 - 344
Target Start/End: Original strand, 4166922 - 4167049
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | | || |||||||||||| |  ||||||||| ||||| ||||||| | ||||||| |||||||||||||||||||| |||    
T  4166922 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacaccccactgtttgtacaatgg 4167021  T
Q  318 catc-aaagttcagttgtcatagtatca 344  Q
    |||| ||||||||||   ||||||||||    
T  4167022 catcaaaagttcagtccccatagtatca 4167049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 17333187 - 17333120
Alignment:
Q  18 attggtgcatggctaactacttgttatttcaatttgacttacttgtgccgtgaacctttgtgaatgct 85  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  17333187 attgatgcatggctaactacttgttatttcaatttgccttacttgtgccatgaacctttgtgaatgct 17333120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 18494471 - 18494386
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccac 303  Q
    |||||||||| ||||||| | |||| |||||||||||| |  ||||||||||||||||||||||||||||||||| ||||||||||    
T  18494471 ggaaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccac 18494386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 347
Target Start/End: Original strand, 4478411 - 4478499
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||| |||||| |||  ||||||||||||||    
T  4478411 aagttaacactataacatcaaaagtgttgtgagtaacactccattgtttgtacagtggcatcaaaagtttagtcctcatagtatcatca 4478499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 332
Target Start/End: Original strand, 26357576 - 26357692
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||| ||||||||| | |||| ||||||||||||    |||||||||||||| |||||||| ||| ||||| |||| ||||||||||||||||||    
T  26357576 tggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatcccactgtttgtacagtg 26357675  T
Q  317 gcatc-aaagttcagtt 332  Q
     |||| |||||||||||    
T  26357676 acatcaaaagttcagtt 26357692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 345
Target Start/End: Complemental strand, 31570937 - 31570809
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| |||||||||| |||||||| |  || ||||||||||| ||| ||||||||||| || ||||||||||| ||| || ||||     
T  31570937 ggaaaattctatggtgaagttatgagaataacttttctggtgaaattaacactataacattaaaagtgttgtaagtaacaccccactatttttatagtga 31570838  T
Q  318 catc-aaagttcagttgtcatagtatcat 345  Q
    |||| ||||||||||   |||||||||||    
T  31570837 catcaaaagttcagtccacatagtatcat 31570809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 260 - 324
Target Start/End: Complemental strand, 27350099 - 27350035
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||| |||||||    
T  27350099 aagttaacactatagcatcaaaaatgttgtgagtaacaccacactgtttgtacagtgacatcaaa 27350035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 292
Target Start/End: Original strand, 41465508 - 41465583
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgag 292  Q
    ||||||||||||||||||| | ||||||||||||||||| |  |||||||||||||||||||||| |||| |||||    
T  41465508 tggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaggtgtagtgag 41465583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 3176941 - 3177069
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| ||| || ||||||||||||    ||||||| ||||||  ||||||| |||| |||| ||||| | |||||||||||| || ||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatgttttgagtaacacgcaactgtttgtacaatgaca 3177040  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || ||||||||||  ||||||||||||||    
T  3177041 tcaaaagttcagtcctcatagtatcatca 3177069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 347
Target Start/End: Original strand, 4763627 - 4763761
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagtt---aacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtaca 313  Q
    |||||||||||||| |||| | |||| ||||||||||||    |||||   ||||||||| || ||||| ||| ||||| ||||||||||||||||||||    
T  4763627 tggaaaattctatgatgaagtcatgaaaatgacttttctgatgaagttaacaacactatatcaacaaaactgtagtgagtaacaccccactgtttgtaca 4763726  T
Q  314 gtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||| |||| |||||||||||  |||||||| ||||    
T  4763727 gtgacatcaaaagttcagttcccatagtataatca 4763761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 33709393 - 33709305
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||||||||| |||||||||||||| ||| ||||| |||||||| |||||||| |||| ||||||||||   |||||||||||||    
T  33709393 aagttaacactataacatcaaaagtgttgcgagtaacactccactgttagtacagtgacatcaaaagttcagtccccatagtatcatca 33709305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 29242341 - 29242211
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| ||||  |||| | |  ||||||| |||||| ||| |||| | | ||| | ||||||||||||||||||||||||    
T  29242341 ggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacaccccactgtttgtacagtgg 29242242  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
     ||| ||||||||||  ||||||||||||||    
T  29242241 tatcaaaagttcagtcttcatagtatcatca 29242211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 39167566 - 39167436
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| ||||||||| | | |||||||| |||| |    |||||||||  |||| ||||||||| ||||||| |||||| ||||||||||||| ||     
T  39167566 ggaaaattttatggtgaagtcacgagaatgatttttttgatgaagttaacagaatagtatcaaaagtattgtgagtaacacctcactgtttgtacaatga 39167467  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  39167466 catcaaaagttcagtcctcatagtatcatca 39167436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 44285991 - 44286055
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    ||||||||||||||||||||||||||||| ||| || | | ||||||||||| ||||||||||||    
T  44285991 aagttaacactatagcatcaaaagtgttgcgagcaatatctcactgtttgtatagtggcatcaaa 44286055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 347
Target Start/End: Original strand, 37905708 - 37905838
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| |||| | ||||| |||| | |  |||||||||||||| ||| |||| |||   ||| |||||||||| ||||||||| ||    
T  37905708 tggaaaattctatggtgaagttataaaaatgattttt-tggtgaagttaacactataacataaaaaatgtaacgagtaacaccccaccgtttgtacaatg 37905806  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
     |||| ||||||||||  ||||||||||||||    
T  37905807 acatcaaaagttcagtcctcatagtatcatca 37905838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 5881599 - 5881645
Alignment:
Q  278 caaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  5881599 caaaagtgttgtgagtaacaccccactgtttgtacagtgacatcaaa 5881645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 11366584 - 11366454
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||||| || |||||||||||| | |  || ||||||||||| |||||||| |||  |||| |||| | |||| |||||| | ||     
T  11366584 ggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctcactatttgtataatga 11366485  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| |||||||||   ||||||||||||||    
T  11366484 catcaaaagttcagccctcatagtatcatca 11366454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 43648406 - 43648318
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||||||||| |||||||| |||  |||| |||||| ||||||||||| | || |||| ||||||||||  ||||||||||||||    
T  43648406 aagttaacactataacatcaaaaatgtaatgagtaacacctcactgtttgtataatgacatcaaaagttcagtcatcatagtatcatca 43648318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 17054299 - 17054193
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | ||| ||||||||||| | |  ||||||| |||||| |||||||| ||| || || |||| | || |||||||||| ||     
T  17054299 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctcattgtttgtacaatga 17054200  T
Q  318 catcaaa 324  Q
    |||||||    
T  17054199 catcaaa 17054193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 17071940 - 17071810
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | ||| ||||||||||| | |  |||||||||||||| || ||||| ||| || || |||| | || | |||||||| ||     
T  17071940 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctcattatttgtacaatga 17071841  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||| ||  ||||||||||||||    
T  17071840 catcaaaagttcggtattcatagtatcatca 17071810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 33902065 - 33902196
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    |||||||||||||||| |||| |  | |||||||||||||| |  ||||||||||  || ||| |||| ||| ||||| || ||||||||||||||| |     
T  33902065 aatggaaaattctatgatgaagtcgttagaatgacttttctggtgaagttaacac--taacataaaaaatgtagtgagtaataccccactgtttgtaaaa 33902162  T
Q  315 tggcatc-aaagttcagttgtcatagtatcatca 347  Q
    || |||| ||||||||||  ||| ||||||||||    
T  33902163 tgacatcaaaagttcagtcctcaaagtatcatca 33902196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 347
Target Start/End: Complemental strand, 41051359 - 41051278
Alignment:
Q  268 actatagcatcaaaagtgttgtgaggaacaccccactgtttgta-cagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||||||||||||||||||   |||||  |||| |||||| |||||||||| ||||||||||  ||||||||||||||    
T  41051359 actatagcatcaaaagtgttgtgtataacacttcactatttgtaccagtggcatcaaaagttcagtcctcatagtatcatca 41051278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 58025 - 58057
Alignment:
Q  221 aaattctatggtgaaattatgagaatgactttt 253  Q
    |||||||||||||||||||||||||||||||||    
T  58025 aaattctatggtgaaattatgagaatgactttt 58057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 2325483 - 2325443
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  2325483 tgtacactggcatcaaaagttcagtcctcatagtatcatca 2325443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 3177029 - 3177069
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  3177029 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 3177069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 19289484 - 19289396
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||||||||| |||||||| | |  |||| ||||||||| |||||||||| || |||| |||||| |||| ||| ||||||||||    
T  19289484 aagttaacactataacatcaaaaatataatgagtaacaccccattgtttgtacaatgacatcaaaagttaagttctcacagtatcatca 19289396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 31861894 - 31861930
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgactttt 253  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31861894 tggaaaattctatggtgaagttatgagaatgactttt 31861930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 37905798 - 37905838
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  37905798 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 37905838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 39167476 - 39167436
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  39167476 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 39167436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 304
Target Start/End: Original strand, 44913661 - 44913747
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccact 304  Q
    ||||||||||||||||||| | | || |||||||||| |  ||| ||||||||| ||| ||||||| ||||||||| |||||| ||||    
T  44913661 tggaaaattctatggtgaagtcacgaaaatgacttttatgtgaa-gttaacactgtagtatcaaaaatgttgtgagtaacacctcact 44913747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 4167012 - 4167049
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatca 401  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  4167012 tgtacaatggcatcaaaagttcagtccccatagtatca 4167049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 35958907 - 35959004
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtaca 313  Q
    ||||||||||||||| |||| | || | |||||||||| | |  |||||  ||||||| ||| |||| |||  |||| ||||||||||||||||||||    
T  35958907 atggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacaccccactgtttgtaca 35959004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 404
Target Start/End: Complemental strand, 41051311 - 41051278
Alignment:
Q  371 tggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||| |||||||||||||||    
T  41051311 tggcatcaaaagttcagtcctcatagtatcatca 41051278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 4478459 - 4478499
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||| ||| |||||||||||||||    
T  4478459 tgtacagtggcatcaaaagtttagtcctcatagtatcatca 4478499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 7007054 - 7006994
Alignment:
Q  288 gtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||| |||| ||||||||||||||||| ||||| |||||| ||||  |||||||||||||    
T  7007054 gtgagtaacatcccactgtttgtacagtagcatcaaaagtttagttcccatagtatcatca 7006994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 19289436 - 19289396
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||| |||||||| ||||||||||    
T  19289436 tgtacaatgacatcaaaagttaagttctcacagtatcatca 19289396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 33660481 - 33660441
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||||| ||| |||||||||||    
T  33660481 tgtacagtggcatcaaaagttcagtcctcttagtatcatca 33660441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 36642076 - 36642116
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| || ||||||||||||||| |||||||||||||||    
T  36642076 tgtacagtgacatcaaaagttcagtcctcatagtatcatca 36642116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 41463963 - 41463923
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||| | |||||||||||||||    
T  41463963 tgtacagtggcatcaaaagttcaatcctcatagtatcatca 41463923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 216 - 347
Target Start/End: Original strand, 4015449 - 4015581
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||||| | |||||||||||||||||    ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||    
T  4015449 atggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacccaactgtttgtagagt 4015548  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    | |||| ||||||||||  ||||||||||||||    
T  4015549 gacatcaaaagttcagtcctcatagtatcatca 4015581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 7327668 - 7327537
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaa-cactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    |||||||||||||||||| ||||||||||||||||| |||  ||||||| ||||||| |||||||||||||||||| ||||| ||| | |||||||||||    
T  7327668 ggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaaacactataacatcaaaagtgttgtgagtaacactccattatttgtacagtg 7327569  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
     |||| ||||||||||   |||||||||||||    
T  7327568 acatcaaaagttcagtccccatagtatcatca 7327537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 221 - 324
Target Start/End: Original strand, 32373466 - 32373567
Alignment:
Q  221 aaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcat 320  Q
    |||||||||| |||| | |||||||||||||||| |  |||||||||||||||||||||||||||||||||| |  || |||||||||||||||||||||    
T  32373466 aaattctatgatgaagtcatgagaatgacttttccaataaagttaacactatagcatcaaaagtgttgtgagta--actccactgtttgtacagtggcat 32373563  T
Q  321 caaa 324  Q
    ||||    
T  32373564 caaa 32373567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 347
Target Start/End: Original strand, 37203057 - 37203188
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| | || | ||||| |||| |    |||||||||||||| |||||||| ||| ||||| |||||||||||||||||||||||    
T  37203057 tggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtacagtg 37203156  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||| ||||||||||  ||||||||||||||    
T  37203157 gcatcaaaagttcagtcctcatagtatcatca 37203188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 239 - 347
Target Start/End: Complemental strand, 11357529 - 11357419
Alignment:
Q  239 atgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaaca-ccccactgtttgtacagtggcatc-aaagttcagttgtca 336  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||| | ||||| |||| |||||||||||||||||| ||||| ||||||||||  |||    
T  11357529 atgagaatgacttttctggtgaagttaacactatagcatcaaaagtatagtgagtaacacccccactgtttgtacagttgcatcaaaagttcagtcatca 11357430  T
Q  337 tagtatcatca 347  Q
    |||||||||||    
T  11357429 tagtatcatca 11357419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 11466815 - 11466921
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| |  ||||||||||||||||    ||||||| |||||| ||||  |||||||||||| ||||||||||||||||||||||||    
T  11466815 ggaaaattctatggtgaagtcttgagaatgacttttctgatgaagttaagactataacatcgcaagtgttgtgagtaacaccccactgtttgtacagtgg 11466914  T
Q  318 catcaaa 324  Q
    |||||||    
T  11466915 catcaaa 11466921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 21193597 - 21193703
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||||||| || | ||||||||||||||||| |  ||||||||||| | | ||||||||||||||||| |||||||||||||||||| ||||     
T  21193597 ggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacactgttgaatcaaaagtgttgtgagtaacaccccactgtttgtagagtga 21193696  T
Q  318 catcaaa 324  Q
    |||||||    
T  21193697 catcaaa 21193703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 22450959 - 22451089
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||||||||| |||||| |  |||| |||||||||||||||||||||| ||||| | |||| |||||||||||  ||||    
T  22450959 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcacctcactgtttgtatggtgg 22451058  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||   |||||||||||||    
T  22451059 catcaaaagttcagtccccatagtatcatca 22451089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 35844317 - 35844423
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| |||||||||||| |  |||||||||||||| || ||||| ||||||||| |||||| ||||||||||||||||     
T  35844317 ggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctcactgtttgtacagtga 35844416  T
Q  318 catcaaa 324  Q
    |||||||    
T  35844417 catcaaa 35844423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 347
Target Start/End: Original strand, 37157698 - 37157828
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| | |||| |||| ||||| |    |||||||||||||| |||||||| ||| ||||| |||||||||||| ||||||||||    
T  37157698 tggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactg-ttgtacagtg 37157796  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||| ||||||||||  ||||||||||||||    
T  37157797 gcatcaaaagttcagtcatcatagtatcatca 37157828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 347
Target Start/End: Complemental strand, 51213167 - 51213036
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| | ||||||||||||||| | |  ||||||||||| || ||| |||| |||  |||| |||||||||||||||||||| ||    
T  51213167 tggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacaccccactgtttgtacaatg 51213068  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||| |||||| |||  ||||||||||||||    
T  51213067 gcatcaaaagttgagtcctcatagtatcatca 51213036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 44186686 - 44186556
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||||| |||| |   |||||||| |||| | |  ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||     
T  44186686 ggaaaattctatgatgaagtcgagagaatgatttttttggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccgctgtttatacagtga 44186587  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||   |||||||||||||    
T  44186586 catcaaaagttcagtccccatagtatcatca 44186556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 48354932 - 48355062
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||||||||| |||| | |  ||||||||||||||  || |||| |||  |||| ||||||||| |||||||||| |||    
T  48354932 ggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacaccccattgtttgtacaatgg 48355031  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||| ||||||||||||||    
T  48355032 catcaaaagttcagttctcatagtatcatca 48355062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 346
Target Start/End: Original strand, 39282644 - 39282772
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| ||||| ||||||   ||| ||||||||||| |||||||| || |||||| || |||||||||||| ||||||||    
T  39282644 ggaaaattctatggtgaagtcatgaaaatgatttttctgataaaattaacactataacatcaaaactg-tgtgagtaataccccactgtttatacagtgg 39282742  T
Q  318 catc-aaagttcagttgtcatagtatcatc 346  Q
    |||| ||||||||||| ||||| |||||||    
T  39282743 catcaaaagttcagttctcatattatcatc 39282772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 2007966 - 2008030
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||    
T  2007966 aagttaacactatagcgttaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaa 2008030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 346
Target Start/End: Original strand, 40936003 - 40936111
Alignment:
Q  239 atgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcat 337  Q
    |||||||||| |||||| |  ||||||||||||||||||||||||||||| ||| |||||| || ||||| ||||||| |||| ||||||||||  ||||    
T  40936003 atgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttgcgagtaacacctcattgtttatacagtgacatcaaaagttcagtcctcat 40936102  T
Q  338 agtatcatc 346  Q
    |||||||||    
T  40936103 agtatcatc 40936111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 52041108 - 52040977
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacacccc-actgtttgtacagtg 316  Q
    ||||||||||  |||||| | ||||||||||||||||| |  ||||||| |||||| |||||||||||| ||||| ||| |||| | |||||||| ||||    
T  52041108 ggaaaattctgaggtgaagtcatgagaatgacttttctggtgaagttaatactataacatcaaaagtgtagtgagtaactccccaaatgtttgtatagtg 52041009  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||| ||||||||||  ||||||||||||||    
T  52041008 gcatcaaaagttcagtcatcatagtatcatca 52040977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 40552444 - 40552314
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | ||||||||||||||| | |  |||||||||||||| |||||||| |||  |||| ||||| |||| ||||||||| ||     
T  40552444 ggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaacactccaccgtttgtacaatga 40552345  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||| ||||||||    
T  40552344 catcaaaagttcagtcctcataatatcatca 40552314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 217 - 347
Target Start/End: Original strand, 45174493 - 45174626
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgt--tgtgaggaacaccccactgtttgtacag 314  Q
    ||||||||| ||||||||| || ||||||| |||||| | |  |||||||||||||| ||||||||||||  |||||| |||||  ||||||||||||||    
T  45174493 tggaaaattttatggtgaagttgtgagaataacttttttggtgaagttaacactataacatcaaaagtgttgtgtgagtaacacttcactgtttgtacag 45174592  T
Q  315 tggcatc-aaagttcagttgtcatagtatcatca 347  Q
    | ||||| ||||||||||   |||||||||||||    
T  45174593 tagcatcaaaagttcagtccccatagtatcatca 45174626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 228 - 331
Target Start/End: Original strand, 29099356 - 29099460
Alignment:
Q  228 atggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagt 326  Q
    |||||||| | || |||||||||||||| |  |||||||||||||| ||| |||| ||| ||||| ||||||||||||||||||||||| |||| |||||    
T  29099356 atggtgaagtcattagaatgacttttctggtgaagttaacactataacataaaaaatgtcgtgagtaacaccccactgtttgtacagtgacatctaaagt 29099455  T
Q  327 tcagt 331  Q
    |||||    
T  29099456 tcagt 29099460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 46297945 - 46297841
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| | |||| |||||||||||| |  |||||||||||||| |||||||| | | ||||| ||||| |||||||||||||| ||||     
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaacacaccactgtttgtacaatggcg 46297846  T
Q  320 tcaaa 324  Q
    |||||    
T  46297845 tcaaa 46297841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 3362242 - 3362350
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctagga-aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||| ||||| ||||||||||||| ||| |||||| | ||  |||||||||||||||||||| || | | ||||| |||| |||||| ||||||||||    
T  3362242 tggaaagttctacggtgaaattatgaaaataactttttttggtgaagttaacactatagcatcagaaatatagtgagtaacatcccactatttgtacagt 3362341  T
Q  316 ggcatcaaa 324  Q
    |||||||||    
T  3362342 ggcatcaaa 3362350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 3655387 - 3655257
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| ||||||||| | || | |||||||||| |   ||||||||||||||| ||| |||| |||  |||| |||||||||| ||||||||| ||     
T  3655387 ggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 3655288  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  3655287 catcaaaagttcagtcctcatagtatcatca 3655257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 34132926 - 34133032
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||||  |||| | | || |||||||||| | |  || |||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||     
T  34132926 ggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaatga 34133025  T
Q  318 catcaaa 324  Q
    |||||||    
T  34133026 catcaaa 34133032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 347
Target Start/End: Complemental strand, 53229293 - 53229207
Alignment:
Q  263 ttaacactatagcatcaaaagtgttgtgaggaacaccc-cactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||| ||||||||||  ||||| ||||||||    
T  53229293 ttaacactatagcatcaaaagtgtagtgagcaacaccctcaatgtttgtacagttgcatcaaaagttcagtcatcataatatcatca 53229207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 347
Target Start/End: Complemental strand, 20373484 - 20373351
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    ||||||||||| ||| ||||| | || ||||||| |||| | |  ||||||| |||||| |||||||| |||   ||| ||||||||||||||||||||     
T  20373484 aatggaaaattttatagtgaagtcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacaccccactgtttgtacaa 20373385  T
Q  315 tggcatc-aaagttcagttgtcatagtatcatca 347  Q
    || |||| ||||||||||| |||| |||||||||    
T  20373384 tgacatcaaaagttcagttctcatggtatcatca 20373351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 25579731 - 25579836
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||| |||||| || |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||  ||||  | ||| ||| ||||||| |    
T  25579731 gaaaattttatggttaagttatgagaatgatttttctggtgaagttaatactatagcatcaaaagtgttgtgaataacattctactatttatacagtgac 25579830  T
Q  319 atcaaa 324  Q
    ||||||    
T  25579831 atcaaa 25579836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 315
Target Start/End: Complemental strand, 11835790 - 11835699
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    ||||||||||||||||| | |||||||||| |||| | |  |||||||||||||     ||||||||||||||| |||||| |||||||||||||||    
T  11835790 gaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactat-----caaaagtgttgtgagtaacacctcactgtttgtacagt 11835699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 48355022 - 48355062
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  48355022 tgtacaatggcatcaaaagttcagttctcatagtatcatca 48355062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 44891496 - 44891585
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgt 306  Q
    |||||||||| || |||||| | |||| |||||||||| | |  |||||||||||||| |||||||||||||||||| |||| ||||||||    
T  44891496 atggaaaattatacggtgaagtcatgaaaatgactttt-tggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgt 44891585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 324
Target Start/End: Complemental strand, 22446247 - 22446144
Alignment:
Q  221 aaattctatggtgaaattatgagaatgacttttctagga-aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||| |||||| | |||| |||||||||| | ||  ||||||||| |||| |||||||| | | ||||| ||||||||||| ||||||||||||||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaacattatatcatcaaaaatatagtgagtaacaccccact-tttgtacagtggca 22446149  T
Q  320 tcaaa 324  Q
    |||||    
T  22446148 tcaaa 22446144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 345
Target Start/End: Complemental strand, 26941445 - 26941317
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | || ||||||| |||| | |  ||||||||||||||  ||||||| | |  |||| |||||||||||||||||| | ||     
T  26941445 ggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataaaatcaaaattataatgagtaacaccccactgtttgtataatga 26941346  T
Q  318 catc-aaagttcagttgtcatagtatcat 345  Q
    |||| ||||||||||  |||| |||||||    
T  26941345 catcaaaagttcagtcctcatggtatcat 26941317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 302
Target Start/End: Original strand, 33698182 - 33698263
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacacccca 302  Q
    ||||||||||||||||||| | ||||||||    | |||||  |||||||||||||| |||||||| ||||||||| |||||||||    
T  33698182 tggaaaattctatggtgaagtcatgagaat----tctctagtgaagttaacactataacatcaaaaatgttgtgagtaacacccca 33698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 42506214 - 42506130
Alignment:
Q  264 taacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||||| |||||||| |||  |||| || ||||||||||||||||| || |||| ||||||||||  ||||||||||||||    
T  42506214 taacactataacatcaaaattgtaatgagtaataccccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatca 42506130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 1089719 - 1089800
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaaca 297  Q
    ||||||||||||||||||| || ||||| ||||| |||||||| |||||||| | ||||| ||||||| ||| ||||| ||||    
T  1089719 aatggaaaattctatggtg-aagtatgataatgatttttctagtaaagttaatattatagtatcaaaaatgtagtgagtaaca 1089800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 312
Target Start/End: Complemental strand, 43976068 - 43975979
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtac 312  Q
    |||||| ||||||||| | ||||||||||||||| |    |||| |||||||||||||||||||||| ||||| | ||| ||||| |||||||    
T  43976068 aaaattttatggtgaagtcatgagaatgacttttttg---aagtcaacactatagcatcaaaagtgtagtgagtagcactccactatttgtac 43975979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 4761836 - 4761704
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctagga--aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||| | |||||| |||||||| |  |   ||||||| ||||||  ||||||| |||  |||| |||||  ||||||||||||| |    
T  4761836 ggaaaattctatggtgaattcatgagattgacttttttttggtgaagttaatactataatatcaaaaatgtaatgagtaacacttcactgtttgtacaat 4761737  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    | |||| ||||||||||  ||||||||||||||    
T  4761736 gacatcaaaagttcagtcctcatagtatcatca 4761704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 3655297 - 3655257
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  3655297 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 3655257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 4761744 - 4761704
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  4761744 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 4761704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 20373391 - 20373351
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  20373391 tgtacaatgacatcaaaagttcagttctcatggtatcatca 20373351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 347
Target Start/End: Complemental strand, 27480566 - 27480434
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    ||||||||||||||| |||| | ||||||||||  ||| | | ||||| ||||||||| |||||||||| |  |||| | || || | ||||||||| ||    
T  27480566 atggaaaattctatgatgaagtcatgagaatgatatttttggtaaagtcaacactataacatcaaaagtataatgagtagcatccaattgtttgtacggt 27480467  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    | |||| ||||||||||   |||||||||||||    
T  27480466 gacatcaaaagttcagtccccatagtatcatca 27480434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 37203148 - 37203188
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  37203148 tgtacagtggcatcaaaagttcagtcctcatagtatcatca 37203188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 42506170 - 42506130
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  42506170 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 42506130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 47481555 - 47481619
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    |||||||||||||| |||||||| |||  |||| |||||||||||||||||| | || |||||||    
T  47481555 aagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaatgacatcaaa 47481619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 51213076 - 51213036
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  51213076 tgtacaatggcatcaaaagttgagtcctcatagtatcatca 51213036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 404
Target Start/End: Complemental strand, 46994754 - 46994716
Alignment:
Q  366 tacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  46994754 tacaatgacatcaaaagttcagtcctcatagtatcatca 46994716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 403
Target Start/End: Original strand, 39282735 - 39282772
Alignment:
Q  366 tacaatggcatcaaaagttcagttctcatagtatcatc 403  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  39282735 tacagtggcatcaaaagttcagttctcatattatcatc 39282772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 40640682 - 40640645
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttct 255  Q
    |||||||||||||||||| | |||||||||||||||||    
T  40640682 ggaaaattctatggtgaagtcatgagaatgacttttct 40640645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 53175714 - 53175751
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttct 255  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  53175714 ggaaaattttatggtgaagttatgagaatgacttttct 53175751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 2613923 - 2613967
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccact 304  Q
    |||||||||||||| || ||||||||||||||| |||||| ||||    
T  2613923 aagttaacactataacaccaaaagtgttgtgagtaacaccacact 2613967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 37157788 - 37157828
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  37157788 tgtacagtggcatcaaaagttcagtcatcatagtatcatca 37157828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 40552354 - 40552314
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||| ||||||||    
T  40552354 tgtacaatgacatcaaaagttcagtcctcataatatcatca 40552314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 45879546 - 45879498
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaa 266  Q
    ||||||||||||| |||| | ||||||||||||||||| | ||||||||    
T  45879546 ggaaaattctatgctgaagtcatgagaatgacttttctggtaaagttaa 45879498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 53176135 - 53176175
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||  ||||||||||||||| |||||||||||||||    
T  53176135 tgtacaataacatcaaaagttcagtcctcatagtatcatca 53176175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 37287733 - 37287840
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctagg-aaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    |||||||||||||||||| | ||||||||||||||| | || ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  37287733 ggaaaattctatggtgaagtaatgagaatgactttttttggtaaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtg 37287832  T
Q  317 gcatcaaa 324  Q
    ||||||||    
T  37287833 gcatcaaa 37287840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 215 - 347
Target Start/End: Complemental strand, 55241318 - 55241185
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    ||||||||||||||||||||| | |||||||||||||||||||  ||||||| ||||||  ||||||| ||||| ||| |||||||||||||||||||||    
T  55241318 aatggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaatactatattatcaaaattgttgcgagtaacaccccactgtttgtacag 55241219  T
Q  315 tggcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||||| ||||||||||   |||||||||||||    
T  55241218 tggcatcaaaagttcagtccccatagtatcatca 55241185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 34948306 - 34948178
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||| ||||||||| | ||||||||||||||||| |  |||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||    
T  34948306 aaaattttatggtgaagtcatgagaatgacttttctggcgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtaaagtggca 34948207  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || ||||||||||  ||||| ||||||||    
T  34948206 tcaaaagttcagtcctcataatatcatca 34948178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 49375963 - 49376097
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgactttt-ctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtaca 313  Q
    |||||||||||||| |||||| | ||||||||||||||| || |  ||||||||| ||||||||||||||||| ||||| |||||||||||| |||||||    
T  49375963 aatggaaaattctacggtgaagtcatgagaatgactttttctggtgaagttaacattatagcatcaaaagtgtcgtgagtaacaccccactgcttgtaca 49376062  T
Q  314 gtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||| ||||||||||  ||||||||||||||    
T  49376063 gtggcatcaaaagttcagtcttcatagtatcatca 49376097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 347
Target Start/End: Complemental strand, 28003199 - 28003067
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||||| | ||||||||||||||||| |  |||| |||||||||||||||||||||| || || |  || ||||||||||||||||    
T  28003199 atggaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtcagtagtactccactgtttgtacagt 28003100  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    | |||| ||||||||||  ||||||||||||||    
T  28003099 gacatcaaaagttcagtcatcatagtatcatca 28003067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 217 - 347
Target Start/End: Original strand, 7703516 - 7703647
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    |||||||||||||| | || | ||||||||||||||||| |  |||||||||||||| ||||||||||||||| || ||||||||||||||||||| |||    
T  7703516 tggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacaccccactgtttgtacggtg 7703615  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
     |||| ||||||||||   |||||||||||||    
T  7703616 acatcaaaagttcagtccccatagtatcatca 7703647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 25701268 - 25701138
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| ||||||||| | |||| |||||||||| | | |||||||||| |||| |||||||||||| ||||| ||||||| |||||||||||||||     
T  25701268 ggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacaccctactgtttgtacagtga 25701169  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  25701168 catcaaaagttcagtcctcatagtatcatca 25701138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 4597994 - 4598098
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||| ||||||||| | || |||||||||||||| |  |||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  4597994 gaaaattttatggtgaagtcattagaatgacttttctggtgaagttaacactataacatcaaa-gtgttgtgagtaacaccccactgtttgtacagtggc 4598092  T
Q  319 atcaaa 324  Q
    ||||||    
T  4598093 atcaaa 4598098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 39397915 - 39398024
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    ||||||||||||||||||||| | || |||||||||||| | |  |||||||||||||| ||| |||||||||||||| ||||||||| |||||||||||    
T  39397915 aatggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacaccccattgtttgtacag 39398014  T
Q  315 tggcatcaaa 324  Q
    || |||||||    
T  39398015 tgacatcaaa 39398024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 47253751 - 47253878
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| | ||||||||||||||| | |  |||||||||||||| |||||||||||||||||| |||| |||| ||||| ||||||| ||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaaca-cccattgtttatacagtgaca 47253849  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || ||||||||||  ||||||||||||||    
T  47253850 tcaaaagttcagtcctcatagtatcatca 47253878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 29584409 - 29584281
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| |  || ||||||||||||| |  |||||||||||||| ||||||||||||  |||| |||||| ||||||||||||| |||    
T  29584409 ggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacacctcactgtttgtacaatgg 29584312  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  29584311 catcaaaagttcagtcttcatagtatcatca 29584281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 30002835 - 30002705
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||| ||||||||||| | || | ||||| |||||| |  ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||     
T  30002835 ggaaaactctatggtgaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctcactgtttgtacagtga 30002736  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  || |||||||||||    
T  30002735 catcaaaagttcagtcttcttagtatcatca 30002705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 38011854 - 38011960
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||||| ||||||||||||||||| |  |||| ||||||||| |||||||||||| ||||  | ||||||||||||||||| |||     
T  38011854 ggaaaattctatggtgaaatcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgaatagcaccccactgtttgtacggtgc 38011953  T
Q  318 catcaaa 324  Q
    |||||||    
T  38011954 catcaaa 38011960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 239 - 347
Target Start/End: Original strand, 23761093 - 23761202
Alignment:
Q  239 atgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcat 337  Q
    |||||||||||| |||| | ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||| |||| ||||||||||   |||    
T  23761093 atgagaatgactattcttgtaaagttaacactataacatcaaaagtgttgtgagtaacacctcactgtttgtatagtgacatcaaaagttcagtccccat 23761192  T
Q  338 agtatcatca 347  Q
    ||||||||||    
T  23761193 agtatcatca 23761202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 27396618 - 27396722
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| | ||||||||||||||||| |  ||||||||| |||||||| ||||||||| |||| ||||||| |||||||||||| || ||    
T  27396618 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacaccctactgtttgtacaatgaca 27396717  T
Q  320 tcaaa 324  Q
    |||||    
T  27396718 tcaaa 27396722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 35021246 - 35021140
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| |||||||||||| |  ||||||||| |||| |||||||| ||| ||||| ||||| |||||||||||||| |||    
T  35021246 ggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaacacaccactgtttgtacattgg 35021147  T
Q  318 catcaaa 324  Q
    | |||||    
T  35021146 cgtcaaa 35021140  T

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Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 54499425 - 54499356
Alignment:
Q  243 gaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtac 312  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  54499425 gaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccaccgtttgtac 54499356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 17167715 - 17167819
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| ||| || ||||||||||||    ||||||||| ||||  ||||||| ||||||||| |||||||||||||||||||| || ||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17167814  T
Q  320 tcaaa 324  Q
    |||||    
T  17167815 tcaaa 17167819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 17173292 - 17173396
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| ||| || ||||||||||||    ||||||||| ||||  ||||||| ||||||||| |||||||||||||||||||| || ||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17173391  T
Q  320 tcaaa 324  Q
    |||||    
T  17173392 tcaaa 17173396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 33341397 - 33341505
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtg----ttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||| ||||| | |||||||||| |||||| |  || ||||||||||| |||||||| ||    ||| ||||||||||||||||||||||||||    
T  33341397 aaaattctatagtgaagtcatgagaatgatttttctggtgaaattaacactatatcatcaaaattgattgttgcgaggaacaccccactgtttgtacagt 33341496  T
Q  316 ggcatcaaa 324  Q
    |||||||||    
T  33341497 ggcatcaaa 33341505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 25184113 - 25184243
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||||||||||| || | |  |||||||||||||| |||||||| |||  |||| ||||| | |||||||||||| ||     
T  25184113 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatga 25184212  T
Q  318 cat-caaagttcagttgtcatagtatcatca 347  Q
    ||| ||||||||| |  ||||||||||||||    
T  25184213 catccaaagttcaatcttcatagtatcatca 25184243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 35025799 - 35025669
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||||| |||| | |||| ||||| |||||| |  |||| |||||||||||||||||||||| ||||| | ||||||||||||| |||  ||     
T  35025799 ggaaaattctatgctgaagtcatgaaaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttatacgttga 35025700  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  || |||||||||||    
T  35025699 catcaaaagttcagtcctcgtagtatcatca 35025669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 347
Target Start/End: Complemental strand, 19440862 - 19440729
Alignment:
Q  216 atggaaaattctatggtgaaatt-atgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    ||||||||||||||||||||| | ||||||||||||||| | |  | |||||||||||| |||||||| |||  |||  ||||| |||| |||||||||     
T  19440862 atggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatgtaatgattaacactccaccgtttgtacaa 19440763  T
Q  315 tggcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||||| ||||||||||  ||||| ||||||||    
T  19440762 tggcatcaaaagttcagtcctcataatatcatca 19440729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 347
Target Start/End: Complemental strand, 36493902 - 36493769
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    |||| |||||||||||||||| | |||| ||| |||||| | |  ||||||| |||||| |||||||| | | ||||| ||||||||| |||||||||||    
T  36493902 aatgaaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacaccccattgtttgtacag 36493803  T
Q  315 tggcatc-aaagttcagttgtcatagtatcatca 347  Q
    || |||| ||||||||||   |||||||||||||    
T  36493802 tgacatcaaaagttcagtccccatagtatcatca 36493769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 19089664 - 19089534
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | || ||||| |||||| |    ||||||||||||||  ||||||| |||  |||| |||||||||||||||||| | ||     
T  19089664 ggaaaattctatggtgaagtcataagaataacttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtataatga 19089565  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  19089564 catcaaaagttcagtcctcatagtatcatca 19089534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 323
Target Start/End: Original strand, 4205116 - 4205221
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | | || ||||||||||||    ||||||||||||||  ||||||| |||| |||  |||||||||||||||||||| ||     
T  4205116 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacaccccactgtttgtacaatga 4205215  T
Q  318 catcaa 323  Q
    ||||||    
T  4205216 catcaa 4205221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 311
Target Start/End: Complemental strand, 34361702 - 34361609
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgta 311  Q
    |||||||||||||||||| | || |||||||||||| | |  |||||||||||||| ||| |||| |||  |||| ||||||||||||||||||    
T  34361702 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgta 34361609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 37775670 - 37775775
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    |||||||||| |||||| | || | ||||| |||| | |  |||||| |||||||  || |||| ||||||||| |||||||||||||||||||||||||    
T  37775670 gaaaattctacggtgaagtcattaaaatgatttttttggtgaagttagcactataatattaaaaatgttgtgagtaacaccccactgtttgtacagtggc 37775769  T
Q  319 atcaaa 324  Q
    ||||||    
T  37775770 atcaaa 37775775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 50764787 - 50764860
Alignment:
Q  275 catcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||| |  ||||||||||||||    
T  50764787 catcaaaagtgttgtgagtaacaccccactgtttgtacggtgacatcaaaagttcaatcctcatagtatcatca 50764860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 37663950 - 37663822
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | || |||||||||||| |    ||||||||||||   ||| |||| |||  |||| |||||||||||||||||||| ||     
T  37663950 ggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacactaa--cattaaaactgtaatgagtaacaccccactgtttgtacaatga 37663853  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  37663852 catcaaaagttcagtcctcatagtatcatca 37663822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 7152317 - 7152235
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccc 300  Q
    |||||||||||||||||| | |||  |||||||||||| | |||||||||| |||| |||||||||| | ||||| |||||||    
T  7152317 ggaaaattctatggtgaagtcatgctaatgacttttctggtaaagttaacattataacatcaaaagtatagtgagtaacaccc 7152235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 55478106 - 55477972
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgt----ttgtaca 313  Q
    |||||||||||||||||| | |||||||||| |||| | |  |||||||||||||| |||||||| |||   ||| ||||| |||||||    |||||||    
T  55478106 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttgtaca 55478007  T
Q  314 gtggcatc-aaagttcagttgtcatagtatcatca 347  Q
     || |||| ||||||||||  ||||||||||||||    
T  55478006 atgacatcaaaagttcagtcctcatagtatcatca 55477972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 5048174 - 5048046
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    ||||||||||  |||| |||||||||||| |||||| |  |||| ||| ||||| |||||||||||| ||||| |  ||| ||||||||||||  ||  |    
T  5048174 aaaattctataatgaagttatgagaatgatttttctggtgaagtcaactctataacatcaaaagtgtagtgagtaggaccacactgtttgtacgatgata 5048075  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || |||||||||||  |||||||||||||    
T  5048074 tcaaaagttcagttcccatagtatcatca 5048046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 32579444 - 32579536
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgt 310  Q
    |||||||| ||||||||| || |||||||||||||||| |  |||| |||| |||| |||||||||||  ||||| | ||||||| |||||||    
T  32579444 ggaaaattttatggtgaagttctgagaatgacttttctggtgaagtcaacattataacatcaaaagtgcagtgagtagcaccccagtgtttgt 32579536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 32592135 - 32592199
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    |||||||||||| || ||||||||||||| ||| ||||| |||||||||||| |||| |||||||    
T  32592135 aagttaacactacagtatcaaaagtgttgagagtaacactccactgtttgtatagtgacatcaaa 32592199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 17272011 - 17272077
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagt 284  Q
    |||||||||||||||||| |  || ||||||||||||| |  |||||||||||||| ||||||||||    
T  17272011 ggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagt 17272077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 32912791 - 32912709
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccc 300  Q
    |||||||||||||||||| | || |||||||||||| | |  |||||||||||||| |||||||| |||  |||| |||||||    
T  32912791 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccc 32912709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 347
Target Start/End: Complemental strand, 33816723 - 33816614
Alignment:
Q  239 atgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcat 337  Q
    |||||||||| |||||| |  |||| |||| | ||||||||||||||| ||||| | |||| |||| ||| ||| |||||||| ||||||||||   |||    
T  33816723 atgagaatgatttttctggtgaagtcaacattgtagcatcaaaagtgtagtgagtagcacctcactatttatacggtggcatcaaaagttcagtctccat 33816624  T
Q  338 agtatcatca 347  Q
    ||||||||||    
T  33816623 agtatcatca 33816614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 4396326 - 4396418
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgt 310  Q
    |||||||||||| ||||| | || | |||||||||| |||  |||||||||||||| ||| |||| |||  |||| |||||||||| ||||||    
T  4396326 ggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgt 4396418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 19440769 - 19440729
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  19440769 tgtacaatggcatcaaaagttcagtcctcataatatcatca 19440729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 324
Target Start/End: Complemental strand, 23518472 - 23518408
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    |||||||||||||| ||| |||| ||| ||||  ||||||||||||||  |||||||||||||||    
T  23518472 aagttaacactataacattaaaactgtagtgactaacaccccactgttaatacagtggcatcaaa 23518408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 29584321 - 29584281
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  29584321 tgtacaatggcatcaaaagttcagtcttcatagtatcatca 29584281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 37663862 - 37663822
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  37663862 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 37663822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 55478012 - 55477972
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  55478012 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 55477972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 38812308 - 38812271
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttct 255  Q
    |||||||||||||||||| | |||||||||||||||||    
T  38812308 ggaaaattctatggtgaagtcatgagaatgacttttct 38812271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 4934323 - 4934283
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||| | |||||||||||||||    
T  4934323 tgtacactggcatcaaaagttcaatcctcatagtatcatca 4934283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 6864125 - 6864165
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||| ||||||||||| |||| |||||||||||||||    
T  6864125 tgtacaatagcatcaaaagtccagtcctcatagtatcatca 6864165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 19089574 - 19089534
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||| |||| ||||||||||||||| |||||||||||||||    
T  19089574 tgtataatgacatcaaaagttcagtcctcatagtatcatca 19089534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 20097537 - 20097485
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactat 272  Q
    |||||||||||||||| | ||||||||||||||||| |  |||||||| ||||    
T  20097537 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaaccctat 20097485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 25701178 - 25701138
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| || ||||||||||||||| |||||||||||||||    
T  25701178 tgtacagtgacatcaaaagttcagtcctcatagtatcatca 25701138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 49376057 - 49376097
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  49376057 tgtacagtggcatcaaaagttcagtcttcatagtatcatca 49376097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 55241225 - 55241185
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||||| | |||||||||||||    
T  55241225 tgtacagtggcatcaaaagttcagtccccatagtatcatca 55241185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 38643977 - 38644107
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||||| ||||||||||||||| | |  |||||||||||||| |||||||||||||||||| |||||||||||||||||  |||||    
T  38643977 ggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 38644076  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||   |||||||||||||    
T  38644077 catcaaaagttcagtctccatagtatcatca 38644107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 27083029 - 27082899
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | || ||| |||||||||| |  ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  27083029 ggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccccactgtttgtgcagtgg 27082930  T
Q  318 ca-tcaaagttcagttgtcatagtatcatca 347  Q
    || | ||||||||||  ||||||||||||||    
T  27082929 cattaaaagttcagtcctcatagtatcatca 27082899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 347
Target Start/End: Complemental strand, 5300138 - 5300007
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| | ||||||||||||||| ||   |||||||||||||||||||||||||||||| || | ||| | |||||||||||||||    
T  5300138 tggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaagtgttgtaagtagcactctactgtttgtacagtg 5300039  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||| ||||||||||  | ||||||||||||    
T  5300038 gcatcaaaagttcagtccttatagtatcatca 5300007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 13307621 - 13307728
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| | |||||||||| |||||| |  |||||||||||||| |||||||||||||||||| |||||| |||| |||||||||||    
T  13307621 tggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctcactatttgtacagtg 13307720  T
Q  317 gcatcaaa 324  Q
     |||||||    
T  13307721 acatcaaa 13307728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 16447066 - 16446960
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| ||||||||||||   ||||||||||||||| |||||||| ||| ||||| |||||||||||||||||| | |||    
T  16447066 ggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtataatgg 16446967  T
Q  318 catcaaa 324  Q
    |||||||    
T  16446966 catcaaa 16446960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 465843 - 465947
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||| ||||||||| | || | |||||||||| | |  |||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggca 465942  T
Q  320 tcaaa 324  Q
    |||||    
T  465943 tcaaa 465947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 308
Target Start/End: Original strand, 33906221 - 33906313
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgttt 308  Q
    |||||||||||||||||||||||||||||||||||||||| |  |||| |||||||||| || |||||||| ||||| | |||||||||||||    
T  33906221 atggaaaattctatggtgaaattatgagaatgacttttctggtgaagtcaacactatagtattaaaagtgtagtgagtagcaccccactgttt 33906313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 34894966 - 34895096
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| ||||||||||||    |||||||||||||| |||||| | ||| ||||| ||||| |||||||||||| |||||    
T  34894966 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagtgg 34895065  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||| ||||||||    
T  34895066 catcaaaagttcagtcatcatactatcatca 34895096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 34952222 - 34952116
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||| || || | || | |||||||||||| |  |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||     
T  34952222 ggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagcccactgtttgtacagtga 34952123  T
Q  318 catcaaa 324  Q
    |||||||    
T  34952122 catcaaa 34952116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 36695157 - 36695027
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | | || ||||||||||||    ||||||||||||||  ||||||| ||||||||| |||||||||||||||||||| ||     
T  36695157 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatga 36695058  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||   |||||||||||||    
T  36695057 catcaaaagttcagtccccatagtatcatca 36695027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 6098712 - 6098603
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    ||||||||||||||||||||| | |||| ||| |||||| | |  ||||||| ||||||||||||||| | | ||||| |||||||||||||||||||||    
T  6098712 aatggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacaccccactgtttgtacag 6098613  T
Q  315 tggcatcaaa 324  Q
    || |||||||    
T  6098612 tgacatcaaa 6098603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 232 - 347
Target Start/End: Original strand, 11727037 - 11727153
Alignment:
Q  232 tgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcag 330  Q
    |||| |||||||||||| |||| | |  |||||||||||||| ||||||||||||||| || ||||||||||| |||||| ||||||||| |||||||||    
T  11727037 tgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaagtgttgtaagtaacaccccactatttgtatagtggcatcaaaagttcag 11727136  T
Q  331 ttgtcatagtatcatca 347  Q
    |  ||||| ||||||||    
T  11727137 tcctcataatatcatca 11727153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 224 - 347
Target Start/End: Complemental strand, 37970704 - 37970580
Alignment:
Q  224 ttctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-a 322  Q
    |||||||||||| | ||||||||||||||| | |  |||||||||||||| |||||||| |||  |||| |||||||||||||||||||| || |||| |    
T  37970704 ttctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgccatcaa 37970605  T
Q  323 aagttcagttgtcatagtatcatca 347  Q
    ||||||||   ||||||||||||||    
T  37970604 aagttcagccctcatagtatcatca 37970580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 1204926 - 1205056
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| || |||||| | ||||||||||||||||| |  |||||||||||||| ||| |||| ||| ||||| |||||  ||||||||||||| ||     
T  1204926 ggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgtagtgagtaacacatcactgtttgtacaatga 1205025  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  1205026 catcaaaagttcagtcctcatagtatcatca 1205056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 347
Target Start/End: Complemental strand, 10555394 - 10555263
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    |||||||||||| |||||| | ||||||||||||||| | |  |||||||||||||| ||| |||| |||  |||| ||||| |||||||||||||| ||    
T  10555394 tggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacactccactgtttgtacaatg 10555295  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
     |||| |||||||| |  ||||||||||||||    
T  10555294 acatcaaaagttcaatcctcatagtatcatca 10555263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 347
Target Start/End: Original strand, 12876107 - 12876238
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    |||||||||||||||| || | | || ||||||||||||    ||||||||||||||  || |||| ||||||||| ||||||| |||||||||||| ||    
T  12876107 tggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacccaactgtttgtacaatg 12876206  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
     |||| ||||||||||  ||||||||||||||    
T  12876207 acatcaaaagttcagtcctcatagtatcatca 12876238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 1150296 - 1150166
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | || |||||||||||| | |  |||||||| ||||| |||||||| |||  |||| |||| |||||||||||||||  |     
T  1150296 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatcccactgtttgtacaacga 1150197  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  1150196 catcaaaagttcagtcatcatagtatcatca 1150166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 43643786 - 43643656
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||||||||||| || | |  |||||||||||||| |||||||| |||  |||| ||||| | |||||||||||| ||     
T  43643786 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatga 43643687  T
Q  318 cat-caaagttcagttgtcatagtatcatca 347  Q
    ||| ||||||||| |  ||||||||||||||    
T  43643686 catccaaagttcaatcttcatagtatcatca 43643656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 347
Target Start/End: Complemental strand, 23854624 - 23854492
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||| |||| |||||| | ||||||||||||||| | |  |||||||||||||| ||| |||| |||  |||| ||||||| ||||||||| || |    
T  23854624 atggaaaagtctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacccaactgtttgtgcaat 23854525  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    | |||| ||||||||||  ||||||||||||||    
T  23854524 gacatcaaaagttcagtcctcatagtatcatca 23854492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 40862418 - 40862525
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaag-tgttgtgaggaacaccccactgtttgtacagtg 316  Q
    |||||||||||| ||||| | | || ||| |||||||| |  ||||||||||||||  |||||||  ||||||||| |||||||||||||||||||| ||    
T  40862418 ggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaatgttgtgagtaacaccccactgtttgtacaatg 40862517  T
Q  317 gcatcaaa 324  Q
    ||||||||    
T  40862518 gcatcaaa 40862525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 41362517 - 41362644
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| |||||| |||||||||| | |  ||||||||||  |||||| |||| ||| ||||| ||||||||||| |||||| ||||     
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaacac--tagcat-aaaaatgtagtgagtaacaccccactatttgtatagtga 41362613  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| |||||||||   ||||||||||||||    
T  41362614 catcaaaagttcagacctcatagtatcatca 41362644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 9864147 - 9864253
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||||  |||| | | || |||||||||| | |  || |||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||     
T  9864147 ggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaatga 9864246  T
Q  318 catcaaa 324  Q
    |||||||    
T  9864247 catcaaa 9864253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 16222862 - 16222992
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||| |||||||| ||||||||||||||||| |  || ||||||||||| ||| |||| | | ||||| |   |||||| ||||||||| ||     
T  16222862 ggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaatatagtgagtagttccccacagtttgtacaatga 16222961  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  16222962 catcaaaagttcagtcctcatagtatcatca 16222992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 7891145 - 7891075
Alignment:
Q  212 ttcaatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaa 282  Q
    ||||||| |||||||||||||||| | ||||||||||||||| | |  |||||||||||||| ||||||||    
T  7891145 ttcaatgaaaaattctatggtgaagtcatgagaatgactttttttgtgaagttaacactataacatcaaaa 7891075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 347
Target Start/End: Original strand, 44869485 - 44869626
Alignment:
Q  208 ttaattcaatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaag--tgttgtgaggaacaccccactg 305  Q
    ||||||||  ||||||||||| ||||||||||| ||||| |||||| | |  |||||||||||||| ||| |||||  | |||||||  |  ||||||||    
T  44869485 ttaattcatgggaaaattctacggtgaaattataagaataacttttttggtgaagttaacactataacattaaaagtattttgtgagtga-tccccactg 44869583  T
Q  306 tttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||| || |||| |||||||| | |||||||||||||||    
T  44869584 tttgcacaatgacatcaaaagttcaatcgtcatagtatcatca 44869626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 1205016 - 1205057
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatcag 405  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  1205016 tgtacaatgacatcaaaagttcagtcctcatagtatcatcag 1205057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 15009240 - 15009305
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaa 282  Q
    ||||||||||||||||||| | || |||||||||||| | |  |||||||||||||| ||||||||    
T  15009240 tggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaa 15009305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 24823463 - 24823394
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgtt 287  Q
    ||||||| ||||||| || ||||||||||||||||| | |  ||||||||||||||  ||||||||||||    
T  24823463 ggaaaatactatggtaaagttatgagaatgacttttttggtgaagttaacactataatatcaaaagtgtt 24823394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 12876198 - 12876238
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  12876198 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 12876238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 16222952 - 16222992
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  16222952 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 16222992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 348
Target Start/End: Complemental strand, 30654774 - 30654643
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| ||||||||| | || ||| ||| |||| | |  |||||||||||||| ||| |||| |||  |||| |||||||||||||||||  | ||     
T  30654774 ggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgttgaatga 30654675  T
Q  318 catc-aaagttcagttgtcatagtatcatcac 348  Q
    |||| |||||||||   |||||||||||||||    
T  30654674 catcaaaagttcagccttcatagtatcatcac 30654643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 33197890 - 33197957
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagt 284  Q
    ||||||||||||||||||| | |||||||| | ||||||    ||||||| |||||||||||||||||    
T  33197890 tggaaaattctatggtgaagtcatgagaataatttttctgattaagttaatactatagcatcaaaagt 33197957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 1954146 - 1954108
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttct 255  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  1954146 tggaaaattctatggtgaagttatgataatgacttttct 1954108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 35459888 - 35459834
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactata 273  Q
    ||||||||||||||||| | ||||||||||||||| | | |||||||| ||||||    
T  35459888 gaaaattctatggtgaagtcatgagaatgacttttttcgtaaagttaatactata 35459834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 7998362 - 7998399
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttct 255  Q
    |||||||||||||||||| | |||||||||||||||||    
T  7998362 ggaaaattctatggtgaagtcatgagaatgacttttct 7998399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 347
Target Start/End: Complemental strand, 31934076 - 31933947
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||||||  ||||| |||||||||||| |||| | |  |||||||||||||   ||||||| | |  |||| ||||||||||| ||| |||| || |    
T  31934076 gaaaattctaacgtgaagttatgagaatgatttttttggtgaagttaacactatgatatcaaaaatataatgagtaacaccccactctttatacaatgac 31933977  T
Q  319 atc-aaagttcagttgtcatagtatcatca 347  Q
    ||| ||||||||||  | ||||||||||||    
T  31933976 atcaaaagttcagtcattatagtatcatca 31933947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 39099300 - 39099263
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttct 255  Q
    |||||||||||||||||| | |||||||||||||||||    
T  39099300 ggaaaattctatggtgaagtcatgagaatgacttttct 39099263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 1149733 - 1149693
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| |||||||||||| || |||||||||||||||    
T  1149733 tgtacaatgacatcaaaagttctgtcctcatagtatcatca 1149693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 5300047 - 5300007
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||||| || ||||||||||||    
T  5300047 tgtacagtggcatcaaaagttcagtccttatagtatcatca 5300007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 7891058 - 7891018
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||||||| || |||||| ||||||||    
T  7891058 tgtacaatggcatcaaaagttcggtcctcataatatcatca 7891018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 10555303 - 10555263
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||| | |||||||||||||||    
T  10555303 tgtacaatgacatcaaaagttcaatcctcatagtatcatca 10555263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 404
Target Start/End: Complemental strand, 23854528 - 23854492
Alignment:
Q  368 caatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  23854528 caatgacatcaaaagttcagtcctcatagtatcatca 23854492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 36695067 - 36695027
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| | |||||||||||||    
T  36695067 tgtacaatgacatcaaaagttcagtccccatagtatcatca 36695027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 37970620 - 37970580
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||  |||||||||||||||    
T  37970620 tgtacaatgccatcaaaagttcagccctcatagtatcatca 37970580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 40862509 - 40862548
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  40862509 tgtacaatggcatcaaaagttcag-tctcatggtatcatca 40862548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 1547283 - 1547413
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | ||||||||||||||||| |  |||||||||||||| ||| |||| ||||||||| ||||| ||||||||||| ||||||    
T  1547283 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaacactccactgtttgtgcagtgg 1547382  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||| ||||||||||||||    
T  1547383 catcaaaagttcagttctcatagtatcatca 1547413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 3309141 - 3309273
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    |||||||||||||||||| || | ||||||||||||||||| | ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  3309141 aatggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaaca-cccactgtttgtacag 3309239  T
Q  315 tggcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||| ||| |||||||| |  ||||||||||||||    
T  3309240 tggtatcaaaagttcaatcttcatagtatcatca 3309273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 38823209 - 38823316
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| | ||||||||||||||||| |  ||||||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||    
T  38823209 tggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaattgttgcgagtaacaccccactatttgtacagtg 38823308  T
Q  317 gcatcaaa 324  Q
     |||||||    
T  38823309 tcatcaaa 38823316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 39393370 - 39393485
Alignment:
Q  209 taattcaatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgttt 308  Q
    ||||| || ||||||||||| |||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||||| || ||  || |||||    
T  39393370 taatttaaaggaaaattctacggtgaagttatgagaatgacttttctaatgaagttaacactatagcatcaaaagtgttgtgagtaatacttcattgttt 39393469  T
Q  309 gtacagtggcatcaaa 324  Q
    ||||||||||||||||    
T  39393470 gtacagtggcatcaaa 39393485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 16415641 - 16415772
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccc-cactgtttgtacagtg 316  Q
    ||||||||||| |||||| | ||||||||||||||||| |  ||||||||||||||||||||||||||| ||||| |||||||  | |||||||||||||    
T  16415641 ggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtacagtg 16415740  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||| |||||||||   ||||||||||||||    
T  16415741 gcatcaaaagttcagccatcatagtatcatca 16415772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 11742530 - 11742424
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| ||| ||||| ||||||||||||||||||| |  ||||||||||||||  |||||||||||||| || |||||||||||||||||||||||     
T  11742530 ggaaaattttatcgtgaagttatgagaatgacttttctggtgaagttaacactatattatcaaaagtgttgtaagtaacaccccactgtttgtacagtga 11742431  T
Q  318 catcaaa 324  Q
    |||||||    
T  11742430 catcaaa 11742424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 48620633 - 48620739
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||||| |||| |||| | |||||||||||| |  ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||     
T  48620633 ggaaaattctatgttgaagttattaaaatgacttttcttgtgaagttaacaatataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtga 48620732  T
Q  318 catcaaa 324  Q
    |||||||    
T  48620733 catcaaa 48620739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 229 - 347
Target Start/End: Original strand, 47279196 - 47279315
Alignment:
Q  229 tggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagtt 327  Q
    ||||||| | |||||||||| |||| | |  ||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  47279196 tggtgaagtcatgagaatgatttttttggtgaagttaacattatactatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcgaaagtt 47279295  T
Q  328 cagttgtcatagtatcatca 347  Q
    ||||  ||||||||||||||    
T  47279296 cagtcctcatagtatcatca 47279315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 324
Target Start/End: Complemental strand, 27533155 - 27533054
Alignment:
Q  223 attctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatca 322  Q
    |||||||| | || ||||||||||||||||||| |  ||||||||||||||||||||||||| ||||| | |||| |||||| |||||||||||||||||    
T  27533155 attctatgataaagttatgagaatgacttttctggtgaagttaacactatagcatcaaaagtattgtgggtaacaacccactctttgtacagtggcatca 27533056  T
Q  323 aa 324  Q
    ||    
T  27533055 aa 27533054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 15752027 - 15752155
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| | ||||||||||||||| | |  |||||||||||||| ||| |||| | | ||||| |||||| ||||||||||||| |||||    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctcactgtttgtacaatggca 15752126  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || ||||||||||  ||||||||||||||    
T  15752127 tcaaaagttcagtcctcatagtatcatca 15752155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 2959744 - 2959874
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| ||||||||||||    |||||||||||||| |||||||| ||| || || |||| ||||||||||||||||||     
T  2959744 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatcccactgtttgtacagtga 2959843  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||| ||||||    
T  2959844 catcaaaagttcagtcctcatagtgtcatca 2959874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 347
Target Start/End: Original strand, 4330288 - 4330407
Alignment:
Q  231 gtgaaattatgagaatgacttttct-aggaaagttaacactatagcatcaaaagtgttgtgaggaaca-ccccactgtttgtacagtggcatc-aaagtt 327  Q
    ||||| ||||||||||||||||||| | |||  | |||||||||||||||||||||| ||||| |||| ||||| |||||||||||||| ||| ||||||    
T  4330288 gtgaagttatgagaatgacttttctgatgaagataaacactatagcatcaaaagtgtagtgagtaacacccccaatgtttgtacagtgggatcaaaagtt 4330387  T
Q  328 cagttgtcatagtatcatca 347  Q
    ||||  ||||||||||||||    
T  4330388 cagtcatcatagtatcatca 4330407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 324
Target Start/End: Complemental strand, 31621734 - 31621627
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    |||||||||||| |||||| | |||||||||||||||||||  |||| ||||||||| ||||||| ||||  |||| | |||||| || ||||||| |||    
T  31621734 tggaaaattctacggtgaagtcatgagaatgacttttctagtgaagtcaacactataacatcaaaggtgtattgagtagcaccccgctatttgtacggtg 31621635  T
Q  317 gcatcaaa 324  Q
    ||||||||    
T  31621634 gcatcaaa 31621627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 3534928 - 3535034
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||||  |||| | || ||||| | ||||||||  |||||||||||||| |||||||||||||||||| ||||||  ||||||||| |||||     
T  3534928 ggaaaattctattatgaagtcattagaattaattttctagtgaagttaacactataacatcaaaagtgttgtgagtaacaccttactgtttgtgcagtga 3535027  T
Q  318 catcaaa 324  Q
    |||||||    
T  3535028 catcaaa 3535034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 15168085 - 15168179
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtac 312  Q
    |||||||||||| ||||| | |||||||||  |||||| |  |||| |||||||||||||||||||||| ||||| | |||||||||||||||||    
T  15168085 ggaaaattctatcgtgaagtgatgagaatgctttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttgtac 15168179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 34012557 - 34012427
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| |||||| ||| |    |||||||||||||| |||||| | ||| ||||| ||||| |||||||||||| |||||    
T  34012557 ggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagtgg 34012458  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||| ||||||||    
T  34012457 catcaaaagttcagtcatcatactatcatca 34012427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 347
Target Start/End: Original strand, 10922724 - 10922853
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||| ||||||||||| |||||||||| |||| | |  |||||||||||||| ||| |||| |||  |||| || ||||||||||||||||| || |    
T  10922724 gaaaattttatggtgaaatcatgagaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaagaccccactgtttgtacaatgac 10922823  T
Q  319 atc-aaagttcagttgtcatagtatcatca 347  Q
    ||| |||||||| |  ||||||||||||||    
T  10922824 atcaaaagttcaatcctcatagtatcatca 10922853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 14758038 - 14758143
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||| || |||||| | ||||||||||||||||| |  |||| ||||||||| |||||||||||| ||||| | ||| | ||||||||||| |||||    
T  14758038 gaaaattttacggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcacacaactgtttgtacggtggc 14758137  T
Q  319 atcaaa 324  Q
    ||||||    
T  14758138 atcaaa 14758143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 37619076 - 37618949
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgag--gaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||| |||| |||||||||||| | |  |||||||||||||| |||||||| | |  ||||   |||||||||||||||||| | |    
T  37619076 ggaaaattctatggtgaagttataagaatgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaaaat 37618977  T
Q  316 ggcatc-aaagttcagttgtcatagtat 342  Q
    | |||| ||||||||||| |||||||||    
T  37618976 gacatcaaaagttcagttctcatagtat 37618949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 218 - 352
Target Start/End: Original strand, 32267030 - 32267165
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| ||||||||| | || |||||||||||| | |  ||||||||| |||| |||||||| |||  |||| |||||||||||||||||||| ||     
T  32267030 ggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatga 32267129  T
Q  318 catc-aaagttcagttgtcatagtatcatcacccca 352  Q
    |||| |||||||| |  ||||| |||||||| ||||    
T  32267130 catcaaaagttcactcctcatattatcatcaaccca 32267165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 10182188 - 10182062
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| |||||||||| | |  ||||||| ||| || ||| |||| | | ||| | ||||| ||||||||||||||||||    
T  10182188 ggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaacacgccactgtttgtacagtgg 10182089  T
Q  318 catc-aaagttcagttgtcatagtatc 343  Q
    |||| ||||||||||  ||||||||||    
T  10182088 catcaaaagttcagtcctcatagtatc 10182062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 15382929 - 15383059
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| |||| | |||||||||| | |  || ||||||||||| |||||||| |||  |||| |||| ||||| ||||||||| ||     
T  15382929 ggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatcccaccgtttgtacaatgt 15383028  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  || |||||||||||    
T  15383029 catcaaaagttcagtcatcgtagtatcatca 15383059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 22170750 - 22170816
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagt 284  Q
    |||||||||||||||||||| |||| |||||||||||||   |||||||||||||| ||||||||||    
T  22170750 ggaaaattctatggtgaaatcatgaaaatgacttttctaatgaagttaacactataacatcaaaagt 22170816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 347
Target Start/End: Complemental strand, 47682674 - 47682544
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacac-cccactgtttgtacagt 315  Q
    ||||||||| ||||||||| | |||||| |||||||| | |  ||||||||||  |||||| |||| ||||||||| ||||| ||||||| |||||||||    
T  47682674 tggaaaattttatggtgaagtcatgagagtgacttttttggtgaagttaacac--tagcataaaaaatgttgtgagtaacactcccactgcttgtacagt 47682577  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    || ||| |||||||| |  ||||||||||||||    
T  47682576 ggtatcaaaagttcattcctcatagtatcatca 47682544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 324
Target Start/End: Complemental strand, 9903192 - 9903128
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    |||||||||||||| |||||||| ||| ||||| |||||||| |||||||||||||| |||||||    
T  9903192 aagttaacactataacatcaaaactgtagtgagtaacaccccgctgtttgtacagtgacatcaaa 9903128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 347
Target Start/End: Original strand, 32216093 - 32216181
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||||||||| |||||||| ||| ||||| ||||| |||||||||||||| |||| || ||||||||||  || |||||||||||    
T  32216093 aagttaacactataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatggcgtcaaaagttcagtcctcgtagtatcatca 32216181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 331
Target Start/End: Original strand, 41926161 - 41926273
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| |||||| ||||| |||| |    ||||||| |||||| |||||||| | | ||||| || | |||||||||||||||||||||    
T  41926161 aaaattctatggtgaagttatgaaaatgatttttttgatgaagttaatactataacatcaaaaatatagtgagtaatatcccactgtttgtacagtggca 41926260  T
Q  320 tca-aagttcagt 331  Q
    ||| |||||||||    
T  41926261 tcacaagttcagt 41926273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 7079255 - 7079168
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccact 304  Q
    ||||||||| |||||| || | |||| |||||||||| | |  ||||||||||||||  ||||||||||||||||| |||||||||||    
T  7079255 tggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccact 7079168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 21289661 - 21289774
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaa-------aagtgttgtgaggaacaccccactgtttgt 310  Q
    |||||| ||||| ||||| | ||||||||||||||||| |  |||||||||||||| ||| ||       || ||| ||||| |||||||||||||||||    
T  21289661 ggaaaaatctattgtgaagtcatgagaatgacttttctggtgaagttaacactatatcataaataataaaaaatgtagtgagtaacaccccactgtttgt 21289760  T
Q  311 acagtggcatcaaa 324  Q
    ||||||||||||||    
T  21289761 acagtggcatcaaa 21289774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 366 - 404
Target Start/End: Original strand, 8222216 - 8222254
Alignment:
Q  366 tacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8222216 tacaatggcatcaaaagttcagttctcatagtatcatca 8222254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 18422647 - 18422777
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | || | |||||||||| | |  |||||||||||||| |||||||| | |   ||| |||||||||| ||||||||| ||     
T  18422647 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacaccccaccgtttgtacaatga 18422746  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||| ||||||||    
T  18422747 catcaaaagttcagtcctcataatatcatca 18422777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 347
Target Start/End: Complemental strand, 27267378 - 27267249
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||| |||| |||| | |||||||||| |||| | |  ||||||||||||  |||| |||| ||| |||||  |||||||||||||||||||||    
T  27267378 atggaaaattatatg-tgaagtcatgagaatgatttttttggtgaagttaacacta--gcataaaaaatgtagtgagtgacaccccactgtttgtacagt 27267282  T
Q  316 ggca-tcaaagttcagttgtcatagtatcatca 347  Q
    |||| | ||||||||||   |||||||||||||    
T  27267281 ggcattaaaagttcagtctccatagtatcatca 27267249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 8222127 - 8222254
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||| |||||| | || | |||||| ||| |||  |||||||||||||| |||||||| |||  |||| |||||| ||| ||   |||| |||    
T  8222127 ggaaaattctacggtgaagtcataaaaatgacctttttagtgaagttaacactataacatcaaaaatgtaatgagtaacaccacaccgt---tacaatgg 8222223  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||| ||||||||||||||    
T  8222224 catcaaaagttcagttctcatagtatcatca 8222254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 15752115 - 15752155
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  15752115 tgtacaatggcatcaaaagttcagtcctcatagtatcatca 15752155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 25160718 - 25160758
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  25160718 tgtacaatggcatcaaaagttcagtcctcatagtatcatca 25160758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 28564919 - 28564831
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||||||||| |||||||| |||  |||| ||||||  |||||||||||| || |||| ||||||||||  ||||||||||||||    
T  28564919 aagttaacactataacatcaaaaatgtaatgagtaacaccttactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatca 28564831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 33725778 - 33725650
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    ||||||||||||| || | | |||||||||||||||||  |||| ||| ||||| ||||||||||||  |||| | || |||||| ||| |   ||||||    
T  33725778 aaaattctatggtaaagtcaagagaatgacttttctagtgaagtcaacgctatatcatcaaaagtgtattgagtagcagcccactatttctttggtggca 33725679  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || ||||||||||  ||||||||||||||    
T  33725678 tcaaaagttcagtcctcatagtatcatca 33725650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 40884851 - 40884915
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    |||| ||||| ||| |||||||||||| ||||| | ||||||||||||||||| |||||||||||    
T  40884851 aagtcaacaccataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtggcatcaaa 40884915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 324
Target Start/End: Original strand, 42721033 - 42721141
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||||| | |||| ||||| |||| | |  |||||| | ||||| ||| |||| | | ||||| ||||||||||||||||||||||    
T  42721033 atggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacaccccactgtttgtacagt 42721132  T
Q  316 ggcatcaaa 324  Q
      |||||||    
T  42721133 aacatcaaa 42721141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 347
Target Start/End: Complemental strand, 30327133 - 30327002
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||| ||||| | || | |||||||||| | |  || ||||||||||| |||||||| |||  |||| || |||| || ||||||||| |     
T  30327133 tggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacccaaccgtttgtacaata 30327034  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||| ||||||||||  ||||||||||||||    
T  30327033 gcatcaaaagttcagtcatcatagtatcatca 30327002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 405
Target Start/End: Original strand, 1547380 - 1547414
Alignment:
Q  371 tggcatcaaaagttcagttctcatagtatcatcag 405  Q
    |||||||||||||||||||||||||||||||||||    
T  1547380 tggcatcaaaagttcagttctcatagtatcatcag 1547414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 19899949 - 19899843
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | || | ||||| |||| | |  |||||||||||||| |||||||| |||   ||| |||||| ||||||||||| | |||    
T  19899949 ggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctcactgtttgtagaatgg 19899850  T
Q  318 catcaaa 324  Q
    |||||||    
T  19899849 catcaaa 19899843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 347
Target Start/End: Complemental strand, 27227659 - 27227535
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||||| | |||||||||| |||| | |  ||||||||||||  |||| |||| |||  |      |||| |||||||||||||||    
T  27227659 atggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacacta--gcataaaaaatgtact------cacctcactgtttgtacagt 27227568  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||| ||||||||||  ||||||||||||||    
T  27227567 ggcatcaaaagttcagtcctcatagtatcatca 27227535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 30254420 - 30254549
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| |||| |||||||||||| |    ||||||||| |||| |||||||| |||  |||| || | | ||||||||||||| ||     
T  30254420 ggaaaattctatggtgaagttataagaatgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaata-cacactgtttgtacaatga 30254518  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||| ||||||||||    
T  30254519 catcaaaagttcagtcctcaaagtatcatca 30254549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 43579241 - 43579290
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaa 266  Q
    ||||||||||||||||||| | |||||||||||||||||||  |||||||    
T  43579241 tggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaa 43579290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 27227575 - 27227535
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  27227575 tgtacagtggcatcaaaagttcagtcctcatagtatcatca 27227535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 28564871 - 28564831
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  28564871 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 28564831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 28769651 - 28769778
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| | || | ||| |||||| | |  |||||||||||||  |||||||| |||  |||| ||||||| || ||||||||| |||||    
T  28769651 aaaattctatggtgaagtcataaaaataactttttttgtgaagttaacactatgacatcaaaaatgtaatgagtaacaccc-accgtttgtacaatggca 28769749  T
Q  320 tcaaa-gttcagttgtcatagtatcatca 347  Q
    ||||| |||| ||  ||||||||||||||    
T  28769750 tcaaaggttcggtcctcatagtatcatca 28769778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 332
Target Start/End: Complemental strand, 27564084 - 27563970
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttct-aggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||||| |||||| |||||| ||||| |||| | ||  |||||||||||||| | | |||| | | ||||| ||||| |||||||||||| |||| |    
T  27564084 aaaattctacggtgaagttatgaaaatgattttttttagtgaagttaacactataactttaaaaatatagtgagtaacactccactgtttgtatagtgac 27563985  T
Q  319 atc-aaagttcagtt 332  Q
    ||| |||||||||||    
T  27563984 atcaaaagttcagtt 27563970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 46931401 - 46931513
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttcta---ggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgta 311  Q
    |||| |||||||||||||||| |||| ||||||| |||| |    |  |||||||||||||| |||||||| |||  |||| || |||||||||||||||    
T  46931401 aatgaaaaattctatggtgaagttataagaatgaattttttttttgtgaagttaacactataacatcaaaaatgtaatgagtaataccccactgtttgta 46931500  T
Q  312 cagtggcatcaaa 324  Q
     |  |||||||||    
T  46931501 gaacggcatcaaa 46931513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 238650 - 238566
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatca 344  Q
    ||||||||||||||| || |||| ||||||||| ||||  |||||||||||||| || |||| ||||||||||   ||||||||||    
T  238650 aagttaacactatagtattaaaaatgttgtgagtaaca-tccactgtttgtacaatgacatcaaaagttcagtccccatagtatca 238566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 404
Target Start/End: Complemental strand, 33725683 - 33725650
Alignment:
Q  371 tggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||| |||||||||||||||    
T  33725683 tggcatcaaaagttcagtcctcatagtatcatca 33725650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 51128884 - 51128985
Alignment:
Q  247 gacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcat 345  Q
    ||||||| |||  |||||||||||||| ||| |||| |||  |||| ||||| |||| ||||||||| || |||| ||||||||||  | ||||||||||    
T  51128884 gacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagttcagtcattatagtatcat 51128983  T
Q  346 ca 347  Q
    ||    
T  51128984 ca 51128985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 7079153 - 7079113
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| |||||||||||||||  ||||||||||||||    
T  7079153 tgtacaatgacatcaaaagttcagtcatcatagtatcatca 7079113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 10182098 - 10182062
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatc 400  Q
    |||||| |||||||||||||||||| |||||||||||    
T  10182098 tgtacagtggcatcaaaagttcagtcctcatagtatc 10182062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 10922813 - 10922853
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||| | |||||||||||||||    
T  10922813 tgtacaatgacatcaaaagttcaatcctcatagtatcatca 10922853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 18422737 - 18422777
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||| ||||||||    
T  18422737 tgtacaatgacatcaaaagttcagtcctcataatatcatca 18422777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 28769738 - 28769778
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||||||||| |||| || |||||||||||||||    
T  28769738 tgtacaatggcatcaaaggttcggtcctcatagtatcatca 28769778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 30254509 - 30254549
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||| ||||||||||    
T  30254509 tgtacaatgacatcaaaagttcagtcctcaaagtatcatca 30254549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 30327042 - 30327002
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||| ||||||||||||||||  ||||||||||||||    
T  30327042 tgtacaatagcatcaaaagttcagtcatcatagtatcatca 30327002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 32216141 - 32216181
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||| ||||||||||||| ||| |||||||||||    
T  32216141 tgtacaatggcgtcaaaagttcagtcctcgtagtatcatca 32216181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 37451308 - 37451388
Alignment:
Q  244 aatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    |||||||||| | | ||||||||||||||| |||||||| |||  | || ||||||| || ||||||||| || |||||||    
T  37451308 aatgacttttttggtaaagttaacactataacatcaaaaatgtaataagtaacaccctaccgtttgtacaatgacatcaaa 37451388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 47279275 - 47279315
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| ||||||| |||||||||| |||||||||||||||    
T  47279275 tgtacagtggcatcgaaagttcagtcctcatagtatcatca 47279315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 8742062 - 8741931
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaaca-ccccactgtttgtacagtg 316  Q
    |||||||||||||||||| | ||||||||||||||||| |  ||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||    
T  8742062 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtacaatg 8741963  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||| ||||||||||   |||||||||||||    
T  8741962 gcatcaaaagttcagtctccatagtatcatca 8741931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 216 - 331
Target Start/End: Original strand, 15724488 - 15724603
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||||| ||||||||||||||||| | |  |||||||||||||| |||||||||| ||||||| ||||||||||||||| |||| |    
T  15724488 atggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaagttttgtgagtaacaccccactgtttatacaat 15724587  T
Q  316 ggcatcaaagttcagt 331  Q
    | ||||||||||||||    
T  15724588 gacatcaaagttcagt 15724603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 5837557 - 5837661
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    ||||||||| |||||| | ||||||||||||||||| |  ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  5837557 aaaattctacggtgaattcatgagaatgacttttctggtgaaggtaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgaca 5837656  T
Q  320 tcaaa 324  Q
    |||||    
T  5837657 tcaaa 5837661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 25501099 - 25500995
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| | ||||||||||||||||| | |||||||||||||||||||||||||||||||||  |||||| ||||||||||||| || ||    
T  25501099 aaaattctatggtgaagtcatgagaatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgaataacacctcactgtttgtacactgcca 25501000  T
Q  320 tcaaa 324  Q
    |||||    
T  25500999 tcaaa 25500995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 7693229 - 7693336
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||||||||||| | || | |||||||||||| |  |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  7693229 tggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgtttgtacagtg 7693328  T
Q  317 gcatcaaa 324  Q
    ||||||||    
T  7693329 gcatcaaa 7693336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 19119859 - 19119965
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | ||||||||||||||| | |  |||||||||||||||||||||||||||||  || |||||||||||||||||||||||     
T  19119859 ggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacaccccactgtttgtacagtga 19119958  T
Q  318 catcaaa 324  Q
    |||||||    
T  19119959 catcaaa 19119965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 345
Target Start/End: Original strand, 39572819 - 39572947
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||||||||||||||||||  ||||||| ||||||  || |||| ||||||||| ||||| ||||||||||| |||||     
T  39572819 ggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaacactccactgtttgtgcagtga 39572918  T
Q  318 catc-aaagttcagttgtcatagtatcat 345  Q
    |||| ||||||||||| ||||||||||||    
T  39572919 catcaaaagttcagttctcatagtatcat 39572947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 699147 - 699280
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    |||| |||||| ||||||||| |||||||||||||||||||    |||||||||||||||||| |||| | | ||||| |||||||||||||||||||||    
T  699147 aatgaaaaattttatggtgaagttatgagaatgacttttctgatgaagttaacactatagcataaaaaatctagtgagtaacaccccactgtttgtacag 699246  T
Q  315 tggcatc-aaagttcagttgtcatagtatcatca 347  Q
    || |||| ||||||||||  ||||| ||||||||    
T  699247 tgacatcaaaagttcagtcatcataatatcatca 699280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 22019631 - 22019738
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    |||||| |||||||||||| |||| |||||||||||||| |  ||||||| ||||||| ||||||||||||||||| ||||||||| |||||||| ||||    
T  22019631 tggaaatttctatggtgaagttattagaatgacttttctggtgaagttaaaactatagaatcaaaagtgttgtgagtaacaccccattgtttgtatagtg 22019730  T
Q  317 gcatcaaa 324  Q
     |||||||    
T  22019731 acatcaaa 22019738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 26268076 - 26268180
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||  ||||| | |||||||||| |||||| |  |||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||    
T  26268076 aaaattctacagtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttttgagtaacaccccactgtttgtacggtgaca 26268175  T
Q  320 tcaaa 324  Q
    |||||    
T  26268176 tcaaa 26268180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 27330306 - 27330434
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| |  || ||||||||||||| |  |||||||||||||| ||||||||||||  |||| ||||||  |||||||||||| |||    
T  27330306 ggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacaccttactgtttgtacaatgg 27330403  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  27330404 catcaaaagttcagtcttcatagtatcatca 27330434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 9200233 - 9200339
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| ||||||||| | || | ||| |||||||| |  |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||     
T  9200233 ggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccacagtttgtacagtga 9200332  T
Q  318 catcaaa 324  Q
    |||||||    
T  9200333 catcaaa 9200339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 40133382 - 40133491
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    ||||||||||||||||||||| | | || |||||||||| | |  ||||||||| ||||| ||||||| ||||||||| ||||||||||| ||||||||     
T  40133382 aatggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacaccccactatttgtacaa 40133481  T
Q  315 tggcatcaaa 324  Q
    ||||||||||    
T  40133482 tggcatcaaa 40133491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 347
Target Start/End: Complemental strand, 23116399 - 23116267
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||||  | |||| |||||||||| |    ||||||||| |||| |||||||| ||| ||||| | ||||||||||||||||||||    
T  23116399 atggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaactgtagtgagtagcaccccactgtttgtacagt 23116300  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    || ||| |||||||||||  |||||||||||||    
T  23116299 ggaatcaaaagttcagtttacatagtatcatca 23116267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 347
Target Start/End: Complemental strand, 31786823 - 31786691
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||| ||||| |  |||||||||||||| | |  |||||||||||||||||| |||| ||| ||||| |   ||||||||||||||||||    
T  31786823 atggaaaattctatagtgaagtagtgagaatgacttttttggtgaagttaacactatagcatgaaaaatgtagtgagcactgccccactgtttgtacagt 31786724  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||| |||||||| |  ||||||||||||||    
T  31786723 ggcatcaaaagttcaatcctcatagtatcatca 31786691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 208 - 324
Target Start/End: Original strand, 36866752 - 36866868
Alignment:
Q  208 ttaattcaatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtt 307  Q
    |||||| | ||||||||||||||||||| | | || ||||| |||||| |  ||||||||||||||  ||||||| | ||||||| ||||||||||||||    
T  36866752 ttaattaattggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacaccccactgtt 36866851  T
Q  308 tgtacagtggcatcaaa 324  Q
    |||||| ||||||||||    
T  36866852 tgtacaatggcatcaaa 36866868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 344
Target Start/End: Original strand, 36860423 - 36860550
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | | || ||||| |||||| |  ||||||||||||||| || |||| ||||||||| |||||||||||||||||||| ||     
T  36860423 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacaccccactgtttgtacaatga 36860522  T
Q  318 catc-aaagttcagttgtcatagtatca 344  Q
    |||| ||||||||||   ||||||||||    
T  36860523 catcaaaagttcagtccccatagtatca 36860550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 1429320 - 1429214
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||| ||||||||||| | |||| ||||||| || | |  ||||||||||||||||||||||| | | ||||| |||||||||||||||||||| |||    
T  1429320 ggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacaccccactgtttgtacactgg 1429221  T
Q  318 catcaaa 324  Q
    |||||||    
T  1429220 catcaaa 1429214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 5112488 - 5112358
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||| ||||||||| | |||| |||||||||| | |  ||||||| |||||| ||| |||| | | ||||| ||||||||||||||||||||||||    
T  5112488 ggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacaccccactgtttgtacagtgg 5112389  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||   |||||||||||||    
T  5112388 catcaaaagttcagtccccatagtatcatca 5112358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 30969499 - 30969369
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||   |||| | |||||||||| || ||| |  |||||||||||||| |||||||||||||||||| ||||||||||| ||| |||| ||     
T  30969499 ggaaaattctacaatgaagtcatgagaatgatttatctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttatacaatga 30969400  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  30969399 catcaaaagttcagtcctcatagtatcatca 30969369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 347
Target Start/End: Complemental strand, 14409504 - 14409372
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    ||||||||||||||||||||| | |||||||||| |||||| |  |||| ||||||||| |||||||| ||| ||||| | ||||||||| ||  ||| |    
T  14409504 aatggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactataacatcaaaaatgtagtgagtagcaccccactcttaatacgg 14409405  T
Q  315 tggcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||||| ||||||||| | ||||||||||||||    
T  14409404 tggcatcaaaagttcag-tctcatagtatcatca 14409372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 24886102 - 24886234
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctagga--aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||| ||||||||||| ||||||||||||||| |  |   ||||||| |||||| |||||||| |||  |||| |||||||||||||||||||| |    
T  24886102 ggaaaattttatggtgaaatcatgagaatgacttttttttggtgaagttaatactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaat 24886201  T
Q  316 ggcatc-aaagttcagttgtcatagtatcatca 347  Q
    | |||| ||||||||||  ||||||||||||||    
T  24886202 gacatcaaaagttcagtcctcatagtatcatca 24886234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 32563150 - 32563255
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||||||||||||| | || | ||||| ||||||    |||||||||||||| |||||||||||||||||| ||||| ||||||| ||||||||| |    
T  32563150 gaaaattctatggtgaagtcattaaaatgatttttctgatgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtctgtacagtgac 32563249  T
Q  319 atcaaa 324  Q
    ||||||    
T  32563250 atcaaa 32563255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 8466745 - 8466850
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||||| |||  | ||||||||||||||||| |  ||||||||||| || |||||||||||||||||  |||||||| || ||||||||||||    
T  8466745 ggaaaattctatgatgaggtcatgagaatgacttttctggtgaagttaacactgtaacatcaaaagtgttgtgaataacacccc-ctctttgtacagtgg 8466843  T
Q  318 catcaaa 324  Q
     ||||||    
T  8466844 tatcaaa 8466850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 22974257 - 22974127
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| |||||||||||| |||| | |  |||||||||||||| ||||||||  ||  |||| |||| ||||||||||||||| |      
T  22974257 ggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatcccactgtttgtacaataa 22974158  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| |||||||| || ||||| ||||||||    
T  22974157 catcaaaagttcaattctcatattatcatca 22974127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 347
Target Start/End: Original strand, 33908245 - 33908363
Alignment:
Q  230 ggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttc 328  Q
    |||||| | ||||||||||  ||||| |  |||| ||||||||| |||||||||||| ||||| | ||| ||||||||||||| |||||||| |||||||    
T  33908245 ggtgaagtcatgagaatgaactttctggtgaagtcaacactatatcatcaaaagtgtagtgagtagcactccactgtttgtacggtggcatcaaaagttc 33908344  T
Q  329 agttgtcatagtatcatca 347  Q
    |||  ||||||||||||||    
T  33908345 agtcctcatagtatcatca 33908363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 35826658 - 35826528
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| |||||||||| | |  ||||||| |||||| |||||||| |||  |||| |||||  || |||||||||||||     
T  35826658 ggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttcattgtttgtacagtga 35826559  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  35826558 catcaaaagttcagtcctcatagtatcatca 35826528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 25668692 - 25668755
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    ||||||||||| || |||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  25668692 aagttaacact-taacatcaaaagtgttgtgagtaacaccccactgtttgaacagtggcatcaaa 25668755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 13956520 - 13956425
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtaca 313  Q
    ||||||||||| |||||| | |||| ||||||||||||    |||||||||||||| |||||||| ||| ||||| |||||| |||||||||||||    
T  13956520 ggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaactgtagtgagtaacacctcactgtttgtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 6824600 - 6824524
Alignment:
Q  274 gcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa---gttcagttgtcatagtatcatca 347  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| |||||||   |||||||  ||||||||||||||    
T  6824600 gcatcaaaagtgttgtgagtaacactccactgtttgtacagtgacatcaaaagtgttcagtcttcatagtatcatca 6824524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 38528411 - 38528282
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | |||| ||||  ||||||    |||||||||||||| |||||||| |||  |||| ||||||||| ||||| |||||||     
T  38528411 ggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacaccccattgtttatacagtga 38528312  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||| | ||||||||||||||    
T  38528311 catcaaaagttcag-tctcatagtatcatca 38528282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 12910350 - 12910447
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||| | |||| |||||||||| | |  ||||||| |||||| |||||||| | | ||| | ||||||||||||||||||||||    
T  12910350 ggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacaccccactgtttgtacagt 12910447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 347
Target Start/End: Original strand, 22980794 - 22980923
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||| |||| |||| ||||||||||||||||||| |  ||||||||||||||| ||||||| |   ||||| || |||||||||||||  || || |    
T  22980794 gaaaattttatgatgaagttatgagaatgacttttctggtgaagttaacactatagtatcaaaaatacagtgagtaataccccactgtttgagcaatgac 22980893  T
Q  319 atc-aaagttcagttgtcatagtatcatca 347  Q
    ||| ||||||||||   |||||||||||||    
T  22980894 atcaaaagttcagtccccatagtatcatca 22980923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 27318660 - 27318532
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    ||||||| | |||||| | |||||||||| |||||| |  |||||||||||| | ||| |||| ||| ||||| ||||| |||||||||||||| || ||    
T  27318660 aaaattcaacggtgaagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatgtagtgagtaacacaccactgtttgtacaatgaca 27318561  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || |||||| |||| ||| ||||||||||    
T  27318560 tcaaaagtttagttctcacagtatcatca 27318532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 324
Target Start/End: Complemental strand, 28416660 - 28416596
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    ||||||||||||||  ||||||||| ||||||| |||| ||||||||||||||||||| ||||||    
T  28416660 aagttaacactataatatcaaaagtattgtgagtaacatcccactgtttgtacagtggaatcaaa 28416596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 344
Target Start/End: Complemental strand, 35511655 - 35511525
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    |||||||||| |||||||||| | |||| |||||| |||||    ||||||||| |||| |||||| | ||| ||||| ||||| |||||||||||| ||    
T  35511655 aatggaaaatcctatggtgaagtcatgaaaatgacgtttctgatgaagttaacattataacatcaacactgtagtgagtaacactccactgtttgtaaag 35511556  T
Q  315 tggcatc-aaagttcagttgtcatagtatca 344  Q
    || |||| ||||||||||  ||||| |||||    
T  35511555 tgacatcaaaagttcagtcatcatactatca 35511525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 35933902 - 35933988
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccact 304  Q
    |||||||| ||||||||| | |||||||||| |||| |    ||||||||||||||| ||||||||||||||||| |||||| ||||    
T  35933902 ggaaaattgtatggtgaagtcatgagaatgatttttttgatgaagttaacactatagaatcaaaagtgttgtgagtaacacctcact 35933988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 42342773 - 42342839
Alignment:
Q  258 gaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    ||||||||| |||||| |||||||| ||||||||| || |||||||||||| ||||||| |||||||    
T  42342773 gaaagttaatactataacatcaaaaatgttgtgagtaataccccactgtttatacagtgacatcaaa 42342839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 227 - 347
Target Start/End: Complemental strand, 43308818 - 43308697
Alignment:
Q  227 tatggtgaaattatgagaatgac-ttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaa 324  Q
    ||||||||| | ||||||||||| |||| ||| |||||||||| |||| |||||||| |||  |||  |||| ||||||||| ||||| ||||||| |||    
T  43308818 tatggtgaagtcatgagaatgactttttttagtaaagttaacattataacatcaaaaatgtaatgaataaca-cccactgttcgtacaatggcatcaaaa 43308720  T
Q  325 gttcagttgtcatagtatcatca 347  Q
    |||||||  ||||||||||||||    
T  43308719 gttcagtcctcatagtatcatca 43308697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 11897999 - 11898132
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacag 314  Q
    |||| |||||| || |||||| | |||| ||| |||||||| | |||||||| | ||||||||||||||||   |||| ||||||| |||  ||||||||    
T  11897999 aatgaaaaattttagggtgaagtcatgataataacttttctggtaaagttaatattatagcatcaaaagtgcactgagtaacaccctactagttgtacag 11898098  T
Q  315 tggcatc-aaagttcagttgtcatagtatcatca 347  Q
    || |||| |||||| |||  ||||||||||||||    
T  11898099 tgacatcaaaagtttagtcctcatagtatcatca 11898132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 16004554 - 16004477
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaat-gacttttctaggaaagttaacactatagcatcaaaagtgttgtgag 292  Q
    ||||||||||||||||| || | |||||||| ||||||||| |  |||||||||||||| |||||||| |||||||||    
T  16004554 atggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaatgttgtgag 16004477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 22255272 - 22255312
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  22255272 tgtacaatggcatcaaaagttcagttctcatattatcatca 22255312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 365 - 404
Target Start/End: Complemental strand, 43308736 - 43308697
Alignment:
Q  365 gtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  43308736 gtacaatggcatcaaaagttcagtcctcatagtatcatca 43308697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 324
Target Start/End: Original strand, 8436970 - 8437072
Alignment:
Q  222 aattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc 321  Q
    |||||||  ||||| | |||||||||| |||| | |  || ||||||||||||| || ||||||| ||||| |||| |||| ||||||||||||| ||||    
T  8436970 aattctaatgtgaagtcatgagaatgatttttttggtgaaattaacactatagcttccaaagtgtagtgagtaacatcccattgtttgtacagtgacatc 8437069  T
Q  322 aaa 324  Q
    |||    
T  8437070 aaa 8437072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 347
Target Start/End: Original strand, 22255223 - 22255312
Alignment:
Q  260 aagttaacactatagcatcaaaag-tgttgtgaggaacaccccactgtttgtacagtggcatcaaa-gttcagttgtcatagtatcatca 347  Q
    ||||||||| |||| ||||||||  |||  |||| |||||||||| ||||||||| |||||||||| |||||||| ||||| ||||||||    
T  22255223 aagttaacattataacatcaaaaaatgtaatgagtaacaccccaccgtttgtacaatggcatcaaaagttcagttctcatattatcatca 22255312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 24886194 - 24886234
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  24886194 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 24886234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 27330394 - 27330434
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  27330394 tgtacaatggcatcaaaagttcagtcttcatagtatcatca 27330434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 15992636 - 15992585
Alignment:
Q  297 accccactgtttgtacagtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||||||||||||||| |||| ||||||||||  ||||||||||||||    
T  15992636 accccactgtttgtacagtgacatcaaaagttcagtcttcatagtatcatca 15992585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 23954912 - 23954834
Alignment:
Q  271 atagcatcaaaagtgttgtgaggaacaccccactgtttgtac-agtggcatcaaa-gttcagttgtcatagtatcatca 347  Q
    ||||||| |||| | | ||||| ||||||||||||||| ||| |||||||||||| ||||||||  |||||||||||||    
T  23954912 atagcataaaaaatatagtgagtaacaccccactgtttttactagtggcatcaaaagttcagtttccatagtatcatca 23954834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 404
Target Start/End: Complemental strand, 30969407 - 30969369
Alignment:
Q  366 tacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  30969407 tacaatgacatcaaaagttcagtcctcatagtatcatca 30969369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 26317860 - 26317795
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaa 282  Q
    |||||||||||||| |||| | |||| |||||||||| | |  |||||||||||||| ||||||||    
T  26317860 tggaaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaacactataacatcaaaa 26317795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 31705785 - 31705680
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||||||||||||| | || | ||||| |||| | |  |||||||||||||| |||||||| |||   ||| ||||||| || ||||||||| || |    
T  31705785 gaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacaccctaccgtttgtacaatgac 31705686  T
Q  319 atcaaa 324  Q
    ||||||    
T  31705685 atcaaa 31705680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 404
Target Start/End: Original strand, 33908330 - 33908363
Alignment:
Q  371 tggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||| |||||||||||||||    
T  33908330 tggcatcaaaagttcagtcctcatagtatcatca 33908363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 35826568 - 35826527
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatcag 405  Q
    |||||| || ||||||||||||||| ||||||||||||||||    
T  35826568 tgtacagtgacatcaaaagttcagtcctcatagtatcatcag 35826527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 5112398 - 5112358
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||||| | |||||||||||||    
T  5112398 tgtacagtggcatcaaaagttcagtccccatagtatcatca 5112358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 5829991 - 5830031
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||| ||| |||||||||||||||    
T  5829991 tgtacaatgacatcaaaagtttagtcctcatagtatcatca 5830031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 8741971 - 8741931
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||||||||||||||||||||||   |||||||||||||    
T  8741971 tgtacaatggcatcaaaagttcagtctccatagtatcatca 8741931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 14919661 - 14919573
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa-gttcagttgtcatagtatcatca 347  Q
    ||||||||| |||| |||||||| |||  |||| |||||| |||||||| || | || ||||||| |||||||  ||||||||||||||    
T  14919661 aagttaacattataacatcaaaaatgtaatgagtaacacctcactgtttatataatgacatcaaaagttcagtcctcatagtatcatca 14919573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 27318572 - 27318532
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||| |||||||| ||||||||||    
T  27318572 tgtacaatgacatcaaaagtttagttctcacagtatcatca 27318532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 31786731 - 31786691
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||| | |||||||||||||||    
T  31786731 tgtacagtggcatcaaaagttcaatcctcatagtatcatca 31786691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 402
Target Start/End: Original strand, 39572919 - 39572947
Alignment:
Q  374 catcaaaagttcagttctcatagtatcat 402  Q
    |||||||||||||||||||||||||||||    
T  39572919 catcaaaagttcagttctcatagtatcat 39572947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 5e-32; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 8513233 - 8513339
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | ||||||||||||||||| |  ||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||     
T  8513233 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactgtttgtacagtga 8513332  T
Q  318 catcaaa 324  Q
    |||||||    
T  8513333 catcaaa 8513339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 6088910 - 6089038
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| | |||||||||| |||||| |  ||||||||||||||| ||||||||||||||||| ||| |||||||||||||| |||||||    
T  6088910 aaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactatagtatcaaaagtgttgtgagtaacgccccactgtttgtaaagtggca 6089009  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || ||||||||||   |||||||||||||    
T  6089010 tcaaaagttcagtcaccatagtatcatca 6089038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 4319007 - 4318901
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | ||||||||||||||| | |  |||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||     
T  4319007 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacaccccactgtttgtacagtga 4318908  T
Q  318 catcaaa 324  Q
    |||||||    
T  4318907 catcaaa 4318901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 216 - 324
Target Start/End: Complemental strand, 7235220 - 7235112
Alignment:
Q  216 atggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagt 315  Q
    |||||||||||||||||||| ||||||||||||||||||  |  |||| ||||||||| |||||||||||| ||||| | ||||||||||||||||| ||    
T  7235220 atggaaaattctatggtgaagttatgagaatgacttttccggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactgtttgtacggt 7235121  T
Q  316 ggcatcaaa 324  Q
    | |||||||    
T  7235120 gccatcaaa 7235112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 347
Target Start/End: Original strand, 15491634 - 15491745
Alignment:
Q  237 ttatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatc-aaagttcagttgtc 335  Q
    ||||||||||||||||||| |  ||||||||| | || |||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||   ||    
T  15491634 ttatgagaatgacttttctcgtgaagttaacattgtaacatcaaaagtgttgtgagtaacaccccactatttgtacagtggcatcaaaagttcagccctc 15491733  T
Q  336 atagtatcatca 347  Q
    ||||||||||||    
T  15491734 atagtatcatca 15491745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 18498433 - 18498564
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaaca-ccccactgtttgtacagtg 316  Q
    |||||| ||||| ||||| | |||||||||||||| || |  ||||||||| ||||||||||||||||| ||||| |||| |||||| ||||||||||||    
T  18498433 ggaaaaatctatagtgaagtcatgagaatgactttcctggtgaagttaacattatagcatcaaaagtgtagtgagcaacacccccacagtttgtacagtg 18498532  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
    ||||| ||||||||||  ||||||||||||||    
T  18498533 gcatcaaaagttcagtcctcatagtatcatca 18498564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 3880123 - 3880017
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | | ||||||||||||||| |  ||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||| ||     
T  3880123 ggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacaccctactgtttgtacaatga 3880024  T
Q  318 catcaaa 324  Q
    |||||||    
T  3880023 catcaaa 3880017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 30353540 - 30353412
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| | ||||||||||||||||| |  ||||||||| |||| |||||||||||||| ||| || | | |||||||||||||||||||    
T  30353540 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattataacatcaaaagtgttgcgagtaatatctcactgtttgtacagtggca 30353441  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || | ||||||||   |||||||||||||    
T  30353440 tcgatagttcagtctccatagtatcatca 30353412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 214 - 347
Target Start/End: Original strand, 33618830 - 33618964
Alignment:
Q  214 caatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtaca 313  Q
    ||||||||||||||| |||||| | ||| |||  |||||||| |  |||| |||||||| ||||||||||||| ||||| | || |||| | |||||||     
T  33618830 caatggaaaattctacggtgaagtcatgggaaatacttttctggtgaagtcaacactatcgcatcaaaagtgtagtgagtagcaacccattatttgtacg 33618929  T
Q  314 gtggcatc-aaagttcagttgtcatagtatcatca 347  Q
    |||||||| ||||||||||| ||||||||||||||    
T  33618930 gtggcatcaaaagttcagttctcatagtatcatca 33618964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 29182205 - 29182269
Alignment:
Q  260 aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  29182205 aagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtgtcatcaaa 29182269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 33893187 - 33893091
Alignment:
Q  217 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtaca 313  Q
    |||||||||||||||| || | || ||||| | |||| |||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  33893187 tggaaaattctatggtaaagtcattagaataatttttttagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttgtaca 33893091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 345
Target Start/End: Original strand, 20768087 - 20768212
Alignment:
Q  219 gaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggc 318  Q
    ||||||||||||||||| | ||||||||||||||||| |  |||| |||||||||||||||||||||| ||||| | ||  ||| |||||||  ||||||    
T  20768087 gaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagca-tccattgtttgt-tagtggc 20768184  T
Q  319 atc-aaagttcagttgtcatagtatcat 345  Q
    ||| ||||||||||  ||||||||||||    
T  20768185 atcaaaagttcagtcctcatagtatcat 20768212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 345
Target Start/End: Original strand, 1945833 - 1945962
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctagga-aagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtg 316  Q
    ||||||||||| |||||| | || |||||||||||| | ||  |||||||||||||| |||||||| |||  |||| |||||||||||||||||| | ||    
T  1945833 ggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaatg 1945932  T
Q  317 gcatc-aaagttcagttgtcatagtatcat 345  Q
     |||| |||||||||   ||||||||||||    
T  1945933 acatcaaaagttcagccctcatagtatcat 1945962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 404
Target Start/End: Original strand, 33618931 - 33618964
Alignment:
Q  371 tggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||||||||||||||||||||||||||    
T  33618931 tggcatcaaaagttcagttctcatagtatcatca 33618964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 18498524 - 18498564
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  18498524 tgtacagtggcatcaaaagttcagtcctcatagtatcatca 18498564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 21017206 - 21017166
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  21017206 tgtacaatggcatcaaaagttcagtccccatagtatcatca 21017166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 5627391 - 5627497
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    ||||||||||| |||||| | || |||||||||||| | |  |||||||||||||| ||| |||| | |  |||| ||||||||||| |||||| | ||     
T  5627391 ggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacaccccactatttgtagaatga 5627490  T
Q  318 catcaaa 324  Q
    |||||||    
T  5627491 catcaaa 5627497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 6091277 - 6091237
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| ||| |||||||||||    
T  6091277 tgtacaatgccatcaaaagttcagtactcgtagtatcatca 6091237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 15491705 - 15491745
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    |||||| |||||||||||||||||  |||||||||||||||    
T  15491705 tgtacagtggcatcaaaagttcagccctcatagtatcatca 15491745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 24662241 - 24662189
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaac 267  Q
    |||||||||||||||||| || | |||| ||||||||||||||  ||||||||    
T  24662241 aatggaaaattctatggtaaagtcatgataatgacttttctagtgaagttaac 24662189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 8e-25; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 134 - 264
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtgg 317  Q
    |||||||||||||||||| | | || |||||||||||| |  ||||||||||| ||| || |||| ||||||||| ||||| |||||||||||||| |||    
T  134 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaacactccactgtttgtacaatgg 233  T
Q  318 catc-aaagttcagttgtcatagtatcatca 347  Q
    |||| ||||||||||  ||||||||||||||    
T  234 catcaaaagttcagtcctcatagtatcatca 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 94548 - 94462
Alignment:
Q  238 tatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggcatcaaa 324  Q
    ||||| ||||||||||||    ||||||||| |||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  94548 tatgaaaatgacttttctgatgaagttaacattataacatcaaaattgtagtgagtaacaccccactgtttgtacagtggcatcaaa 94462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 224 - 264
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  224 tgtacaatggcatcaaaagttcagtcctcatagtatcatca 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 7889 - 8017
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| |||| |||||||||||| |    |||||||||||||| |||||||| |||  |||| |||||||||||||||||||| || ||    
T  7889 aaaattctatggtgaagttataagaatgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacaccccactgtttgtacaatgaca 7988  T
Q  320 tc-aaagttcagttgtcatagtatcatca 347  Q
    || ||||||||||  ||||||||||||||    
T  7989 tcaaaagttcagtcctcatagtatcatca 8017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 7977 - 8017
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  7977 tgtacaatgacatcaaaagttcagtcctcatagtatcatca 8017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 42348 - 42439
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttg 309  Q
    |||||||| ||||||||| | |||||||| | |||||| |  |||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  42348 ggaaaattttatggtgaagtcatgagaataatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttg 42439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 100821 - 100885
Alignment:
Q  218 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaa 282  Q
    |||||||||||||||||| | |||||||||| |||| | |  |||||||| ||||| ||||||||    
T  100821 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacgctataacatcaaaa 100885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 11908 - 12039
Alignment:
Q  220 aaaattctatggtgaaattatgagaa-tgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaaca-ccccactgtttgta-cagtg 316  Q
    |||||||||||||||| | ||||||| |||||||||| |  || ||||||| ||| ||| |||||||||||||| |||| ||||| |||||||| |||||    
T  11908 aaaattctatggtgaagtcatgagaaatgacttttctggtgaaattaacaccataacattaaaagtgttgtgagtaacacccccattgtttgtatcagtg 12007  T
Q  317 gcatc-aaagttcagttgtcatagtatcatca 347  Q
    | ||| ||||||||||  ||||| ||||||||    
T  12008 gtatcaaaagttcagtcctcataatatcatca 12039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 12189 - 12149
Alignment:
Q  215 aatggaaaattctatggtgaaattatgagaatgacttttct 255  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  12189 aatggaaaattctatgatgaagttatgagaatgacttttct 12149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 43959 - 44087
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| |  | |||| ||||||| | |  |||||||| |||||  ||||||| |||  |||| ||||||||  |||||||||| |||||    
T  43959 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 44058  T
Q  320 tcaaa-gttcagttgtcatagtatcatca 347  Q
    | ||| |||||||  ||||||||||||||    
T  44059 taaaaagttcagtcctcatagtatcatca 44087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 44047 - 44087
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||||| ||||||||||| |||||||||||||||    
T  44047 tgtacaatggcataaaaagttcagtcctcatagtatcatca 44087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 154828 - 154700
Alignment:
Q  220 aaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgaggaacaccccactgtttgtacagtggca 319  Q
    |||||||||||||||| |  | |||| ||||||| | |  |||||||| |||||  ||||||| |||  |||| ||||||||  |||||||||| |||||    
T  154828 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 154729  T
Q  320 tcaaa-gttcagttgtcatagtatcatca 347  Q
    | ||| |||||||  ||||||||||||||    
T  154728 taaaaagttcagtcctcatagtatcatca 154700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 154740 - 154700
Alignment:
Q  364 tgtacaatggcatcaaaagttcagttctcatagtatcatca 404  Q
    ||||||||||||| ||||||||||| |||||||||||||||    
T  154740 tgtacaatggcataaaaagttcagtcctcatagtatcatca 154700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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