View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11029_low_29 (Length: 243)

Name: NF11029_low_29
Description: NF11029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11029_low_29
NF11029_low_29
[»] chr7 (36 HSPs)
chr7 (9-120)||(28950801-28950910)
chr7 (124-170)||(654800-654846)
chr7 (124-170)||(2751330-2751376)
chr7 (124-170)||(7175958-7176004)
chr7 (124-170)||(7275336-7275382)
chr7 (124-170)||(7799928-7799974)
chr7 (124-170)||(21835210-21835256)
chr7 (124-170)||(22119947-22119993)
chr7 (124-170)||(27704061-27704107)
chr7 (124-170)||(29861729-29861775)
chr7 (124-170)||(40543006-40543052)
chr7 (124-170)||(41907609-41907655)
chr7 (87-122)||(2103064-2103099)
chr7 (87-122)||(2344308-2344343)
chr7 (87-122)||(2751280-2751315)
chr7 (87-122)||(7176019-7176054)
chr7 (87-122)||(7275286-7275321)
chr7 (87-122)||(13332580-13332615)
chr7 (87-122)||(18044116-18044151)
chr7 (87-122)||(21217990-21218025)
chr7 (87-126)||(21370606-21370645)
chr7 (87-122)||(22119897-22119932)
chr7 (87-122)||(23854405-23854440)
chr7 (87-122)||(27312161-27312196)
chr7 (87-122)||(40543067-40543102)
chr7 (87-122)||(42913670-42913705)
chr7 (124-170)||(2103114-2103160)
chr7 (124-170)||(10091247-10091293)
chr7 (124-170)||(11997908-11997954)
chr7 (124-170)||(21217929-21217975)
chr7 (124-170)||(22703545-22703591)
chr7 (124-170)||(27009418-27009464)
chr7 (124-170)||(42814923-42814969)
chr7 (126-170)||(18044168-18044212)
chr7 (87-127)||(27009368-27009408)
chr7 (87-127)||(31197600-31197640)
[»] chr6 (19 HSPs)
chr6 (124-170)||(1344990-1345036)
chr6 (124-170)||(654242-654288)
chr6 (124-170)||(3222731-3222777)
chr6 (124-170)||(12390480-12390526)
chr6 (124-170)||(12591692-12591738)
chr6 (124-170)||(15360194-15360240)
chr6 (124-170)||(34147401-34147447)
chr6 (124-170)||(34160017-34160063)
chr6 (87-122)||(9238980-9239015)
chr6 (87-122)||(11448876-11448911)
chr6 (87-122)||(12591642-12591677)
chr6 (87-122)||(15360255-15360290)
chr6 (87-122)||(22576072-22576107)
chr6 (87-122)||(34147351-34147386)
chr6 (87-122)||(34159967-34160002)
chr6 (124-170)||(9239030-9239076)
chr6 (124-170)||(11448926-11448972)
chr6 (88-122)||(21148667-21148701)
chr6 (78-125)||(33718612-33718660)
[»] chr5 (27 HSPs)
chr5 (124-170)||(25586987-25587033)
chr5 (78-122)||(33709658-33709702)
chr5 (124-170)||(27498827-27498873)
chr5 (124-170)||(38684263-38684309)
chr5 (87-127)||(23270674-23270714)
chr5 (87-122)||(4603782-4603817)
chr5 (87-122)||(8484818-8484853)
chr5 (87-122)||(13108606-13108641)
chr5 (87-122)||(22392706-22392741)
chr5 (87-122)||(25586937-25586972)
chr5 (87-122)||(31288103-31288138)
chr5 (87-122)||(32059597-32059632)
chr5 (87-122)||(38631118-38631153)
chr5 (124-167)||(42193540-42193583)
chr5 (124-170)||(1827626-1827672)
chr5 (124-166)||(11465007-11465049)
chr5 (124-170)||(11926598-11926644)
chr5 (124-170)||(15641201-15641247)
chr5 (124-170)||(15971218-15971264)
chr5 (124-170)||(18207262-18207308)
chr5 (128-170)||(26009360-26009402)
chr5 (124-170)||(32059536-32059582)
chr5 (124-170)||(34310197-34310243)
chr5 (124-170)||(37495102-37495148)
chr5 (124-169)||(10869662-10869707)
chr5 (129-170)||(33709597-33709638)
chr5 (82-122)||(6014437-6014477)
[»] chr4 (28 HSPs)
chr4 (124-170)||(52983674-52983720)
chr4 (78-126)||(22625223-22625272)
chr4 (124-170)||(9517737-9517783)
chr4 (124-170)||(25852269-25852315)
chr4 (124-170)||(27528891-27528937)
chr4 (124-170)||(34723854-34723900)
chr4 (76-122)||(35229162-35229208)
chr4 (124-170)||(45787800-45787846)
chr4 (78-122)||(33696436-33696481)
chr4 (87-127)||(5609354-5609394)
chr4 (87-122)||(20566354-20566389)
chr4 (87-122)||(25852219-25852254)
chr4 (87-122)||(32986202-32986237)
chr4 (87-122)||(40059009-40059044)
chr4 (87-122)||(46714397-46714432)
chr4 (87-122)||(54127499-54127534)
chr4 (124-170)||(5609298-5609344)
chr4 (124-170)||(12500154-12500200)
chr4 (88-122)||(19660689-19660723)
chr4 (124-170)||(32986252-32986298)
chr4 (124-170)||(33696375-33696421)
chr4 (124-170)||(34844854-34844900)
chr4 (124-170)||(40058948-40058994)
chr4 (124-170)||(49287913-49287959)
chr4 (89-122)||(1985843-1985876)
chr4 (125-170)||(20566406-20566451)
chr4 (89-122)||(55961899-55961932)
chr4 (126-170)||(35674837-35674881)
[»] chr3 (29 HSPs)
chr3 (124-170)||(46576403-46576449)
chr3 (124-170)||(8456246-8456292)
chr3 (124-170)||(26108347-26108393)
chr3 (124-170)||(26174168-26174214)
chr3 (124-170)||(30807249-30807295)
chr3 (124-170)||(35492966-35493012)
chr3 (78-122)||(15566656-15566700)
chr3 (78-122)||(32151420-32151464)
chr3 (87-122)||(25379766-25379801)
chr3 (87-122)||(30257629-30257664)
chr3 (87-122)||(30807310-30807345)
chr3 (87-122)||(34492732-34492767)
chr3 (87-122)||(35492916-35492951)
chr3 (87-122)||(45529911-45529946)
chr3 (87-122)||(46576353-46576388)
chr3 (87-122)||(53424333-53424368)
chr3 (124-166)||(2511397-2511439)
chr3 (124-170)||(15566595-15566641)
chr3 (124-170)||(25289810-25289856)
chr3 (88-122)||(26174119-26174153)
chr3 (124-170)||(40133545-40133591)
chr3 (124-170)||(40940880-40940926)
chr3 (124-170)||(45272512-45272558)
chr3 (124-170)||(49258358-49258404)
chr3 (124-170)||(52821731-52821777)
chr3 (124-170)||(53234006-53234052)
chr3 (124-170)||(53424272-53424318)
chr3 (125-170)||(18176983-18177028)
chr3 (89-122)||(26108299-26108332)
[»] chr1 (27 HSPs)
chr1 (124-170)||(46113498-46113544)
chr1 (124-170)||(4621333-4621379)
chr1 (124-170)||(24122078-24122124)
chr1 (124-170)||(24674448-24674494)
chr1 (124-170)||(45859139-45859185)
chr1 (124-170)||(46607865-46607911)
chr1 (78-122)||(6776140-6776184)
chr1 (87-122)||(4621394-4621429)
chr1 (87-122)||(7197403-7197438)
chr1 (87-122)||(8077652-8077687)
chr1 (87-122)||(24674398-24674433)
chr1 (87-122)||(34778347-34778382)
chr1 (124-166)||(168256-168298)
chr1 (124-170)||(1378953-1378999)
chr1 (124-170)||(7578464-7578510)
chr1 (124-170)||(7766823-7766869)
chr1 (124-170)||(8077702-8077748)
chr1 (124-170)||(9500451-9500497)
chr1 (124-170)||(15059498-15059544)
chr1 (124-170)||(23734171-23734217)
chr1 (124-170)||(23741363-23741409)
chr1 (124-170)||(30677231-30677277)
chr1 (124-170)||(33905606-33905652)
chr1 (89-122)||(14258584-14258617)
chr1 (125-170)||(23232361-23232406)
chr1 (125-170)||(36155984-36156029)
chr1 (125-170)||(40145982-40146027)
[»] scaffold0576 (2 HSPs)
scaffold0576 (124-170)||(5178-5224)
scaffold0576 (87-122)||(5239-5274)
[»] scaffold0459 (2 HSPs)
scaffold0459 (124-170)||(10789-10835)
scaffold0459 (87-122)||(10850-10885)
[»] scaffold0366 (4 HSPs)
scaffold0366 (124-170)||(12096-12142)
scaffold0366 (87-122)||(9456-9491)
scaffold0366 (87-122)||(12157-12192)
scaffold0366 (124-170)||(9395-9441)
[»] scaffold0070 (1 HSPs)
scaffold0070 (124-170)||(40380-40426)
[»] scaffold0026 (1 HSPs)
scaffold0026 (124-170)||(97462-97508)
[»] scaffold0019 (1 HSPs)
scaffold0019 (124-170)||(161864-161910)
[»] scaffold0016 (1 HSPs)
scaffold0016 (124-170)||(32343-32389)
[»] chr8 (30 HSPs)
chr8 (128-170)||(2618249-2618291)
chr8 (124-170)||(3734719-3734765)
chr8 (124-170)||(4718704-4718750)
chr8 (124-170)||(6953103-6953149)
chr8 (124-170)||(15259502-15259548)
chr8 (94-167)||(25248380-25248451)
chr8 (124-170)||(34237751-34237797)
chr8 (124-170)||(39349315-39349361)
chr8 (125-170)||(1219409-1219454)
chr8 (87-122)||(2618195-2618230)
chr8 (87-122)||(3734780-3734815)
chr8 (87-122)||(4718654-4718689)
chr8 (124-167)||(14633013-14633056)
chr8 (87-122)||(18532116-18532151)
chr8 (87-122)||(19471618-19471653)
chr8 (87-122)||(19542542-19542577)
chr8 (87-122)||(19590119-19590154)
chr8 (87-122)||(28193483-28193518)
chr8 (87-122)||(34237812-34237847)
chr8 (87-122)||(42328014-42328049)
chr8 (124-170)||(4698819-4698865)
chr8 (124-170)||(8765622-8765668)
chr8 (124-170)||(10292114-10292160)
chr8 (124-170)||(27746431-27746477)
chr8 (124-170)||(28193533-28193579)
chr8 (124-166)||(32879338-32879380)
chr8 (125-170)||(21667610-21667655)
chr8 (78-122)||(26169005-26169050)
chr8 (124-168)||(7558041-7558085)
chr8 (134-170)||(36848845-36848881)
[»] chr2 (20 HSPs)
chr2 (124-170)||(4567533-4567579)
chr2 (124-170)||(10582086-10582132)
chr2 (124-170)||(17324821-17324867)
chr2 (124-170)||(35171855-35171901)
chr2 (124-170)||(36390664-36390710)
chr2 (125-170)||(32845147-32845192)
chr2 (129-170)||(45271444-45271485)
chr2 (127-170)||(14946837-14946880)
chr2 (87-122)||(18976582-18976617)
chr2 (124-170)||(1191568-1191614)
chr2 (124-170)||(15038014-15038060)
chr2 (124-166)||(25293221-25293263)
chr2 (124-170)||(33827669-33827715)
chr2 (124-166)||(43374425-43374467)
chr2 (124-170)||(44946149-44946195)
chr2 (124-170)||(44976250-44976296)
chr2 (87-120)||(8192510-8192543)
chr2 (125-170)||(24196060-24196105)
chr2 (124-169)||(36242409-36242454)
chr2 (87-119)||(33827733-33827765)
[»] scaffold0623 (2 HSPs)
scaffold0623 (87-122)||(1213-1248)
scaffold0623 (124-170)||(1152-1198)
[»] scaffold0199 (1 HSPs)
scaffold0199 (87-122)||(8564-8599)
[»] scaffold0051 (1 HSPs)
scaffold0051 (76-122)||(53028-53075)
[»] scaffold0217 (1 HSPs)
scaffold0217 (124-170)||(7405-7451)
[»] scaffold0157 (1 HSPs)
scaffold0157 (124-170)||(20277-20323)


Alignment Details
Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 28950801 - 28950910
Alignment:
Q  9 ctggattatttaaactgatttagagccaaattactagaactgtttaattaagaaaagnnnnnnnnccatacccatttaggttggcctagtggttggcttg 108  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||         |   |||||||||||||||||||||||||||||||    
T  28950801 ctggattacttaaactgatttagagccaaattactagaactgtttaattaagaaaaaaaccatatc--aacccatttaggttggcctagtggttggcttg 28950898  T
Q  109 gggtcttggagt 120  Q
    ||||||||||||    
T  28950899 gggtcttggagt 28950910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 654846 - 654800
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  654846 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 654800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 2751330 - 2751376
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  2751330 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 2751376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 7176004 - 7175958
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  7176004 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 7175958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 7275336 - 7275382
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  7275336 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 7275382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 7799974 - 7799928
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||    
T  7799974 ctcaggttcgattccctctggtgccaatttcagtgggttaagtccat 7799928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 21835210 - 21835256
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  21835210 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 21835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 22119947 - 22119993
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  22119947 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 22119993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 27704061 - 27704107
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||    
T  27704061 ctcaggttcgatttcctttggtgccaatttcggtgggctaagtccat 27704107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 29861729 - 29861775
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  29861729 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 29861775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 40543052 - 40543006
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  40543052 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 40543006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 41907655 - 41907609
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||||    
T  41907655 ctcaggttcgattctctctggtgccaatttcagtgggctaagtccat 41907609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 2103064 - 2103099
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  2103064 ggttggcctagtggttggcttgggatcttggagttt 2103099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 2344308 - 2344343
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  2344308 ggttggcctagtggttggcttgggatcttggagttt 2344343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 2751280 - 2751315
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  2751280 ggttggcctagtggttggcttgggatcttggagttt 2751315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 7176054 - 7176019
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  7176054 ggttggcctagtggttggcttgggatcttggagttt 7176019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 7275286 - 7275321
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  7275286 ggttggcctagtggttggcttgggatcttggagttt 7275321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 13332615 - 13332580
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  13332615 ggttggcctagtggttggcttgggatcttggagttt 13332580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 18044116 - 18044151
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  18044116 ggttggcctagtggttggcttgggatcttggagttt 18044151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 21218025 - 21217990
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  21218025 ggttggcctagtggttggcttgggatcttggagttt 21217990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 21370606 - 21370645
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagtttactc 126  Q
    |||||||||||||||||| ||||| |||||||||||||||    
T  21370606 ggttggcctagtggttggtttgggatcttggagtttactc 21370645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 22119897 - 22119932
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  22119897 ggttggcctagtggttggcttgggatcttggagttt 22119932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 23854405 - 23854440
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  23854405 ggttggcctagtggttggcttgggatcttggagttt 23854440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 27312161 - 27312196
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  27312161 ggttggcctagtggttggcttgggatcttggagttt 27312196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 40543102 - 40543067
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  40543102 ggttggcctagtggttggcttgggatcttggagttt 40543067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 42913705 - 42913670
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  42913705 ggttggcctagtggttggcttgggatcttggagttt 42913670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 2103114 - 2103160
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||  |||||||| |||||||||||||||    
T  2103114 ctcaggttcgattccctctggagccaatttcggtgggctaagtccat 2103160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 10091247 - 10091293
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||  |||||||| |||||||||||||||    
T  10091247 ctcaggttcgattccctctggagccaatttcggtgggctaagtccat 10091293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 11997908 - 11997954
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||    
T  11997908 ctcaggttcgattccctctggtgccaatttcggttggctaagtccat 11997954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 21217975 - 21217929
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||| | |||||||| |||||||||||||||    
T  21217975 ctcaggttcgattccctctgatgccaatttcggtgggctaagtccat 21217929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 22703545 - 22703591
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||||    
T  22703545 ctcaggttcgattccctctggtgtcaatttcggtgggctaagtccat 22703591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 27009418 - 27009464
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||  |||||||| |||||||| |||||||||||||||    
T  27009418 ctcaggttcgatcccctctggtgccaatttcggtgggctaagtccat 27009464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 42814923 - 42814969
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||||    
T  42814923 ctcaggttcgattccctctggtgtcaatttcggtgggctaagtccat 42814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 18044168 - 18044212
Alignment:
Q  126 caggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||| ||||| || |||||||| |||||||||||||||    
T  18044168 caggttcgattccctcttgtgccaatttcggtgggctaagtccat 18044212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 27009368 - 27009408
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagtttactca 127  Q
    ||||||||||||||||||||| || ||||||||||| ||||    
T  27009368 ggttggcctagtggttggcttcggatcttggagtttgctca 27009408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 31197600 - 31197640
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagtttactca 127  Q
    |||||| ||||||||||||||||| ||||||||||| ||||    
T  31197600 ggttggtctagtggttggcttgggatcttggagtttgctca 31197640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 1344990 - 1345036
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  1344990 ctcaggttcgattccctctggtgccaatttcagtgggctaagtccat 1345036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 654288 - 654242
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  654288 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 654242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 3222777 - 3222731
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  3222777 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 3222731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 12390480 - 12390526
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  12390480 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 12390526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 12591692 - 12591738
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||    
T  12591692 ctcaggttcgattccctctcgtgccaatttcagtgggctaagtccat 12591738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 15360240 - 15360194
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  15360240 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 15360194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 34147401 - 34147447
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  34147401 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 34147447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 34160017 - 34160063
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  34160017 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 34160063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 9238980 - 9239015
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  9238980 ggttggcctagtggttggcttgggatcttggagttt 9239015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 11448876 - 11448911
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  11448876 ggttggcctagtggttggcttgggatcttggagttt 11448911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 12591642 - 12591677
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  12591642 ggttggcctagtggttggcttgggatcttggagttt 12591677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 15360290 - 15360255
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  15360290 ggttggcctagtggttggcttgggatcttggagttt 15360255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 22576072 - 22576107
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  22576072 ggttggcctagtggttggcttgggatcttggagttt 22576107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 34147351 - 34147386
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  34147351 ggttggcctagtggttggcttgggatcttggagttt 34147386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 34159967 - 34160002
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  34159967 ggttggcctagtggttggcttgggatcttggagttt 34160002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 9239030 - 9239076
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| ||||| |||||||||    
T  9239030 ctcaggttcgattccctctggtgccaatttcggtgggttaagtccat 9239076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 11448926 - 11448972
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||  ||||||| |||||||| |||||||||||||||    
T  11448926 ctcaggttcgattctctctggtgccaatttcggtgggctaagtccat 11448972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 21148701 - 21148667
Alignment:
Q  88 gttggcctagtggttggcttggggtcttggagttt 122  Q
    ||||||||||||||||||||||| |||||||||||    
T  21148701 gttggcctagtggttggcttgggatcttggagttt 21148667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 33718660 - 33718612
Alignment:
Q  78 acccatttagg-ttggcctagtggttggcttggggtcttggagtttact 125  Q
    ||||||||||| |||| ||||||||||| ||||| ||||||||||||||    
T  33718660 acccatttagggttggtctagtggttggtttgggatcttggagtttact 33718612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 25586987 - 25587033
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||    
T  25586987 ctcaggttcgatttcctctggtgccaatttcggtgggctaagtccat 25587033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 33709702 - 33709658
Alignment:
Q  78 acccatttaggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  33709702 acccatttgggttggcctagtggttggcttgggatcttggagttt 33709658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 27498873 - 27498827
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  27498873 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 27498827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 38684263 - 38684309
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  38684263 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 38684309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 23270714 - 23270674
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagtttactca 127  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  23270714 ggttggcctagtggttggcttgggatcttggagtttgctca 23270674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 4603782 - 4603817
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  4603782 ggttggcctagtggttggcttgggatcttggagttt 4603817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 8484853 - 8484818
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  8484853 ggttggcctagtggttggcttgggatcttggagttt 8484818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 13108641 - 13108606
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  13108641 ggttggcctagtggttggcttgggatcttggagttt 13108606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 22392706 - 22392741
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  22392706 ggttggcctagtggttggcttgggatcttggagttt 22392741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 25586937 - 25586972
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  25586937 ggttggcctagtggttggcttgggatcttggagttt 25586972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 31288138 - 31288103
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  31288138 ggttggcctagtggttggcttgggatcttggagttt 31288103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 32059632 - 32059597
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  32059632 ggttggcctagtggttggcttgggatcttggagttt 32059597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 38631153 - 38631118
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  38631153 ggttggcctagtggttggcttgggatcttggagttt 38631118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 42193540 - 42193583
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtc 167  Q
    |||||||||||||||||||| | |||||||| ||||||||||||    
T  42193540 ctcaggttcgatttcctctgatgccaatttcggtgggctaagtc 42193583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 1827672 - 1827626
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||| |||||||||| ||||| |||||||||    
T  1827672 ctcaggttcgattccctctgataccaatttcggtgggttaagtccat 1827626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 11465049 - 11465007
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagt 166  Q
    |||||||||||||||||||||| |||||||  |||||||||||    
T  11465049 ctcaggttcgatttcctctggtgccaattttggtgggctaagt 11465007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 11926644 - 11926598
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||| |||| |||||||| |||||||| |||||||||||||||    
T  11926644 ctcaggttagattccctctggtgccaatttcggtgggctaagtccat 11926598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 15641247 - 15641201
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||  |||||||| |||||||||||||||    
T  15641247 ctcaggttcgattccctctggagccaatttcggtgggctaagtccat 15641201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 15971264 - 15971218
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||||||||| |  ||||||| |||||||||||||||    
T  15971264 ctcaggttcgatttcctctgatgtcaatttcggtgggctaagtccat 15971218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 18207262 - 18207308
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||| ||| |||||||| |||||||||||||||    
T  18207262 ctcaggttcgattccctccggtgccaatttcggtgggctaagtccat 18207308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 26009402 - 26009360
Alignment:
Q  128 ggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||    
T  26009402 ggttcgattccctttggtgccaatttcagtgggctaagtccat 26009360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 32059582 - 32059536
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| | |||||| |||||||| |||||||||||||||    
T  32059582 ctcaggttcgattccttctggtgccaatttcggtgggctaagtccat 32059536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 34310197 - 34310243
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||  |||||||||||||||    
T  34310197 ctcaggttcgattccctctggtgccaattttggtgggctaagtccat 34310243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 37495102 - 37495148
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||  |||||||||||||||    
T  37495102 ctcaggttcgattccctctggtgccaattttggtgggctaagtccat 37495148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 10869707 - 10869662
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtcca 169  Q
    ||||||||||||| | |||||| |||||||| ||||||||||||||    
T  10869707 ctcaggttcgattccatctggttccaatttcggtgggctaagtcca 10869662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 33709638 - 33709597
Alignment:
Q  129 gttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||| |||||||| |||||||| |||||||||||||||    
T  33709638 gttcgattccctctggtgccaatttcggtgggctaagtccat 33709597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 6014477 - 6014437
Alignment:
Q  82 atttaggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||| ||||||||||||| |||||||||| |||||||||||    
T  6014477 atttgggttggcctagtgattggcttgggatcttggagttt 6014437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 52983674 - 52983720
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  52983674 ctcaggttcgattccctctggtgccaatttcagtgggctaagtccat 52983720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 22625272 - 22625223
Alignment:
Q  78 acccattt-aggttggcctagtggttggcttggggtcttggagtttactc 126  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  22625272 acccatttgaggttggcctagtggttggcttgggatcttggagtttactc 22625223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 9517783 - 9517737
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||||    
T  9517783 ctcaggttcgattctctctggtgccaatttcagtgggctaagtccat 9517737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 25852269 - 25852315
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  25852269 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 25852315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 27528937 - 27528891
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  27528937 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 27528891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 34723854 - 34723900
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  34723854 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 34723900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 35229162 - 35229208
Alignment:
Q  76 atacccatttaggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||||    
T  35229162 atacacatttgggttggcctagtggttggcttgggatcttggagttt 35229208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 45787846 - 45787800
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||| | ||||||||||||||||||||||||    
T  45787846 ctcaggttcgattccctctgatgccaatttcagtgggctaagtccat 45787800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 33696481 - 33696436
Alignment:
Q  78 acccatttagg-ttggcctagtggttggcttggggtcttggagttt 122  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||    
T  33696481 acccatttagggttggcctagtggttggcttgggatcttggagttt 33696436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 5609394 - 5609354
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagtttactca 127  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  5609394 ggttggcctagtggttggcttgggatcttggagtttgctca 5609354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 20566354 - 20566389
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  20566354 ggttggcctagtggttggcttgggatcttggagttt 20566389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 25852219 - 25852254
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  25852219 ggttggcctagtggttggcttgggatcttggagttt 25852254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 32986202 - 32986237
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  32986202 ggttggcctagtggttggcttgggatcttggagttt 32986237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 40059044 - 40059009
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  40059044 ggttggcctagtggttggcttgggatcttggagttt 40059009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 46714397 - 46714432
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  46714397 ggttggcctagtggttggcttgggatcttggagttt 46714432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 54127534 - 54127499
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  54127534 ggttggcctagtggttggcttgggatcttggagttt 54127499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 5609344 - 5609298
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||  ||||||| |||||||| |||||||||||||||    
T  5609344 ctcaggttcgattctctctggtgccaatttcggtgggctaagtccat 5609298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 12500200 - 12500154
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||| |||| |||||||| ||||||||| ||||||||||||||    
T  12500200 ctcaggtttgattccctctggtgccaatttcaatgggctaagtccat 12500154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 19660723 - 19660689
Alignment:
Q  88 gttggcctagtggttggcttggggtcttggagttt 122  Q
    ||||||||||||||||||||||| |||||||||||    
T  19660723 gttggcctagtggttggcttgggatcttggagttt 19660689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 32986252 - 32986298
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||| ||| |||||||| |||||||| |||||||||||||||    
T  32986252 ctcaggttcaattccctctggtgccaatttcggtgggctaagtccat 32986298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 33696421 - 33696375
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||| ||| |||||||| |||||||| |||||||||||||||    
T  33696421 ctcaggttcaattccctctggtgccaatttcggtgggctaagtccat 33696375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 34844900 - 34844854
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||  ||||||| |||||||| |||||||||||||||    
T  34844900 ctcaggttcgattctctctggtgccaatttcggtgggctaagtccat 34844854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 40058994 - 40058948
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||  ||||||| |||||||| |||||||||||||||    
T  40058994 ctcaggttcgattctctctggtgccaatttcggtgggctaagtccat 40058948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 49287913 - 49287959
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||  ||||||| |||||||| |||||||||||||||    
T  49287913 ctcaggttcgattctctctggtgccaatttcggtgggctaagtccat 49287959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 1985843 - 1985876
Alignment:
Q  89 ttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||| |||||||||||    
T  1985843 ttggcctagtggttggcttgggatcttggagttt 1985876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 20566406 - 20566451
Alignment:
Q  125 tcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||| |||||||| |||||||| |||||| ||||||||    
T  20566406 tcaggttcgattccctctggtgccaatttcggtgggcaaagtccat 20566451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 55961932 - 55961899
Alignment:
Q  89 ttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||| |||||||||||    
T  55961932 ttggcctagtggttggcttgggatcttggagttt 55961899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 35674881 - 35674837
Alignment:
Q  126 caggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||| |||||||  |||||||| |||||||||||||||    
T  35674881 caggttcgattccctctggagccaatttcggtgggctaagtccat 35674837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 46576403 - 46576449
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  46576403 ctcaggttcgattccctctggtgccaatttcagtgggctaagtccat 46576449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 8456292 - 8456246
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  8456292 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 8456246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 26108347 - 26108393
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  26108347 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 26108393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 26174168 - 26174214
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||||||||||| |||||||| ||||| |||||||||    
T  26174168 ctcaggttcgatttcctctggtgccaatttcggtgggttaagtccat 26174214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 30807295 - 30807249
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  30807295 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 30807249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 35492966 - 35493012
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  35492966 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 35493012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 15566700 - 15566656
Alignment:
Q  78 acccatttaggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||| |||||||||||||||||||||| | |||||||||||    
T  15566700 acccatttgggttggcctagtggttggcttgagatcttggagttt 15566656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 32151420 - 32151464
Alignment:
Q  78 acccatttaggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||| ||||||||||||||||| |||||| |||||||||||    
T  32151420 acccatttgggttggcctagtggttgacttgggatcttggagttt 32151464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 25379766 - 25379801
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  25379766 ggttggcctagtggttggcttgggatcttggagttt 25379801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 30257629 - 30257664
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  30257629 ggttggcctagtggttggcttgggatcttggagttt 30257664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 30807345 - 30807310
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  30807345 ggttggcctagtggttggcttgggatcttggagttt 30807310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 34492767 - 34492732
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  34492767 ggttggcctagtggttggcttgggatcttggagttt 34492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 35492916 - 35492951
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  35492916 ggttggcctagtggttggcttgggatcttggagttt 35492951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 45529946 - 45529911
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  45529946 ggttggcctagtggttggcttgggatcttggagttt 45529911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 46576353 - 46576388
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  46576353 ggttggcctagtggttggcttgggatcttggagttt 46576388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 53424368 - 53424333
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  53424368 ggttggcctagtggttggcttgggatcttggagttt 53424333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 2511439 - 2511397
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagt 166  Q
    ||||||||||||| |||||||| |||||||| |||||||||||    
T  2511439 ctcaggttcgattccctctggtgccaatttcggtgggctaagt 2511397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 15566641 - 15566595
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||||| || |||||||| |||||||||||||||    
T  15566641 ctcaggttcgattccctctagtgccaatttcggtgggctaagtccat 15566595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 25289856 - 25289810
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||||| || |||||||| |||||||||||||||    
T  25289856 ctcaggttcgattccctctagtgccaatttcggtgggctaagtccat 25289810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 26174119 - 26174153
Alignment:
Q  88 gttggcctagtggttggcttggggtcttggagttt 122  Q
    ||||||||||||||||||||||| |||||||||||    
T  26174119 gttggcctagtggttggcttgggatcttggagttt 26174153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 40133591 - 40133545
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||||    
T  40133591 ctcaggttcgattccctctggtgtcaatttcggtgggctaagtccat 40133545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 40940880 - 40940926
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||| ||||||||||    
T  40940880 ctcaggttcgattccctctggtgccaatttcggtggactaagtccat 40940926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 45272558 - 45272512
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||| ||||||| |||||||| |||||||| |||||||||||||||    
T  45272558 ctcagtttcgattccctctggtgccaatttcggtgggctaagtccat 45272512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 49258404 - 49258358
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||||| || |||||||| |||||||||||||||    
T  49258404 ctcaggttcgattccctctagtgccaatttcggtgggctaagtccat 49258358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 52821777 - 52821731
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| ||| |||||||||||    
T  52821777 ctcaggttcgattccctctggtgccaatttcggtgagctaagtccat 52821731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 53234052 - 53234006
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||  ||||||| |||||||| |||||||||||||||    
T  53234052 ctcaggttcgattctctctggtgccaatttcggtgggctaagtccat 53234006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 53424318 - 53424272
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||| |||| |||||||| |||||||||||||||    
T  53424318 ctcaggttcgattccctttggtgccaatttcggtgggctaagtccat 53424272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 18177028 - 18176983
Alignment:
Q  125 tcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||| |||||||| |||||||| |||| ||||||||||    
T  18177028 tcaggttcgattccctctggtgccaatttcggtggactaagtccat 18176983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 26108299 - 26108332
Alignment:
Q  89 ttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||| |||||||||||    
T  26108299 ttggcctagtggttggcttgggatcttggagttt 26108332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 46113544 - 46113498
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  46113544 ctcaggttcgattccctctggtaccaatttcggtgggctaagtccat 46113498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 4621379 - 4621333
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  4621379 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 4621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 24122078 - 24122124
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  24122078 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 24122124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 24674448 - 24674494
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  24674448 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 24674494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 45859185 - 45859139
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  45859185 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 45859139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 46607865 - 46607911
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  46607865 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 46607911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 6776140 - 6776184
Alignment:
Q  78 acccatttaggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||    
T  6776140 acccatttgggttggcctagtggttggtttgggatcttggagttt 6776184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 4621429 - 4621394
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  4621429 ggttggcctagtggttggcttgggatcttggagttt 4621394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 7197438 - 7197403
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  7197438 ggttggcctagtggttggcttgggatcttggagttt 7197403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 8077652 - 8077687
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  8077652 ggttggcctagtggttggcttgggatcttggagttt 8077687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 24674398 - 24674433
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  24674398 ggttggcctagtggttggcttgggatcttggagttt 24674433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 34778347 - 34778382
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  34778347 ggttggcctagtggttggcttgggatcttggagttt 34778382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 168256 - 168298
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagt 166  Q
    ||||||||||||| |||||||| |||||||| |||||||||||    
T  168256 ctcaggttcgattccctctggtgccaatttcggtgggctaagt 168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 1378953 - 1378999
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||| |||||||||||||||||  ||||||| |||||||||||||||    
T  1378953 ctcatgttcgatttcctctggtgtcaatttcggtgggctaagtccat 1378999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 7578464 - 7578510
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||| |||| |||||||| |||||||||||||||    
T  7578464 ctcaggttcgattccctatggtgccaatttcggtgggctaagtccat 7578510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 7766869 - 7766823
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| | |||||| |||||||||||||||    
T  7766869 ctcaggttcgattccctctggtgctaatttcggtgggctaagtccat 7766823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 8077702 - 8077748
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||  ||||||| |||||||| |||||||||||||||    
T  8077702 ctcaggttcgattctctctggtgccaatttcggtgggctaagtccat 8077748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 9500497 - 9500451
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||  ||||||| |||||||| |||||||||||||||    
T  9500497 ctcaggttcgattctctctggtgccaatttcggtgggctaagtccat 9500451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 15059544 - 15059498
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||  ||||||| |||||||| |||||||||||||||    
T  15059544 ctcaggttcgattctctctggtgccaatttcggtgggctaagtccat 15059498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 23734171 - 23734217
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||| | |||||||| |||||||||||||||    
T  23734171 ctcaggttcgattccctctgatgccaatttcggtgggctaagtccat 23734217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 23741363 - 23741409
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||| | |||||||| |||||||||||||||    
T  23741363 ctcaggttcgattccctctgatgccaatttcggtgggctaagtccat 23741409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 30677231 - 30677277
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||| |||| |||||||| |||||||| |||||||||||||||    
T  30677231 ctcaggtttgattccctctggtgccaatttcggtgggctaagtccat 30677277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 33905652 - 33905606
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||||||||| ||||||| ||||| |||||||||    
T  33905652 ctcaggttcgattccctctggtatcaatttcggtgggttaagtccat 33905606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 14258617 - 14258584
Alignment:
Q  89 ttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||| |||||||||||    
T  14258617 ttggcctagtggttggcttgggatcttggagttt 14258584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 23232406 - 23232361
Alignment:
Q  125 tcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||| |||||||  |||||||| |||||||||||||||    
T  23232406 tcaggttcgattccctctggcgccaatttcggtgggctaagtccat 23232361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 36156029 - 36155984
Alignment:
Q  125 tcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||| |||||||| |||||||| |||||| ||||||||    
T  36156029 tcaggttcgattccctctggtgccaatttcggtgggccaagtccat 36155984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 40146027 - 40145982
Alignment:
Q  125 tcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||||||| || |||||||  |||||||||||||||    
T  40146027 tcaggttcgatttcctctagtgccaatttatgtgggctaagtccat 40145982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 5224 - 5178
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  5224 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 5178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 5274 - 5239
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  5274 ggttggcctagtggttggcttgggatcttggagttt 5239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 10835 - 10789
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||    
T  10835 ctcaggttcgatttcctctggagccaatttcggtgggctaagtccat 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 10885 - 10850
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  10885 ggttggcctagtggttggcttgggatcttggagttt 10850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 12142 - 12096
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||    
T  12142 ctcaggttcgatttcctctggagccaatttcggtgggctaagtccat 12096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 9491 - 9456
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  9491 ggttggcctagtggttggcttgggatcttggagttt 9456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 12192 - 12157
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  12192 ggttggcctagtggttggcttgggatcttggagttt 12157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 9441 - 9395
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||  |||||||| |||||||||||||||    
T  9441 ctcaggttcgattccctctggagccaatttcggtgggctaagtccat 9395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 40380 - 40426
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  40380 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 40426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 97508 - 97462
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  97508 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 97462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 161864 - 161910
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  161864 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 161910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 32343 - 32389
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||    
T  32343 ctcaggttcgatttcctctggagccaatttcggtgggctaagtccat 32389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 2618249 - 2618291
Alignment:
Q  128 ggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  2618249 ggttcgattccctctggtgccaatttcagtgggctaagtccat 2618291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 3734765 - 3734719
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  3734765 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 3734719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 4718704 - 4718750
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  4718704 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 4718750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 6953149 - 6953103
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  6953149 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 6953103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 15259548 - 15259502
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  15259548 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 15259502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 25248380 - 25248451
Alignment:
Q  94 ctagtggttggcttggggtcttggagtttactcaggttcgatttcctctggtaccaatttcagtgggctaagtc 167  Q
    ||||||||||||||||| |||||||| |  ||||||||||||| ||||||||  ||||||| || |||||||||    
T  25248380 ctagtggttggcttgggatcttggagat--ctcaggttcgattccctctggtgtcaatttcggtaggctaagtc 25248451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 34237797 - 34237751
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  34237797 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 34237751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 39349315 - 39349361
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  39349315 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 39349361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 1219409 - 1219454
Alignment:
Q  125 tcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||| |||||| || |||||||||||||||||||||||    
T  1219409 tcaggttcgattccctctgatatcaatttcagtgggctaagtccat 1219454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 2618195 - 2618230
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  2618195 ggttggcctagtggttggcttgggatcttggagttt 2618230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 3734815 - 3734780
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  3734815 ggttggcctagtggttggcttgggatcttggagttt 3734780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 4718654 - 4718689
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  4718654 ggttggcctagtggttggcttgggatcttggagttt 4718689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 14633013 - 14633056
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtc 167  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||    
T  14633013 ctcaggttcgattccctctggtgccaatttcggtgggctaagtc 14633056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 18532116 - 18532151
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  18532116 ggttggcctagtggttggcttgggatcttggagttt 18532151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 19471618 - 19471653
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  19471618 ggttggcctagtggttggcttgggatcttggagttt 19471653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 19542542 - 19542577
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  19542542 ggttggcctagtggttggcttgggatcttggagttt 19542577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 19590154 - 19590119
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  19590154 ggttggcctagtggttggcttgggatcttggagttt 19590119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 28193483 - 28193518
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  28193483 ggttggcctagtggttggcttgggatcttggagttt 28193518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 34237847 - 34237812
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  34237847 ggttggcctagtggttggcttgggatcttggagttt 34237812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 42328014 - 42328049
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  42328014 ggttggcctagtggttggcttgggatcttggagttt 42328049  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 4698865 - 4698819
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||||    
T  4698865 ctcaggttcgattccctctggtgtcaatttcggtgggctaagtccat 4698819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 8765668 - 8765622
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| ||||||||  ||||||||||||||    
T  8765668 ctcaggttcgattccctctggtgccaatttcgatgggctaagtccat 8765622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 10292114 - 10292160
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||| | |||||||||||||||| |||||||    
T  10292114 ctcaggttcgattccctctgatgccaatttcagtgggctgagtccat 10292160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 27746477 - 27746431
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||| |||| |||||||| |||||||||||||||    
T  27746477 ctcaggttcgattccctttggtgccaatttcggtgggctaagtccat 27746431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 28193533 - 28193579
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| ||||| |||||||||    
T  28193533 ctcaggttcgattccctctggtgccaatttcggtgggttaagtccat 28193579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 32879338 - 32879380
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagt 166  Q
    ||||||||||||| |||||||| |||||||| |||||||||||    
T  32879338 ctcaggttcgattccctctggtgccaatttcggtgggctaagt 32879380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 21667610 - 21667655
Alignment:
Q  125 tcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||||| |||| | |||||| |||||||||||||||    
T  21667610 tcaggttcgatttcctttggtgctaatttcggtgggctaagtccat 21667655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 26169050 - 26169005
Alignment:
Q  78 acccatttagg-ttggcctagtggttggcttggggtcttggagttt 122  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||    
T  26169050 acccatttagggttggcctagtggtttgcttgggatcttggagttt 26169005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 7558085 - 7558041
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtcc 168  Q
    ||||| |||||||||||||||| |||||||  |||||||||||||    
T  7558085 ctcagattcgatttcctctggtgccaattttggtgggctaagtcc 7558041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 36848881 - 36848845
Alignment:
Q  134 atttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||| |||||||| |||||||||||||||    
T  36848881 atttcctctggtgccaatttcggtgggctaagtccat 36848845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 4567579 - 4567533
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||    
T  4567579 ctcaggttcgatttcctctggtgccaatttcggtgggctaaatccat 4567533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 10582132 - 10582086
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  10582132 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 10582086  T

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Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 17324821 - 17324867
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  17324821 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccat 17324867  T

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Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 35171855 - 35171901
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  35171855 ctcaggttcgattccctctggcaccaatttcggtgggctaagtccat 35171901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 36390710 - 36390664
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||    
T  36390710 ctcaggttcgatttcctctggtgccaatttcggtggactaagtccat 36390664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 32845147 - 32845192
Alignment:
Q  125 tcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||| |||||||| |||||||| |||||||||||||||    
T  32845147 tcaggttcgattccctctggtgccaatttcggtgggctaagtccat 32845192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 45271444 - 45271485
Alignment:
Q  129 gttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  45271444 gttcgattccctctggtgccaatttcagtgggctaagtccat 45271485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 14946837 - 14946880
Alignment:
Q  127 aggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||| |||||||  |||||||||||||||||||||||    
T  14946837 aggttcgattttctctggtgtcaatttcagtgggctaagtccat 14946880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 18976617 - 18976582
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  18976617 ggttggcctagtggttggcttgggatcttggagttt 18976582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 1191568 - 1191614
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||| || ||||| ||||||||||| |||||||||||||||    
T  1191568 ctcaggttcgtttccctctagtaccaatttcggtgggctaagtccat 1191614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 15038014 - 15038060
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||| |||| |||||||| |||||||||||||||    
T  15038014 ctcaggttcgattccctttggtgccaatttcggtgggctaagtccat 15038060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 25293221 - 25293263
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagt 166  Q
    ||||||||||||| |||||||| |||||||| |||||||||||    
T  25293221 ctcaggttcgattccctctggtgccaatttcggtgggctaagt 25293263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 33827715 - 33827669
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| ||||||||  ||||||||||||||    
T  33827715 ctcaggttcgattccctctggtgccaatttcgttgggctaagtccat 33827669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 43374467 - 43374425
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagt 166  Q
    ||||||||||||| |||||||| |||||||| |||||||||||    
T  43374467 ctcaggttcgattccctctggtgccaatttcggtgggctaagt 43374425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 44946195 - 44946149
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| ||| |||| |||||||| |||||||||||||||    
T  44946195 ctcaggttcgattccctttggtgccaatttcggtgggctaagtccat 44946149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 44976296 - 44976250
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||| |||||||  |||||||||||||||    
T  44976296 ctcaggttcgattccctctggtgccaattttggtgggctaagtccat 44976250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 120
Target Start/End: Complemental strand, 8192543 - 8192510
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagt 120  Q
    |||||||||||||||||||||||| |||||||||    
T  8192543 ggttggcctagtggttggcttgggatcttggagt 8192510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 24196060 - 24196105
Alignment:
Q  125 tcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||||||| |||||||| | |||||| |||||||||||||||    
T  24196060 tcaggttcgattccctctggtgcaaatttcggtgggctaagtccat 24196105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 36242454 - 36242409
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtcca 169  Q
    ||||||||||||| ||||||||  ||||||| ||||||||||||||    
T  36242454 ctcaggttcgattccctctggtgtcaatttcggtgggctaagtcca 36242409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 33827765 - 33827733
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggag 119  Q
    |||||||||||||||||||||||| ||||||||    
T  33827765 ggttggcctagtggttggcttgggatcttggag 33827733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 1248 - 1213
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  1248 ggttggcctagtggttggcttgggatcttggagttt 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 1198 - 1152
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||||||  |||||||| |||||||||||||||    
T  1198 ctcaggttcgattccctctggagccaatttcggtgggctaagtccat 1152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 8599 - 8564
Alignment:
Q  87 ggttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||||||||||||||||| |||||||||||    
T  8599 ggttggcctagtggttggcttgggatcttggagttt 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 53075 - 53028
Alignment:
Q  76 atacccatttagg-ttggcctagtggttggcttggggtcttggagttt 122  Q
    |||||||||| || |||||||||||||||||||||| |||||||||||    
T  53075 atacccatttgggattggcctagtggttggcttgggatcttggagttt 53028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 7451 - 7405
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    ||||||||||||| |||| ||| |||||||| |||||||||||||||    
T  7451 ctcaggttcgattccctccggtgccaatttcggtgggctaagtccat 7405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 20277 - 20323
Alignment:
Q  124 ctcaggttcgatttcctctggtaccaatttcagtgggctaagtccat 170  Q
    |||||||| |||| |||||||| ||||||||| ||||||||||||||    
T  20277 ctcaggtttgattccctctggtgccaatttcaatgggctaagtccat 20323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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