View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1102_low_2 (Length: 596)
Name: NF1102_low_2
Description: NF1102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1102_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 508; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 508; E-Value: 0
Query Start/End: Original strand, 31 - 554
Target Start/End: Complemental strand, 36047109 - 36046587
Alignment:
| Q |
31 |
caaatgtgacctaaattgaggccgagttgtggtaatcgagacattattagtggtgtgtttgaagaagtatgtttttggtcatttgtttttcaggaaagtg |
130 |
Q |
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| T |
36047109 |
caaatgtgacctaaattgaggccgagttgtggtaatcgagacatt-ttagtggtgtgtttgaacaagtatgttgttggtcatttgtttttcaggaaagtg |
36047011 |
T |
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| Q |
131 |
tagagaatggttctgcaggaaaaattgttgattgtattctatcacttaaatggtttcatgagtcgaagcagatgagcaatcaaagtggatccagcaaacg |
230 |
Q |
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| T |
36047010 |
tagagaatggttctgcaggaaaaattgttgattgtattctatcacttaaatggtttcatgagtcgaagcagatgagcaatcaaagtggatccagcaaacg |
36046911 |
T |
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| Q |
231 |
ctcaaaatctcctttagttttgcaatcaatcaatagattgcaacaaaaagccactactgcattaccctctgatgcatgtaggcgtttggatttgtctgca |
330 |
Q |
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| T |
36046910 |
ctcaaaatctcctttagttttgcaatcaatcaatagattgcaacaaaaagccactactgcattaccctctgatgcatgtaggcgtttggatttgtctgca |
36046811 |
T |
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| Q |
331 |
acatcggaaataaagcctcctgctgagagtaatgttcaaaaacaagaaggttcaatttctcaatcttactcatattagtatctgattcattgatttgaat |
430 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36046810 |
acatcggaaataaagcctcctgctgagagtaatgttcaaaaacaagaaggttcaatttctcaatcttactcatattagtatctgattcattgatttgaat |
36046711 |
T |
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| Q |
431 |
ttgaaattgagtttaaacttttattgaattttaatccgttagctgatggctagctgcacagtataatattaatgatcagactttgacagttgacattttg |
530 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36046710 |
ttgaaattgagtttaaacttttattgaattttaatccgttagctgatggctagctgcacagtataatattaatgatcagactttgacagttgacattttg |
36046611 |
T |
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| Q |
531 |
cactttaatcaaggaatattattc |
554 |
Q |
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| T |
36046610 |
cactttaatcaaggaatattattc |
36046587 |
T |
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