View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1102_low_3 (Length: 564)

Name: NF1102_low_3
Description: NF1102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1102_low_3
NF1102_low_3
[»] chr2 (36 HSPs)
chr2 (1-556)||(6743248-6743799)
chr2 (31-556)||(43694056-43694575)
chr2 (80-556)||(201324-201796)
chr2 (107-501)||(21132583-21132976)
chr2 (107-416)||(10039149-10039457)
chr2 (31-211)||(6743667-6743846)
chr2 (53-350)||(26861392-26861687)
chr2 (1-129)||(43694103-43694231)
chr2 (2-129)||(201324-201451)
chr2 (423-501)||(25365061-25365139)
chr2 (29-133)||(21132873-21132976)
chr2 (398-509)||(22795792-22795902)
chr2 (423-500)||(24668966-24669043)
chr2 (1-133)||(26861531-26861661)
chr2 (29-101)||(10039386-10039457)
chr2 (426-501)||(17634857-17634932)
chr2 (439-507)||(22841918-22841986)
chr2 (440-501)||(21120759-21120820)
chr2 (365-416)||(31346031-31346082)
chr2 (158-370)||(13361711-13361924)
chr2 (365-412)||(41301023-41301070)
chr2 (1-51)||(201401-201451)
chr2 (365-410)||(6477332-6477377)
chr2 (3-55)||(21132873-21132925)
chr2 (445-501)||(23149597-23149653)
chr2 (445-501)||(23561387-23561443)
chr2 (109-152)||(201296-201338)
chr2 (365-416)||(21072778-21072829)
chr2 (423-514)||(19702617-19702708)
chr2 (486-556)||(23265182-23265250)
chr2 (486-556)||(23280250-23280318)
chr2 (445-513)||(23291907-23291975)
chr2 (445-513)||(23333547-23333615)
chr2 (445-513)||(24653299-24653367)
chr2 (486-515)||(26583866-26583895)
chr2 (179-207)||(21132954-21132982)
[»] chr1 (33 HSPs)
chr1 (31-551)||(42094897-42095413)
chr1 (31-556)||(21542711-21543231)
chr1 (49-501)||(2332063-2332513)
chr1 (1-129)||(42095237-42095365)
chr1 (1-129)||(21542758-21542886)
chr1 (107-298)||(45496675-45496855)
chr1 (423-501)||(5381587-5381665)
chr1 (426-501)||(21744739-21744814)
chr1 (318-370)||(45499234-45499286)
chr1 (423-501)||(21733559-21733637)
chr1 (29-100)||(45496675-45496745)
chr1 (445-514)||(21665136-21665205)
chr1 (431-501)||(21986040-21986110)
chr1 (445-514)||(19860128-19860197)
chr1 (486-556)||(19663465-19663532)
chr1 (508-551)||(18712858-18712901)
chr1 (365-412)||(22130119-22130166)
chr1 (446-501)||(24960860-24960914)
chr1 (365-416)||(28313260-28313311)
chr1 (365-416)||(45574109-45574160)
chr1 (479-514)||(19665850-19665885)
chr1 (420-513)||(19777792-19777885)
chr1 (482-513)||(20940985-20941016)
chr1 (423-501)||(21699057-21699135)
chr1 (423-501)||(23634471-23634549)
chr1 (423-462)||(31926491-31926530)
chr1 (479-513)||(16882680-16882714)
chr1 (445-514)||(19853993-19854062)
chr1 (445-514)||(21736097-21736166)
chr1 (365-406)||(13527814-13527855)
chr1 (486-515)||(41112074-41112103)
chr1 (440-501)||(41315208-41315269)
chr1 (481-513)||(3705902-3705934)
[»] scaffold0106 (6 HSPs)
scaffold0106 (31-556)||(39056-39576)
scaffold0106 (1-129)||(39103-39231)
scaffold0106 (446-501)||(37077-37131)
scaffold0106 (446-501)||(29483-29537)
scaffold0106 (445-513)||(45897-45965)
scaffold0106 (445-513)||(50170-50238)
[»] scaffold0076 (4 HSPs)
scaffold0076 (31-556)||(29147-29667)
scaffold0076 (31-556)||(34548-35068)
scaffold0076 (1-129)||(29492-29620)
scaffold0076 (1-129)||(34893-35021)
[»] scaffold0011 (6 HSPs)
scaffold0011 (31-556)||(173563-174083)
scaffold0011 (1-129)||(173908-174036)
scaffold0011 (445-514)||(252805-252874)
scaffold0011 (445-514)||(259411-259480)
scaffold0011 (446-502)||(153282-153337)
scaffold0011 (439-502)||(20800-20863)
[»] chr7 (58 HSPs)
chr7 (31-556)||(19616950-19617470)
chr7 (31-512)||(27565493-27565962)
chr7 (127-501)||(38828810-38829183)
chr7 (158-416)||(15214258-15214516)
chr7 (107-370)||(13744837-13745099)
chr7 (1-207)||(48273836-48274042)
chr7 (107-377)||(32772057-32772328)
chr7 (19-211)||(48273776-48273968)
chr7 (107-370)||(36685310-36685572)
chr7 (108-370)||(30820317-30820578)
chr7 (1-186)||(48273914-48274098)
chr7 (1-129)||(19616997-19617125)
chr7 (29-208)||(10063369-10063535)
chr7 (1-181)||(10063319-10063486)
chr7 (4-129)||(27565543-27565668)
chr7 (427-494)||(23443153-23443220)
chr7 (29-100)||(13745029-13745099)
chr7 (483-556)||(4281155-4281225)
chr7 (431-501)||(14249671-14249741)
chr7 (29-130)||(32772057-32772158)
chr7 (49-129)||(38828810-38828890)
chr7 (365-416)||(1856490-1856541)
chr7 (365-416)||(13917662-13917713)
chr7 (365-416)||(16107948-16107999)
chr7 (365-416)||(25926389-25926440)
chr7 (365-416)||(42374394-42374445)
chr7 (431-501)||(14265141-14265211)
chr7 (446-502)||(1613548-1613603)
chr7 (365-412)||(13648193-13648240)
chr7 (423-501)||(14580695-14580773)
chr7 (30-133)||(30820476-30820578)
chr7 (29-132)||(36685470-36685572)
chr7 (431-501)||(19146493-19146563)
chr7 (431-501)||(20745892-20745962)
chr7 (1-51)||(27565618-27565668)
chr7 (481-514)||(14129211-14129244)
chr7 (481-514)||(14136057-14136090)
chr7 (481-514)||(14433029-14433062)
chr7 (439-500)||(21518308-21518369)
chr7 (445-501)||(16667597-16667653)
chr7 (445-501)||(17641967-17642023)
chr7 (365-498)||(20752146-20752280)
chr7 (365-416)||(11662017-11662068)
chr7 (442-501)||(12695568-12695627)
chr7 (369-416)||(13256608-13256655)
chr7 (365-416)||(14188383-14188434)
chr7 (423-501)||(15143161-15143239)
chr7 (431-498)||(19152814-19152881)
chr7 (423-501)||(45186397-45186475)
chr7 (479-514)||(46347886-46347921)
chr7 (424-501)||(15436708-15436785)
chr7 (446-514)||(12429794-12429862)
chr7 (486-515)||(12590630-12590659)
chr7 (486-515)||(13007471-13007500)
chr7 (365-410)||(15727461-15727506)
chr7 (481-513)||(15339836-15339868)
chr7 (439-471)||(15690926-15690958)
chr7 (439-471)||(15698519-15698551)
[»] chr3 (76 HSPs)
chr3 (31-556)||(14085186-14085706)
chr3 (31-556)||(14090587-14091107)
chr3 (1-556)||(49400175-49400706)
chr3 (31-513)||(24122246-24122725)
chr3 (31-512)||(12270472-12270950)
chr3 (29-501)||(19450805-19451277)
chr3 (29-501)||(19444239-19444711)
chr3 (107-501)||(14647033-14647426)
chr3 (179-500)||(10988813-10989133)
chr3 (31-335)||(8582514-8582816)
chr3 (127-416)||(30123463-30123752)
chr3 (107-416)||(11913450-11913759)
chr3 (80-370)||(14479645-14479934)
chr3 (329-556)||(8579193-8579416)
chr3 (127-412)||(51602617-51602903)
chr3 (107-370)||(31224014-31224276)
chr3 (116-370)||(13520021-13520274)
chr3 (31-211)||(49400128-49400307)
chr3 (158-370)||(50755463-50755675)
chr3 (19-186)||(21618831-21618997)
chr3 (19-186)||(36166980-36167146)
chr3 (1-129)||(14085233-14085361)
chr3 (1-129)||(14090634-14090762)
chr3 (1-129)||(24122550-24122678)
chr3 (1-129)||(8582641-8582769)
chr3 (1-129)||(12270775-12270902)
chr3 (97-207)||(21618831-21618941)
chr3 (97-207)||(36166980-36167090)
chr3 (2-133)||(14479804-14479934)
chr3 (1-101)||(21618891-21618990)
chr3 (1-101)||(36167040-36167139)
chr3 (423-501)||(14288180-14288258)
chr3 (3-132)||(19444290-19444418)
chr3 (3-132)||(19450856-19450984)
chr3 (431-501)||(35985649-35985719)
chr3 (29-133)||(31224173-31224276)
chr3 (107-186)||(10550841-10550919)
chr3 (426-502)||(13054865-13054941)
chr3 (29-129)||(14647326-14647426)
chr3 (29-101)||(10550841-10550912)
chr3 (49-132)||(51602820-51602903)
chr3 (431-501)||(42110153-42110223)
chr3 (486-556)||(17240461-17240528)
chr3 (49-129)||(30123672-30123752)
chr3 (365-416)||(42439-42490)
chr3 (365-416)||(5224234-5224285)
chr3 (365-416)||(15466006-15466057)
chr3 (446-513)||(31689771-31689837)
chr3 (366-416)||(13437151-13437201)
chr3 (452-513)||(31944395-31944455)
chr3 (365-416)||(10833395-10833446)
chr3 (38-133)||(13520021-13520115)
chr3 (365-416)||(16324630-16324681)
chr3 (365-416)||(43549745-43549796)
chr3 (445-514)||(12355168-12355237)
chr3 (445-514)||(18127706-18127775)
chr3 (445-514)||(18135476-18135545)
chr3 (29-101)||(11913450-11913522)
chr3 (445-513)||(11964075-11964143)
chr3 (365-410)||(17547567-17547612)
chr3 (131-187)||(37916969-37917025)
chr3 (423-501)||(15934096-15934174)
chr3 (423-501)||(15954101-15954179)
chr3 (365-412)||(26054528-26054575)
chr3 (445-514)||(12478842-12478911)
chr3 (483-513)||(13967787-13967817)
chr3 (483-513)||(13973262-13973292)
chr3 (481-514)||(13202702-13202735)
chr3 (436-512)||(14543481-14543557)
chr3 (423-460)||(16822990-16823027)
chr3 (80-133)||(50755622-50755675)
chr3 (2-55)||(50755622-50755675)
chr3 (436-515)||(54090898-54090978)
chr3 (450-513)||(12960536-12960599)
chr3 (3-51)||(14647326-14647374)
chr3 (179-207)||(19444233-19444261)
[»] chr5 (41 HSPs)
chr5 (1-513)||(1856470-1856980)
chr5 (1-513)||(21674440-21674948)
chr5 (29-501)||(43242511-43242981)
chr5 (107-502)||(22757817-22758213)
chr5 (107-416)||(36460699-36461007)
chr5 (107-370)||(21557105-21557367)
chr5 (80-370)||(24830059-24830348)
chr5 (31-211)||(1856848-1857027)
chr5 (158-370)||(21554460-21554672)
chr5 (29-186)||(18318639-18318795)
chr5 (31-207)||(21674821-21674995)
chr5 (19-186)||(20765688-20765854)
chr5 (107-207)||(18318695-18318795)
chr5 (97-207)||(20765744-20765854)
chr5 (1-101)||(18318646-18318745)
chr5 (1-101)||(20765695-20765794)
chr5 (2-133)||(24830218-24830348)
chr5 (3-129)||(43242804-43242929)
chr5 (423-501)||(21495825-21495903)
chr5 (29-133)||(21557264-21557367)
chr5 (421-501)||(10036074-10036154)
chr5 (387-501)||(18819804-18819916)
chr5 (445-513)||(19077459-19077526)
chr5 (365-416)||(18419363-18419414)
chr5 (487-556)||(22006836-22006902)
chr5 (365-416)||(27868664-27868715)
chr5 (365-416)||(33472653-33472704)
chr5 (365-462)||(21980109-21980206)
chr5 (29-133)||(22758109-22758213)
chr5 (29-133)||(36460699-36460803)
chr5 (344-380)||(19077363-19077399)
chr5 (486-551)||(18407897-18407959)
chr5 (446-501)||(26754464-26754518)
chr5 (440-501)||(21900999-21901060)
chr5 (365-416)||(21553477-21553528)
chr5 (423-501)||(21889516-21889594)
chr5 (1-55)||(24830218-24830272)
chr5 (29-74)||(21554658-21554702)
chr5 (175-211)||(20765818-20765854)
chr5 (107-147)||(21554663-21554702)
chr5 (481-513)||(22499706-22499738)
[»] scaffold0028 (5 HSPs)
scaffold0028 (31-556)||(45981-46501)
scaffold0028 (31-556)||(51385-51905)
scaffold0028 (1-129)||(46326-46454)
scaffold0028 (1-129)||(51730-51858)
scaffold0028 (431-501)||(91740-91810)
[»] chr8 (40 HSPs)
chr8 (31-556)||(23825795-23826315)
chr8 (31-512)||(3698257-3698737)
chr8 (107-502)||(44432591-44432985)
chr8 (107-416)||(364517-364827)
chr8 (127-416)||(42559543-42559831)
chr8 (1-129)||(23825842-23825970)
chr8 (1-129)||(3698304-3698432)
chr8 (296-416)||(20494438-20494558)
chr8 (296-513)||(21325755-21325974)
chr8 (289-513)||(21321157-21321383)
chr8 (398-513)||(21299301-21299415)
chr8 (431-504)||(25623798-25623871)
chr8 (205-370)||(26859364-26859529)
chr8 (424-513)||(10607836-10607926)
chr8 (29-133)||(44432591-44432694)
chr8 (29-134)||(364517-364623)
chr8 (423-501)||(20011254-20011332)
chr8 (426-501)||(33089840-33089915)
chr8 (107-186)||(26222718-26222796)
chr8 (365-416)||(8413838-8413889)
chr8 (365-416)||(11775625-11775676)
chr8 (29-96)||(26222730-26222796)
chr8 (49-133)||(42559747-42559831)
chr8 (365-416)||(14397000-14397051)
chr8 (365-416)||(19882859-19882910)
chr8 (19-74)||(26220099-26220153)
chr8 (97-152)||(26220099-26220153)
chr8 (439-471)||(22520976-22521008)
chr8 (446-501)||(19989905-19989960)
chr8 (423-501)||(20004849-20004927)
chr8 (365-416)||(20387399-20387449)
chr8 (365-412)||(25483535-25483582)
chr8 (448-502)||(14415711-14415764)
chr8 (479-513)||(19987320-19987354)
chr8 (483-513)||(30765898-30765928)
chr8 (446-502)||(21282996-21283052)
chr8 (439-471)||(15268175-15268207)
chr8 (158-186)||(26220139-26220167)
chr8 (179-207)||(44432585-44432613)
chr8 (3-55)||(44432642-44432694)
[»] chr4 (37 HSPs)
chr4 (1-502)||(11208136-11208635)
chr4 (2-502)||(11201405-11201903)
chr4 (107-416)||(56114850-56115159)
chr4 (158-412)||(24046572-24046826)
chr4 (32-207)||(11208508-11208681)
chr4 (32-207)||(11201777-11201950)
chr4 (19-208)||(8574425-8574602)
chr4 (1-186)||(8574370-8574542)
chr4 (19-152)||(54798355-54798487)
chr4 (1-129)||(11201700-11201827)
chr4 (97-207)||(54798377-54798487)
chr4 (60-152)||(14280760-14280851)
chr4 (29-93)||(14280709-14280773)
chr4 (107-171)||(14280709-14280773)
chr4 (422-502)||(35461541-35461622)
chr4 (138-207)||(14280760-14280829)
chr4 (1-74)||(14280779-14280851)
chr4 (5-74)||(54798355-54798423)
chr4 (423-501)||(14822309-14822387)
chr4 (487-556)||(16157830-16157896)
chr4 (365-416)||(45005856-45005907)
chr4 (29-133)||(56115055-56115159)
chr4 (369-416)||(18230656-18230703)
chr4 (365-416)||(28386155-28386206)
chr4 (446-501)||(13898861-13898915)
chr4 (479-513)||(1650193-1650227)
chr4 (267-301)||(16297938-16297972)
chr4 (479-513)||(45141677-45141711)
chr4 (486-515)||(8045819-8045848)
chr4 (486-515)||(11848153-11848182)
chr4 (481-514)||(14507209-14507242)
chr4 (158-186)||(14280837-14280865)
chr4 (252-304)||(20325814-20325866)
chr4 (481-513)||(23122614-23122646)
chr4 (481-513)||(23723930-23723962)
chr4 (427-513)||(41528222-41528308)
chr4 (175-211)||(54798451-54798487)
[»] chr6 (56 HSPs)
chr6 (107-513)||(8759435-8759840)
chr6 (107-501)||(7430252-7430645)
chr6 (107-513)||(8767196-8767586)
chr6 (179-502)||(14593631-14593954)
chr6 (107-416)||(1254486-1254795)
chr6 (107-416)||(34296281-34296591)
chr6 (107-416)||(1017-1316)
chr6 (108-370)||(34140687-34140949)
chr6 (108-370)||(34153303-34153565)
chr6 (97-186)||(16448209-16448298)
chr6 (329-416)||(8188-8275)
chr6 (19-101)||(16448216-16448298)
chr6 (282-370)||(7680748-7680836)
chr6 (398-513)||(14725285-14725399)
chr6 (29-129)||(8767487-8767586)
chr6 (29-129)||(7430252-7430352)
chr6 (29-133)||(34296487-34296591)
chr6 (29-133)||(8759737-8759840)
chr6 (29-133)||(1254486-1254590)
chr6 (365-416)||(13765258-13765309)
chr6 (365-416)||(23225947-23225998)
chr6 (365-416)||(23956774-23956825)
chr6 (365-416)||(23415816-23415867)
chr6 (445-514)||(19819847-19819916)
chr6 (366-416)||(27557575-27557625)
chr6 (158-207)||(7680865-7680914)
chr6 (486-556)||(9187535-9187602)
chr6 (445-501)||(22910334-22910390)
chr6 (30-130)||(34140850-34140949)
chr6 (30-130)||(34153466-34153565)
chr6 (454-501)||(14995241-14995288)
chr6 (450-501)||(17026400-17026450)
chr6 (423-501)||(18315116-18315194)
chr6 (445-504)||(22888788-22888847)
chr6 (442-501)||(23106171-23106230)
chr6 (446-501)||(29266341-29266395)
chr6 (5-51)||(8767487-8767533)
chr6 (448-513)||(93664-93728)
chr6 (486-515)||(930082-930111)
chr6 (365-410)||(1588655-1588700)
chr6 (80-161)||(7680834-7680914)
chr6 (2-83)||(7680834-7680914)
chr6 (486-515)||(12168402-12168431)
chr6 (445-502)||(14583915-14583971)
chr6 (486-515)||(19287311-19287340)
chr6 (486-515)||(19785856-19785885)
chr6 (486-515)||(19878495-19878524)
chr6 (486-515)||(29614133-29614162)
chr6 (368-416)||(31021810-31021859)
chr6 (29-132)||(1017-1120)
chr6 (3-51)||(7430304-7430352)
chr6 (3-55)||(8759737-8759789)
chr6 (344-380)||(14583819-14583855)
chr6 (419-513)||(14615420-14615514)
chr6 (175-211)||(16448262-16448298)
chr6 (450-513)||(19587719-19587782)
[»] scaffold0546 (2 HSPs)
scaffold0546 (107-502)||(9845-10240)
scaffold0546 (29-133)||(10136-10240)
[»] scaffold0109 (2 HSPs)
scaffold0109 (107-502)||(3067-3462)
scaffold0109 (29-133)||(3067-3171)
[»] scaffold0635 (2 HSPs)
scaffold0635 (107-416)||(7613-7921)
scaffold0635 (29-101)||(7613-7684)
[»] scaffold0059 (2 HSPs)
scaffold0059 (87-370)||(49335-49617)
scaffold0059 (9-105)||(49335-49430)
[»] scaffold0599 (2 HSPs)
scaffold0599 (107-416)||(726-1035)
scaffold0599 (29-101)||(726-798)
[»] scaffold0077 (7 HSPs)
scaffold0077 (107-412)||(22197-22502)
scaffold0077 (158-416)||(17293-17550)
scaffold0077 (127-190)||(23316-23379)
scaffold0077 (49-112)||(23316-23379)
scaffold0077 (29-133)||(22398-22502)
scaffold0077 (29-74)||(17536-17580)
scaffold0077 (107-147)||(17541-17580)
[»] scaffold0026 (7 HSPs)
scaffold0026 (107-349)||(123643-123883)
scaffold0026 (423-501)||(36521-36599)
scaffold0026 (29-129)||(123784-123883)
scaffold0026 (426-501)||(143625-143700)
scaffold0026 (446-513)||(67190-67256)
scaffold0026 (3-51)||(123784-123832)
scaffold0026 (179-207)||(123861-123889)
[»] scaffold0104 (13 HSPs)
scaffold0104 (107-377)||(26655-26925)
scaffold0104 (107-377)||(28037-28307)
scaffold0104 (107-370)||(14579-14842)
scaffold0104 (138-370)||(16629-16862)
scaffold0104 (107-348)||(7948-8189)
scaffold0104 (138-348)||(18649-18860)
scaffold0104 (29-133)||(26655-26759)
scaffold0104 (29-133)||(28037-28141)
scaffold0104 (431-501)||(40797-40867)
scaffold0104 (29-126)||(7948-8044)
scaffold0104 (29-126)||(14579-14675)
scaffold0104 (179-207)||(7942-7970)
scaffold0104 (179-207)||(14573-14601)
[»] scaffold0379 (2 HSPs)
scaffold0379 (107-370)||(10429-10692)
scaffold0379 (29-101)||(10429-10500)
[»] scaffold0022 (4 HSPs)
scaffold0022 (19-207)||(116812-116999)
scaffold0022 (1-184)||(116872-117042)
scaffold0022 (97-208)||(116812-116923)
scaffold0022 (175-211)||(116812-116848)
[»] scaffold0577 (4 HSPs)
scaffold0577 (158-371)||(8735-8948)
scaffold0577 (108-198)||(6177-6266)
scaffold0577 (30-101)||(6177-6247)
scaffold0577 (29-74)||(8705-8749)
[»] scaffold0188 (2 HSPs)
scaffold0188 (107-186)||(36-115)
scaffold0188 (29-101)||(43-115)
[»] scaffold0601 (2 HSPs)
scaffold0601 (131-370)||(4310-4549)
scaffold0601 (53-133)||(4469-4549)
[»] scaffold0139 (2 HSPs)
scaffold0139 (423-501)||(2062-2140)
scaffold0139 (445-514)||(26850-26919)
[»] scaffold0003 (2 HSPs)
scaffold0003 (423-512)||(80296-80386)
scaffold0003 (423-512)||(100018-100108)
[»] scaffold0180 (1 HSPs)
scaffold0180 (423-501)||(13385-13463)
[»] scaffold0249 (1 HSPs)
scaffold0249 (367-501)||(5920-6056)
[»] scaffold0178 (1 HSPs)
scaffold0178 (423-500)||(26391-26468)
[»] scaffold0266 (2 HSPs)
scaffold0266 (423-501)||(23954-24032)
scaffold0266 (423-485)||(2874-2936)
[»] scaffold0046 (1 HSPs)
scaffold0046 (431-501)||(71524-71594)
[»] scaffold0192 (2 HSPs)
scaffold0192 (367-501)||(21743-21878)
scaffold0192 (445-514)||(7563-7632)
[»] scaffold2016 (1 HSPs)
scaffold2016 (427-494)||(1-68)
[»] scaffold0222 (2 HSPs)
scaffold0222 (423-513)||(4167-4258)
scaffold0222 (486-551)||(16860-16922)
[»] scaffold0201 (1 HSPs)
scaffold0201 (423-501)||(27255-27334)
[»] scaffold0203 (1 HSPs)
scaffold0203 (423-513)||(16405-16495)
[»] scaffold0008 (3 HSPs)
scaffold0008 (134-186)||(72221-72273)
scaffold0008 (440-501)||(124069-124130)
scaffold0008 (56-101)||(72221-72266)
[»] scaffold0297 (1 HSPs)
scaffold0297 (431-501)||(912-982)
[»] scaffold0165 (2 HSPs)
scaffold0165 (431-501)||(18786-18856)
scaffold0165 (431-501)||(501-570)
[»] scaffold0061 (1 HSPs)
scaffold0061 (398-512)||(56343-56456)
[»] scaffold0017 (1 HSPs)
scaffold0017 (398-512)||(142177-142290)
[»] scaffold0005 (1 HSPs)
scaffold0005 (423-501)||(17322-17400)
[»] scaffold0462 (1 HSPs)
scaffold0462 (431-498)||(8371-8438)
[»] scaffold0039 (1 HSPs)
scaffold0039 (423-501)||(2922-3000)
[»] scaffold0146 (1 HSPs)
scaffold0146 (486-556)||(13672-13739)
[»] scaffold1276 (1 HSPs)
scaffold1276 (361-416)||(1047-1102)
[»] scaffold0453 (1 HSPs)
scaffold0453 (365-416)||(7100-7151)
[»] scaffold0278 (1 HSPs)
scaffold0278 (365-416)||(23808-23859)
[»] scaffold0200 (1 HSPs)
scaffold0200 (365-416)||(18505-18556)
[»] scaffold0117 (1 HSPs)
scaffold0117 (365-416)||(42583-42634)
[»] scaffold0058 (2 HSPs)
scaffold0058 (365-416)||(39902-39953)
scaffold0058 (486-515)||(330-359)
[»] scaffold0001 (2 HSPs)
scaffold0001 (365-416)||(169351-169402)
scaffold0001 (365-416)||(176704-176755)
[»] scaffold1913 (1 HSPs)
scaffold1913 (446-502)||(825-880)
[»] scaffold0610 (1 HSPs)
scaffold0610 (423-514)||(6475-6567)
[»] scaffold0334 (1 HSPs)
scaffold0334 (368-416)||(2039-2087)
[»] scaffold0124 (1 HSPs)
scaffold0124 (486-556)||(34224-34291)
[»] scaffold0422 (1 HSPs)
scaffold0422 (365-416)||(3875-3926)
[»] scaffold0395 (1 HSPs)
scaffold0395 (446-501)||(1365-1419)
[»] scaffold0335 (1 HSPs)
scaffold0335 (446-501)||(7668-7722)
[»] scaffold0326 (2 HSPs)
scaffold0326 (423-462)||(4569-4608)
scaffold0326 (423-462)||(19751-19790)
[»] scaffold0293 (1 HSPs)
scaffold0293 (365-416)||(19389-19440)
[»] scaffold0151 (1 HSPs)
scaffold0151 (365-416)||(10006-10057)
[»] scaffold0091 (2 HSPs)
scaffold0091 (423-501)||(21913-21991)
scaffold0091 (423-501)||(26110-26188)
[»] scaffold0057 (1 HSPs)
scaffold0057 (446-501)||(1209-1263)
[»] scaffold0051 (1 HSPs)
scaffold0051 (365-411)||(32054-32100)
[»] scaffold0049 (2 HSPs)
scaffold0049 (431-501)||(42074-42144)
scaffold0049 (431-501)||(52769-52839)
[»] scaffold0348 (1 HSPs)
scaffold0348 (445-513)||(1141-1210)
[»] scaffold1765 (1 HSPs)
scaffold1765 (445-501)||(459-515)
[»] scaffold0535 (1 HSPs)
scaffold0535 (446-502)||(5210-5265)
[»] scaffold0253 (2 HSPs)
scaffold0253 (445-501)||(6238-6294)
scaffold0253 (445-501)||(15663-15719)
[»] scaffold0149 (1 HSPs)
scaffold0149 (445-501)||(27278-27334)
[»] scaffold0112 (1 HSPs)
scaffold0112 (131-187)||(12733-12789)
[»] scaffold0054 (2 HSPs)
scaffold0054 (445-501)||(10187-10243)
scaffold0054 (423-501)||(59593-59671)
[»] scaffold1290 (1 HSPs)
scaffold1290 (423-501)||(408-486)
[»] scaffold0575 (1 HSPs)
scaffold0575 (446-501)||(9467-9521)
[»] scaffold0506 (1 HSPs)
scaffold0506 (420-513)||(9164-9257)
[»] scaffold0322 (1 HSPs)
scaffold0322 (450-501)||(20193-20243)
[»] scaffold0007 (1 HSPs)
scaffold0007 (423-501)||(206871-206949)
[»] scaffold0002 (1 HSPs)
scaffold0002 (479-514)||(371392-371427)
[»] scaffold0363 (1 HSPs)
scaffold0363 (448-502)||(2944-2997)
[»] scaffold0243 (1 HSPs)
scaffold0243 (445-514)||(11460-11529)
[»] scaffold0108 (1 HSPs)
scaffold0108 (423-501)||(46463-46540)
[»] scaffold0050 (1 HSPs)
scaffold0050 (424-462)||(13769-13807)
[»] scaffold0924 (2 HSPs)
scaffold0924 (486-515)||(737-766)
scaffold0924 (388-461)||(3166-3238)
[»] scaffold0706 (1 HSPs)
scaffold0706 (445-513)||(2502-2570)
[»] scaffold0555 (1 HSPs)
scaffold0555 (421-462)||(2333-2374)
[»] scaffold0069 (1 HSPs)
scaffold0069 (441-502)||(35499-35560)
[»] scaffold0067 (2 HSPs)
scaffold0067 (436-512)||(55736-55812)
scaffold0067 (436-512)||(62122-62198)
[»] scaffold0029 (1 HSPs)
scaffold0029 (486-515)||(111922-111951)
[»] scaffold0020 (1 HSPs)
scaffold0020 (486-556)||(101875-101943)
[»] scaffold1853 (1 HSPs)
scaffold1853 (423-474)||(17-69)
[»] scaffold0371 (1 HSPs)
scaffold0371 (445-501)||(6141-6197)
[»] scaffold0239 (1 HSPs)
scaffold0239 (480-512)||(13628-13660)
[»] scaffold0160 (1 HSPs)
scaffold0160 (446-502)||(15846-15900)


Alignment Details
Target: chr2 (Bit Score: 462; Significance: 0; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 1 - 556
Target Start/End: Complemental strand, 6743799 - 6743248
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6743799 gaatcgcctcatgatttcgacagcatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 6743700  T
Q  101 gtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattac 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| ||    
T  6743699 gtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcac 6743600  T
Q  201 agatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccct 300  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6743599 agatttt-ctgcgattttctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccct 6743501  T
Q  301 atcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataat 400  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6743500 atcattaaaacgttaacccatcactaacctacctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataat 6743401  T
Q  401 caaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctt 500  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6743400 caaaacctaatcccaaatttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttacctt 6743301  T
Q  501 agttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttcatctc 556  Q
    ||||   |||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  6743300 agtt---cagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 6743248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Original strand, 43694056 - 43694575
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  43694056 catactaaaattacagatttt-ctgtcaaaattgcctcatgatcactagaatcgcctcatgatctcgacagtatcagacatactaaaattacagattttt 43694154  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  | |||||||| ||||| || |||||| |||||||||||     
T  43694155 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatcctaaaattacacatttt-ctacgattttctaccatgggaa 43694253  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43694254 cctccttggctccatctcttaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcattaaaacgttaacccatcactaacct 43694353  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  43694354 acctgattaaccactctttccaccattcaattctatggtttctacactttttcattc-aaaaccaataatcaaaacctaatcccaaatttctcaatttct 43694452  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  43694453 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 43694549  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  43694550 tgatcttggttctacttgttcttctc 43694575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 80 - 556
Target Start/End: Original strand, 201324 - 201796
Alignment:
Q  80 aatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 179  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  201324 aatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacag 201423  T
Q  180 catcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataa 279  Q
     |||||||||  |||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  201424 tatcagacatgctgaaatcacagatttt-ctgcgattttctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataa 201522  T
Q  280 acatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactt 379  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  201523 acatcaccgtatgattaccctatcattaaaacgttaacccatcactaacctacctgattaacaactcttttcaccattcaattttatggtttctacactt 201622  T
Q  380 tttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaa 479  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  201623 tttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattgaa 201722  T
Q  480 agtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttcatctc 556  Q
    ||||||||||| |||||||||||||   |||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  201723 agtaaatctcagccttaccttagtt---cagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 201796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 107 - 501
Target Start/End: Complemental strand, 21132976 - 21132583
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||||| |||||||    
T  21132976 gacatattgaaattacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcagacatattgaaattgcagattt 21132878  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |    
T  21132877 ttctgcgatttcctaccatgggagcctccttggctccaattcttaaccctaaactctccaaaatcatccataatcatcaccatatgatcaccctatcatt 21132778  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaac 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21132777 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaatcaataatcaaaac 21132678  T
Q  407 ctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  21132677 ctaatccgaaatttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatttatactattgaaagtaaaactcacccttacctta 21132583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 107 - 416
Target Start/End: Complemental strand, 10039457 - 10039149
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||| || | |||| |||||||||||    
T  10039457 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacgtgttgatattacagattt 10039359  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    ||||||||||| ||||||||||||||||||||||| |  ||||  ||||||||||||||||||| |||||||| |||||||||||||||||||||||| |    
T  10039358 ttctgcgattttctaccatgggagcctccttggctccgtttcttgaccctaaactctccaaaataatccataatcatcaccatatgattaccctatcatt 10039259  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaac 406  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10039258 aaaacgttaatccatcactaacctacctgattaaccactcttttccccgttcaattctatggtttctacactttttcattcaaaaatcaataatcaaaac 10039159  T
Q  407 ctaatcccaa 416  Q
    ||||||||||    
T  10039158 ctaatcccaa 10039149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 6743846 - 6743667
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  6743846 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagcatcagacatactaaaattacagattttt 6743748  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctg 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  6743747 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctg 6743667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 53 - 350
Target Start/End: Complemental strand, 26861687 - 26861392
Alignment:
Q  53 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgatt 152  Q
    ||||||||||||||| ||||| | | ||||||||||||||||| ||||| ||| |||||||| |||||||||||||  |||||  ||||||||||||||     
T  26861687 ctgtcaaaatcgcctaatgatcagtggaatcgcctcatgattttgacagaatcagacatactgaaattacagattt--ctgtcggaatcgcctcatgatc 26861590  T
Q  153 actagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaa 252  Q
      |  ||||||||||||||||| ||||||||||||||  |||||| ||| ||||||||||||||| ||||||||||||||||||||||| |  || || |    
T  26861589 tgtgaaatcgcctcatgatttctacagcatcagacatgctgaaatcacaaatttttctgcgattttctaccatgggagcctccttggctccgtttttcta 26861490  T
Q  253 ccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactctttt 350  Q
    | ||||| || |||||||||| | ||| | ||||||||| |||||||||||  || ||| ||||  | ||| ||||||||| ||||| ||||||||||    
T  26861489 ctctaaattcaccaaaatcatacctaatcttcaccatattattaccctatcgttagaacattaattcttcattaacctaccagattatccactctttt 26861392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 43694103 - 43694231
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43694103 gaatcgcctcatgatctcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 43694202  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| ||||||||||| |||||    
T  43694203 gtatcagacatcctaaaattacacatttt 43694231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 201324 - 201451
Alignment:
Q  2 aatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  201324 aatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacag 201423  T
Q  102 tatctgacatactaaaattacagatttt 129  Q
    |||| ||||| || |||| |||||||||    
T  201424 tatcagacatgctgaaatcacagatttt 201451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 25365139 - 25365061
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||||||||||||| |||||||||||||| || |||||||||| |||||||| |||||||||||||||    
T  25365139 caatttctaccagaaacatgttaaaccaaaatcagaattagaaactatactattgaaagtaaacctcacccttacctta 25365061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 21132976 - 21132873
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||| ||| | ||||||||||||||||||||| ||| |||||| | ||||| |||||||    
T  21132976 gacatattgaaattacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcagacatattgaaattgcagattt 21132878  T
Q  129 ttctg 133  Q
    |||||    
T  21132877 ttctg 21132873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 398 - 509
Target Start/End: Complemental strand, 22795902 - 22795792
Alignment:
Q  398 aatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttac 497  Q
    ||||||||||||  ||||| || | |||||||||||||||  | |||||| |||||||||||||| |||| |||||||| |||||||| |||||||||||    
T  22795902 aatcaaaacctagacccaaattcc-caatttctaccagaactaggttaaaccaaaatcagaattataatccatactattgaaagtaaacctcacccttac 22795804  T
Q  498 cttagttttgca 509  Q
    |||| |||||||    
T  22795803 cttaattttgca 22795792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 423 - 500
Target Start/End: Complemental strand, 24669043 - 24668966
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctt 500  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||| |||||| |||||||| | ||||||||||||    
T  24669043 caatttctaccagaaacctgttaaaccaaaatcagaattataatctacactattgaaagtaaaccccacccttacctt 24668966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 26861661 - 26861531
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||| ||||| ||| |||||||| ||||||||||  ||||||||  ||||||||||||||   |  ||||||||||||||||| |||    
T  26861661 gaatcgcctcatgattttgacagaatcagacatactgaaattacaga--tttctgtcggaatcgcctcatgatctgtgaaatcgcctcatgatttctaca 26861564  T
Q  101 gtatctgacatactaaaattacagatttttctg 133  Q
    | ||| ||||| || |||| ||| |||||||||    
T  26861563 gcatcagacatgctgaaatcacaaatttttctg 26861531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 10039457 - 10039386
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||||||||    
T  10039457 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacag 10039386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 426 - 501
Target Start/End: Original strand, 17634857 - 17634932
Alignment:
Q  426 tttctaccagaaacatgttaaatc-aaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| | |||| |||||||| |||||||||||||||    
T  17634857 tttctaccaaaaacatgttaaatccaaaatcagaattacaatctaca-tattgaaagtaaacctcacccttacctta 17634932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 439 - 507
Target Start/End: Original strand, 22841918 - 22841986
Alignment:
Q  439 catgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttg 507  Q
    |||||||||||||||||||||||| ||||||||  ||| | |||||| |||||||||||||||||||||    
T  22841918 catgttaaatcaaaatcagaattataatctatatcattgagagtaaacctcacccttaccttagttttg 22841986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 440 - 501
Target Start/End: Complemental strand, 21120820 - 21120759
Alignment:
Q  440 atgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||  |||| |||||||||    
T  21120820 atgttaaaccaaaatcagaattacaatctatactattgaaagtaaacatcactcttacctta 21120759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 31346031 - 31346082
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  31346031 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 31346082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 370
Target Start/End: Original strand, 13361711 - 13361924
Alignment:
Q  158 aatcgcctcatgatttcgacagcatcagac-atattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccct 256  Q
    |||||||||||||||| |||||||| |||| ||   ||||  | ||||||||||| |||||   |||||| |||| || ||| || |  || || |||||    
T  13361711 aatcgcctcatgattttgacagcattagaccatgcagaaaccatagatttttctgtgatttttcaccatgagagcgtcgttgactccgtttttcgaccct 13361810  T
Q  257 aaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccat 356  Q
    |||||| |||||||  ||| ||| ||||||||||||||||||||||||    |||  |||  |  || ||||||||| ||||| |||||||||||||| |    
T  13361811 aaactcgccaaaattgtccctaatcatcaccatatgattaccctatcatcgtaacactaattctccattaacctaccagattatccactcttttcaccgt 13361910  T
Q  357 tcaattctatggtt 370  Q
    | |||| |||||||    
T  13361911 ttaattttatggtt 13361924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 41301070 - 41301023
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatc 412  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||    
T  41301070 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatc 41301023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 201401 - 201451
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttt 51  Q
    ||||||||||||||||||||||||||| ||||| || |||| |||||||||    
T  201401 gaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt 201451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 410
Target Start/End: Complemental strand, 6477377 - 6477332
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaa 410  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||    
T  6477377 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaa 6477332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 21132925 - 21132873
Alignment:
Q  3 atcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctg 55  Q
    ||||||||||||||||||||| ||| |||||| | ||||| ||||||||||||    
T  21132925 atcgcctcatgatttcgacagcatcagacatattgaaattgcagatttttctg 21132873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 23149597 - 23149653
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||| |  ||||||||||||| | |||||| |||||||||||||||    
T  23149597 aaatcaaaatcagaactttaatctatactattgagagtaaacctcacccttacctta 23149653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 23561387 - 23561443
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||| |  ||||||||||||| | |||||| |||||||||||||||    
T  23561387 aaatcaaaatcagaactttaatctatactattgagagtaaacctcacccttacctta 23561443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 201296 - 201338
Alignment:
Q  109 catactaaaattacagatttttctgtcaaaatcgcctcatgatt 152  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
T  201296 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatt 201338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 21072829 - 21072778
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||    
T  21072829 atggtttttacacttttcaattcaaaaatcaataatcaaaatctaatcccaa 21072778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 514
Target Start/End: Complemental strand, 19702708 - 19702617
Alignment:
Q  423 caatttctaccagaaacatgttaaa-tcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    |||||||||||| |||| ||||||| |||||||||||||| | |||||| || ||| || ||||| ||||||||||||||||  ||||||||||    
T  19702708 caatttctacca-aaacctgttaaactcaaaatcagaattcagaatctacacaattgaa-gtaaacctcacccttaccttagaattgcagaaaa 19702617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 556
Target Start/End: Original strand, 23265182 - 23265250
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaatcgcacgacacactgttga-tcttggctctacttgttcatctc 556  Q
    |||||||||||||||| ||   ||||||||||||||||||||   ||| |||||||||||||||||| ||||    
T  23265182 tctcacccttaccttaatt---cagaaaatcgcacgacacacgaatgattcttggctctacttgttcttctc 23265250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 556
Target Start/End: Original strand, 23280250 - 23280318
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaatcgcacgacacactgttga-tcttggctctacttgttcatctc 556  Q
    |||||||||||||||| ||   ||||||||||||||||||||   ||| |||||||||||||||||| ||||    
T  23280250 tctcacccttaccttaatt---cagaaaatcgcacgacacacgaatgattcttggctctacttgttcttctc 23280318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 513
Target Start/End: Original strand, 23291907 - 23291975
Alignment:
Q  445 aaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||||  | |||||||||| | || | ||| |||||||||||||||||||||||||||    
T  23291907 aaatcaaaatcagaattcaatatctatactactgaa-gcaaacctcacccttaccttagttttgcagaaa 23291975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 513
Target Start/End: Original strand, 23333547 - 23333615
Alignment:
Q  445 aaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||||  | |||||||||| | || | ||| |||||||||||||||||||||||||||    
T  23333547 aaatcaaaatcagaattcaatatctatactactgaa-gcaaacctcacccttaccttagttttgcagaaa 23333615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 513
Target Start/End: Original strand, 24653299 - 24653367
Alignment:
Q  445 aaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||||||||||||| |  | ||| |||||| ||| |||| |||||||||||||||||||||||||||    
T  24653299 aaatcaaaatcagaatttatcaactacactattgaaa-taaacctcacccttaccttagttttgcagaaa 24653367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Original strand, 26583866 - 26583895
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  26583866 tctcacccttaccttagttttgcagaaaat 26583895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 207
Target Start/End: Complemental strand, 21132982 - 21132954
Alignment:
Q  179 gcatcagacatattgaaattacagatttt 207  Q
    |||||||||||||||||||||||||||||    
T  21132982 gcatcagacatattgaaattacagatttt 21132954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 431; Significance: 0; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 31 - 551
Target Start/End: Complemental strand, 42095413 - 42094897
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42095413 catactaaaattacacatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 42095314  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| | |||||||||||||| |||| |||| ||||||||||||    
T  42095313 ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttt-ctgcaattttctaccatgggag 42095215  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  42095214 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaacccatcacaaacct 42095115  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42095114 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttct 42095015  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  42095014 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 42094918  T
Q  531 tgatcttggctctacttgttc 551  Q
    ||||||||| |||||||||||    
T  42094917 tgatcttggttctacttgttc 42094897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Original strand, 21542711 - 21543231
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21542711 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 21542809  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| ||||||||| ||||||||| ||||||||||||    
T  21542810 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt-ctgcgattttctaccatgggag 21542908  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  21542909 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaacccatcactaacct 21543008  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21543009 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttct 21543108  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  21543109 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 21543205  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  21543206 tgatcttggttctacttgttcttctc 21543231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 49 - 501
Target Start/End: Complemental strand, 2332513 - 2332063
Alignment:
Q  49 ttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaatt-acagatttttctgtcaaaatcgcctca 147  Q
    ||||||||||||||||||||| ||| ||| | || ||||||  |||||||||| ||| |||||  | ||||| ||||||||| ||||||||||| |||||    
T  2332513 ttttctgtcaaaatcgcctcacgatcactgggattgcctcacaatttcgacagcatcagacatgttgaaatttacagatttt-ctgtcaaaatctcctca 2332415  T
Q  148 tgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaatt 247  Q
     ||| ||| | ||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||  |    
T  2332414 cgatcactgggatcgcctcacgatttcgacagcatcagacatattgaaattacatatttt-ctgcgattttctaccatgggagcctccttggctccatct 2332316  T
Q  248 ctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactct 347  Q
    || ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  2332315 cttaaccctaaactctccaaaatcatccataatcatcaccatgtgattaccctatcattagaacgttaacccatcactaatctacctgattaaccactct 2332216  T
Q  348 tttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaa 447  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  2332215 tttcaccattcaattatatggtttctacactttttcattc-aaaatcaataatcaaaacctaatcccaaatttcccaatttctaccagaaacatgttaaa 2332117  T
Q  448 tcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  2332116 tcaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 2332063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 42095365 - 42095237
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  42095365 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgaca 42095266  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| |||||||||||||||||||||||    
T  42095265 gtatcagacatactaaaattacagatttt 42095237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 21542758 - 21542886
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21542758 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 21542857  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| || |||| |||||||||    
T  21542858 gtatcagacatgctgaaatcacagatttt 21542886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 107 - 298
Target Start/End: Original strand, 45496675 - 45496855
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||||| |||||||||||||| ||||||||||||||||||||  ||| ||||| ||||||||||||||||          || |||||| ||||||||    
T  45496675 gacatactgaaattacagatttt-ctgtcaaaatcgcctcatgagcactggaatcacctcatgatttcgaca----------tactgaaatcacagattt 45496763  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattacc 298  Q
    ||||||||||| |||| |||| ||||||||||||| |  ||||  || ||||||||||||||||| ||||||| ||||||||||||||||||    
T  45496764 ttctgcgattttctactatggaagcctccttggctccgtttcttgactctaaactctccaaaatcgtccataatcatcaccatatgattacc 45496855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 5381587 - 5381665
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  5381587 caatttcaaccagaaacatgttaaaccaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 5381665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 426 - 501
Target Start/End: Complemental strand, 21744814 - 21744739
Alignment:
Q  426 tttctaccagaaacatgttaaat-caaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| | |||| |||||||| |||||||||||||||    
T  21744814 tttctaccagaaacatgttaaatccaaaatcagaattacaatctaca-tattgaaagtaaacctcacccttacctta 21744739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 45499234 - 45499286
Alignment:
Q  318 ccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45499234 ccatcactaacctacctgattaaccactcttttcaccgttcaattctatggtt 45499286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 21733637 - 21733559
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||| |||||| || | ||| |||| ||||||||||    
T  21733637 caatttctaccataaacatgttaaaccaaaatcagaattacaatctacactattgaaggcaaacctcagccttacctta 21733559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 45496675 - 45496745
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    |||||||| |||||||||||||| ||||||||||||||||||||  ||| ||||| ||||||||||||||||    
T  45496675 gacatactgaaattacagatttt-ctgtcaaaatcgcctcatgagcactggaatcacctcatgatttcgaca 45496745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 21665136 - 21665205
Alignment:
Q  445 aaatcaaaatcagaatta-caatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    |||||||||||||||||| | ||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  21665136 aaatcaaaatcagaattaaccatctacactattgaa-gtaaatctcacccttaccttagttttgcagaaaa 21665205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 431 - 501
Target Start/End: Complemental strand, 21986110 - 21986040
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  |||||||| |||||||||||||| |||||| |||||| |||||||| |||||||||||||||    
T  21986110 accagaactatgttaaaccaaaatcagaattataatctacactattgaaagtaaacctcacccttacctta 21986040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 19860128 - 19860197
Alignment:
Q  445 aaatcaaaatcagaatta-caatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    |||||||||||||||||| | ||||| |||||| || ||||| ||||||||||||||||||||||||||||    
T  19860128 aaatcaaaatcagaattaaccatctacactattgaa-gtaaacctcacccttaccttagttttgcagaaaa 19860197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 556
Target Start/End: Complemental strand, 19663532 - 19663465
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttcatctc 556  Q
    |||||||||||||||| ||   ||| |||||||||||||||| | ||||||||||||||||||||| ||||    
T  19663532 tctcacccttaccttattt---caggaaatcgcacgacacacgggtgatcttggctctacttgttcttctc 19663465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 508 - 551
Target Start/End: Original strand, 18712858 - 18712901
Alignment:
Q  508 cagaaaatcgcacgacacactgttgatcttggctctacttgttc 551  Q
    |||||||||||||||||||| | |||||||||||||||||||||    
T  18712858 cagaaaatcgcacgacacacggatgatcttggctctacttgttc 18712901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 22130166 - 22130119
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatc 412  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||    
T  22130166 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatc 22130119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 24960860 - 24960914
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||||||| |||||||||||||| | |||||| |||||||||||||||    
T  24960860 aatcaaaatcagaatt-caatctatactattgagagtaaacctcacccttacctta 24960914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 28313260 - 28313311
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  28313260 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 28313311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 45574160 - 45574109
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||||||| |||||||  ||||||||| |||||||||||||||||||||||    
T  45574160 atggtttctgcacttttcaattcaaaaatcaataatcaaaacctaatcccaa 45574109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 514
Target Start/End: Complemental strand, 19665885 - 19665850
Alignment:
Q  479 aagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||| ||||||||||||||||||||||||||||    
T  19665885 aagtaaacctcacccttaccttagttttgcagaaaa 19665850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 513
Target Start/End: Complemental strand, 19777885 - 19777792
Alignment:
Q  420 tctcaatttctaccagaaacatgttaaa-tcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||| ||||||| |||| ||||||| |||||||||||||| | |||| |||| ||| || ||||| |||||||||||||||| ||||||||||    
T  19777885 tctcaatctctacca-aaacctgttaaactcaaaatcagaattcagaatcaatacaattgaa-gtaaacctcacccttaccttagatttgcagaaa 19777792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 513
Target Start/End: Complemental strand, 20941016 - 20940985
Alignment:
Q  482 taaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||||||||||||||||||||||||||||    
T  20941016 taaatctcacccttaccttagttttgcagaaa 20940985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 21699057 - 21699135
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||| |||||||||||||| | |||||||||| |  ||| ||| |||||||||||||||    
T  21699057 caatttctaccataaacctgttaaaccaaaatcagaattaaacatctatactact-gaagcaaacctcacccttacctta 21699135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 23634471 - 23634549
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||| ||||||||||||| | |||||||||||   |||| ||| |||||||||||||||    
T  23634471 caatttctaccataaacctgttaaaccaaaatcagaattaaaaatctatacta-ccaaagcaaacctcacccttacctta 23634549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 462
Target Start/End: Complemental strand, 31926530 - 31926491
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatta 462  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  31926530 caatttctaccataaacctgttaaatcaaaatcagaatta 31926491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 513
Target Start/End: Complemental strand, 16882714 - 16882680
Alignment:
Q  479 aagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||| |||||||||||||||||||||||||||    
T  16882714 aagtaaacctcacccttaccttagttttgcagaaa 16882680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 19853993 - 19854062
Alignment:
Q  445 aaatcaaaatcagaatta-caatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    |||||||||||||||||| | |||||  ||||| || ||||| ||||||||||||||||||||| ||||||    
T  19853993 aaatcaaaatcagaattaaccatctacgctattgaa-gtaaacctcacccttaccttagttttgtagaaaa 19854062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 21736097 - 21736166
Alignment:
Q  445 aaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||||||||||||||   ||||| |||||| || ||||| |||||||||||||| |||||||||||||    
T  21736097 aaatcaaaatcagaattaagtatctacactattgaa-gtaaacctcacccttacctttgttttgcagaaaa 21736166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 406
Target Start/End: Complemental strand, 13527855 - 13527814
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaac 406  Q
    |||||||||||||||||  ||||||||| |||||||||||||    
T  13527855 atggtttctacacttttcaattcaaaaatcaataatcaaaac 13527814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Original strand, 41112074 - 41112103
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  41112074 tctcacccttaccttagttttgcagaaaat 41112103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 501
Target Start/End: Original strand, 41315208 - 41315269
Alignment:
Q  440 atgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||| |||||||| || | || |||| | |||| ||||||||||||||||||||||||    
T  41315208 atgttaaaccaaaatcaaaaattcattctacattattgaaagtaaatctcacccttacctta 41315269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 513
Target Start/End: Complemental strand, 3705934 - 3705902
Alignment:
Q  481 gtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||| |||||||||||||||||||||||||||    
T  3705934 gtaaacctcacccttaccttagttttgcagaaa 3705902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 424; Significance: 0; HSPs: 6)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Original strand, 39056 - 39576
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39056 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 39154  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| ||||||||| ||||||||| ||||||||||||    
T  39155 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt-ctgcgattttctaccatgggag 39253  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  39254 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaacccatcactaacct 39353  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39354 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttct 39453  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  39454 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 39550  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  39551 tgatcttggttctacttgttcttctc 39576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 39103 - 39231
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39103 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 39202  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| || |||| |||||||||    
T  39203 gtatcagacatgctgaaatcacagatttt 39231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 37077 - 37131
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  37077 aatcaaaatcagaatt-caatctatactattgaaagtaaacctcacccttacctta 37131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 29483 - 29537
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||| ||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  29483 aatcagaattagaatt-caatctatactattgaaagtaaatctcacccttacctta 29537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 513
Target Start/End: Complemental strand, 45965 - 45897
Alignment:
Q  445 aaatcaaaatcagaatta-caatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||||| | ||||| |||||| || ||||| ||||||||||||||| |||||||||||    
T  45965 aaatcaaaatcagaattaaccatctacactattgaa-gtaaacctcacccttaccttacttttgcagaaa 45897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 513
Target Start/End: Complemental strand, 50238 - 50170
Alignment:
Q  445 aaatcaaaatcagaatta-caatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||||| | ||||| |||||| || ||||| ||||||||||||||| |||||||||||    
T  50238 aaatcaaaatcagaattaaccatctacactattgaa-gtaaacctcacccttaccttacttttgcagaaa 50170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 424; Significance: 0; HSPs: 4)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Complemental strand, 29667 - 29147
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29667 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 29569  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| ||||||||| ||||||||| ||||||||||||    
T  29568 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt-ctgcgattttctaccatgggag 29470  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  29469 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaacccatcactaacct 29370  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29369 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttct 29270  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  29269 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 29173  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  29172 tgatcttggttctacttgttcttctc 29147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Complemental strand, 35068 - 34548
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35068 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 34970  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| ||||||||| ||||||||| ||||||||||||    
T  34969 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt-ctgcgattttctaccatgggag 34871  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  34870 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaacccatcactaacct 34771  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34770 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttct 34671  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  34670 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 34574  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  34573 tgatcttggttctacttgttcttctc 34548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 29620 - 29492
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29620 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 29521  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| || |||| |||||||||    
T  29520 gtatcagacatgctgaaatcacagatttt 29492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 35021 - 34893
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35021 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 34922  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| || |||| |||||||||    
T  34921 gtatcagacatgctgaaatcacagatttt 34893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 424; Significance: 0; HSPs: 6)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Complemental strand, 174083 - 173563
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  174083 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 173985  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| ||||||||| ||||||||| ||||||||||||    
T  173984 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt-ctgcgattttctaccatgggag 173886  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  173885 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaacccatcactaacct 173786  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  173785 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttct 173686  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  173685 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 173589  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  173588 tgatcttggttctacttgttcttctc 173563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 174036 - 173908
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  174036 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 173937  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| || |||| |||||||||    
T  173936 gtatcagacatgctgaaatcacagatttt 173908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 252805 - 252874
Alignment:
Q  445 aaatcaaaatcagaatta-caatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    |||||||||||||||||| | ||||| |||||| || ||||| ||||||||||||||||||||||||||||    
T  252805 aaatcaaaatcagaattaaccatctacactattgaa-gtaaacctcacccttaccttagttttgcagaaaa 252874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 259411 - 259480
Alignment:
Q  445 aaatcaaaatcagaatta-caatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    |||||||||||||||||| | ||||| |||||| || ||||| ||||||||||||||||||||||||||||    
T  259411 aaatcaaaatcagaattaaccatctacactattgaa-gtaaacctcacccttaccttagttttgcagaaaa 259480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 502
Target Start/End: Original strand, 153282 - 153337
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||    
T  153282 aatcaaaatcagaatt-caatctatactattgagagtaaacctcacccttaccttag 153337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 439 - 502
Target Start/End: Complemental strand, 20863 - 20800
Alignment:
Q  439 catgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||||||||||||||| ||||||||  ||| | ||| || ||||||||||||||||    
T  20863 catgttaaatcaaaatcagaattataatctatatcattgagagttaacctcacccttaccttag 20800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 424; Significance: 0; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Original strand, 19616950 - 19617470
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19616950 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 19617048  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| ||||||||| ||||||||| ||||||||||||    
T  19617049 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt-ctgcgattttctaccatgggag 19617147  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  19617148 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaacccatcactaacct 19617247  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19617248 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttct 19617347  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  19617348 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 19617444  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  19617445 tgatcttggttctacttgttcttctc 19617470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 31 - 512
Target Start/End: Original strand, 27565493 - 27565962
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| |||||| |||||||||| || |||||| ||| ||||||||||||||||| ||||||    
T  27565493 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcactagagtcgcctcatgtttccgacagcatcagacatactaaaattacacattttt 27565591  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| |||||||||           |||||||||||     
T  27565592 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt-----------ctaccatgggaa 27565680  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  27565681 cctccttggctccatctcttaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcattaaaacgttaaaccatcactaacct 27565780  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||| ||   ||||||||    
T  27565781 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcatacaaaaatcaataatcaaaacataatcccaaattaaccaatttct 27565880  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaa 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||||    
T  27565881 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttaaatttgcagaa 27565962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 127 - 501
Target Start/End: Original strand, 38828810 - 38829183
Alignment:
Q  127 ttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatg 226  Q
    ||||||||||||||||||||| ||| ||| | ||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  38828810 ttttctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcagacatattggaattacagatttt-ctgcgattttctaccatg 38828908  T
Q  227 ggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcacta 326  Q
    ||||||||||||||| ||  ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||    
T  38828909 ggagcctccttggctccatctcttaaccctaaactctccaaaatcatccataatcatcaccatatgattaccctatcattaaaacgttaatccatcacta 38829008  T
Q  327 acctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaat 426  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  38829009 acctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaaatttcccaat 38829108  T
Q  427 ttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  38829109 ttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 38829183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 158 - 416
Target Start/End: Original strand, 15214258 - 15214516
Alignment:
Q  158 aatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaacccta 257  Q
    |||||||||| ||||||||| |||||| ||||  ||| |||||||||||||||||||||| ||||||||||||||||||||||| |  || |  ||||||    
T  15214258 aatcgcctcacgatttcgaccgcatcatacatgctgatattacagatttttctgcgattttctaccatgggagcctccttggctccgttttttgacccta 15214357  T
Q  258 aactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccatt 357  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| | ||||||||| |||||||||||||||| |||||||||||||||||||| ||    
T  15214358 aactctccaaaatcatccataatcgtcaccatatgattaccctatcattgaaacgttaatccatcactaacctacccgattaaccactcttttcaccgtt 15214457  T
Q  358 caattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  15214458 caattatatggtttctacattttttcattcaaaagtcaataatcaaaacctaatcccaa 15214516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 107 - 370
Target Start/End: Complemental strand, 13745099 - 13744837
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||||||| ||||| ||||  |||||| ||  ||||    
T  13745099 gacatactaaaattacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacatcatcatacatgctgaaatcacttattt 13745001  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    ||||||||||| ||||||||||||||||||||||| |  ||||  |||||||||||||||||||| |||||||  || |||||||||||||||||||| |    
T  13745000 ttctgcgattttctaccatgggagcctccttggctccgtttcttgaccctaaactctccaaaatcgtccataattataaccatatgattaccctatcatt 13744901  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13744900 agaacgttaatccatcactaacctacctgattaaccactcttttcaccgttcaattctatggtt 13744837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 48273836 - 48274042
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48273836 gaatcgcctcatgatttcgacagcatcaaacatactaaaattacagttttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgaca 48273935  T
Q  101 gtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattac 200  Q
    | |||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | |||||||    
T  48273936 gcatcaaacatactaaaattacagttttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacaacatcagacatactaaaattac 48274035  T
Q  201 agatttt 207  Q
    |||||||    
T  48274036 agatttt 48274042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 107 - 377
Target Start/End: Original strand, 32772057 - 32772328
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||| ||||  ||| ||||||||||    
T  32772057 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacatgctgatattacagatt 32772155  T
Q  206 tttct-gcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatca 304  Q
    ||| | ||||||| ||||||||||||||||||||||| |  || |  |||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||    
T  32772156 ttttttgcgattttctaccatgggagcctccttggctccgttttttgaccctaaactctccaaaatcattcataatcatcatcatctgattaccctatca 32772255  T
Q  305 ataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacac 377  Q
     ||||||||||| |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||    
T  32772256 ttaaaacgttaatccatcactaacctatccgattaaccactcttttcaccgttcaattctatggtttctacac 32772328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 48273776 - 48273968
Alignment:
Q  19 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaa 118  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||    
T  48273776 gacagcatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcaaacatactaaaa 48273875  T
Q  119 ttacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctg 211  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||||| ||||||||    
T  48273876 ttacagttttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcaaacatactaaaattacagttttttctg 48273968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 107 - 370
Target Start/End: Complemental strand, 36685572 - 36685310
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||||| |||||||| ||||| ||||||| ||||||||| ||| | | ||||||||||| |||||||||||||||| ||||  |||||| ||| ||||    
T  36685572 gacatactgaaattacaaatttt-ctgtcaatatcgcctcacgatcaatggaatcgcctcacgatttcgacagcatcatacatgctgaaatcacatattt 36685474  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    |||| |||||| ||||||| ||||||||||||||| |  ||||  |||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |    
T  36685473 ttctacgattttctaccataggagcctccttggctccgtttcttgaccctaaactctccaaaatcgtccataatcatcaccatatgattaccccatcatt 36685374  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  36685373 aaaacgttaatccatcactaccctacctgattaaccactcttttcactgttcaattctatggtt 36685310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 108 - 370
Target Start/End: Complemental strand, 30820578 - 30820317
Alignment:
Q  108 acatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttt 207  Q
    ||||||| |||||||||||||| |||||||||||| |||| ||| ||| | ||||| ||| |||||||||| ||||| ||||  |||||| |||||||||    
T  30820578 acatactgaaattacagatttt-ctgtcaaaatcgtctcacgatcactgggatcgcgtcacgatttcgacaacatcatacatgctgaaatcacagatttt 30820480  T
Q  208 tctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaata 307  Q
    |||||||||| ||||||||||||||| ||||||| |  ||||  ||| |||||||||||||||| ||||||| ||||||| |||||||||||||||| ||    
T  30820479 tctgcgattttctaccatgggagccttcttggctccgtttcttgaccttaaactctccaaaatcgtccataatcatcaccgtatgattaccctatcatta 30820380  T
Q  308 aaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  30820379 aaacgttaatccatcactaccctacctggttaaccactcttttcaccgttcaattctatggtt 30820317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 48273914 - 48274098
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48273914 gaatcgcctcatgatttcgacagcatcaaacatactaaaattacagttttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgaca 48274013  T
Q  101 gtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
      ||| ||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48274014 acatcagacatactaaaattacagatttt-ctgtcgaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcaga 48274098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 19616997 - 19617125
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19616997 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 19617096  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| || |||| |||||||||    
T  19617097 gtatcagacatgctgaaatcacagatttt 19617125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 29 - 208
Target Start/End: Complemental strand, 10063535 - 10063369
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||    
T  10063535 gacatactaaaat-acagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcagacatactaaaattacaga-tt 10063438  T
Q  129 ttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattttt 208  Q
    |||||           ||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  10063437 ttctg-----------tcatgatcactagaatcgcctcatgatttcgacagcatcagacatactaaaattacagattttt 10063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 10063486 - 10063319
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||           |||| ||||||||||||||||||||||||||    
T  10063486 gaatcgcctcatgatttcgacagcatcagacatactaaaattacagatttt-ctgtca-----------tgatcactagaatcgcctcatgatttcgaca 10063399  T
Q  101 gtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagca 181  Q
    | ||| |||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  10063398 gcatcagacatactaaaattacagattttt-tgtcgaaatcgcctcatgatcactagaatcgcctcatgaattcgacagca 10063319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 27565543 - 27565668
Alignment:
Q  4 tcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagta 103  Q
    |||||||||| || |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27565543 tcgcctcatgtttccgacagcatcagacatactaaaattacacatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagta 27565642  T
Q  104 tctgacatactaaaattacagatttt 129  Q
    || ||||| || |||| |||||||||    
T  27565643 tcagacatgctgaaatcacagatttt 27565668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 427 - 494
Target Start/End: Original strand, 23443153 - 23443220
Alignment:
Q  427 ttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcaccct 494  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||    
T  23443153 ttctaccagaaacatgttaaaccaaaatcagaattacaatctatactattgaaattaaacctcaccct 23443220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 13745099 - 13745029
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| ||||||||||    
T  13745099 gacatactaaaattacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgaca 13745029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 483 - 556
Target Start/End: Original strand, 4281155 - 4281225
Alignment:
Q  483 aaatctcacccttaccttagttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttcatctc 556  Q
    ||||||||||||||||||||||   ||||||||||||||| |||| ||||||||||| ||||||||||| ||||    
T  4281155 aaatctcacccttaccttagtt---cagaaaatcgcacgatacacggttgatcttggttctacttgttcttctc 4281225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 431 - 501
Target Start/End: Complemental strand, 14249741 - 14249671
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  |||||||| |||||||||||||| |||||| |||||| |||||||| |||||||||||||||    
T  14249741 accagaactatgttaaaccaaaatcagaattataatctacactattgaaagtaaacctcacccttacctta 14249671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 32772057 - 32772158
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||| ||||||||||| |||  |||| || | ||||||||||    
T  32772057 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacatgctgatattacagatt 32772155  T
Q  128 ttt 130  Q
    |||    
T  32772156 ttt 32772158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 38828810 - 38828890
Alignment:
Q  49 ttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttt 129  Q
    ||||||||||||||||||||| ||| ||| | ||||||||| ||||||||||| ||| |||||| |  |||||||||||||    
T  38828810 ttttctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcagacatattggaattacagatttt 38828890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 1856541 - 1856490
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  1856541 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 1856490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 13917713 - 13917662
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  13917713 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 13917662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 16107999 - 16107948
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  16107999 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 16107948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 25926440 - 25926389
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  25926440 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 25926389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 42374445 - 42374394
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  42374445 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 42374394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 431 - 501
Target Start/End: Complemental strand, 14265211 - 14265141
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  ||||||||  ||||||||||||| |||||| |||||| |||||||| |||||||||||||||    
T  14265211 accagaactatgttaaactaaaatcagaattataatctacactattgaaagtaaacctcacccttacctta 14265141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 502
Target Start/End: Original strand, 1613548 - 1613603
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||    
T  1613548 aatcaaaatcagaatt-caatctatactattgagagtaaacctcacccttaccttag 1613603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 412
Target Start/End: Original strand, 13648193 - 13648240
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatc 412  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||    
T  13648193 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatc 13648240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 14580773 - 14580695
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||||||||||||||||| | ||||||||||| |  ||| ||| |||||||||||||||    
T  14580773 caatttctaccataaacttgttaaatcaaaatcagaattaaaaatctatactact-gaagcaaacctcacccttacctta 14580695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 30820578 - 30820476
Alignment:
Q  30 acatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttt 129  Q
    ||||||| |||||||||||||| |||||||||||| |||| ||| ||| | ||||| ||| ||||||||||  |||  |||| || |||| |||||||||    
T  30820578 acatactgaaattacagatttt-ctgtcaaaatcgtctcacgatcactgggatcgcgtcacgatttcgacaacatcatacatgctgaaatcacagatttt 30820480  T
Q  130 tctg 133  Q
    ||||    
T  30820479 tctg 30820476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 36685572 - 36685470
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    |||||||| |||||||| ||||| ||||||| ||||||||| ||| | | ||||||||||| ||||||||||| |||  |||| || |||| ||| ||||    
T  36685572 gacatactgaaattacaaatttt-ctgtcaatatcgcctcacgatcaatggaatcgcctcacgatttcgacagcatcatacatgctgaaatcacatattt 36685474  T
Q  129 ttct 132  Q
    ||||    
T  36685473 ttct 36685470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 501
Target Start/End: Original strand, 19146493 - 19146563
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  |||| ||| |||||||||||||||||||||  ||||| |||| ||| |||||||||||||||    
T  19146493 accagaactatgtcaaaccaaaatcagaattacaatctaccctattgaaagcaaacctcacccttacctta 19146563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 501
Target Start/End: Original strand, 20745892 - 20745962
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  |||| ||| |||||||||||||||||||||  ||||| |||| ||| |||||||||||||||    
T  20745892 accagaactatgtcaaaccaaaatcagaattacaatctaccctattgaaagcaaacctcacccttacctta 20745962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27565618 - 27565668
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttt 51  Q
    ||||||||||||||||||||||||||| ||||| || |||| |||||||||    
T  27565618 gaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt 27565668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 481 - 514
Target Start/End: Original strand, 14129211 - 14129244
Alignment:
Q  481 gtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||||||||||||||||||||||||||||||    
T  14129211 gtaaatctcacccttaccttagttttgcagaaaa 14129244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 481 - 514
Target Start/End: Original strand, 14136057 - 14136090
Alignment:
Q  481 gtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||||||||||||||||||||||||||||||    
T  14136057 gtaaatctcacccttaccttagttttgcagaaaa 14136090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 481 - 514
Target Start/End: Original strand, 14433029 - 14433062
Alignment:
Q  481 gtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||||||||||||||||||||||||||||||    
T  14433029 gtaaatctcacccttaccttagttttgcagaaaa 14433062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 439 - 500
Target Start/End: Complemental strand, 21518369 - 21518308
Alignment:
Q  439 catgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctt 500  Q
    ||||||||||||||||||||||||||| |||||  ||| | ||| || ||||||||||||||    
T  21518369 catgttaaatcaaaatcagaattacaacctatatcattgagagttaacctcacccttacctt 21518308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 16667653 - 16667597
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||| |  ||||||||||||| | |||||| |||||||||||||||    
T  16667653 aaatcaaaatcagaactttaatctatactatttagagtaaacctcacccttacctta 16667597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 17642023 - 17641967
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||| |  ||||||||||||| | |||||| |||||||||||||||    
T  17642023 aaatcaaaatcagaactttaatctatactatttagagtaaacctcacccttacctta 17641967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 498
Target Start/End: Original strand, 20752146 - 20752280
Alignment:
Q  365 atggtttctacacttttt--cattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaatta 462  Q
    |||||||||||||| |||  ||| ||||| | || ||||| || |||| ||||| || || |||||  |||||||  |||| ||| ||||||||||||||    
T  20752146 atggtttctacactcttttccatccaaaatcaaagaatcataaactaa-cccaaattcctaaattttaaccagaactatgtcaaaccaaaatcagaatta 20752244  T
Q  463 caatctatactattaaaagtaaatctcacccttacc 498  Q
    |||| || |||||| |||| ||| ||||||||||||    
T  20752245 caatatacactattgaaagcaaacctcacccttacc 20752280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 11662017 - 11662068
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||||| |||||||||  ||||||||| ||||||||||||| |||||||||    
T  11662017 atggtttttacacttttcaattcaaaaatcaataatcaaaacataatcccaa 11662068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 501
Target Start/End: Original strand, 12695568 - 12695627
Alignment:
Q  442 gttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||| ||||||||||||| || |||| | |||| |||||||| |||||||||||||||    
T  12695568 gttaaaccaaaatcagaatttcattctacattattgaaagtaaacctcacccttacctta 12695627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 416
Target Start/End: Original strand, 13256608 - 13256655
Alignment:
Q  369 tttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||  |||||||||  ||||||||||||||||||||||    
T  13256608 tttctacacttttcaattcaaaaataaataatcaaaacctaatcccaa 13256655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 14188434 - 14188383
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||||||||||| |||  ||||||||| |||||||||||| ||||||||||    
T  14188434 atggtttctacacatttcaattcaaaaatcaataatcaaaagctaatcccaa 14188383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 15143161 - 15143239
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| ||||  |||||| ||||||||||||| | ||||||||||| |  ||||||| |||||||||||||||    
T  15143161 caatttctaccataaacccgttaaaccaaaatcagaattaaaaatctatactact-gaagtaaacctcacccttacctta 15143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 498
Target Start/End: Original strand, 19152814 - 19152881
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacc 498  Q
    |||||||  |||| ||| |||||||||||||||||| || |||||| |||| ||| ||||||||||||    
T  19152814 accagaactatgtcaaaccaaaatcagaattacaatatacactattgaaagcaaacctcacccttacc 19152881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 45186397 - 45186475
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||| |||||||||||||| | |||||||||| |  ||| ||| |||||||||||||||    
T  45186397 caatttctaccataaacctgttaaaccaaaatcagaattaaacatctatactact-gaagcaaacctcacccttacctta 45186475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 514
Target Start/End: Complemental strand, 46347921 - 46347886
Alignment:
Q  479 aagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||| ||||||||||||||||||||||||||||    
T  46347921 aagtaaacctcacccttaccttagttttgcagaaaa 46347886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 501
Target Start/End: Complemental strand, 15436785 - 15436708
Alignment:
Q  424 aatttctaccagaaacatgttaaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||| |||| ||||||| |||||||||||||| | ||||| |||| |  ||||||| |||||||||||||||    
T  15436785 aatttctaccataaacctgttaaaccaaaatcagaattaaacatctacactact-gaagtaaacctcacccttacctta 15436708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 514
Target Start/End: Original strand, 12429794 - 12429862
Alignment:
Q  446 aatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    |||||||||||||||| |  ||||| |||||| || ||||| ||||| ||||||||||||||||||||||    
T  12429794 aatcaaaatcagaatttagcatctacactattgaa-gtaaacctcactcttaccttagttttgcagaaaa 12429862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Complemental strand, 12590659 - 12590630
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  12590659 tctcacccttaccttagttttgcagaaaat 12590630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Original strand, 13007471 - 13007500
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  13007471 tctcacccttaccttagttttgcagaaaat 13007500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 410
Target Start/End: Complemental strand, 15727506 - 15727461
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaa 410  Q
    |||||||||||||||||  ||||||||| | |||||||||||||||    
T  15727506 atggtttctacacttttcaattcaaaaatctataatcaaaacctaa 15727461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 513
Target Start/End: Original strand, 15339836 - 15339868
Alignment:
Q  481 gtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||| |||||||||||||||||||||||||||    
T  15339836 gtaaacctcacccttaccttagttttgcagaaa 15339868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 471
Target Start/End: Original strand, 15690926 - 15690958
Alignment:
Q  439 catgttaaatcaaaatcagaattacaatctata 471  Q
    |||||||||||||||||||||||| ||||||||    
T  15690926 catgttaaatcaaaatcagaattataatctata 15690958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 471
Target Start/End: Original strand, 15698519 - 15698551
Alignment:
Q  439 catgttaaatcaaaatcagaattacaatctata 471  Q
    |||||||||||||||||||||||| ||||||||    
T  15698519 catgttaaatcaaaatcagaattataatctata 15698551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 424; Significance: 0; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Original strand, 14085186 - 14085706
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14085186 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 14085284  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| ||||||||| ||||||||| ||||||||||||    
T  14085285 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt-ctgcgattttctaccatgggag 14085383  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  14085384 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaacccatcactaacct 14085483  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14085484 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttct 14085583  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  14085584 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 14085680  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  14085681 tgatcttggttctacttgttcttctc 14085706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Original strand, 14090587 - 14091107
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14090587 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 14090685  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| ||||||||| ||||||||| ||||||||||||    
T  14090686 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt-ctgcgattttctaccatgggag 14090784  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  14090785 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaacccatcactaacct 14090884  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14090885 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttct 14090984  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  14090985 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 14091081  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  14091082 tgatcttggttctacttgttcttctc 14091107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 556
Target Start/End: Original strand, 49400175 - 49400706
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49400175 gaatcgcctcatgatttcgacagtatcagacatactaaaattatagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 49400274  T
Q  101 gtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattac 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||                    ||||||||||||||||| |||||||||  | |||||||    
T  49400275 gtatcagacatactaaaattacagatttttctgtcaaaatcg--------------------cctcatgatttcgacagtatcagacatcctaaaattac 49400354  T
Q  201 agatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccct 300  Q
    | ||||| ||||||||| ||||||||||| ||||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49400355 acatttt-ctgcgattttctaccatgggaacctccttggctccatctcttaaccctaaactctccaaaatcatccataaacatcaccatatgattaccct 49400453  T
Q  301 atcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataat 400  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49400454 atcattaaaacgttaacccatcactaacctacctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataat 49400553  T
Q  401 caaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctt 500  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49400554 caaaacctaatcccaaatttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttacctt 49400653  T
Q  501 agttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttcatctc 556  Q
    ||||   |||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  49400654 agtt---cagaaaatcgcacgacacacggttgatcttggttctacttgttcttctc 49400706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 31 - 513
Target Start/End: Complemental strand, 24122725 - 24122246
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24122725 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 24122627  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||  | |||||||| ||||| ||||||||| |||||||||||     
T  24122626 ctgtcaaaatcgcctcatgatttctagaatcgactcatgatttcgacagtatcagacatcctaaaattacacatttt-ctgcgattttctaccatgggaa 24122528  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24122527 cctccttggctccatctcttaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcattaaaacgttaacccatcactaacct 24122428  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  24122427 acctgattaaccactctttccaccattcaattctatggtttctacactttttcattc-aaaaccaataatcaaaacctaatcccaaatttctcaatttct 24122329  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24122328 accagaaacatgttaaatcaaaatcaaaattacaatctatactattgaaagtaaatctcacccttaccttagttttgcagaaa 24122246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 31 - 512
Target Start/End: Complemental strand, 12270950 - 12270472
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgatt-actagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttt 129  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||    
T  12270950 catactaaaattacacatttt-ctgtcaaaatcgcctcatgattcactagaatcgcctcatgatttcgacagcatcagacatactaaaattacacaattt 12270852  T
Q  130 tctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatggga 229  Q
     ||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||| |||||||| ||||| |||| |||| ||||||||||     
T  12270851 -ctgtcaaaatcgcctcatgatcactagaattgcctcatgatttcgacagtatcagacatattaaaattacacatttt-ctgcaattttctaccatgggg 12270754  T
Q  230 gcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacc 329  Q
     ||||||||||| ||  ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12270753 acctccttggctccatctcttaaccctaaactctccaaaatcatccataatcatcaccatatgattaccctatcattaaaacgttaacccatcactaacc 12270654  T
Q  330 tacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttc 429  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||    
T  12270653 tacctgattaaccactctttt-accattcaattctatggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaaattccccaatttc 12270555  T
Q  430 taccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaa 512  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||||    
T  12270554 taccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttaaatttgcagaa 12270472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 29 - 501
Target Start/End: Original strand, 19450805 - 19451277
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||| ||||  |||||||||||||||||||||  ||  ||||| | |||||||||||||    
T  19450805 gacatattgaaattacagatttt-ctgtcaaaatcgcctcacgatcactatcatcgcctcatgatttcgacagcttcctacatattgaaattacagattt 19450903  T
Q  129 ttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatggg 228  Q
    | ||||||||||||||||| ||| ||||  |||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||| ||||||||||    
T  19450904 t-ctgtcaaaatcgcctcacgatcactatcatcgcctcatgatttcgacagcttcctacatattgaaattacagatttttctacgattttctaccatggg 19451002  T
Q  229 agcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaac 328  Q
    ||||||||||||| || ||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  19451003 agcctccttggctccatttcttgaccctaaactctccaaaatcatccataatcatcaccatatgattaccctatcattaaaatgttaacccatcactaac 19451102  T
Q  329 ctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatccc-aagtttctcaatt 427  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||| |||||    
T  19451103 ctaccttattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaaattttcccaatt 19451202  T
Q  428 tctaccagaaacatgttaaat-caaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  19451203 tctaccagaaacatgttaaatccaaaattagaattacaatctatactattgaaagtaaacttcacccttacctta 19451277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 29 - 501
Target Start/End: Original strand, 19444239 - 19444711
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    |||||| | |||||||||||||| ||||||||||||| ||| ||| ||||  |||||||||||||||||||||  ||  ||||| | |||||||||||||    
T  19444239 gacatattgaaattacagatttt-ctgtcaaaatcgcatcacgatcactatcatcgcctcatgatttcgacagcttcctacatattgaaattacagattt 19444337  T
Q  129 ttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatggg 228  Q
    | ||||||||||||||||| ||| ||||  |||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||| ||||||||||    
T  19444338 t-ctgtcaaaatcgcctcacgatcactatcatcgcctcatgatttcgacagcttcctacatattgaaattacagatttttctacgattttctaccatggg 19444436  T
Q  229 agcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaac 328  Q
    ||||||||||||| || ||||  |||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  19444437 agcctccttggctccatttcttgaccctaaactctccaaaatcatccataatcatcaccataggattaccctatcattaaaacgttaacccatcactaac 19444536  T
Q  329 ctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatccc-aagtttctcaatt 427  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||| |||||    
T  19444537 ctacctaattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaaattttcccaatt 19444636  T
Q  428 tctaccagaaacatgttaaat-caaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  19444637 tctaccagaaacatgttaaatccaaaattagaattacaatctatactattgaaagtaaacatcacccttacctta 19444711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 107 - 501
Target Start/End: Complemental strand, 14647426 - 14647033
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | ||||||||| |||||||||||||||||||||||||||||||||||||    
T  14647426 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcagacatattgaaattacagatt 14647328  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    || ||||||||| ||||||||||||||||||||||| ||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  14647327 tt-ctgcgattttctaccatgggagcctccttggctccatctcttaaccctaaactctccaaaatcatccataatcatcaccatatgattaccctatcat 14647229  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  14647228 taaaacgttaatccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcatccaaaaatcaataatcaaaa 14647129  T
Q  406 cctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  14647128 cctaatcccaaatttcccaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 14647033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 179 - 500
Target Start/End: Complemental strand, 10989133 - 10988813
Alignment:
Q  179 gcatcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccata 278  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |  | || ||||||||||||||||||||||||||||    
T  10989133 gcatcagacatattgaaattacagattttt-tgcgattttctaccatgggagcctccttggctccgttacttaaccctaaactctccaaaatcatccata 10989035  T
Q  279 aacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacact 378  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10989034 atcatcaccatatgattaccctatcattaaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacact 10988935  T
Q  379 ttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaa 478  Q
    |||||||||||||| |||||||||||||||||||  || |||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |    
T  10988934 ttttcattcaaaaatcaataatcaaaacctaatcttaaatttcccaatttctaccagaaacatattaaatcaaaatcagaattataatctatactattga 10988835  T
Q  479 aagtaaatctcacccttacctt 500  Q
    ||||||| ||||||||||||||    
T  10988834 aagtaaacctcacccttacctt 10988813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 31 - 335
Target Start/End: Complemental strand, 8582816 - 8582514
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8582816 catactaaaattacagatttt-ctgtcaaaatcgcatcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 8582718  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||  |||||||||  | |||||||| | ||||||||||||| |||||||||||     
T  8582717 ctgtcaaaatcgcctcatgatccctagaatcgcctcatgatttcgacaatatcagacatcctaaaattacaca-ttttctgcgattttctaccatgggaa 8582619  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  8582618 cctccttggctccatctcttaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcattaaaacgttaacctatcactaacct 8582519  T
Q  331 acctg 335  Q
    |||||    
T  8582518 acctg 8582514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 127 - 416
Target Start/End: Complemental strand, 30123752 - 30123463
Alignment:
Q  127 ttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatg 226  Q
    ||||||||||||||||||||| ||| ||| | ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  30123752 ttttctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcagacatattgaaaatacagatttt-ctgcgattttctaccatg 30123654  T
Q  227 ggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcacta 326  Q
    |||||||| |||||| || |||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||| |||||  |||| |||||||||    
T  30123653 ggagcctcattggctccatttcttaaccctaaactctccaaaatcatccataatcatcaccatatgataacactatcattaaaaaattaaaccatcacta 30123554  T
Q  327 acctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaa-ccaataatcaaaacctaatcccaa 416  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  30123553 acctacctgattaaccactcttttcaccattcaattctacggtttctacactttttcattcaaaaattcaataatcaaaacttaatcccaa 30123463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 107 - 416
Target Start/End: Original strand, 11913450 - 11913759
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||||| | | | ||||||||| |||||||||||||||| | ||  ||| ||| ||||||    
T  11913450 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcatgatcattgggatcgcctcacgatttcgacagcatcatatatgctgatattgcagatt 11913548  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||||||||| ||||||||||||||||||||||| |  || |  ||||||||||||| |||||||||||||| ||||||||||||||||||||||||     
T  11913549 tttctgcgattttctaccatgggagcctccttggctccgttttttgaccctaaactctctaaaatcatccataatcatcaccatatgattaccctatcat 11913648  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    | ||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11913649 tgaaacgttaatccatcactaacctacccgattaaccactcttttcaccgttcaattctatggtttctacactttttcattcaaaaatcaataatcaaaa 11913748  T
Q  406 cctaatcccaa 416  Q
    |||||||||||    
T  11913749 cctaatcccaa 11913759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 80 - 370
Target Start/End: Complemental strand, 14479934 - 14479645
Alignment:
Q  80 aatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 179  Q
    |||||| ||||||||| ||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  14479934 aatcgcttcatgattttgacagcatcagacatactgaaattacagatttt-ctgtcaaaatcgcctcatgatcactggaattgcctcatgatttcgacag 14479836  T
Q  180 catcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataa 279  Q
    ||||||||||  |||| | ||||||||||||||||||| ||||||||||||||||||||||| |  |||| ||||||||||||||||||||| |||||||    
T  14479835 catcagacattctgaagtcacagatttttctgcgattttctaccatgggagcctccttggctccgtttcttaaccctaaactctccaaaatcgtccataa 14479736  T
Q  280 acatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
     |||||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||| || ||||||||| |||||||||||||||    
T  14479735 tcatcaccatatgattaccctatcattaaaacattaatccctcactaacctacctgattaacgacacttttcaccgttcaattctatggtt 14479645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 329 - 556
Target Start/End: Complemental strand, 8579416 - 8579193
Alignment:
Q  329 ctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaattt 428  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  8579416 ctacctgattaaccactctttccaccattcaattctatggtttctacacttcttcattcaaaa-ccaataatcaaaacctaatcccaaatttctcaattt 8579318  T
Q  429 ctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacact 528  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||| |||||     
T  8579317 ctaccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacggcacacg 8579221  T
Q  529 gttgatcttggctctacttgttcatctc 556  Q
    ||||||||||| ||||||||||| ||||    
T  8579220 gttgatcttggttctacttgttcttctc 8579193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 127 - 412
Target Start/End: Complemental strand, 51602903 - 51602617
Alignment:
Q  127 ttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatg 226  Q
    ||||||||||||||||||||| ||| ||| | |||||||||||||||||||||||||| ||||  ||| ||||||||||||||| |||||| ||||||||    
T  51602903 ttttctgtcaaaatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcatacatgctgatattacagatttttctacgattttctaccatg 51602804  T
Q  227 ggagcctccttggcttcaattctcaaccct-aaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcact 325  Q
    ||||||||||||||| |  || |  ||||| ||||||||||||||||||||||| | || ||||||||||||||||||| | ||||||||| || |||||    
T  51602803 ggagcctccttggctccgttttttgaccctaaaactctccaaaatcatccataatcctcgccatatgattaccctatcattgaaacgttaatccctcact 51602704  T
Q  326 aacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatc 412  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  51602703 aacctacccgattaaccactcttttcaccgttcaattctatggtttctacactttttcattcaaaagtcaataatcaaaacctaatc 51602617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 107 - 370
Target Start/End: Complemental strand, 31224276 - 31224014
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||| ||||  | |||| ||| ||||    
T  31224276 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacatgctaaaatcacatattt 31224178  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    ||||||||||| |||||||||||||||| |||||| |  ||||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |    
T  31224177 ttctgcgattttctaccatgggagcctcattggctccgtttcttgaccctaaactctccaaaatcgtccataatcatcaccatatgattaccctatcatt 31224078  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  31224077 aaaacgttaatccatcactaccctacctgattaaccactcttttcaccgttcaattctatggtt 31224014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 116 - 370
Target Start/End: Original strand, 13520021 - 13520274
Alignment:
Q  116 aaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgat 215  Q
    |||||||||||||| ||||| |||| |||||| ||| ||| | |||||||||||||||||||| ||||| ||||  |||||| |||||||||||||||||    
T  13520021 aaattacagatttt-ctgtccaaattgcctcacgatcactgggatcgcctcatgatttcgacatcatcatacatgctgaaatcacagatttttctgcgat 13520119  T
Q  216 ttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgtta 315  Q
    || |||||||||||||||||||||||    ||||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||| || |||||||    
T  13520120 tttctaccatgggagcctccttggctctgtttcttgaccctaaactctccaaaatcgtccataatcatcaccatatgattaccctatcattagaacgtta 13520219  T
Q  316 acccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    | ||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  13520220 atccatcactaacctacctaattaaccactcttttcaccgttcaattctttggtt 13520274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 31 - 211
Target Start/End: Original strand, 49400128 - 49400307
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  49400128 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattatagattttt 49400226  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctg 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  49400227 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctg 49400307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 158 - 370
Target Start/End: Complemental strand, 50755675 - 50755463
Alignment:
Q  158 aatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaacccta 257  Q
    ||||||||||||||||||||||||||| ||||  | |||| | ||||||||||||||||| ||||||||||||||||||||||| || ||||  ||||||    
T  50755675 aatcgcctcatgatttcgacagcatcatacatgctaaaatcatagatttttctgcgattttctaccatgggagcctccttggctccatttcttgacccta 50755576  T
Q  258 aactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccatt 357  Q
    |||||||||||||| || |||| |||||||||||||||||||||||| || ||| |||| ||||||||||||||||||||||||||||||||||||| ||    
T  50755575 aactctccaaaatcgtcaataatcatcaccatatgattaccctatcattagaacattaatccatcactaacctacctgattaaccactcttttcaccgtt 50755476  T
Q  358 caattctatggtt 370  Q
    |||||||||||||    
T  50755475 caattctatggtt 50755463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 21618831 - 21618997
Alignment:
Q  19 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaa 118  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||||    
T  21618831 gacagtatcagacacactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcttcatgatttcgacagcatcatacatactaaaa 21618930  T
Q  119 ttacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
    ||||||  ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  21618931 ttacag-gttttctgtcgaaatcgcctcatgagcactagaatcgcctcatgatttcgacagcatcaga 21618997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 36166980 - 36167146
Alignment:
Q  19 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaa 118  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||||    
T  36166980 gacagtatcagacacactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcttcatgatttcgacagcatcatacatactaaaa 36167079  T
Q  119 ttacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
    ||||||  |||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36167080 ttacag-gttttctatcgaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcaga 36167146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 14085233 - 14085361
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14085233 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 14085332  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| || |||| |||||||||    
T  14085333 gtatcagacatgctgaaatcacagatttt 14085361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 14090634 - 14090762
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14090634 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 14090733  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| || |||| |||||||||    
T  14090734 gtatcagacatgctgaaatcacagatttt 14090762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 24122678 - 24122550
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  24122678 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgactcatgatttcgaca 24122579  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| ||||||||||| |||||    
T  24122578 gtatcagacatcctaaaattacacatttt 24122550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 8582769 - 8582641
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  8582769 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatccctagaatcgcctcatgatttcgaca 8582670  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
     |||| ||||| ||||||||||| |||||    
T  8582669 atatcagacatcctaaaattacacatttt 8582641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 12270902 - 12270775
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| |  |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  12270902 gaatcgcctcatgatttcgacagcatcagacatactaaaattacaca-atttctgtcaaaatcgcctcatgatcactagaattgcctcatgatttcgaca 12270804  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| |||||| |||||||||| |||||    
T  12270803 gtatcagacatattaaaattacacatttt 12270775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 21618831 - 21618941
Alignment:
Q  97 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaa 196  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| | |||    
T  21618831 gacagtatcagacacactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcttcatgatttcgacagcatcatacatactaaaa 21618930  T
Q  197 ttacagatttt 207  Q
    |||||| ||||    
T  21618931 ttacaggtttt 21618941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 36166980 - 36167090
Alignment:
Q  97 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaa 196  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| | |||    
T  36166980 gacagtatcagacacactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcttcatgatttcgacagcatcatacatactaaaa 36167079  T
Q  197 ttacagatttt 207  Q
    |||||| ||||    
T  36167080 ttacaggtttt 36167090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 14479934 - 14479804
Alignment:
Q  2 aatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    |||||| ||||||||| ||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  14479934 aatcgcttcatgattttgacagcatcagacatactgaaattacagatttt-ctgtcaaaatcgcctcatgatcactggaattgcctcatgatttcgacag 14479836  T
Q  102 tatctgacatactaaaattacagatttttctg 133  Q
     ||| ||||| || || | |||||||||||||    
T  14479835 catcagacattctgaagtcacagatttttctg 14479804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21618891 - 21618990
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||| ||||||||||||||| |||  |||||||||||||||||  ||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  21618891 gaatcgcttcatgatttcgacagcatcatacatactaaaattacag-gttttctgtcgaaatcgcctcatgagcactagaatcgcctcatgatttcgaca 21618989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36167040 - 36167139
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||| ||||||||||||||| |||  |||||||||||||||||  |||||| || ||||||||||||||| ||||||||||||||||||||||||||    
T  36167040 gaatcgcttcatgatttcgacagcatcatacatactaaaattacag-gttttctatcgaaatcgcctcatgatcactagaatcgcctcatgatttcgaca 36167138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 14288258 - 14288180
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||| |||||||||||||||    
T  14288258 caatttcttccagaaacatgttaaaccaaaatcagaattacaatctatactattgagagtaaacctcacccttacctta 14288180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 19444290 - 19444418
Alignment:
Q  3 atcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagt 102  Q
    |||||||||||||||||||||  ||  ||||| | |||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||||||||||     
T  19444290 atcgcctcatgatttcgacagcttcctacatattgaaattacaga-ttttctgtcaaaatcgcctcacgatcactatcatcgcctcatgatttcgacagc 19444388  T
Q  103 atctgacatactaaaattacagatttttct 132  Q
     ||  ||||| | |||||||||||||||||    
T  19444389 ttcctacatattgaaattacagatttttct 19444418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 19450856 - 19450984
Alignment:
Q  3 atcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagt 102  Q
    |||||||||||||||||||||  ||  ||||| | |||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||||||||||     
T  19450856 atcgcctcatgatttcgacagcttcctacatattgaaattacaga-ttttctgtcaaaatcgcctcacgatcactatcatcgcctcatgatttcgacagc 19450954  T
Q  103 atctgacatactaaaattacagatttttct 132  Q
     ||  ||||| | |||||||||||||||||    
T  19450955 ttcctacatattgaaattacagatttttct 19450984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 431 - 501
Target Start/End: Original strand, 35985649 - 35985719
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  35985649 accagaactatgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 35985719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 31224276 - 31224173
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| ||||||||||| |||  |||| ||||||| ||| ||||    
T  31224276 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacatgctaaaatcacatattt 31224178  T
Q  129 ttctg 133  Q
    |||||    
T  31224177 ttctg 31224173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 10550841 - 10550919
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||| |||| ||||||||||| |||||||||||||||||    
T  10550841 gacatactaaaattacagatttt-ctgtcgaaaccgcctcatgatcactaaaatcgcctcataatttcgacagcatcaga 10550919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 426 - 502
Target Start/End: Original strand, 13054865 - 13054941
Alignment:
Q  426 tttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||| ||||||||||| ||||||||||||||  ||||| |||||| |||||||| ||||||||||||||||    
T  13054865 tttctaccaggaacatgttaaaccaaaatcagaattatgatctagactattgaaagtaaacctcacccttaccttag 13054941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 14647426 - 14647326
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | ||||||||| ||||||||||| ||| |||||| | ||||||||||||    
T  14647426 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcagacatattgaaattacagatt 14647328  T
Q  128 tt 129  Q
    ||    
T  14647327 tt 14647326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 10550841 - 10550912
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||| |||| ||||||||||| ||||||||||    
T  10550841 gacatactaaaattacagatttt-ctgtcgaaaccgcctcatgatcactaaaatcgcctcataatttcgacag 10550912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 51602903 - 51602820
Alignment:
Q  49 ttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttct 132  Q
    ||||||||||||||||||||| ||| ||| | ||||||||||||||||||||| |||  |||| || | |||||||||||||||    
T  51602903 ttttctgtcaaaatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcatacatgctgatattacagatttttct 51602820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 431 - 501
Target Start/End: Original strand, 42110153 - 42110223
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  |||||||| ||||||||||||||||||||| |||||| |||| ||| |||||||||||||||    
T  42110153 accagaactatgttaaaacaaaatcagaattacaatctacactattgaaagcaaacctcacccttacctta 42110223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 486 - 556
Target Start/End: Complemental strand, 17240528 - 17240461
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttcatctc 556  Q
    |||||||||||||||| ||   |||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  17240528 tctcacccttaccttaatt---cagaaaatcgcacgacacacggttgatattggctctacttgttcttctc 17240461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 30123752 - 30123672
Alignment:
Q  49 ttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttt 129  Q
    ||||||||||||||||||||| ||| ||| | ||||||||| ||||||||||| ||| |||||| | ||| ||||||||||    
T  30123752 ttttctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcagacatattgaaaatacagatttt 30123672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 42439 - 42490
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  42439 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 42490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 5224234 - 5224285
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  5224234 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 5224285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 15466006 - 15466057
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  15466006 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 15466057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 513
Target Start/End: Complemental strand, 31689837 - 31689771
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||| ||||||||||| ||||||||||||| |||||||| |||||||||||| ||| ||||||||||    
T  31689837 aatcagaatcagaatta-aatctatactattgaaagtaaacctcacccttaccctagatttgcagaaa 31689771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 366 - 416
Target Start/End: Original strand, 13437151 - 13437201
Alignment:
Q  366 tggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  13437151 tggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 13437201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 452 - 513
Target Start/End: Original strand, 31944395 - 31944455
Alignment:
Q  452 aatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||||||| ||||||||||||| ||| |||| |||||||||||||||| ||||||||||    
T  31944395 aatcagaatta-aatctatactattgaaattaaacctcacccttaccttagatttgcagaaa 31944455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 10833446 - 10833395
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| ||||||| |||||||||||||||    
T  10833446 atggtttctacacttttcaattcaaaaatcaataatgaaaacctaatcccaa 10833395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 133
Target Start/End: Original strand, 13520021 - 13520115
Alignment:
Q  38 aaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctg 133  Q
    |||||||||||||| ||||| |||| |||||| ||| ||| | ||||||||||||||||||||  |||  |||| || |||| |||||||||||||    
T  13520021 aaattacagatttt-ctgtccaaattgcctcacgatcactgggatcgcctcatgatttcgacatcatcatacatgctgaaatcacagatttttctg 13520115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 16324681 - 16324630
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||||||||||||||   ||||||||| |||||||||||||||||||||||    
T  16324681 atggtttctacactttccaattcaaaaatcaataatcaaaacctaatcccaa 16324630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 43549796 - 43549745
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||| ||||| |||||||||||||||||||||||    
T  43549796 atggtttctacacttttcaatttaaaaatcaataatcaaaacctaatcccaa 43549745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 514
Target Start/End: Complemental strand, 12355237 - 12355168
Alignment:
Q  445 aaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||||||||||||||   ||||| |||||| || ||||| ||||||||||||||||||||||||||||    
T  12355237 aaatcaaaatcagaattaagtatctacactattgaa-gtaaacctcacccttaccttagttttgcagaaaa 12355168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 514
Target Start/End: Complemental strand, 18127775 - 18127706
Alignment:
Q  445 aaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||||||||||||||   ||||| |||||| || ||||| ||||||||||||||||||||||||||||    
T  18127775 aaatcaaaatcagaattaatcatctacactattgaa-gtaaacctcacccttaccttagttttgcagaaaa 18127706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 514
Target Start/End: Complemental strand, 18135545 - 18135476
Alignment:
Q  445 aaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||||||||||||||   ||||| |||||| || ||||| ||||||||||||||||||||||||||||    
T  18135545 aaatcaaaatcagaattaatcatctacactattgaa-gtaaacctcacccttaccttagttttgcagaaaa 18135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 11913450 - 11913522
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||||| | | | ||||||||| |||||||||||    
T  11913450 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcatgatcattgggatcgcctcacgatttcgacag 11913522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 513
Target Start/End: Complemental strand, 11964143 - 11964075
Alignment:
Q  445 aaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||||||||||||| | |||||| || ||| || ||||| |||||||||||||||||||||||||||    
T  11964143 aaatcaaaatcagaattcagaatctacacaattgaa-gtaaacctcacccttaccttagttttgcagaaa 11964075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 365 - 410
Target Start/End: Complemental strand, 17547612 - 17547567
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaa 410  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||    
T  17547612 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaa 17547567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 37917025 - 37916969
Alignment:
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagac 187  Q
    ||||||||||||||||||||||  |  |||||| |||||||||||||| ||||||||    
T  37917025 ctgtcaaaatcgcctcatgattcgtgaaatcgcttcatgatttcgacaacatcagac 37916969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 15934174 - 15934096
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||||||||||||||||| |  |||||||||| |  ||| ||| |||||||||||||||    
T  15934174 caatttctaccataaacttgttaaatcaaaatcagaattcaacatctatactact-gaagcaaacctcacccttacctta 15934096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 15954179 - 15954101
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||||||||||||||||| |  |||||||||| |  ||| ||| |||||||||||||||    
T  15954179 caatttctaccataaacttgttaaatcaaaatcagaattcaacatctatactact-gaagcaaacctcacccttacctta 15954101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 26054575 - 26054528
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatc 412  Q
    |||||||||||| ||||  ||||||||| |||||||||||||||||||    
T  26054575 atggtttctacaattttcaattcaaaaatcaataatcaaaacctaatc 26054528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 514
Target Start/End: Complemental strand, 12478911 - 12478842
Alignment:
Q  445 aaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||||||||||||||   ||||| |||||| || ||||| ||||||| ||||||||||||||||||||    
T  12478911 aaatcaaaatcagaattaagtatctacactattgaa-gtaaacctcacccgtaccttagttttgcagaaaa 12478842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 513
Target Start/End: Complemental strand, 13967817 - 13967787
Alignment:
Q  483 aaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||||||||||||||||||    
T  13967817 aaatctcacccttaccttagttttgcagaaa 13967787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 513
Target Start/End: Complemental strand, 13973292 - 13973262
Alignment:
Q  483 aaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||||||||||||||||||    
T  13973292 aaatctcacccttaccttagttttgcagaaa 13973262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 514
Target Start/End: Complemental strand, 13202735 - 13202702
Alignment:
Q  481 gtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||| ||||||||||||||||||||||||||||    
T  13202735 gtaaacctcacccttaccttagttttgcagaaaa 13202702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 14543557 - 14543481
Alignment:
Q  436 aaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaa 512  Q
    |||| ||||||||| ||||||||||| | ||||||||  |||  || |||| ||||||||||||||||||||||||||    
T  14543557 aaacctgttaaatccaaatcagaattcagaatctatatgattgcaa-taaacctcacccttaccttagttttgcagaa 14543481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 460
Target Start/End: Complemental strand, 16823027 - 16822990
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaat 460  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  16823027 caatttctaccataaacctgttaaatcaaaatcagaat 16822990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 50755675 - 50755622
Alignment:
Q  80 aatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctg 133  Q
    |||||||||||||||||||||| |||  |||| ||||||| | |||||||||||    
T  50755675 aatcgcctcatgatttcgacagcatcatacatgctaaaatcatagatttttctg 50755622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 50755675 - 50755622
Alignment:
Q  2 aatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctg 55  Q
    |||||||||||||||||||||| |||  |||| ||||||| | |||||||||||    
T  50755675 aatcgcctcatgatttcgacagcatcatacatgctaaaatcatagatttttctg 50755622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 515
Target Start/End: Complemental strand, 54090978 - 54090898
Alignment:
Q  436 aaacatgttaaa-tcaaaatcagaa-ttacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaat 515  Q
    |||| ||||||| |||||||||||| ||| ||||||||||| | || ||||| ||||||||||||||||  |||||||||||    
T  54090978 aaacctgttaaactcaaaatcagaaattaaaatctatactactgaa-gtaaacctcacccttaccttagaattgcagaaaat 54090898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 450 - 513
Target Start/End: Complemental strand, 12960599 - 12960536
Alignment:
Q  450 aaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||| | ||||||||||| | || | ||| |||||||||||||||||||||||||||    
T  12960599 aaaatcagaattcagaatctatactaatgaa-gcaaacctcacccttaccttagttttgcagaaa 12960536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 14647374 - 14647326
Alignment:
Q  3 atcgcctcatgatttcgacagtatctgacatactaaaattacagatttt 51  Q
    ||||||||| ||||||||||| ||| |||||| | ||||||||||||||    
T  14647374 atcgcctcacgatttcgacagcatcagacatattgaaattacagatttt 14647326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 207
Target Start/End: Original strand, 19444233 - 19444261
Alignment:
Q  179 gcatcagacatattgaaattacagatttt 207  Q
    |||||||||||||||||||||||||||||    
T  19444233 gcatcagacatattgaaattacagatttt 19444261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 413; Significance: 0; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 1 - 513
Target Start/End: Complemental strand, 1856980 - 1856470
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1856980 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 1856881  T
Q  101 gtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattac 200  Q
    ||||| ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||  | |||||||    
T  1856880 gtatcagacatgctgaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagtatcatacatcctaaaattac 1856781  T
Q  201 agatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccct 300  Q
    | ||||| ||||||||| ||||||||||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1856780 acatttt-ctgcgattttctaccatgggaacctccttggctccatctctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccct 1856682  T
Q  301 atcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataat 400  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1856681 atcattaaaacgttaacccatcactaacctacctgattaaccactctttccaccattcaattctatggtttctacactttttcattc-aaaaccaataat 1856583  T
Q  401 caaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctt 500  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1856582 caaaacctaatcccaaatttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttacctt 1856483  T
Q  501 agttttgcagaaa 513  Q
    |||||||||||||    
T  1856482 agttttgcagaaa 1856470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 513
Target Start/End: Complemental strand, 21674948 - 21674440
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||    
T  21674948 gaatcgcctcatgatctcgacagtatcagacatactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgaca 21674850  T
Q  101 gtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattac 200  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||  | |||||||    
T  21674849 gtatcagacatactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatcctaaaattac 21674751  T
Q  201 agatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccct 300  Q
    | ||||| ||||||||| ||||||||||| ||||||||||| ||  |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21674750 acatttt-ctgcgattttctaccatgggaacctccttggctccatctctttaccctaaactctccaaaatcatccataaacatcaccatatgattaccct 21674652  T
Q  301 atcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataat 400  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21674651 atcattaaaacgttaacccatcactaacctacctgattaaccactctttccaccattcaattctatggtttctacactttttcattc-aaaaccaataat 21674553  T
Q  401 caaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctt 500  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21674552 caaaacctaatcccaaatttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttacctt 21674453  T
Q  501 agttttgcagaaa 513  Q
    |||||||||||||    
T  21674452 agttttgcagaaa 21674440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 29 - 501
Target Start/End: Complemental strand, 43242981 - 43242511
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | ||||||||| ||||||||||  ||| |||||| | ||||||||||||    
T  43242981 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacaacatcagacatattgaaattacagatt 43242883  T
Q  128 tttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgg 227  Q
    || ||||||||||||| ||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  43242882 tt-ctgtcaaaatcgcatcacgatcactgggatcgcctcatgatttcgacagcatcagacatattgaaattacagatttt-ctgcgattttctaccatgg 43242785  T
Q  228 gagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaa 327  Q
    |||||||||||||| |  |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  43242784 gagcctccttggctccgtttcttaaccctaaactctccaaaatcatccataatcatcaccatatgattactctatcattaaaacgttaacccatcactaa 43242685  T
Q  328 cctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatt 427  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||    
T  43242684 cctacctgattaaccactctttccaccattcaattatatggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaaatttcccaatt 43242585  T
Q  428 tctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  43242584 tctaccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 43242511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 107 - 502
Target Start/End: Complemental strand, 22758213 - 22757817
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | ||||||||| ||||||||| |||||| ||||  ||| ||||||||||    
T  22758213 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgactgcatcatacatgctgatattacagatt 22758115  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||||||||| ||||||||||| ||||||||||| ||  ||| |||||| |||||||||||||||||||||| ||||||| ||||||||||||||||     
T  22758114 tttctgcgattttctaccatgggaacctccttggctccatctcttaaccctcaactctccaaaatcatccataatcatcaccctatgattaccctatcat 22758015  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattca-aaaaccaataatcaaa 404  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  22758014 taaaacgttaacccatcactaacttacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaatcaataatcaaa 22757915  T
Q  405 acctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  22757914 acctaatcccaaatttttcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttag 22757817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 107 - 416
Target Start/End: Original strand, 36460699 - 36461007
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | ||||||||| ||||| |||||||||| ||||  ||| ||||||||||    
T  36460699 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacgattttgacagcatcatacatgctgatattacagatt 36460797  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||||||||| |||||||||||||||||||| || |  || | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  36460798 tttctgcgattttctaccatgggagcctccttgactccgttttttaaccctaaactctccaaaatcatccataatcatcaccatatgattaccctatcat 36460897  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    | ||||||||| |||||||||||||||| |||||||||||||||||||| ||| ||| |||||||||||||| |||||||||||||  ||||||||||||    
T  36460898 tgaaacgttaatccatcactaacctacccgattaaccactcttttcaccgttccattatatggtttctacac-ttttcattcaaaagtcaataatcaaaa 36460996  T
Q  406 cctaatcccaa 416  Q
    |||||||||||    
T  36460997 cctaatcccaa 36461007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 107 - 370
Target Start/End: Complemental strand, 21557367 - 21557105
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||| ||||  |||||| ||||||||    
T  21557367 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacatgctgaaatcacagattt 21557269  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    ||||||||||| ||||||||||||||||||||||| |  ||||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |    
T  21557268 ttctgcgattttctaccatgggagcctccttggctccgtttcttgaccctaaactctccaaaatcgtccataatcatcaccatatgattaccctatcatt 21557169  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    ||||||| || ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  21557168 aaaacgtcaatccatcactaccctacctgattaaacactcttttcaccgttcaattctatggtt 21557105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 80 - 370
Target Start/End: Complemental strand, 24830348 - 24830059
Alignment:
Q  80 aatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 179  Q
    |||||| ||||||||| ||||| ||| |||||||| |||||| ||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  24830348 aatcgcttcatgattttgacagcatcagacatactgaaattatagatttt-ctgtccaaatcgcctcatgatcactagaatcgcctcatgatttcgacag 24830250  T
Q  180 catcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataa 279  Q
    ||||||||||  |||||| | |||||||||||| |||| ||||||||||||||||||||||| |  ||||  |||||||| ||||||||||| |||||||    
T  24830249 catcagacatgctgaaatcatagatttttctgcaattttctaccatgggagcctccttggctccgtttcttgaccctaaaatctccaaaatcgtccataa 24830150  T
Q  280 acatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
     |||||||||||||||||||||||| || ||| |||| || |||||||||||||||||||||||||||||||| | ||||||| |||||||    
T  24830149 tcatcaccatatgattaccctatcattagaacattaatccctcactaacctacctgattaaccactcttttcaacgttcaattatatggtt 24830059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 1857027 - 1856848
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1857027 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 1856929  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctg 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  1856928 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaattacagatttttctg 1856848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 158 - 370
Target Start/End: Complemental strand, 21554672 - 21554460
Alignment:
Q  158 aatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaacccta 257  Q
    |||||||||| |||||||||||||||| ||||  |||||| ||||||||||||||||||| |||||||||||||||||||||||    ||||  || |||    
T  21554672 aatcgcctcacgatttcgacagcatcatacatgctgaaatcacagatttttctgcgattttctaccatgggagcctccttggctctgtttcttgactcta 21554573  T
Q  258 aactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccatt 357  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||    
T  21554572 aactctccaaaatcgtccataatcatcaccatatgattaccctatcattaaaacgttaatccatcactaccctacctgattaaccactcttttcaccttt 21554473  T
Q  358 caattctatggtt 370  Q
    |||||||||||||    
T  21554472 caattctatggtt 21554460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 18318795 - 18318639
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||    
T  18318795 gacatactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcagacatactaaaattacaga-tt 18318697  T
Q  129 ttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  18318696 ttctgtcgaaatcgcctcatgatcactagaatcacctcatgatttcgacagcatcaga 18318639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 21674995 - 21674821
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| | ||||    
T  21674995 catactaaaattacagatttt-ctgtcaaaatcgcctcatgatcactagaatcgcctcatgatctcgacagtatcagacatactaaaattacaca-tttt 21674898  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttt 207  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| | |||||||| |||||    
T  21674897 ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacacatttt 21674821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 20765854 - 20765688
Alignment:
Q  19 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaa 118  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||  |||||||||||    
T  20765854 gacagcatcagacatactaaaattacagatttttctgtcaaaatcgcatcatgatcactagaatcgcctcatgatttcgacagcatcaaacatactaaaa 20765755  T
Q  119 ttacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  20765754 ttacaga-ttttctgtcgaaatcgcctcatgatcactagaatcgcctcataatttcgacagcatcaga 20765688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 18318795 - 18318695
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  18318795 gacatactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcagacatactaaaattacagattt 18318696  T
Q  207 t 207  Q
    |    
T  18318695 t 18318695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 20765854 - 20765744
Alignment:
Q  97 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaa 196  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||| | |||    
T  20765854 gacagcatcagacatactaaaattacagatttttctgtcaaaatcgcatcatgatcactagaatcgcctcatgatttcgacagcatcaaacatactaaaa 20765755  T
Q  197 ttacagatttt 207  Q
    |||||||||||    
T  20765754 ttacagatttt 20765744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18318745 - 18318646
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  18318745 gaatcgcctcatgatttcgacagcatcagacatactaaaattacaga-ttttctgtcgaaatcgcctcatgatcactagaatcacctcatgatttcgaca 18318647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20765794 - 20765695
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  20765794 gaatcgcctcatgatttcgacagcatcaaacatactaaaattacaga-ttttctgtcgaaatcgcctcatgatcactagaatcgcctcataatttcgaca 20765696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 24830348 - 24830218
Alignment:
Q  2 aatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    |||||| ||||||||| ||||| ||| |||||||| |||||| ||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  24830348 aatcgcttcatgattttgacagcatcagacatactgaaattatagatttt-ctgtccaaatcgcctcatgatcactagaatcgcctcatgatttcgacag 24830250  T
Q  102 tatctgacatactaaaattacagatttttctg 133  Q
     ||| ||||| || |||| | |||||||||||    
T  24830249 catcagacatgctgaaatcatagatttttctg 24830218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 43242929 - 43242804
Alignment:
Q  3 atcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagt 102  Q
    ||||||||| ||||||||||  ||| |||||| | |||||||||| ||||||||||||||||| ||| ||| ||| | |||||||||||||||||||||     
T  43242929 atcgcctcacgatttcgacaacatcagacatattgaaattacaga-ttttctgtcaaaatcgcatcacgatcactgggatcgcctcatgatttcgacagc 43242831  T
Q  103 atctgacatactaaaattacagatttt 129  Q
    ||| |||||| | ||||||||||||||    
T  43242830 atcagacatattgaaattacagatttt 43242804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 21495825 - 21495903
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| ||||  |||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  21495825 caatttctaccataaaccggttaaaccaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 21495903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 21557367 - 21557264
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| ||||||||||| |||  |||| || |||| ||||||||    
T  21557367 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacatgctgaaatcacagattt 21557269  T
Q  129 ttctg 133  Q
    |||||    
T  21557268 ttctg 21557264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 10036074 - 10036154
Alignment:
Q  421 ctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||||||| | || | |||||||| |||||||||||||||    
T  10036074 ctcaatttctaccataaacctgttaaaccaaaatcagaattacaatctacattactgaaagtaaacctcacccttacctta 10036154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 387 - 501
Target Start/End: Original strand, 18819804 - 18819916
Alignment:
Q  387 caaaaaccaat-aatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaa 485  Q
    ||||||||||| |||||||| |||| ||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||||| || |||  ||| |||    
T  18819804 caaaaaccaatgaatcaaaatctaa-cccaa-tttcccaatttctaccagaaacatgttaaaccaaattcagaattacaatctacaccatt-gaagcaaa 18819900  T
Q  486 tctcacccttacctta 501  Q
     |||||||||||||||    
T  18819901 cctcacccttacctta 18819916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 445 - 513
Target Start/End: Original strand, 19077459 - 19077526
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||||| ||||||||||||| | ||||||  |||||||||||||| |||||||||||    
T  19077459 aaatcaaaatcagaattataatctatactattgagagtaaa-atcacccttaccttaattttgcagaaa 19077526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 18419363 - 18419414
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  18419363 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 18419414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 22006902 - 22006836
Alignment:
Q  487 ctcacccttaccttagttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttcatctc 556  Q
    ||||||||||||||| ||   ||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  22006902 ctcacccttaccttaatt---cagaaaatcgcacgacacacgtttgatcttggctctacttgttcttctc 22006836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 27868715 - 27868664
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  27868715 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 27868664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 33472704 - 33472653
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  33472704 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 33472653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 462
Target Start/End: Complemental strand, 21980206 - 21980109
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttctaccagaa--acatgttaaatcaaaatcagaatta 462  Q
    |||||||||||||||||| |||||||||  || |||||||||||||||||||  ||| ||| ||  |||||||   | ||||||||||||||||||||||    
T  21980206 atggtttctacactttttaattcaaaaataaaaaatcaaaacctaatcccaa--ttcccaaatttaaccagaaccccttgttaaatcaaaatcagaatta 21980109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 22758213 - 22758109
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | ||||||||| ||||||||| | |||  |||| || | ||||||||||    
T  22758213 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgactgcatcatacatgctgatattacagatt 22758115  T
Q  128 tttctg 133  Q
    ||||||    
T  22758114 tttctg 22758109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 36460699 - 36460803
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | ||||||||| ||||| ||||| |||  |||| || | ||||||||||    
T  36460699 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacgattttgacagcatcatacatgctgatattacagatt 36460797  T
Q  128 tttctg 133  Q
    ||||||    
T  36460798 tttctg 36460803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 380
Target Start/End: Original strand, 19077363 - 19077399
Alignment:
Q  344 ctcttttcaccattcaattctatggtttctacacttt 380  Q
    |||||||||||||||||||||||||||||||||||||    
T  19077363 ctcttttcaccattcaattctatggtttctacacttt 19077399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 551
Target Start/End: Complemental strand, 18407959 - 18407897
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttc 551  Q
    |||||||||||||||| ||   ||||||||||||| |||||| | |||||||||||||||||||||    
T  18407959 tctcacccttaccttaatt---cagaaaatcgcacaacacacggatgatcttggctctacttgttc 18407897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 26754464 - 26754518
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  26754464 aatcagaatcagaatt-caatctatactattgaaagtaaacctcacccttacctta 26754518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 440 - 501
Target Start/End: Complemental strand, 21901060 - 21900999
Alignment:
Q  440 atgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||||| |||| || |||| | |||| |||||||| |||||||||||||||    
T  21901060 atgttaaatcaaaatcaaaatttcattctacattattgaaagtaaacctcacccttacctta 21900999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 21553528 - 21553477
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||| |||||||||||| |||||    
T  21553528 atggtttctacacttttcaattcaaaaatcaatgatcaaaacctaaacccaa 21553477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 21889516 - 21889594
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||| ||||||||||||| | |||||| |||| |  ||||||| |||||||||||||||    
T  21889516 caatttctaccataaacctgttaaaccaaaatcagaattaaaaatctacactact-gaagtaaacctcacccttacctta 21889594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24830272 - 24830218
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctg 55  Q
    ||||||||||||||||||||||| ||| ||||| || |||| | |||||||||||    
T  24830272 gaatcgcctcatgatttcgacagcatcagacatgctgaaatcatagatttttctg 24830218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 21554702 - 21554658
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgatt 74  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||    
T  21554702 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatt 21554658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 20765854 - 20765818
Alignment:
Q  175 gacagcatcagacatattgaaattacagatttttctg 211  Q
    |||||||||||||||| | ||||||||||||||||||    
T  20765854 gacagcatcagacatactaaaattacagatttttctg 20765818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 21554702 - 21554663
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctca 147  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  21554702 gacatactgaaattacagatttt-ctgtcaaaatcgcctca 21554663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 513
Target Start/End: Complemental strand, 22499738 - 22499706
Alignment:
Q  481 gtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||| |||||||||||||||||||||||||||    
T  22499738 gtaaacctcacccttaccttagttttgcagaaa 22499706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 408; Significance: 0; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Complemental strand, 46501 - 45981
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  46501 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtattagacatactaaaattacagattttt 46403  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  | |||||||| ||||| ||||||||| |||||||||||     
T  46402 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatcctaaaattacacatttt-ctgcgattttctaccatgggaa 46304  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  46303 cctccttggctccaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaacccatcactaacct 46204  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46203 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttct 46104  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  46103 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 46007  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  46006 tgatcttggttctacttgttcttctc 45981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Complemental strand, 51905 - 51385
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  51905 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcaccagaatcgcctcatgatttcgacagtatcaggcatactaaaattacagattttt 51807  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  | |||||||| ||||| ||||||||| |||||||||||     
T  51806 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatcctaaaattacacatttt-ctgcgattttctaccatgggaa 51708  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  51707 cctccttggctccaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaacccatcactaacct 51608  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  51607 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaaatttctcaatttct 51508  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  51507 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 51411  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  51410 tgatcttggttctacttgttcttctc 51385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 46454 - 46326
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46454 gaatcgcctcatgatttcgacagtattagacatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 46355  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| ||||||||||| |||||    
T  46354 gtatcagacatcctaaaattacacatttt 46326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 51858 - 51730
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  51858 gaatcgcctcatgatttcgacagtatcaggcatactaaaattacagatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 51759  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| ||||||||||| |||||    
T  51758 gtatcagacatcctaaaattacacatttt 51730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 431 - 501
Target Start/End: Complemental strand, 91810 - 91740
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  ||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  91810 accagaactatgttaaacgaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 91740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 408; Significance: 0; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 31 - 556
Target Start/End: Original strand, 23825795 - 23826315
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23825795 catactaaaattacacatttt-ctgtcaaaatcgcctcaggatcaccagaatcgcctcatgatttcgacagtatcagacatactaaaattacagattttt 23825893  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||  |||||| ||||||||| ||||||||| ||||||||||||    
T  23825894 ctgtcaaaattgcctcatgatcactagaatcgcctcatgatttcgacagtatcagacatgctgaaatcacagatttt-ctgcgattttctaccatgggag 23825992  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  23825993 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccgtatgattaccctatcattaaaacgttaactcatcactaacct 23826092  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttct 430  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  23826093 acctgattaacaactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcctaaatttctcaatttct 23826192  T
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaatcgcacgacacactgt 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  23826193 accagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagtt---cagaaaatcgcacgacacacggt 23826289  T
Q  531 tgatcttggctctacttgttcatctc 556  Q
    ||||||||| ||||||||||| ||||    
T  23826290 tgatcttggttctacttgttcttctc 23826315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 31 - 512
Target Start/End: Original strand, 3698257 - 3698737
Alignment:
Q  31 catactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattttt 130  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  3698257 catactaaaattacacatttt-ctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagtatcagacatactaaaattacacattttt 3698355  T
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||  |||||||||| ||||| ||||||||| ||||||| |||     
T  3698356 ctgtcaaaatcgcctcatgatttctagaatcgcctcatgattttgacagtatcagacatgctgaaattacacatttt-ctgcgattttctaccattggaa 3698454  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
    ||||||||||| ||  ||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  3698455 cctccttggctccatctcttaaccctaaactctccaaaatcatccataatcattaccatatgattaccctatcattaaaacgttaacccatcactaacct 3698554  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattc-aaaaaccaataatcaaaacctaatcccaagtttctcaatttc 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||   ||||||     
T  3698555 acctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaatcaataatcaaaacctaatcccaaattctccaattta 3698654  T
Q  430 taccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaa 512  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||||    
T  3698655 taccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttaaatttgcagaa 3698737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 107 - 502
Target Start/End: Original strand, 44432591 - 44432985
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||| ||| | |||||||||||||||||||||||||||||||  |||||| ||| ||||    
T  44432591 gacatattgaaattacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcagacatgctgaaatcacatattt 44432689  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    ||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |    
T  44432690 ttctgcgattttctaccatgggagcctccttggctccatttcttaaccctaaactctccaaaatcatccataatcatcaccatatgattacactatcatt 44432789  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaac 406  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  44432790 aaaacgttaacccatcactaacttacttgattaaccactcttttcaccattcaattctatggtttctatactttttcattcaaaaatcaataatcaaaac 44432889  T
Q  407 ctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  44432890 ctaatctcaaatttcccaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaaactcacccttaccttag 44432985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 107 - 416
Target Start/End: Original strand, 364517 - 364827
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| |||||||||||||||||||||| |||| ||| ||| | |||||||||  ||||||||||||||| ||||| ||| ||||||||||    
T  364517 gacatactgaaatttacagatttttctgtcaaaatcgtctcacgatcactgggatcgcctcacaatttcgacagcatcatacatactgatattacagatt 364616  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||| ||||| |||||||||||||||| |||||| || |||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||     
T  364617 tttctgtgattttctaccatgggagcctctttggctccatttcttaaccctaaactctccaaaatcatccataatcatcacgatatgattaccctatcat 364716  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  364717 taaaacgttaatccatcactaacctacctgattaaccactcttttcaccgttcaattctatggtttctacactttttcattcaaaaatcaataatcaaaa 364816  T
Q  406 cctaatcccaa 416  Q
    |||||||||||    
T  364817 cctaatcccaa 364827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 127 - 416
Target Start/End: Complemental strand, 42559831 - 42559543
Alignment:
Q  127 ttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatg 226  Q
    ||||| ||||||||||||||| ||| ||| | ||||||||| |||||||||||||||| ||||  ||| ||||||||||||||||||||||| |||||||    
T  42559831 ttttcagtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcatacatgctgatattacagatttttctgcgatttc-taccatg 42559733  T
Q  227 ggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcacta 326  Q
    ||||||||||||||| |  || |  |||||||||||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||| |||||||||    
T  42559732 ggagcctccttggctccgttttttgaccctaaactctccaaaatcatccataatcatcaccatacgattaccctatcattgaaacgttaatccatcacta 42559633  T
Q  327 acctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  42559632 acctacccgattaaccactcttttcaccgttcaattatatggtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaa 42559543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23825842 - 23825970
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  23825842 gaatcgcctcatgatttcgacagtatcagacatactaaaattacagatttttctgtcaaaattgcctcatgatcactagaatcgcctcatgatttcgaca 23825941  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| || |||| |||||||||    
T  23825942 gtatcagacatgctgaaatcacagatttt 23825970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 3698304 - 3698432
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  3698304 gaatcgcctcatgatttcgacagtatcagacatactaaaattacacatttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgattttgaca 3698403  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| || |||||||| |||||    
T  3698404 gtatcagacatgctgaaattacacatttt 3698432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 296 - 416
Target Start/End: Complemental strand, 20494558 - 20494438
Alignment:
Q  296 accctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaacca 395  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||    
T  20494558 accctatcattaaaacgttaatccatcactaacctacatgattaaccactcttttcaccgttcaattctatagtttctacactttttcattcaaaaatca 20494459  T
Q  396 ataatcaaaacctaatcccaa 416  Q
    ||||| |||||||||||||||    
T  20494458 ataattaaaacctaatcccaa 20494438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 296 - 513
Target Start/End: Complemental strand, 21325974 - 21325755
Alignment:
Q  296 accctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaacca 395  Q
    ||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  21325974 accctatcattaaaatgttaatccatcaccaacctacctgattaaccactcttttcaccattcaattctatggtttctacac-ttttcattcaaaaatca 21325876  T
Q  396 ataatcaaaacctaatcccaagtttctcaatttctaccagaaa----catgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcac 491  Q
    ||| ||||||||||| ||| |  ||| ||| ||| |||| |||    | || ||||||||||||| ||| | ||||||||  ||| | ||| |  |||||    
T  21325875 atattcaaaacctaaacccta-attcccaaattcaaccaaaaaccctcttgctaaatcaaaatcataatcataatctatatcattgagagttagcctcac 21325777  T
Q  492 ccttaccttagttttgcagaaa 513  Q
    ||||||||||| ||||||||||    
T  21325776 ccttaccttagatttgcagaaa 21325755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 289 - 513
Target Start/End: Complemental strand, 21321383 - 21321157
Alignment:
Q  289 tatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattca 388  Q
    |||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  21321383 tatgatcaccctatcattaaaatgttaatccatcactaacctacctgattaaccactcttttcaccgttcaattctatggtttctacac-ttttcattca 21321285  T
Q  389 aaaaccaataatcaaaacctaatcccaagtttctcaatttctaccagaaa----catgttaaatcaaaatcagaattacaatctatactattaaaagtaa 484  Q
    |||| ||||| |||||| |||| ||| |  ||| ||| ||| |||| |||    | || ||||||||||||| ||| | ||||||||  ||| | ||| |    
T  21321284 aaaatcaatattcaaaatctaaacccta-attcccaaattcaaccaaaaaccctcttgctaaatcaaaatcataatcataatctatatcattcagagtta 21321186  T
Q  485 atctcacccttaccttagttttgcagaaa 513  Q
     |||| |||||||||||| ||||||||||    
T  21321185 gtctcgcccttaccttagatttgcagaaa 21321157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 21299415 - 21299301
Alignment:
Q  398 aatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttac 497  Q
    ||||||||||||  ||||| || | |||||||||||||||  | |||||| |||||||||||||| |||| |||||||| |||||||| |||||||||||    
T  21299415 aatcaaaacctagacccaaattcc-caatttctaccagaactaggttaaaccaaaatcagaattataatccatactattgaaagtaaacctcacccttac 21299317  T
Q  498 cttagttttgcagaaa 513  Q
    ||||||||||||||||    
T  21299316 cttagttttgcagaaa 21299301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 431 - 504
Target Start/End: Complemental strand, 25623871 - 25623798
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagtt 504  Q
    |||| |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  25623871 accaaaaacatgttaaaccaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttagtt 25623798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 205 - 370
Target Start/End: Complemental strand, 26859529 - 26859364
Alignment:
Q  205 ttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatca 304  Q
    |||||||| |||| | ||||||||||||||||| ||| |  ||||  ||||||||||| |||||||| ||| ||| ||||||||||||||| ||||||||    
T  26859529 ttttctgcaattttccaccatgggagcctcctttgctccgtttctggaccctaaactcaccaaaatcgtccctaatcatcaccatatgatttccctatca 26859430  T
Q  305 ataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
     || |||   ||  | ||| ||||||||| ||||| |||||||||||||| |||| ||||||||||    
T  26859429 ttagaacaccaattcttcattaacctacccgattatccactcttttcaccgttcagttctatggtt 26859364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 424 - 513
Target Start/End: Original strand, 10607836 - 10607926
Alignment:
Q  424 aatttctaccagaaacatgttaaa-tcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||||||||||  | |||||| ||||||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  10607836 aatttctaccagaactaggttaaactcaaaatcagaattataatccatactattgaaagtaaacctcacccttaccttagttttgcagaaa 10607926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 44432591 - 44432694
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||| ||| | ||||||||||||||||||||| ||| ||||| || |||| ||| ||||    
T  44432591 gacatattgaaattacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcagacatgctgaaatcacatattt 44432689  T
Q  129 ttctg 133  Q
    |||||    
T  44432690 ttctg 44432694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 364517 - 364623
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| |||||||||||||||||||||| |||| ||| ||| | |||||||||  |||||||||| |||  ||||||| | ||||||||||    
T  364517 gacatactgaaatttacagatttttctgtcaaaatcgtctcacgatcactgggatcgcctcacaatttcgacagcatcatacatactgatattacagatt 364616  T
Q  128 tttctgt 134  Q
    |||||||    
T  364617 tttctgt 364623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 20011332 - 20011254
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||||||  | |||||| |||||||||||||| ||||||||||||| | |||||| |||||||||||||||    
T  20011332 caatttctaccagaactaagttaaaccaaaatcagaattataatctatactattgagagtaaacctcacccttacctta 20011254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 426 - 501
Target Start/End: Original strand, 33089840 - 33089915
Alignment:
Q  426 tttctaccagaaacatgttaaat-caaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||||||||||| |||||||||||||| |||||| | |||| |||||||| |||||||||||||||    
T  33089840 tttctaccagaaacatgttaaatccaaaatcagaattataatctaca-tattgaaagtaaacctcacccttacctta 33089915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 26222796 - 26222718
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||||| |||| ||| ||||||||||||| ||| |||||||    
T  26222796 gacatactaaaattacagatttt-ctgtcgaaatcgcttcatgatcactaaaattgcctcatgatttcaacaacatcaga 26222718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 8413889 - 8413838
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  8413889 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 8413838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 11775625 - 11775676
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  11775625 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 11775676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 26222796 - 26222730
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttc 96  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||||| |||| ||| |||||||||||||    
T  26222796 gacatactaaaattacagatttt-ctgtcgaaatcgcttcatgatcactaaaattgcctcatgatttc 26222730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 42559831 - 42559747
Alignment:
Q  49 ttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctg 133  Q
    ||||| ||||||||||||||| ||| ||| | ||||||||| ||||||||||| |||  |||| || | ||||||||||||||||    
T  42559831 ttttcagtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcatacatgctgatattacagatttttctg 42559747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 14397051 - 14397000
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||| ||||| |||||||||||||||||||||||    
T  14397051 atggtttctacacttttcaattaaaaaatcaataatcaaaacctaatcccaa 14397000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 19882859 - 19882910
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| ||||||| |||||||||||||||    
T  19882859 atggtttctacacttttcaattcaaaaatcaataattaaaacctaatcccaa 19882910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 26220099 - 26220153
Alignment:
Q  19 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgatt 74  Q
    ||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  26220099 gacagcatcagacatactaaaattacaga-ttttctgtcgaaatcgcctcatgatt 26220153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 152
Target Start/End: Original strand, 26220099 - 26220153
Alignment:
Q  97 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgatt 152  Q
    ||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  26220099 gacagcatcagacatactaaaattacaga-ttttctgtcgaaatcgcctcatgatt 26220153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 471
Target Start/End: Complemental strand, 22521008 - 22520976
Alignment:
Q  439 catgttaaatcaaaatcagaattacaatctata 471  Q
    |||||||||||||||||||||||||||||||||    
T  22521008 catgttaaatcaaaatcagaattacaatctata 22520976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 19989905 - 19989960
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||| |||| | |||||||||| ||| |||||||| |||||||||||||||    
T  19989905 aatcaaaattagaaattcaatctataccattgaaagtaaacctcacccttacctta 19989960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 20004927 - 20004849
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||| ||||||||||||| | |||||| |||| |  ||||||| |||||||||||||||    
T  20004927 caatttctaccataaacctgttaaaccaaaatcagaattaaaaatctacactact-gaagtaaacctcacccttacctta 20004849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 20387399 - 20387449
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  20387399 atggtttctacacttttcaattcaaaaatcaataa-caaaacctaatcccaa 20387449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 25483582 - 25483535
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatc 412  Q
    |||||||||||||||||  ||||||||| ||||||||||||| |||||    
T  25483582 atggtttctacacttttcaattcaaaaatcaataatcaaaacataatc 25483535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 14415764 - 14415711
Alignment:
Q  448 tcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||||||  |||||||||| | || ||||||||||||||||||||||    
T  14415764 tcaaaatcagaattagcatctatactactgaa-gtaaatctcacccttaccttag 14415711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 513
Target Start/End: Complemental strand, 19987354 - 19987320
Alignment:
Q  479 aagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||| |||||||||||||||||||||||||||    
T  19987354 aagtaaacctcacccttaccttagttttgcagaaa 19987320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 513
Target Start/End: Complemental strand, 30765928 - 30765898
Alignment:
Q  483 aaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||||||||||||||||||    
T  30765928 aaatctcacccttaccttagttttgcagaaa 30765898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 502
Target Start/End: Original strand, 21282996 - 21283052
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagt-aaatctcacccttaccttag 502  Q
    ||||| |||||||||| |||||||||||||| ||||| ||| ||||||||||||||||    
T  21282996 aatcagaatcagaatt-caatctatactattgaaagtaaaacctcacccttaccttag 21283052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 471
Target Start/End: Original strand, 15268175 - 15268207
Alignment:
Q  439 catgttaaatcaaaatcagaattacaatctata 471  Q
    |||||||||||||||||||||||| ||||||||    
T  15268175 catgttaaatcaaaatcagaattataatctata 15268207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 186
Target Start/End: Original strand, 26220139 - 26220167
Alignment:
Q  158 aatcgcctcatgatttcgacagcatcaga 186  Q
    |||||||||||||||||||||||||||||    
T  26220139 aatcgcctcatgatttcgacagcatcaga 26220167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 207
Target Start/End: Original strand, 44432585 - 44432613
Alignment:
Q  179 gcatcagacatattgaaattacagatttt 207  Q
    |||||||||||||||||||||||||||||    
T  44432585 gcatcagacatattgaaattacagatttt 44432613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 44432642 - 44432694
Alignment:
Q  3 atcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctg 55  Q
    ||||||||||||||||||||| ||| ||||| || |||| ||| |||||||||    
T  44432642 atcgcctcatgatttcgacagcatcagacatgctgaaatcacatatttttctg 44432694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 347; Significance: 0; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 502
Target Start/End: Complemental strand, 11208635 - 11208136
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||| || |||||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  11208635 gaatcgcctcatgtttccgacagcatcagacatactaaaattacacatttt-ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 11208537  T
Q  101 gtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattac 200  Q
    | ||| ||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| ||    
T  11208536 gcatcagacatactaaaattacacatttt-ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcac 11208438  T
Q  201 agatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccct 300  Q
    ||||||| ||||||||| ||||||||||| ||||||| ||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11208437 agatttt-ctgcgattttctaccatgggaacctcctttgctccatctcttaaccctaaactctccaaaatcatccataaacatcaccatatgattaccct 11208339  T
Q  301 atcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataat 400  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  11208338 atcattaaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcatccaaaaatcaataat 11208239  T
Q  401 caaaacctaatcccaagtttctcaatttctaccagaaacatgttaaat-caaaatcagaattacaatctatactattaaaagtaaatctcacccttacct 499  Q
    |||||| ||||||||| ||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  11208238 caaaacttaatcccaaattctccaatttctaccagaaacatgttaaatccaaaatcagaattacaatctatactattgaaagtaaacctcacccttacct 11208139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 2 - 502
Target Start/End: Complemental strand, 11201903 - 11201405
Alignment:
Q  2 aatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    |||||||||||| || |||||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11201903 aatcgcctcatgtttccgacagcatcagacatactaaaattacacatttt-ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacag 11201805  T
Q  102 tatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattaca 201  Q
     ||| ||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| |||    
T  11201804 catcagacatactaaaattacacatttt-ctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagtatcagacatgctgaaatcaca 11201706  T
Q  202 gatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattacccta 301  Q
    |||||| ||||||||| ||||||||||| ||||||| ||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11201705 gatttt-ctgcgattttctaccatgggaacctcctttgctccatctcttaaccctaaactctccaaaatcatccataaacatcaccatatgattacccta 11201607  T
Q  302 tcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatc 401  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  11201606 tcattaaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcatccaaaaatcaataatc 11201507  T
Q  402 aaaacctaatcccaagtttctcaatttctaccagaaacatgttaaat-caaaatcagaattacaatctatactattaaaagtaaatctcacccttacctt 500  Q
    ||||| ||||||||| ||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  11201506 aaaacttaatcccaaattctccaatttctaccagaaacatgttaaatccaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctt 11201407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 107 - 416
Target Start/End: Complemental strand, 56115159 - 56114850
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||  ||| | ||||||||| |||||||||||||||| ||||  ||| ||||||||||    
T  56115159 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgaccactgggatcgcctcacgatttcgacagcatcatacatgctgatattacagatt 56115061  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||     
T  56115060 tttctgcgattttctaccatgggagcctccttggctccatttcttaaccctaaactctccaaaatcatccataatcatcaccatatgattactctatcat 56114961  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  56114960 taaaacgttaatccatcactaacctaactgattaaccactctttccaccgttcaattctatggtttctacactttttcattcaaaaatcaataatcaaaa 56114861  T
Q  406 cctaatcccaa 416  Q
    |||||||||||    
T  56114860 cctaatcccaa 56114850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 158 - 412
Target Start/End: Complemental strand, 24046826 - 24046572
Alignment:
Q  158 aatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaacccta 257  Q
    |||||||||| |||||||||||||||| ||||  ||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||  ||||||    
T  24046826 aatcgcctcacgatttcgacagcatcatacatgctgatattacagatttttctgcgattttctaccatgggagcctccttggctctgtttcttgacccta 24046727  T
Q  258 aactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccatt 357  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  24046726 aactctccaaaatcatccataatcatcaccatatgattaccctatcattaaaacgttaatccatctctaacctacctgattaaccactcttttcaccgtt 24046627  T
Q  358 caattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatc 412  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24046626 caattctatggtttctacactttttcattcaaaaatcaataatcaaaacctaatc 24046572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 32 - 207
Target Start/End: Complemental strand, 11208681 - 11208508
Alignment:
Q  32 atactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttc 131  Q
    |||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||| || |||||| ||| ||||||||||||||||| | |||||    
T  11208681 atactaaaattacacatttt-ctgtcaaaatcgcctcatgatttctagaatcgcctcatgtttccgacagcatcagacatactaaaattacaca-ttttc 11208584  T
Q  132 tgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttt 207  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| |||||    
T  11208583 tgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagcatcagacatactaaaattacacatttt 11208508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 32 - 207
Target Start/End: Complemental strand, 11201950 - 11201777
Alignment:
Q  32 atactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttc 131  Q
    |||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||| || |||||| ||| ||||||||||||||||| | |||||    
T  11201950 atactaaaattacacatttt-ctgtcaaaatcgcctcatgatttctaaaatcgcctcatgtttccgacagcatcagacatactaaaattacaca-ttttc 11201853  T
Q  132 tgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttt 207  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| |||||    
T  11201852 tgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgacagcatcagacatactaaaattacacatttt 11201777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 208
Target Start/End: Complemental strand, 8574602 - 8574425
Alignment:
Q  19 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaa 118  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  8574602 gacagcatcagacatactaaaatgacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcagacatactaaaa 8574503  T
Q  119 ttacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattttt 208  Q
    ||||||| |||||||           ||||||| |||||||||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  8574502 ttacaga-ttttctg-----------tcatgatcactagaatcgcctcatgatttcgacagcatcaaacatactaaaattacagattttt 8574425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 8574542 - 8574370
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||           |||| ||||||||||||||||||||||||||    
T  8574542 gaatcgcctcatgatttcgacagcatcagacatactaaaattacagatttt-ctgtca-----------tgatcactagaatcgcctcatgatttcgaca 8574455  T
Q  101 gtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
    | |||  ||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8574454 gcatcaaacatactaaaattacagattttt-tgtcgaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcaga 8574370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 54798487 - 54798355
Alignment:
Q  19 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaa 118  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||    
T  54798487 gacagcatcagacatactaaaattacagatttttctgtgaaaatcgcctcatgatcactagaaccgcctcatgatttcgacagcatcagacatactaaaa 54798388  T
Q  119 ttacagatttttctgtcaaaatcgcctcatgatt 152  Q
    ||||||| ||||||||| ||||||||||||||||    
T  54798387 ttacaga-ttttctgtcgaaatcgcctcatgatt 54798355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 11201827 - 11201700
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11201827 gaatcgcctcatgatttcgacagcatcagacatactaaaattacaca-ttttctgtcaaaatcgcctcatgatttctagaatcgcctcatgatttcgaca 11201729  T
Q  101 gtatctgacatactaaaattacagatttt 129  Q
    ||||| ||||| || |||| |||||||||    
T  11201728 gtatcagacatgctgaaatcacagatttt 11201700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 54798487 - 54798377
Alignment:
Q  97 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaa 196  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||| | |||    
T  54798487 gacagcatcagacatactaaaattacagatttttctgtgaaaatcgcctcatgatcactagaaccgcctcatgatttcgacagcatcagacatactaaaa 54798388  T
Q  197 ttacagatttt 207  Q
    |||||||||||    
T  54798387 ttacagatttt 54798377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 14280760 - 14280851
Alignment:
Q  60 aatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgatt 152  Q
    |||||||||||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  14280760 aatcgcctcatgatcactagaatcgcctcatgatctcgacagcatcagacatactaaaattacaga-ttttctgtcgaaatcgcctcatgatt 14280851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 14280709 - 14280773
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgat 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14280709 gacatactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgat 14280773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 14280709 - 14280773
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgat 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14280709 gacatactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgat 14280773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 422 - 502
Target Start/End: Complemental strand, 35461622 - 35461541
Alignment:
Q  422 tcaatttctaccagaaacatgttaaatcaaaa-tcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||  |||||||||||||||    
T  35461622 tcaatttctaccagaaacatgttaaatcaaaaatcagaattacaatctatactattgtaagtaaacttcacccttaccttag 35461541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 14280760 - 14280829
Alignment:
Q  138 aatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttt 207  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||    
T  14280760 aatcgcctcatgatcactagaatcgcctcatgatctcgacagcatcagacatactaaaattacagatttt 14280829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14280779 - 14280851
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgatt 74  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  14280779 gaatcgcctcatgatctcgacagcatcagacatactaaaattacaga-ttttctgtcgaaatcgcctcatgatt 14280851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 54798423 - 54798355
Alignment:
Q  5 cgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgatt 74  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  54798423 cgcctcatgatttcgacagcatcagacatactaaaattacaga-ttttctgtcgaaatcgcctcatgatt 54798355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 14822309 - 14822387
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||| |||||| |||| ||| |||||||||||||||    
T  14822309 caatttctaccataaacctgttaaacgaaaatcagaattacaatctacactattgaaagcaaacctcacccttacctta 14822387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 16157830 - 16157896
Alignment:
Q  487 ctcacccttaccttagttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttcatctc 556  Q
    ||||||||||||||| ||   |||||||||||||||||||| |||||||| |||||||||||||| ||||    
T  16157830 ctcacccttaccttaatt---cagaaaatcgcacgacacacggttgatctcggctctacttgttcttctc 16157896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 45005856 - 45005907
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  45005856 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 45005907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 56115159 - 56115055
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||  ||| | ||||||||| ||||||||||| |||  |||| || | ||||||||||    
T  56115159 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgaccactgggatcgcctcacgatttcgacagcatcatacatgctgatattacagatt 56115061  T
Q  128 tttctg 133  Q
    ||||||    
T  56115060 tttctg 56115055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 369 - 416
Target Start/End: Original strand, 18230656 - 18230703
Alignment:
Q  369 tttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||    
T  18230656 tttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 18230703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 28386155 - 28386206
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| ||||||||||||| |||||||||    
T  28386155 atggtttctacacttttcaattcaaaaatcaataatcaaaacataatcccaa 28386206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 501
Target Start/End: Complemental strand, 13898915 - 13898861
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||| |||||||||| |||||||||||||| |||||||| ||||| |||||||||    
T  13898915 aatcagaatcagaatt-caatctatactattgaaagtaaacctcactcttacctta 13898861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 513
Target Start/End: Complemental strand, 1650227 - 1650193
Alignment:
Q  479 aagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||| |||||||||||||||||||||||||||    
T  1650227 aagtaaacctcacccttaccttagttttgcagaaa 1650193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 301
Target Start/End: Complemental strand, 16297972 - 16297938
Alignment:
Q  267 aaatcatccataaacatcaccatatgattacccta 301  Q
    |||||||||||||||||||||||| ||||||||||    
T  16297972 aaatcatccataaacatcaccataagattacccta 16297938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 513
Target Start/End: Complemental strand, 45141711 - 45141677
Alignment:
Q  479 aagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||| |||||||||||||||||||||||||||    
T  45141711 aagtaaacctcacccttaccttagttttgcagaaa 45141677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Complemental strand, 8045848 - 8045819
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  8045848 tctcacccttaccttagttttgcagaaaat 8045819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Original strand, 11848153 - 11848182
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  11848153 tctcacccttaccttagttttgcagaaaat 11848182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 514
Target Start/End: Original strand, 14507209 - 14507242
Alignment:
Q  481 gtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||| ||||||||||||||||||||||||||||    
T  14507209 gtaaacctcacccttaccttagttttgcagaaaa 14507242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 186
Target Start/End: Original strand, 14280837 - 14280865
Alignment:
Q  158 aatcgcctcatgatttcgacagcatcaga 186  Q
    |||||||||||||||||||||||||||||    
T  14280837 aatcgcctcatgatttcgacagcatcaga 14280865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 20325814 - 20325866
Alignment:
Q  252 accctaaactctccaaaatcatccataaacatcaccatatgattaccctatca 304  Q
    |||| |||||| || |||| ||||||||||||||||||| | |||||||||||    
T  20325814 accccaaactcacccaaattatccataaacatcaccataaggttaccctatca 20325866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 513
Target Start/End: Original strand, 23122614 - 23122646
Alignment:
Q  481 gtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||| |||||||||||||||||||||||||||    
T  23122614 gtaaacctcacccttaccttagttttgcagaaa 23122646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 513
Target Start/End: Complemental strand, 23723962 - 23723930
Alignment:
Q  481 gtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||| |||||||||||||||||||||||||||    
T  23723962 gtaaacctcacccttaccttagttttgcagaaa 23723930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 513
Target Start/End: Complemental strand, 41528308 - 41528222
Alignment:
Q  427 ttctaccagaaacatgttaaa-tcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||| |||| ||||||| |||||||||||||| | |||| |||| ||| || ||||| |||||||||||||||| ||||||||||    
T  41528308 ttctacca-aaacctgttaaactcaaaatcagaattcagaatcaatacaattgaa-gtaaacctcacccttaccttagatttgcagaaa 41528222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 54798487 - 54798451
Alignment:
Q  175 gacagcatcagacatattgaaattacagatttttctg 211  Q
    |||||||||||||||| | ||||||||||||||||||    
T  54798487 gacagcatcagacatactaaaattacagatttttctg 54798451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 279; Significance: 1e-156; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 107 - 513
Target Start/End: Complemental strand, 8759840 - 8759435
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||| | |||||||||||||| |||||||||| |||||| ||| ||| | |||||||||||||||||||||||||||||||  |||||| ||| ||||    
T  8759840 gacataatgaaattacagatttt-ctgtcaaaattgcctcacgatcactgggatcgcctcatgatttcgacagcatcagacatgctgaaatcacatattt 8759742  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    ||||||||||| ||||||||||||||||||||||| |  || | |||||||||||||||||||||||  |||| |||||||||||||||||||||||| |    
T  8759741 ttctgcgattttctaccatgggagcctccttggctccgtttgttaaccctaaactctccaaaatcattgataatcatcaccatatgattaccctatcatt 8759642  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaac 406  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  8759641 aaaacgttaacccatcactaacatacctgattaaccactcttttcaccattcaattatatggtttctacactttttcattcaaaaatcaataatcaaaac 8759542  T
Q  407 ctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagtttt 506  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| |||    
T  8759541 ctaatcccaaatttcccaatttctaccagaaacatgttaaatcaaaatcagaatttcaatctatactattgaaagtaaacctcacccttaccttagattt 8759442  T
Q  507 gcagaaa 513  Q
    |||||||    
T  8759441 gcagaaa 8759435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 107 - 501
Target Start/End: Original strand, 7430252 - 7430645
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | ||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  7430252 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcagacatactgaaagtacagatt 7430350  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    || ||||||||| ||||||||||||||||||||||| |  |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  7430351 tt-ctgcgattttctaccatgggagcctccttggctccgtttcttaaccctaaactctccaaaatcatccataatcatcaccatatgattaccctatcat 7430449  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7430450 taaaacgttaacccatcactaacctacctgattaaccactctttccaccattcaattctatggtttctacactttttcattcaaaaatcaataatcaaaa 7430549  T
Q  406 cctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    | ||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  7430550 cttaatcacaaatttcccaatttctaccagaaacatgttaaatcaaaatcaggattacaatctatactattgaaagtaaacctcacccttacctta 7430645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 107 - 513
Target Start/End: Complemental strand, 8767586 - 8767196
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||| ||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  8767586 gacataatgaaattacagatttt-ctgtcaaaatcgcctcacgatcactgggaccgcctcatgatttcgacagcatcagacatattgaaattacagattt 8767488  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    | ||||||||| ||||||||||||||||||||||| |  |||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||| |    
T  8767487 t-ctgcgattttctaccatgggagcctccttggctccgtttcttaaccctaaactctctaaaatcatccataatcatcaccatatgattaccctatcatt 8767389  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaac 406  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8767388 aaaacgttaacccatcactaacatacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaatcaataatcaaaac 8767289  T
Q  407 ctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagtttt 506  Q
    |||||||||| |||| |||||||||| ||              |||||||||||| |||||||||||||| |||||||| |||||||||||||||| |||    
T  8767288 ctaatcccaaatttcccaatttctactag--------------aaaatcagaatttcaatctatactattgaaagtaaacctcacccttaccttagattt 8767203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 179 - 502
Target Start/End: Complemental strand, 14593954 - 14593631
Alignment:
Q  179 gcatcagacatattgaaatt-acagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccat 277  Q
    |||||| ||||| ||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| || |||| |||||||||||||||||||||||||||    
T  14593954 gcatcaaacatactgaaatttacagatttt-ctgcgattttctaccatgggaacctccttggctccatttcttaaccctaaactctccaaaatcatccat 14593856  T
Q  278 aaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacac 377  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  14593855 aatcatcaccatatgattaccctatcattaaaacgttaacccatcactaacctacctgattaaccactctttacaccattcaattatatggtttctacac 14593756  T
Q  378 tttttcattcaaaaaccaataatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactatta 477  Q
    ||||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  14593755 tttttcattcaaaaatcaataatcaaaacttaatcccaaatttcccaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattg 14593656  T
Q  478 aaagtaaatctcacccttaccttag 502  Q
    |||||||| ||||||||||||||||    
T  14593655 aaagtaaacctcacccttaccttag 14593631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 107 - 416
Target Start/End: Original strand, 1254486 - 1254795
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | ||||||||| |||||||||||||||| ||||  ||| ||||||||||    
T  1254486 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcatacatgctgatattacagatt 1254584  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||||||||| ||||||||||||| ||||||||| |  || |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  1254585 tttctgcgattttctaccatgggagcatccttggctccgttttttgaccctaaactctccaaaatcatccataatcatcaccatatgattaccctatcat 1254684  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    | |||| |||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  1254685 tgaaacattaatccatcactaacctacccgattaaccactcttttcaccgttcaattctatggtttctacactttttcattcaaaagtcaataatcaaaa 1254784  T
Q  406 cctaatcccaa 416  Q
    |||||||||||    
T  1254785 cctaatcccaa 1254795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 107 - 416
Target Start/End: Complemental strand, 34296591 - 34296281
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||| ||||  ||| ||||||||||    
T  34296591 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactaggatcgcctcacgatttcgacagcatcatacatgctgatattacagatt 34296493  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctca-accctaaactctccaaaatcatccataaacatcaccatatgattaccctatca 304  Q
    |||||||||||| ||||||||||||||||||||||| |  || |   ||| |||| ||||||||||||||||||| | | ||||||||||||||||||||    
T  34296492 tttctgcgattttctaccatgggagcctccttggctgcgtttttttgaccttaaattctccaaaatcatccataatccttaccatatgattaccctatca 34296393  T
Q  305 ataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaa 404  Q
     | ||| ||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  34296392 ttgaaatgttaatccatcactaacctacccgattaaccactcttttcaccgttcaattctatggtttctacactttttcattcaaaagtcaataatcaaa 34296293  T
Q  405 acctaatcccaa 416  Q
    ||||||||||||    
T  34296292 acctaatcccaa 34296281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 107 - 416
Target Start/End: Original strand, 1017 - 1316
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | |||| |||| ||||||||| |||||| |||| |||| ||||||||||    
T  1017 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgtctcacgatttcgacggcatcatacatgttgatattacagatt 1115  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    ||||| |||||| |||||||||||| |||||||||| |  || |  ||||||||||||||| |||||||          ||||||||||||||||||||     
T  1116 tttctacgattttctaccatgggagtctccttggctccgttttttgaccctaaactctccataatcatc----------accatatgattaccctatcat 1205  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  1206 taaaacgttaatccatcactaagctacccgattaaccactcttttcaccgttcaattctatggtttctacactttttcattcaaaagtcaataatcaaaa 1305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 108 - 370
Target Start/End: Complemental strand, 34140949 - 34140687
Alignment:
Q  108 acatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttt 207  Q
    ||||||| |||||||||||||| ||||||||| ||||||| ||| ||| ||||| |||||  ||||||||||||||| ||||  |||||| ||| |||||    
T  34140949 acatactgaaattacagatttt-ctgtcaaaaccgcctcacgatcactggaatcacctcacaatttcgacagcatcatacatgctgaaatcacatatttt 34140851  T
Q  208 tctgcgatttcctaccatgggagcctccttggcttcaattctcaa-ccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    | |||||||| ||||||||||||||||||||||| |  ||||  | ||||||||||||||||||| |||||||  ||||||||||||||||||||||| |    
T  34140850 tttgcgattttctaccatgggagcctccttggctccgtttcttgagccctaaactctccaaaatcgtccataattatcaccatatgattaccctatcatt 34140751  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    | |||||||| || |||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  34140750 agaacgttaatccctcactaacctacctaattaaccactcatttcaccgttcaattctatggtt 34140687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 108 - 370
Target Start/End: Complemental strand, 34153565 - 34153303
Alignment:
Q  108 acatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttt 207  Q
    ||||||| |||||||||||||| ||||||||| ||||||| ||| ||| ||||| |||||  ||||||||||||||| ||||  |||||| ||| |||||    
T  34153565 acatactgaaattacagatttt-ctgtcaaaaccgcctcacgatcactggaatcacctcacaatttcgacagcatcatacatgctgaaatcacatatttt 34153467  T
Q  208 tctgcgatttcctaccatgggagcctccttggcttcaattctcaa-ccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    | |||||||| ||||||||||||||||||||||| |  ||||  | ||||||||||||||||||| |||||||  ||||||||||||||||||||||| |    
T  34153466 tttgcgattttctaccatgggagcctccttggctccgtttcttgagccctaaactctccaaaatcgtccataattatcaccatatgattaccctatcatt 34153367  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    | |||||||| || |||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  34153366 agaacgttaatccctcactaacctacctaattaaccactcatttcaccgttcaattctatggtt 34153303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 16448298 - 16448209
Alignment:
Q  97 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16448298 gacagcatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcaga 16448209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 329 - 416
Target Start/End: Original strand, 8188 - 8275
Alignment:
Q  329 ctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  8188 ctacccgattaaccactcttttcaccgttcaattctatggtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaa 8275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 16448298 - 16448216
Alignment:
Q  19 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16448298 gacagcatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacag 16448216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 282 - 370
Target Start/End: Complemental strand, 7680836 - 7680748
Alignment:
Q  282 atcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    ||||||||||||||||||||||| || ||| |||| || |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  7680836 atcaccatatgattaccctatcattagaacattaatccctcactaacctacctgattaaccactcttttcactgttcaattctatggtt 7680748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 14725285 - 14725399
Alignment:
Q  398 aatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttac 497  Q
    ||||||||||||  ||||| || | |||||||||||||||  | |||||| |||||||||||||| |||| |||||||| |||||||| |||||||||||    
T  14725285 aatcaaaacctagacccaaatt-cacaatttctaccagaactaggttaaaccaaaatcagaattaaaatccatactattgaaagtaaacctcacccttac 14725383  T
Q  498 cttagttttgcagaaa 513  Q
    ||||||||||||||||    
T  14725384 cttagttttgcagaaa 14725399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 8767586 - 8767487
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||| ||| | | ||||||||||||||||||| ||| |||||| | |||||||||||||    
T  8767586 gacataatgaaattacagatttt-ctgtcaaaatcgcctcacgatcactgggaccgcctcatgatttcgacagcatcagacatattgaaattacagattt 8767488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 7430252 - 7430352
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | ||||||||| ||||||||||| ||| |||||||| ||| ||||||||    
T  7430252 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcagacatactgaaagtacagatt 7430350  T
Q  128 tt 129  Q
    ||    
T  7430351 tt 7430352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 34296591 - 34296487
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||||| ||||||||| ||||||||||| |||  |||| || | ||||||||||    
T  34296591 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactaggatcgcctcacgatttcgacagcatcatacatgctgatattacagatt 34296493  T
Q  128 tttctg 133  Q
    ||||||    
T  34296492 tttctg 34296487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 8759840 - 8759737
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    |||||| | |||||||||||||| |||||||||| |||||| ||| ||| | ||||||||||||||||||||| ||| ||||| || |||| ||| ||||    
T  8759840 gacataatgaaattacagatttt-ctgtcaaaattgcctcacgatcactgggatcgcctcatgatttcgacagcatcagacatgctgaaatcacatattt 8759742  T
Q  129 ttctg 133  Q
    |||||    
T  8759741 ttctg 8759737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 1254486 - 1254590
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | ||||||||| ||||||||||| |||  |||| || | ||||||||||    
T  1254486 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacgatttcgacagcatcatacatgctgatattacagatt 1254584  T
Q  128 tttctg 133  Q
    ||||||    
T  1254585 tttctg 1254590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 13765258 - 13765309
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  13765258 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 13765309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 23225998 - 23225947
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  23225998 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 23225947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 23956774 - 23956825
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  23956774 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 23956825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 23415816 - 23415867
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||||||||| |||||  ||||||||| |||||||||||||||||||||||    
T  23415816 atggtttctacgcttttcaattcaaaaatcaataatcaaaacctaatcccaa 23415867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 19819847 - 19819916
Alignment:
Q  445 aaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||||||||||||| | |||||| || ||| || ||||| ||||||||||||||||||||||||||||    
T  19819847 aaatcaaaatcagaattcagaatctacacaattgaa-gtaaacctcacccttaccttagttttgcagaaaa 19819916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 416
Target Start/End: Original strand, 27557575 - 27557625
Alignment:
Q  366 tggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||||||||||||||  ||||||||| ||||||||||||| |||||||||    
T  27557575 tggtttctacacttttcaattcaaaaatcaataatcaaaacataatcccaa 27557625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 7680914 - 7680865
Alignment:
Q  158 aatcgcctcatgatttcgacagcatcagacatattgaaattacagatttt 207  Q
    |||||| ||||||||| || ||||||||||||| ||||||||||||||||    
T  7680914 aatcgcttcatgattttgatagcatcagacatactgaaattacagatttt 7680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 556
Target Start/End: Original strand, 9187535 - 9187602
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttcatctc 556  Q
    |||||||||||||||| ||   ||||||||||||||||  || |||||| |||||||||||||||| ||||    
T  9187535 tctcacccttaccttaatt---cagaaaatcgcacgacttacggttgattttggctctacttgttcttctc 9187602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 22910390 - 22910334
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||| |  ||||||||||||| | |||||| |||||||||||||||    
T  22910390 aaatcaaaatcagaactttaatctatactattgagagtaaacctcacccttacctta 22910334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 34140949 - 34140850
Alignment:
Q  30 acatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttt 129  Q
    ||||||| |||||||||||||| ||||||||| ||||||| ||| ||| ||||| |||||  |||||||||| |||  |||| || |||| ||| |||||    
T  34140949 acatactgaaattacagatttt-ctgtcaaaaccgcctcacgatcactggaatcacctcacaatttcgacagcatcatacatgctgaaatcacatatttt 34140851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 34153565 - 34153466
Alignment:
Q  30 acatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttt 129  Q
    ||||||| |||||||||||||| ||||||||| ||||||| ||| ||| ||||| |||||  |||||||||| |||  |||| || |||| ||| |||||    
T  34153565 acatactgaaattacagatttt-ctgtcaaaaccgcctcacgatcactggaatcacctcacaatttcgacagcatcatacatgctgaaatcacatatttt 34153467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 501
Target Start/End: Complemental strand, 14995288 - 14995241
Alignment:
Q  454 tcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||| ||||||| |||||| |||||||| |||||||||||||||    
T  14995288 tcagaatttcaatctacactattgaaagtaaacctcacccttacctta 14995241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 501
Target Start/End: Complemental strand, 17026450 - 17026400
Alignment:
Q  450 aaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||||||||||||| | ||| ||||||||||||||||||    
T  17026450 aaaatcagaatt-caatctatactattgagagtgaatctcacccttacctta 17026400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 18315194 - 18315116
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||| ||||||||||||| | ||||||||||| |  ||| ||| |||||||||||||||    
T  18315194 caatttctaccataaacctgttaaaccaaaatcagaattaaaaatctatactact-gaagcaaacctcacccttacctta 18315116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 504
Target Start/End: Complemental strand, 22888847 - 22888788
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagtt 504  Q
    ||||||||||||||| |  ||||||| ||||| | |||||| ||||||||||||||||||    
T  22888847 aaatcaaaatcagaactttaatctatgctattgagagtaaacctcacccttaccttagtt 22888788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 501
Target Start/End: Original strand, 23106171 - 23106230
Alignment:
Q  442 gttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||| ||||||||||||| || |||| | |||| |||||||| |||||||||||||||    
T  23106171 gttaaaccaaaatcagaatttcattctacattattgaaagtaaacctcacccttacctta 23106230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 29266341 - 29266395
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||| |||||| |||||||||||||| | |||||| |||||||||||||||    
T  29266341 aatcaaaattagaatt-caatctatactattgagagtaaacctcacccttacctta 29266395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 8767533 - 8767487
Alignment:
Q  5 cgcctcatgatttcgacagtatctgacatactaaaattacagatttt 51  Q
    ||||||||||||||||||| ||| |||||| | ||||||||||||||    
T  8767533 cgcctcatgatttcgacagcatcagacatattgaaattacagatttt 8767487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 513
Target Start/End: Complemental strand, 93728 - 93664
Alignment:
Q  448 tcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||| ||||||||| ||||||||||| | || ||||| ||||||||||||||||  |||||||||    
T  93728 tcaaattcagaattaaaatctatactactgaa-gtaaacctcacccttaccttagaattgcagaaa 93664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Complemental strand, 930111 - 930082
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  930111 tctcacccttaccttagttttgcagaaaat 930082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 410
Target Start/End: Original strand, 1588655 - 1588700
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaa 410  Q
    |||||||||||||||||  ||||||||| | |||||||||||||||    
T  1588655 atggtttctacacttttcaattcaaaaatctataatcaaaacctaa 1588700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 7680914 - 7680834
Alignment:
Q  80 aatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatc 161  Q
    |||||| ||||||||| || || ||| |||||||| |||||||||| |||||| || ||||| ||||||||| ||| |||||    
T  7680914 aatcgcttcatgattttgatagcatcagacatactgaaattacaga-ttttctatccaaatctcctcatgatcactggaatc 7680834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 7680914 - 7680834
Alignment:
Q  2 aatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatc 83  Q
    |||||| ||||||||| || || ||| |||||||| |||||||||| |||||| || ||||| ||||||||| ||| |||||    
T  7680914 aatcgcttcatgattttgatagcatcagacatactgaaattacaga-ttttctatccaaatctcctcatgatcactggaatc 7680834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Original strand, 12168402 - 12168431
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  12168402 tctcacccttaccttagttttgcagaaaat 12168431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 502
Target Start/End: Original strand, 14583915 - 14583971
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||||||||| |||||||||||||  ||| ||| |||||| |||||||||    
T  14583915 aaatcaaaatcagaattataatctatactatt-gaagcaaacctcaccattaccttag 14583971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Original strand, 19287311 - 19287340
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  19287311 tctcacccttaccttagttttgcagaaaat 19287340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Complemental strand, 19785885 - 19785856
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  19785885 tctcacccttaccttagttttgcagaaaat 19785856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Original strand, 19878495 - 19878524
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  19878495 tctcacccttaccttagttttgcagaaaat 19878524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Complemental strand, 29614162 - 29614133
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  29614162 tctcacccttaccttagttttgcagaaaat 29614133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 416
Target Start/End: Complemental strand, 31021859 - 31021810
Alignment:
Q  368 gtttctacactttttcattcaaaaac-caataatcaaaacctaatcccaa 416  Q
    ||||||||||||||  |||||||||  |||||||||||||||||||||||    
T  31021859 gtttctacacttttcaattcaaaaaatcaataatcaaaacctaatcccaa 31021810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 1017 - 1120
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | |||| |||| ||||||||| | |||  ||||  | | ||||||||||    
T  1017 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgtctcacgatttcgacggcatcatacatgttgatattacagatt 1115  T
Q  128 tttct 132  Q
    |||||    
T  1116 tttct 1120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 7430304 - 7430352
Alignment:
Q  3 atcgcctcatgatttcgacagtatctgacatactaaaattacagatttt 51  Q
    ||||||||| ||||||||||| ||| |||||||| ||| ||||||||||    
T  7430304 atcgcctcacgatttcgacagcatcagacatactgaaagtacagatttt 7430352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 8759789 - 8759737
Alignment:
Q  3 atcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctg 55  Q
    ||||||||||||||||||||| ||| ||||| || |||| ||| |||||||||    
T  8759789 atcgcctcatgatttcgacagcatcagacatgctgaaatcacatatttttctg 8759737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 380
Target Start/End: Original strand, 14583819 - 14583855
Alignment:
Q  344 ctcttttcaccattcaattctatggtttctacacttt 380  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  14583819 ctcttttcaccattcaattttatgatttctacacttt 14583855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 419 - 513
Target Start/End: Complemental strand, 14615514 - 14615420
Alignment:
Q  419 ttctcaatttctaccagaaacatgttaaa-tcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||||||| |||| |||| ||||||| ||||||||||||||  | |||||||||| | || | ||| |||||||||||||||| ||||||||||    
T  14615514 ttctcaatttcaacca-aaacctgttaaactcaaaatcagaattcaatatctatactactgaa-gcaaacctcacccttaccttagatttgcagaaa 14615420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 16448298 - 16448262
Alignment:
Q  175 gacagcatcagacatattgaaattacagatttttctg 211  Q
    |||||||||||||||| | ||||||||||||||||||    
T  16448298 gacagcatcagacatactaaaattacagatttttctg 16448262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 450 - 513
Target Start/End: Complemental strand, 19587782 - 19587719
Alignment:
Q  450 aaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||| | ||||||||||| | || | ||| |||||||||||||||||||||||||||    
T  19587782 aaaatcagaatttagaatctatactaatgaa-gcaaacctcacccttaccttagttttgcagaaa 19587719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 257; Significance: 1e-143; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 107 - 502
Target Start/End: Complemental strand, 10240 - 9845
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | |||||||||  ||||||||||||||| ||||  ||| ||||||||||    
T  10240 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacaatttcgacagcatcatacatgctgatattacagatt 10142  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||||||||| |||||||||||||||||||||||  | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  10141 tttctgcgattttctaccatgggagcctccttggctcgatttcttaaccctaaactctccaaaatcatccataatcatcaccatatgattaccctatcat 10042  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  10041 taaaacgttaatccatcactaacctacctgatcaaccactcttttcaccgttcaattctatgttttctacactttttcattcaaaaatcaataatcaaaa 9942  T
Q  406 cctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||| |||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  9941 cctaattccaaatttcccaatttctactagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaacagcacccttaccttag 9845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 10240 - 10136
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | |||||||||  |||||||||| |||  |||| || | ||||||||||    
T  10240 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacaatttcgacagcatcatacatgctgatattacagatt 10142  T
Q  128 tttctg 133  Q
    ||||||    
T  10141 tttctg 10136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 257; Significance: 1e-143; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 107 - 502
Target Start/End: Original strand, 3067 - 3462
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | |||||||||  ||||||||||||||| ||||  ||| ||||||||||    
T  3067 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacaatttcgacagcatcatacatgctgatattacagatt 3165  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||||||||| |||||||||||||||||||||||  | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  3166 tttctgcgattttctaccatgggagcctccttggctcgatttcttaaccctaaactctccaaaatcatccataatcatcaccatatgattaccctatcat 3265  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  3266 taaaacgttaatccatcactaacctacctgatcaaccactcttttcaccgttcaattctatgttttctacactttttcattcaaaaatcaataatcaaaa 3365  T
Q  406 cctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||| |||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  3366 cctaattccaaatttcccaatttctactagaaacatgttaaatcaaaatcagaattacaatctatactattgaaagtaaacagcacccttaccttag 3462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 3067 - 3171
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | |||||||||  |||||||||| |||  |||| || | ||||||||||    
T  3067 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcacaatttcgacagcatcatacatgctgatattacagatt 3165  T
Q  128 tttctg 133  Q
    ||||||    
T  3166 tttctg 3171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 214; Significance: 1e-117; HSPs: 2)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 107 - 416
Target Start/End: Original strand, 7613 - 7921
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||| || | |||| |||||||||||    
T  7613 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacgtgttgatattacagattt 7711  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    ||||||||||| ||||||||||||||||||||||| |  ||||  ||||||||||||||||||| |||||||| |||||||||||||||||||||||| |    
T  7712 ttctgcgattttctaccatgggagcctccttggctccgtttcttgaccctaaactctccaaaataatccataatcatcaccatatgattaccctatcatt 7811  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaac 406  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7812 aaaacgttaatccatcactaacctacctgattaaccactcttttccccgttcaattctatggtttctacactttttcattcaaaaatcaataatcaaaac 7911  T
Q  407 ctaatcccaa 416  Q
    ||||||||||    
T  7912 ctaatcccaa 7921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 7613 - 7684
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||||||||    
T  7613 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacag 7684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 188; Significance: 1e-101; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 87 - 370
Target Start/End: Original strand, 49335 - 49617
Alignment:
Q  87 tcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
    ||||||||| ||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||| |||| |    
T  49335 tcatgattttgacagcatcagacatactgaaattacagatttt-ctgtcaaaatcgcctcatgataattggaatcgcctcatgatttcgacagtatcata 49433  T
Q  187 catattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcac 286  Q
    | |  |||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  49434 cttgctgaaatcacaaatttttctgcgattttctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcgtccataatcatcac 49533  T
Q  287 catatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    |||||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49534 catatgattaccctatcattagaacgttaatccctcactaacctacctgattaaccactcttttcaccgttcaattctatggtt 49617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 49335 - 49430
Alignment:
Q  9 tcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatc 105  Q
    ||||||||| ||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||| | | |||||||||||||||||||||||||||    
T  49335 tcatgattttgacagcatcagacatactgaaattacagatttt-ctgtcaaaatcgcctcatgataattggaatcgcctcatgatttcgacagtatc 49430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 107 - 416
Target Start/End: Original strand, 726 - 1035
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||||| | | | ||||||||| |||||||||||||||| | ||  ||| ||| ||||||    
T  726 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcatgatcattgggatcgcctcacgatttcgacagcatcatatatgctgatattgcagatt 824  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||||||||| ||||||||||||||||||||||| |  || |  ||||||||||||| |||||||||||||| ||||||||||||||||||||||||     
T  825 tttctgcgattttctaccatgggagcctccttggctccgttttttgaccctaaactctctaaaatcatccataatcatcaccatatgattaccctatcat 924  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    | ||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  925 tgaaacgttaatccatcactaacctacccgattaaccactcttttcaccgttcaattctatggtttctacactttttcattcaaaaatcaataatcaaaa 1024  T
Q  406 cctaatcccaa 416  Q
    |||||||||||    
T  1025 cctaatcccaa 1035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 726 - 798
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||||| | | | ||||||||| |||||||||||    
T  726 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcatgatcattgggatcgcctcacgatttcgacag 798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 183; Significance: 1e-98; HSPs: 7)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 107 - 412
Target Start/End: Complemental strand, 22502 - 22197
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | |||||||||  |||||||| |||||| ||||  ||| ||||||||||    
T  22502 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactggtatcgcctcactatttcgactgcatcatacatgctgatattacagatt 22404  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    ||||||||||||  ||||||||||||||||||||||    ||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  22403 tttctgcgattttataccatgggagcctccttggctctgtttcttgaccctaaactctccaaaatcatccataatcatcaccatatgattaccctatcat 22304  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacactttttcattcaaaaaccaataatcaaaa 405  Q
    ||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22303 taaaacgttaatccatctctatcctacctgattaaccactcttttcacctttcaattctatggtttctacactttttcattcaaaaatcaataatcaaaa 22204  T
Q  406 cctaatc 412  Q
    |||||||    
T  22203 cctaatc 22197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 158 - 416
Target Start/End: Complemental strand, 17550 - 17293
Alignment:
Q  158 aatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaacccta 257  Q
    |||||||||| |||||||||||||||| ||||  ||| |||||| ||||||||||||||| ||||||||||||||||||||||| |  ||||  ||||||    
T  17550 aatcgcctcacgatttcgacagcatcatacatgctgatattacatatttttctgcgattttctaccatgggagcctccttggctccgtttcttgacccta 17451  T
Q  258 aactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccatt 357  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| |||||| |||| ||||| ||||||||||||||||||||||||||||||| ||    
T  17450 aactctccaaaatcattcataatcatcaccatatgattaccctatcattaaaactttaatccatctctaacctacctgattaaccactcttttcaccgtt 17351  T
Q  358 caattctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  17350 caattctatggtttctacac-ttttcattcaaaaatcaataatcaaaacctaatcccaa 17293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 23316 - 23379
Alignment:
Q  127 ttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacata 190  Q
    ||||||||||| ||||||||| ||| ||| | ||||||||||||||||||||||||||||||||    
T  23316 ttttctgtcaacatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcagacata 23379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 23316 - 23379
Alignment:
Q  49 ttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacata 112  Q
    ||||||||||| ||||||||| ||| ||| | ||||||||||||||||||||| ||| ||||||    
T  23316 ttttctgtcaacatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcagacata 23379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 22502 - 22398
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| | |||||||||  |||||||| | |||  |||| || | ||||||||||    
T  22502 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactggtatcgcctcactatttcgactgcatcatacatgctgatattacagatt 22404  T
Q  128 tttctg 133  Q
    ||||||    
T  22403 tttctg 22398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 17580 - 17536
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgatt 74  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||    
T  17580 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatt 17536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 17580 - 17541
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctca 147  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  17580 gacatactgaaattacagatttt-ctgtcaaaatcgcctca 17541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 175; Significance: 6e-94; HSPs: 7)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 107 - 349
Target Start/End: Complemental strand, 123883 - 123643
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  123883 gacatattgaaattacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 123785  T
Q  207 ttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaat 306  Q
    | ||||||||| ||||||||||||||||||||||| |  |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  123784 t-ctgcgattttctaccatgggagcctccttggctccgtttcttaaccctaaactctccaaaatcatccataatcatcaccatatgattaccctatcatt 123686  T
Q  307 aaaacgttaacccatcactaacctacctgattaaccactcttt 349  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  123685 aaaacgttaacccatcactaacctacctgattaaccactcttt 123643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 36521 - 36599
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| | | |||||| |||||||||||||||    
T  36521 caatttctaccagaaacatgttaaaccaaaatcagaattataatctatactaatgagagtaaacctcacccttacctta 36599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 123883 - 123784
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagattt 128  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||| ||| | ||||||||||||||||||||| ||| |||||| | |||||||||||||    
T  123883 gacatattgaaattacagatttt-ctgtcaaaatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 123785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 426 - 501
Target Start/End: Original strand, 143625 - 143700
Alignment:
Q  426 tttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||| |||||||| ||||||    
T  143625 tttctaccagaaccatgttaaaccaaaatcagaattataatctatactattgaaagtaaacctcaccctgacctta 143700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 513
Target Start/End: Original strand, 67190 - 67256
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||| ||||| |||| |||||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  67190 aatcagaatcaaaatt-caatctatactattgaaagtaaacctcacccttaccttagatttgcagaaa 67256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 123832 - 123784
Alignment:
Q  3 atcgcctcatgatttcgacagtatctgacatactaaaattacagatttt 51  Q
    ||||||||||||||||||||| ||| |||||| | ||||||||||||||    
T  123832 atcgcctcatgatttcgacagcatcagacatattgaaattacagatttt 123784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 207
Target Start/End: Complemental strand, 123889 - 123861
Alignment:
Q  179 gcatcagacatattgaaattacagatttt 207  Q
    |||||||||||||||||||||||||||||    
T  123889 gcatcagacatattgaaattacagatttt 123861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 156; Significance: 1e-82; HSPs: 13)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 107 - 377
Target Start/End: Original strand, 26655 - 26925
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||| ||||  ||| |||||||||     
T  26655 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacatgctgatattacagata 26753  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||||||||| |||||||| ||||||||||||||    ||||  |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||     
T  26754 tttctgcgattttctaccatgagagcctccttggctctgtttcttgaccctaaactctccaaaatcatccataatcatcatcatctgattaccctatcat 26853  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacac 377  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  26854 taaaacgttaatccatcactaacctacccgattaaccactcttttcaccgttcaattctatggtttctacac 26925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 107 - 377
Target Start/End: Original strand, 28037 - 28307
Alignment:
Q  107 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatt 205  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||| ||||  ||| |||||||||     
T  28037 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacatgctgatattacagata 28135  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||||||||| |||||||| ||||||||||||||    ||||  |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||     
T  28136 tttctgcgattttctaccatgagagcctccttggctctgtttcttgaccctaaactctccaaaatcatccataatcatcatcatctgattaccctatcat 28235  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtttctacac 377  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  28236 taaaacgttaatccatcactaacctacccgattaaccactcttttcaccgttcaattctatggtttctacac 28307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 107 - 370
Target Start/End: Original strand, 14579 - 14842
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagat-t 205  Q
    |||||| | |||||||||||||| |||||  ||||| |||| ||| ||||| ||| |||||||||||||||||||||| ||||  |||||| |||||| |    
T  14579 gacatattgaaattacagatttt-ctgtcccaatcggctcacgatcactaggatctcctcatgatttcgacagcatcatacatgctgaaatcacagatat 14677  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    ||||||||| || |||||||||||||||||||||||    ||||  |||||||||||||||||||| ||||||| ||||||||||||||||||||||||     
T  14678 tttctgcgaatttctaccatgggagcctccttggctctgtttcttgaccctaaactctccaaaatcgtccataatcatcaccatatgattaccctatcat 14777  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    || |||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  14778 tagaacgttaatccatcactaacctacctgattaaccactcttttccccgttcaattctatggtt 14842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 138 - 370
Target Start/End: Original strand, 16629 - 16862
Alignment:
Q  138 aatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagat-ttttctgcgatttcctaccatgggagcctcct 236  Q
    |||||||||| ||| ||| | |||||||||||||||||||||||||| ||||  |||||| |||||| |||||||||| || ||||||||||||||||||    
T  16629 aatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcatacatgctgaaatcacagatattttctgcgaatttctaccatgggagcctcct 16728  T
Q  237 tggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctga 336  Q
    |||||    ||||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||| || |||||||| |||||||||||||||||||    
T  16729 tggctctgtttcttgaccctaaactctccaaaatcgtccataatcatcaccatatgattaccctatcattagaacgttaatccatcactaacctacctga 16828  T
Q  337 ttaaccactcttttcaccattcaattctatggtt 370  Q
    ||||||||||||||| || |||||||||||||||    
T  16829 ttaaccactcttttccccgttcaattctatggtt 16862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 107 - 348
Target Start/End: Original strand, 7948 - 8189
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagat-t 205  Q
    |||||| | |||||||||||||| |||||  ||||| |||| ||| ||||| ||| |||||||||||||||||||||| ||||  |||||| |||||| |    
T  7948 gacatattgaaattacagatttt-ctgtcccaatcggctcacgatcactaggatctcctcatgatttcgacagcatcatacatgctgaaatcacagatat 8046  T
Q  206 tttctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    |||||||||||| |||||||||||||||||||||||    ||||  |||||||||||||||||||| ||||||| ||||||||||||||||||||||||     
T  8047 tttctgcgattttctaccatgggagcctccttggctctgtttcttgaccctaaactctccaaaatcgtccataatcatcaccatatgattaccctatcat 8146  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactctt 348  Q
    || || ||||| ||||||||||||||||||||||| |||||||    
T  8147 tagaatgttaatccatcactaacctacctgattaatcactctt 8189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 138 - 348
Target Start/End: Original strand, 18649 - 18860
Alignment:
Q  138 aatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagat-ttttctgcgatttcctaccatgggagcctcct 236  Q
    |||||||||| ||| ||| | |||||||||||||||||||||||||| ||||  |||||| |||||| |||||||||| || ||||||||||||||||||    
T  18649 aatcgcctcacgatcactgggatcgcctcatgatttcgacagcatcatacatgctgaaatcacagatattttctgcgaatttctaccatgggagcctcct 18748  T
Q  237 tggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctga 336  Q
    |||||    ||||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||| || || ||||| |||||||||||||||||||    
T  18749 tggctctgtttcttgaccctaaactctccaaaatcgtccataatcatcaccatatgattaccctatcattagaatgttaatccatcactaacctacctga 18848  T
Q  337 ttaaccactctt 348  Q
    |||| |||||||    
T  18849 ttaatcactctt 18860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 26655 - 26759
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||| ||||||||||| |||  |||| || | |||||||||     
T  26655 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacatgctgatattacagata 26753  T
Q  128 tttctg 133  Q
    ||||||    
T  26754 tttctg 26759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 28037 - 28141
Alignment:
Q  29 gacatactaaaatt-acagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatt 127  Q
    |||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||| ||||||||||| |||  |||| || | |||||||||     
T  28037 gacatactgaaatttacagatttt-ctgtcaaaatcgcctcacgatcactggaatcgcctcacgatttcgacagcatcatacatgctgatattacagata 28135  T
Q  128 tttctg 133  Q
    ||||||    
T  28136 tttctg 28141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 501
Target Start/End: Complemental strand, 40867 - 40797
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  |||||||  |||||||| ||||| |||||| |||||| |||||||| |||||||||||||||    
T  40867 accagaactatgttaacccaaaatcaaaattataatctacactattgaaagtaaacctcacccttacctta 40797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 7948 - 8044
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagat 126  Q
    |||||| | |||||||||||||| |||||  ||||| |||| ||| ||||| ||| ||||||||||||||||| |||  |||| || |||| ||||||    
T  7948 gacatattgaaattacagatttt-ctgtcccaatcggctcacgatcactaggatctcctcatgatttcgacagcatcatacatgctgaaatcacagat 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 14579 - 14675
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagat 126  Q
    |||||| | |||||||||||||| |||||  ||||| |||| ||| ||||| ||| ||||||||||||||||| |||  |||| || |||| ||||||    
T  14579 gacatattgaaattacagatttt-ctgtcccaatcggctcacgatcactaggatctcctcatgatttcgacagcatcatacatgctgaaatcacagat 14675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 207
Target Start/End: Original strand, 7942 - 7970
Alignment:
Q  179 gcatcagacatattgaaattacagatttt 207  Q
    |||||||||||||||||||||||||||||    
T  7942 gcatcagacatattgaaattacagatttt 7970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 207
Target Start/End: Original strand, 14573 - 14601
Alignment:
Q  179 gcatcagacatattgaaattacagatttt 207  Q
    |||||||||||||||||||||||||||||    
T  14573 gcatcagacatattgaaattacagatttt 14601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 149; Significance: 2e-78; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 107 - 370
Target Start/End: Original strand, 10429 - 10692
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagattt 206  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||| ||  ||||||||||||||||| |||||||||| |||| ||||||| ||| ||||    
T  10429 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcacaggaatcgcctcatgattttgacagcatcatacatgttgaaatcacaaattt 10527  T
Q  207 t-tctgcgatttcctaccatgggagcctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaa 305  Q
    | |||||||||| |||||||||||| |||||||||| |  ||||  |||||||||||||||||||  ||||||| ||||||||||||||||||||||||     
T  10528 tttctgcgattttctaccatgggagtctccttggctccgtttcttgaccctaaactctccaaaattgtccataatcatcaccatatgattaccctatcat 10627  T
Q  306 taaaacgttaacccatcactaacctacctgattaaccactcttttcaccattcaattctatggtt 370  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  10628 tagaacgttaatccatcactaacctacctgattaaccactcttttcaccgttaaattctatggtt 10692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 10429 - 10500
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||| ||  ||||||||||||||||| |||||    
T  10429 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcacaggaatcgcctcatgattttgacag 10500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 141; Significance: 1e-73; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 116812 - 116999
Alignment:
Q  19 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaa 118  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||    
T  116812 gacagcatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcaaacatactaaaa 116911  T
Q  119 ttacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttt 207  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  116912 ttacagattttt-tgtcgaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcagacatactaaaattacagatttt 116999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 116872 - 117042
Alignment:
Q  1 gaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgaca 100  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||    
T  116872 gaatcgcctcatgatttcgacagcatcaaacatactaaaattacagattttt-tgtcgaaatcgcctcatgatcactagaatcgcctcatgatttcgaca 116970  T
Q  101 gtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatca 184  Q
    | ||| ||||||||||||||||||| |||||||           ||||||| |||||||||||||||||||||||||| |||||    
T  116971 gcatcagacatactaaaattacaga-ttttctg-----------tcatgatcactagaatcgcctcatgatttcgacaacatca 117042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 116812 - 116923
Alignment:
Q  97 gacagtatctgacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaa 196  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| | |||    
T  116812 gacagcatcagacatactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcaaacatactaaaa 116911  T
Q  197 ttacagattttt 208  Q
    ||||||||||||    
T  116912 ttacagattttt 116923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 116812 - 116848
Alignment:
Q  175 gacagcatcagacatattgaaattacagatttttctg 211  Q
    |||||||||||||||| | ||||||||||||||||||    
T  116812 gacagcatcagacatactaaaattacagatttttctg 116848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 130; Significance: 4e-67; HSPs: 4)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 158 - 371
Target Start/End: Original strand, 8735 - 8948
Alignment:
Q  158 aatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggagcctccttggcttcaattctcaacccta 257  Q
    |||||||||| |||||||||| ||||| ||||  |||||| ||||||||||||||||||| |||| |||||||||||||||||| |  ||||  ||||||    
T  8735 aatcgcctcacgatttcgacatcatcatacatgctgaaatcacagatttttctgcgattttctacgatgggagcctccttggctccgtttcttgacccta 8834  T
Q  258 aactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacctacctgattaaccactcttttcaccatt 357  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| ||    
T  8835 aactctccaaaatcgtccataatcatcaccatatgattaccctatcatttaaacgttaatccatcgctaccctacctgattaaccactcttttcaccgtt 8934  T
Q  358 caattctatggttt 371  Q
    ||||||||||||||    
T  8935 caattctatggttt 8948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 6177 - 6266
Alignment:
Q  108 acatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaatt 198  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||| | ||||||||||||| |||||||||||||||| ||||  |||||||    
T  6177 acatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcagtagaatcgcctcacgatttcgacagcatcatacatgctgaaatt 6266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 6177 - 6247
Alignment:
Q  30 acatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||| | ||||||||||||| |||||||||||    
T  6177 acatactgaaattacagatttt-ctgtcaaaatcgcctcacgatcagtagaatcgcctcacgatttcgacag 6247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 8705 - 8749
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgatt 74  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||    
T  8705 gacatactgaaattacagatttt-ctgtcaaaatcgcctcacgatt 8749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 76; Significance: 7e-35; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 115 - 36
Alignment:
Q  107 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  115 gacatactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcaga 36  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 115 - 43
Alignment:
Q  29 gacatactaaaattacagatttttctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  115 gacatactaaaattacagatttttctgtcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacag 43  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 131 - 370
Target Start/End: Complemental strand, 4549 - 4310
Alignment:
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagacatattgaaattacagatttttctgcgatttcctaccatgggag 230  Q
    ||||||||||| ||||||||||  |  |||||||||||||||| |||||||||||||||   ||||| ||||||||||||||||||| | || ||| |||    
T  4549 ctgtcaaaatcacctcatgatttgtgaaatcgcctcatgattttgacagcatcagacatgcagaaatcacagatttttctgcgattttccactatgcgag 4450  T
Q  231 cctccttggcttcaattctcaaccctaaactctccaaaatcatccataaacatcaccatatgattaccctatcaataaaacgttaacccatcactaacct 330  Q
      |||||||||    || |||||||||||||| |||||||| ||| ||| ||||||| |||||||| ||||||| || |||  |||  | ||| |||||     
T  4449 gttccttggctatgtttttcaaccctaaactcaccaaaatcgtccctaatcatcaccgtatgattaacctatcattataaccgtaattcttcattaacca 4350  T
Q  331 acctgattaaccactcttttcaccattcaattctatggtt 370  Q
    ||| |||||  ||| | ||||||| || ||||||||||||    
T  4349 accggattattcacccctttcaccgtttaattctatggtt 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 4549 - 4469
Alignment:
Q  53 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagtatctgacatactaaaattacagatttttctg 133  Q
    ||||||||||| ||||||||||  |  |||||||||||||||| ||||| ||| ||||| |  |||| |||||||||||||    
T  4549 ctgtcaaaatcacctcatgatttgtgaaatcgcctcatgattttgacagcatcagacatgcagaaatcacagatttttctg 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 2140 - 2062
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  2140 caatttctaccagaaacatgttaaaccaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 2062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 26850 - 26919
Alignment:
Q  445 aaatcaaaatcagaatta-caatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    |||||||||||||||||| | ||||| |||||| || ||||| ||||||||||||||||||||||||||||    
T  26850 aaatcaaaatcagaattaaccatctacactattgaa-gtaaacctcacccttaccttagttttgcagaaaa 26919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 423 - 512
Target Start/End: Complemental strand, 80386 - 80296
Alignment:
Q  423 caatttctaccagaaacatgttaaa-tcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaa 512  Q
    |||||||||||||||  |||||||| ||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  80386 caatttctaccagaactatgttaaactcaaaatcagaattataatctatactattgaaagtaaacctcacccttaccttagttttgcagaa 80296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 423 - 512
Target Start/End: Complemental strand, 100108 - 100018
Alignment:
Q  423 caatttctaccagaaacatgttaaa-tcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaa 512  Q
    |||||| ||||||||  |||||||| ||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  100108 caatttttaccagaactatgttaaactcaaaatcagaattataatctatactattgaaagtaaacctcacccttaccttagttttgcagaa 100018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 13385 - 13463
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  13385 caatttctaccataaacctgttaaatcaaaatcagaattacaatctacactattgaaagcaaatctcacccttacctta 13463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 367 - 501
Target Start/End: Complemental strand, 6056 - 5920
Alignment:
Q  367 ggtttctacact-ttttc-attcaaaaaccaataatcaaaacctaatcccaagtttctcaatttcta-ccagaaacatgttaaatcaaaatcagaattac 463  Q
    |||||||||||| ||||| || ||||||| || ||||| ||||||| ||||| || | ||||||||| ||| |||||||||||| |||||||| ||||||    
T  6056 ggtttctacactcttttctatccaaaaacaaagaatcataacctaaacccaaattcc-caatttctaaccaaaaacatgttaaaccaaaatcaaaattac 5958  T
Q  464 aatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  5957 aatctatactattgaaagtaaacctcacccttacctta 5920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 423 - 500
Target Start/End: Original strand, 26391 - 26468
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctt 500  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||  |||||||||||||    
T  26391 caatttctaccagaaacatgttaaaccaaaatcagaattacaaactatactattgaaagtaaacgtcacccttacctt 26468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 23954 - 24032
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||| ||||||||||||||||||| |||||||||||||  ||||||||||||| |||||||| |||||||||||||||    
T  23954 caattcctaccagaaacatgttaaaccaaaatcagaattttaatctatactattgaaagtaaacctcacccttacctta 24032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 2874 - 2936
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaa 485  Q
    ||||| |||||| |||||||||||| |||||||||||||  ||||||||||||| ||||||||    
T  2874 caattcctaccataaacatgttaaaccaaaatcagaattttaatctatactattgaaagtaaa 2936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 431 - 501
Target Start/End: Original strand, 71524 - 71594
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  71524 accagaactatgttaaaccaaaatcagaattacaatctatactattgaaagtaaatctcacccttacctta 71594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 367 - 501
Target Start/End: Original strand, 21743 - 21878
Alignment:
Q  367 ggtttctacactttttc-attcaaaaaccaat-aatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattaca 464  Q
    |||||||||||| |||| || |||||| |||  ||||||||||||| ||||| |  |||||||||||||||||  ||||||||  ||||||||||||| |    
T  21743 ggtttctacactctttccatccaaaaatcaaagaatcaaaacctaaacccaaatc-ctcaatttctaccagaactatgttaaacaaaaatcagaattata 21841  T
Q  465 atctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| | |||||| |||||||||||||||    
T  21842 atctatactattgagagtaaacctcacccttacctta 21878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 514
Target Start/End: Original strand, 7563 - 7632
Alignment:
Q  445 aaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||||||||||||||   ||||| |||||| || ||||| |||||||||||| |||||||||||||||    
T  7563 aaatcaaaatcagaattaagcatctacactattgaa-gtaaacctcacccttaccgtagttttgcagaaaa 7632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2016 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 427 - 494
Target Start/End: Complemental strand, 68 - 1
Alignment:
Q  427 ttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcaccct 494  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||    
T  68 ttctaccagaaacatgttaaaccaaaatcagaattacaatctatactattgaaattaaacctcaccct 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 423 - 513
Target Start/End: Complemental strand, 4258 - 4167
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaa-tcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||  | |||||| ||||| ||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  4258 caatttctaccagaactaggttaaaccaaaaatcagaattaaaatccatactattgaaagtaaacctcacccttaccttagttttgcagaaa 4167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 551
Target Start/End: Original strand, 16860 - 16922
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttc 551  Q
    |||||||||||||||| ||   |||||||||||||||||||| | |||||||||||||||||||||    
T  16860 tctcacccttaccttaatt---cagaaaatcgcacgacacacggatgatcttggctctacttgttc 16922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 27255 - 27334
Alignment:
Q  423 caatttcta-ccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  27255 caatttctaaccaaaaacatgttaaaccaaaatcagaattacaatctatactattgaaagtaaacctcaccctcacctta 27334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 423 - 513
Target Start/End: Complemental strand, 16495 - 16405
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||  |  ||||| |||||| ||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  16495 caatttctaccagaactagcttaaaccaaaataagaattaaaatccatactattgaaagtaaacctcacccttaccttagttttgcagaaa 16405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 49; Significance: 9e-19; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 72221 - 72273
Alignment:
Q  134 tcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcaga 186  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  72221 tcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacagcatcaga 72273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 440 - 501
Target Start/End: Complemental strand, 124130 - 124069
Alignment:
Q  440 atgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  124130 atgttaaaccaaaatcagaattacaatctacactattgaaagtaaacctcacccttacctta 124069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 72221 - 72266
Alignment:
Q  56 tcaaaatcgcctcatgattactagaatcgcctcatgatttcgacag 101  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  72221 tcaaaatcgcctcatgatcactagaatcgcctcatgatttcgacag 72266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 431 - 501
Target Start/End: Complemental strand, 982 - 912
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||| |||||||||||| |||||||||||||| ||||||||||||| ||||||||  ||||||||||||||    
T  982 accaaaaacatgttaaaccaaaatcagaattataatctatactattgaaagtaaacatcacccttacctta 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 431 - 501
Target Start/End: Original strand, 18786 - 18856
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||| |||||||||||| |||||| ||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  18786 accaaaaacatgttaaaccaaaataagaattataatctatacaattgaaagtaaatctcacccttacctta 18856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 431 - 501
Target Start/End: Original strand, 501 - 570
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||| |||||||||||| |||||||||||||| ||||||||||||| ||||| || |||| ||||||||||    
T  501 accaaaaacatgttaaaccaaaatcagaattataatctatactattgaaagt-aacctcatccttacctta 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 512
Target Start/End: Complemental strand, 56456 - 56343
Alignment:
Q  398 aatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttac 497  Q
    ||||||||||||  ||||| || | |||||||||||||||  | |||||| |||||||| ||||| |||| |||||||| ||||||||  ||| ||||||    
T  56456 aatcaaaacctagacccaaattcc-caatttctaccagaactaggttaaaccaaaatcataattataatccatactattgaaagtaaacatcatccttac 56358  T
Q  498 cttagttttgcagaa 512  Q
    |||||||||||||||    
T  56357 cttagttttgcagaa 56343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 512
Target Start/End: Original strand, 142177 - 142290
Alignment:
Q  398 aatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttac 497  Q
    ||||||||||||  ||||| || | |||||||||||||||  | |||||| |||||||| ||||| |||| |||||||| ||||||||  ||| ||||||    
T  142177 aatcaaaacctagacccaaattcc-caatttctaccagaactaggttaaaccaaaatcataattataatccatactattgaaagtaaacatcatccttac 142275  T
Q  498 cttagttttgcagaa 512  Q
    |||||||||||||||    
T  142276 cttagttttgcagaa 142290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 17400 - 17322
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||| |||||| |||| ||| |||||||||||||||    
T  17400 caatttctaccataaacctgttaaacgaaaatcagaattacaatctacactattgaaagcaaacctcacccttacctta 17322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 431 - 498
Target Start/End: Complemental strand, 8438 - 8371
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacc 498  Q
    |||||||  |||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||||    
T  8438 accagaactatgttaaatcaaaatcagaattacaacctacactattgaaagtaaacctcacccttacc 8371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 3000 - 2922
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||| |||||||||||||| |||||| |||||| |||| ||| |||||||| ||||||    
T  3000 caatttctaccataaacctgttaaaccaaaatcagaattataatctacactattgaaagcaaacctcaccctcacctta 2922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 486 - 556
Target Start/End: Original strand, 13672 - 13739
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttcatctc 556  Q
    |||||||||||||||| ||   |||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  13672 tctcacccttaccttaatt---cagaaaatcgcacgacacacggttgatattggctctacttgttcttctc 13739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 416
Target Start/End: Original strand, 1047 - 1102
Alignment:
Q  361 ttctatggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  1047 ttctatggtttctacacttttcaattcaaaaatcaaaaatcaaaacctaatcccaa 1102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 7151 - 7100
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  7151 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 7100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 23859 - 23808
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  23859 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 23808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 18505 - 18556
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  18505 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 18556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 42583 - 42634
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  42583 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 42634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 39953 - 39902
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  39953 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 39902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Original strand, 330 - 359
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  330 tctcacccttaccttagttttgcagaaaat 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 169351 - 169402
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  169351 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 169402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 176704 - 176755
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  176704 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 176755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1913 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1913
Description:

Target: scaffold1913; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 502
Target Start/End: Original strand, 825 - 880
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||    
T  825 aatcaaaatcagaatt-caatctatactattgagagtaaacctcacccttaccttag 880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 514
Target Start/End: Original strand, 6475 - 6567
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    |||||||||||||||  | |||||| |||| |||||||| | |||| |||||||| |||||||| ||||||||||||||| ||| | ||||||    
T  6475 caatttctaccagaactaggttaaaccaaattcagaatttataatccatactattgaaagtaaacctcacccttaccttaatttagaagaaaa 6567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 2039 - 2087
Alignment:
Q  368 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  2039 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 2087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 556
Target Start/End: Complemental strand, 34291 - 34224
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaatcgcacgacacactgttgatcttggctctacttgttcatctc 556  Q
    |||||||||||||||| ||   ||| |||||||||||||||| | ||||||||||||||||||||| ||||    
T  34291 tctcacccttaccttattt---caggaaatcgcacgacacacgggtgatcttggctctacttgttcttctc 34224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 3875 - 3926
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  3875 atggtttctacacttttcaattcaaaaatcaataaccaaaacctaatcccaa 3926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 501
Target Start/End: Complemental strand, 1419 - 1365
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||||||| |||| |||||||||||||||| | |||||||||||||||    
T  1419 aatcaaaatcagaatt-caatatatactattaaaagtagacctcacccttacctta 1365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 501
Target Start/End: Complemental strand, 7722 - 7668
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||||||| |||||||||||||| | |||||| |||||||||||||||    
T  7722 aatcaaaatcagaatt-caatctatactattgagagtaaacctcacccttacctta 7668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 462
Target Start/End: Complemental strand, 4608 - 4569
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatta 462  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  4608 caatttctaccataaacatgttaaatcaaaatcagaatta 4569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 462
Target Start/End: Complemental strand, 19790 - 19751
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatta 462  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  19790 caatttctaccataaacatgttaaatcaaaatcagaatta 19751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 19440 - 19389
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  ||||||||| ||||||||||||| |||||||||    
T  19440 atggtttctacacttttcaattcaaaaatcaataatcaaaacttaatcccaa 19389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 10006 - 10057
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 416  Q
    |||||||||||||||||  | ||||||| |||||||||||||||||||||||    
T  10006 atggtttctacacttttcaactcaaaaatcaataatcaaaacctaatcccaa 10057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 21991 - 21913
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| |||||||||||||||||||||| | ||||| |||| |  ||||||| |||||||||||||||    
T  21991 caatttctaccataaacctgttaaatcaaaatcagaattaaacatctacactact-gaagtaaacctcacccttacctta 21913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 26188 - 26110
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| |||||||||||||||||||||| | ||||| |||| |  ||||||| |||||||||||||||    
T  26188 caatttctaccataaacctgttaaatcaaaatcagaattaaacatctacactact-gaagtaaacctcacccttacctta 26110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 501
Target Start/End: Complemental strand, 1263 - 1209
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  1263 aatcagaatcagaatt-caatctatactattgaaagtaaacctcacccttacctta 1209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 411
Target Start/End: Original strand, 32054 - 32100
Alignment:
Q  365 atggtttctacactttttcattcaaaaaccaataatcaaaacctaat 411  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  32054 atggtttctacacttttcaattcaaaaatcaataatcaaaacctaat 32100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 501
Target Start/End: Complemental strand, 42144 - 42074
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  |||||||| |||| ||||||||| |||||  |||||| |||||||| |||||||||||||||    
T  42144 accagaactatgttaaaccaaactcagaattataatctgcactattgaaagtaaacctcacccttacctta 42074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 501
Target Start/End: Complemental strand, 52839 - 52769
Alignment:
Q  431 accagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||  |||||||| |||| ||||||||| |||||  |||||| |||||||| |||||||||||||||    
T  52839 accagaactatgttaaaccaaactcagaattataatctgcactattgaaagtaaacctcacccttacctta 52769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 513
Target Start/End: Complemental strand, 1210 - 1141
Alignment:
Q  445 aaatcaaaatcagaatta-caatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    |||||||||||||||||| | ||||| |||||| ||  | || |||||||||||||||||||||||||||    
T  1210 aaatcaaaatcagaattaaccatctacactattgaagtttaaactcacccttaccttagttttgcagaaa 1141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 459 - 515
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||| |  ||||||||||||| | |||||| |||||||||||||||    
T  459 aaatcaaaatcagaactttaatctatactattgagagtaaacctcacccttacctta 515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 502
Target Start/End: Complemental strand, 5265 - 5210
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||||||| ||||||||||| || | |||||| ||||||||||||||||    
T  5265 aatcaaaatcagaatt-caatctatactcttgagagtaaacctcacccttaccttag 5210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 6238 - 6294
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||| |  ||||||||||||| | |||||| |||||||||||||||    
T  6238 aaatcaaaatcagaactttaatctatactattgagagtaaacctcacccttacctta 6294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 15663 - 15719
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||| |  ||||||||||||| | |||||| |||||||||||||||    
T  15663 aaatcaaaatcagaactttaatctatactattgagagtaaacctcacccttacctta 15719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 27278 - 27334
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||| |  ||||||||||||| | |||||| |||||||||||||||    
T  27278 aaatcaaaatcagaactttaatctatactattgagagtaaacctcacccttacctta 27334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 12733 - 12789
Alignment:
Q  131 ctgtcaaaatcgcctcatgattactagaatcgcctcatgatttcgacagcatcagac 187  Q
    ||||||||||||||||||||||  |  |||||| |||||||||||||| ||||||||    
T  12733 ctgtcaaaatcgcctcatgatttgtgaaatcgcttcatgatttcgacaacatcagac 12789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 10243 - 10187
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||||||||||||| |  ||||||||||||| | |||||| |||||||||||||||    
T  10243 aaatcaaaatcagaactttaatctatactattgagagtaaacctcacccttacctta 10187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 59671 - 59593
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||| ||||||||||||| | |||||| |||| |  ||||||| |||||||||||||||    
T  59671 caatttctaccataaacctgttaaaccaaaatcagaattaaaaatctacactact-gaagtaaacctcacccttacctta 59593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 486 - 408
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||| ||||||| |||||||||||||| | |||||||||| |  ||| ||| |||||||||||||||    
T  486 caatttctaccataaacctgttaaaccaaaatcagaattaaacatctatactact-gaagcaaacctcacccttacctta 408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 9467 - 9521
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||||||| |||||||||||||| | ||||||  ||||||||||||||    
T  9467 aatcaaaatcagaatt-caatctatactattgatagtaaacttcacccttacctta 9521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 513
Target Start/End: Original strand, 9164 - 9257
Alignment:
Q  420 tctcaatttctaccagaaacatgttaaa-tcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||| ||||||| |||| ||||||| |||||||||||||| | |||| |||| ||| || ||||| |||||||||||||||| ||||||||||    
T  9164 tctcaatctctacca-aaacctgttaaactcaaaatcagaattcagaatcaatacaattgaa-gtaaacctcacccttaccttagatttgcagaaa 9257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 501
Target Start/End: Original strand, 20193 - 20243
Alignment:
Q  450 aaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||||| |||||||||||||| | ||| ||||||||||||||||||    
T  20193 aaaatcagaatt-caatctatactattgagagtgaatctcacccttacctta 20243  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 206949 - 206871
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||| |||||| |||||||||||||||||||||||||| |  |||||||||| |  ||| ||| |||||||||||||||    
T  206949 caattcctaccataaacatgttaaatcaaaatcagaattcaacatctatactact-gaagcaaacctcacccttacctta 206871  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 514
Target Start/End: Original strand, 371392 - 371427
Alignment:
Q  479 aagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    ||||||| ||||||||||||||||||||||||||||    
T  371392 aagtaaacctcacccttaccttagttttgcagaaaa 371427  T

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Target: scaffold0363 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 502
Target Start/End: Original strand, 2944 - 2997
Alignment:
Q  448 tcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||||||  |||||||||| | || ||||||||||||||||||||||    
T  2944 tcaaaatcagaattagcatctatactactgaa-gtaaatctcacccttaccttag 2997  T

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Target: scaffold0243 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 514
Target Start/End: Complemental strand, 11529 - 11460
Alignment:
Q  445 aaatcaaaatcagaattaca-atctatactattaaaagtaaatctcacccttaccttagttttgcagaaaa 514  Q
    |||||||||||||||||  | || ||||||||| || | ||| ||||||||||||||||||||||||||||    
T  11529 aaatcaaaatcagaattcaatatttatactattgaa-gcaaacctcacccttaccttagttttgcagaaaa 11460  T

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Target: scaffold0108 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 46463 - 46540
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    ||||| |||||| |||| | ||||| ||||||||||||||  |||||||||| |  ||||||| |||||||||||||||    
T  46463 caattcctaccataaacctattaaaccaaaatcagaattaatatctatactact-gaagtaaacctcacccttacctta 46540  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 462
Target Start/End: Original strand, 13769 - 13807
Alignment:
Q  424 aatttctaccagaaacatgttaaatcaaaatcagaatta 462  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  13769 aatttctaccataaacctgttaaatcaaaatcagaatta 13807  T

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Target: scaffold0924 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Complemental strand, 766 - 737
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  766 tctcacccttaccttagttttgcagaaaat 737  T

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Target: scaffold0924; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 461
Target Start/End: Original strand, 3166 - 3238
Alignment:
Q  388 aaaaaccaataatcaaaacctaatcccaagtttctcaatttctaccagaaacatgttaaatcaaaatcagaatt 461  Q
    |||||||||||||| || | ||| |||||  ||| ||||||||||||  ||| |||||||||||||||||||||    
T  3166 aaaaaccaataatccaa-cataaacccaaaattcccaatttctaccaataacctgttaaatcaaaatcagaatt 3238  T

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Target: scaffold0706 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 513
Target Start/End: Complemental strand, 2570 - 2502
Alignment:
Q  445 aaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaaa 513  Q
    ||||||||||||||||| | |||||| || ||| || ||||| ||||||||||||||||||||| |||||    
T  2570 aaatcaaaatcagaattcagaatctacacaattgaa-gtaaacctcacccttaccttagttttgtagaaa 2502  T

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Target: scaffold0555 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 462
Target Start/End: Original strand, 2333 - 2374
Alignment:
Q  421 ctcaatttctaccagaaacatgttaaatcaaaatcagaatta 462  Q
    |||||||||||||| |||| ||||||| ||||||||||||||    
T  2333 ctcaatttctaccataaacctgttaaaccaaaatcagaatta 2374  T

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Target: scaffold0069 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 502
Target Start/End: Original strand, 35499 - 35560
Alignment:
Q  441 tgttaaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||||||| ||||| ||||||||  ||| | ||| || ||||||||||||||||    
T  35499 tgttaaatcaaaatcaaaattataatctatatcattgagagttaacctcacccttaccttag 35560  T

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Target: scaffold0067 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 55812 - 55736
Alignment:
Q  436 aaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaa 512  Q
    |||| ||||||||| ||||||||||| | ||||||||  |||  || |||| ||||||||||||||||||||||||||    
T  55812 aaacctgttaaatccaaatcagaattcagaatctatatgattgcaa-taaacctcacccttaccttagttttgcagaa 55736  T

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Target: scaffold0067; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 62198 - 62122
Alignment:
Q  436 aaacatgttaaatcaaaatcagaatt-acaatctatactattaaaagtaaatctcacccttaccttagttttgcagaa 512  Q
    |||| ||||||||| ||||||||||| | ||||||||  |||  || |||| ||||||||||||||||||||||||||    
T  62198 aaacctgttaaatccaaatcagaattcagaatctatatgattgcaa-taaacctcacccttaccttagttttgcagaa 62122  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 515
Target Start/End: Original strand, 111922 - 111951
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaat 515  Q
    ||||||||||||||||||||||||||||||    
T  111922 tctcacccttaccttagttttgcagaaaat 111951  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 556
Target Start/End: Complemental strand, 101943 - 101875
Alignment:
Q  486 tctcacccttaccttagttttgcagaaaatcgcacgacacactgttga-tcttggctctacttgttcatctc 556  Q
    |||||||||||||||| ||   ||||||||||||||||||||   ||| |||||||||||||||||| ||||    
T  101943 tctcacccttaccttaatt---cagaaaatcgcacgacacacaaatgattcttggctctacttgttcttctc 101875  T

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Target: scaffold1853 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 474
Target Start/End: Complemental strand, 69 - 17
Alignment:
Q  423 caatttctaccagaaacatgttaaatcaaaatcagaatt-acaatctatacta 474  Q
    |||||||||||| |||| ||||||| ||||||||||||| | |||||||||||    
T  69 caatttctaccataaacctgttaaaccaaaatcagaattaaaaatctatacta 17  T

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Target: scaffold0371 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 6197 - 6141
Alignment:
Q  445 aaatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttacctta 501  Q
    |||||||||| |||| |  ||||||||||||| | |||||| |||||||||||||||    
T  6197 aaatcaaaattagaactttaatctatactattgagagtaaacctcacccttacctta 6141  T

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Target: scaffold0239 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 480 - 512
Target Start/End: Complemental strand, 13660 - 13628
Alignment:
Q  480 agtaaatctcacccttaccttagttttgcagaa 512  Q
    |||||| ||||||||||||||||||||||||||    
T  13660 agtaaacctcacccttaccttagttttgcagaa 13628  T

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Target: scaffold0160 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 502
Target Start/End: Original strand, 15846 - 15900
Alignment:
Q  446 aatcaaaatcagaattacaatctatactattaaaagtaaatctcacccttaccttag 502  Q
    |||||||||||||||| |||||||||||||| | ||| || ||||||||||||||||    
T  15846 aatcaaaatcagaatt-caatctatactattgagagt-aacctcacccttaccttag 15900  T

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