View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11033_high_18 (Length: 342)
Name: NF11033_high_18
Description: NF11033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11033_high_18 |
 |  |
|
| [»] chr7 (14 HSPs) |
 |  |
|
| [»] chr4 (1 HSPs) |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 19 - 342
Target Start/End: Original strand, 4711399 - 4711722
Alignment:
| Q |
19 |
cgtatctctctctcaaatttcacatactcattttctagcataactaacacccctgtttttattagccttcatttttacccaacttcataccaaaactttg |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4711399 |
cgtatctctctctcaaatttcacatactcattttctagcatcactaacacccctgtttttattagccttcatttttacccaacttcataccaaaactttg |
4711498 |
T |
 |
| Q |
119 |
atccctccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaacttcagcccttattatgagaaggaaaaaatcaccaaagaata |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4711499 |
atccctccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaacttcagcccttattatgagaaggaaaaaatcaccaaagaata |
4711598 |
T |
 |
| Q |
219 |
ttgcattcaaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatccttattatgctttcattaacggaatcgaa |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4711599 |
ttgcattcaaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatccttattatgctttcattaacggaatcgaa |
4711698 |
T |
 |
| Q |
319 |
attgtgtctatgccttcttctctc |
342 |
Q |
| |
|
||||||||||||||||||| |||| |
|
|
| T |
4711699 |
attgtgtctatgccttcttttctc |
4711722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 21 - 342
Target Start/End: Original strand, 4845329 - 4845662
Alignment:
| Q |
21 |
tatctctctctcaaatttcacatactcattttctagcataactaacacccctgtttttattagccttcatttttacccaacttcataccaaaactttgat |
120 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4845329 |
tatctctttctcaaatttcacatactcattttctagcattcctagttcccctgtttttattcgccttcatttttacccaacttcataccagaactttgat |
4845428 |
T |
 |
| Q |
121 |
ccctccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaacttcagccctt------------attatgagaaggaaaaaatca |
208 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || | ||| ||||||||| | |
|
|
| T |
4845429 |
ccctccaatgctcttttctctgtcgaagtaaacaacaatcttacccttcttaaaaacttcagcccttcactttggcttcatgacgaggtggaaaaaatta |
4845528 |
T |
 |
| Q |
209 |
ccaaagaatattgcattcaaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatccttattatgctttcattaa |
308 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||| ||||||||||| | | ||||||| |||||||||| |||| |
|
|
| T |
4845529 |
ccaaagaatattgcattcagatcaaaccaaatgggaagctaaacataactttctttccgaacaacataaacgaattgaatcctttttatgctttcgttaa |
4845628 |
T |
 |
| Q |
309 |
cggaatcgaaattgtgtctatgccttcttctctc |
342 |
Q |
| |
|
|||||||||| ||||||| |||||||||| |||| |
|
|
| T |
4845629 |
cggaatcgaagttgtgtcgatgccttcttttctc |
4845662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 17 - 342
Target Start/End: Complemental strand, 4654278 - 4653941
Alignment:
| Q |
17 |
cacgtatctctctctcaaatttcacatactcattttctagcataactaacacccctgtttttattagccttcatttttacccaacttcataccaaaactt |
116 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| ||| |||| |||||||||||| |||||||||||||||| ||||| || ||||| || |
|
|
| T |
4654278 |
cacgtatctctctctcatatttcacatactcattttctaacatcactacttcccctgtttttaaccgccttcatttttaccctacttcgtatcaaaaatt |
4654179 |
T |
 |
| Q |
117 |
tgatccctccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaacttcagccctt------------attatgagaaggaaaaa |
204 |
Q |
| |
|
||| ||||| ||||| ||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| || |||| ||||| | |
|
|
| T |
4654178 |
tgaaccctcaaatgcacttttctctgttgaagtaaacaacaaacttacacttcttaaaaacttcaatccttcactttggattcatgatgatggggaaaca |
4654079 |
T |
 |
| Q |
205 |
atcaccaaagaatattgcattcaaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatccttattatgctttca |
304 |
Q |
| |
|
|||||||||||||||||||| ||| || |||| ||| ||||||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
4654078 |
atcaccaaagaatattgcatccaagtccaaccgaataagaagctaaacataactttcattcccaacaacacaaaccattcaaatccttattatgctttca |
4653979 |
T |
 |
| Q |
305 |
ttaacggaatcgaaattgtgtctatgccttcttctctc |
342 |
Q |
| |
|
|||| ||||| ||| |||||||||||||||||| |||| |
|
|
| T |
4653978 |
ttaatggaattgaagttgtgtctatgccttcttttctc |
4653941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 17 - 342
Target Start/End: Original strand, 4696491 - 4696840
Alignment:
| Q |
17 |
cacgtatctctctctcaaatttcacatactcattttctagcataactaacacccctgtttttattagccttcatttttacccaacttcataccaaaactt |
116 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||| ||||||| |||| ||||||||||| || |||||||||||||||| ||||| |||| |||||| |
|
|
| T |
4696491 |
cacgtgtctctctctcaaatttcacatactcttttcctagcatcactacttcccctgtttttcttcgccttcatttttacccgacttcgtaccgaaactt |
4696590 |
T |
 |
| Q |
117 |
tga----------tccct--ccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaacttcagccctt------------attat |
192 |
Q |
| |
|
||| ||||| | ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| || || |
|
|
| T |
4696591 |
tgaaccttctaattccctttcaaatgcacttttctctgttaaagtaaacaacaacgttacccttcttaaaaacttcaacccttctctttggttctatcat |
4696690 |
T |
 |
| Q |
193 |
gagaaggaaaaaatcaccaaagaatattgcattcaaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatcctt |
292 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||| | ||||||||| || |||||||||| |
|
|
| T |
4696691 |
gatgacgaaaaaatcaccaaagaatattgcattcaaaccaaaccaaatgagaagttaaacataactttcattcccagcaacataaaccagtcaaatcctt |
4696790 |
T |
 |
| Q |
293 |
attatgctttcattaacggaatcgaaattgtgtctatgccttcttctctc |
342 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||| |||||||||| |||| |
|
|
| T |
4696791 |
attatgctttcattaacggaatagaagttgtgtcaatgccttcttttctc |
4696840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 25 - 342
Target Start/End: Complemental strand, 4637628 - 4637302
Alignment:
| Q |
25 |
tctctctcaaatttcacatactcattttctagcataactaacacccctgtttttattagccttcatttttacccaacttcataccaaaactttgatccct |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| || |||||||| || | |||||||||||||| || || || ||||||||||| || | |
|
|
| T |
4637628 |
tctctctcaaatttcacatactcattttctagcatcactaattccactgtttttcttcgtcttcatttttaccctacatcttatcaaaactttgaacctt |
4637529 |
T |
 |
| Q |
125 |
ccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaacttcagccctt------------attatgagaaggaaaaaatcaccaa |
212 |
Q |
| |
|
||| ||| |||||||||||||||| ||| || |||||||||||||||||||||| ||||| ||| ||| | |||||||||||||| |
|
|
| T |
4637528 |
ccagtgcaattttctctgtcaaagtgaacgac---cttacccttcttaaaaacttcaaccctttgctttggctctattttgatgacgaaaaaatcaccaa |
4637432 |
T |
 |
| Q |
213 |
agaatattgcattcaaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatccttattatgctttcattaacgga |
312 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||| |||| |||||| || |||||||||| ||||||||| |||||||| |
|
|
| T |
4637431 |
agaatattgcatacaaatcaaaccaaatgaaaagttaaacataactttcattcctaacagcataaaccaatcaaatccttgttatgcttttattaacggg |
4637332 |
T |
 |
| Q |
313 |
atcgaaattgtgtctatgccttcttctctc |
342 |
Q |
| |
|
|||||| ||||||| |||||||||| |||| |
|
|
| T |
4637331 |
atcgaagttgtgtcaatgccttcttttctc |
4637302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 25 - 342
Target Start/End: Complemental strand, 4673477 - 4673148
Alignment:
| Q |
25 |
tctctctcaaatttcacatactcattttctagcataactaacacccctgtttttattagccttcatttttacccaacttcataccaaaactttgatccct |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| || |||||||| || |||||||||||||||||| || || ||| ||||||||||| |
|
|
| T |
4673477 |
tctctctcaaatttcacatactcattttctagcatcactaattccactgtttttcttcgccttcatttttacccaaatttatctaaaagctttgatccct |
4673378 |
T |
 |
| Q |
125 |
ccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaacttcagccctt------------attatgagaaggaaaaaatcaccaa |
212 |
Q |
| |
|
||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||| || || | |||||| ||||||||| |
|
|
| T |
4673377 |
ccaatgcaattttctctatcaaagttaacaacaatattacccttcttaaaaacttcaaccctttcctttggattcatgattatgaggaaacaatcaccaa |
4673278 |
T |
 |
| Q |
213 |
agaatattgcattcaaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatccttattatgctttcattaacgga |
312 |
Q |
| |
|
||||| ||| || |||||||| || ||||||||||||| ||||| ||||||||||| || ||| || | |||||| | | |||||||||||||||||| |
|
|
| T |
4673277 |
agaattttgtatccaaatcaagcccaatgagaagctaaacataaatttcattccaagcatcatgaacaaatcaaatgttaaatatgctttcattaacgga |
4673178 |
T |
 |
| Q |
313 |
atcgaaattgtgtctatgccttcttctctc |
342 |
Q |
| |
|
|||||||||||||| |||||||||| |||| |
|
|
| T |
4673177 |
atcgaaattgtgtcaatgccttcttttctc |
4673148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 337
Target Start/End: Complemental strand, 4864705 - 4864372
Alignment:
| Q |
19 |
cgtatctctctctcaaatttcacatactcattttctagcataactaacacccctgtttttattagccttcatttttacccaacttcataccaaaactttg |
118 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||| ||| |||| | ||||||||| || | ||||||||||||||||| || || |||||||||| |
|
|
| T |
4864705 |
cgtatctctctctcaagtttcacatattcattttctaccatcactagttcgcctgtttttgttcgtcttcatttttacccaacatcttatcaaaactttg |
4864606 |
T |
 |
| Q |
119 |
atccctccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaacttcagccctt--------att-atgagaa---ggaaaaaat |
206 |
Q |
| |
|
| || || || || |||| || || ||||||||||||| ||||||||||||||||||||| ||||| ||| |||| | ||||||||| |
|
|
| T |
4864605 |
aaccttcgaaagcatttttttcagttgaagtaaacaacaaaattacccttcttaaaaacttcaacccttcactttggattcatgaagatggggaaaaaat |
4864506 |
T |
 |
| Q |
207 |
caccaaagaatattgcattcaaatcaaaccaaatgagaagctaagcataactttcattcca---aacaacataaatcattcaaatccttattatgctttc |
303 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || || |||||||| ||||||||||||||||| ||| |
|
|
| T |
4864505 |
caccaaagaatattgcattcaaatcaaatcaaatgagaagctaaacataactttcattccggccaataatataaatcaatcaaatccttattatgccttc |
4864406 |
T |
 |
| Q |
304 |
attaacggaatcgaaattgtgtctatgccttctt |
337 |
Q |
| |
|
||||| ||||| ||| | |||||||||||||||| |
|
|
| T |
4864405 |
attaatggaatagaagtcgtgtctatgccttctt |
4864372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 24 - 342
Target Start/End: Original strand, 4783152 - 4783485
Alignment:
| Q |
24 |
ctctctctcaaatttcacatactcattttctagcataa---ctaacacccctgtttttattagccttcatttttacccaacttcataccaaaactttgat |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| | ||||| || || ||||| || ||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
4783152 |
ctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttgaa |
4783251 |
T |
 |
| Q |
121 |
ccctccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaacttcagccctt------------attatgagaaggaaaaaatca |
208 |
Q |
| |
|
|||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| || |||| || | | ||| |
|
|
| T |
4783252 |
acctcttatgcacttttctctgttgaagtaaacaacaacattacccttcttaaaaacttcaacccttcactttggcttcatcatgatgagaatcatatcg |
4783351 |
T |
 |
| Q |
209 |
ccaaagaatattgcattcaaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatccttattatgctttcattaa |
308 |
Q |
| |
|
||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||| ||||||| ||| || | | |||| ||||||||||||||| |
|
|
| T |
4783352 |
tcaaagaatattccatccaaatcaaaccaaacgagaagctaaacataactttcattcccaacaacacaaaccaattgattcctagttatgctttcattaa |
4783451 |
T |
 |
| Q |
309 |
cggaatcgaaattgtgtctatgccttcttctctc |
342 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||| |
|
|
| T |
4783452 |
cggaatcgaagttgtgtctatgccttcttttctc |
4783485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 24 - 342
Target Start/End: Original strand, 4815581 - 4815914
Alignment:
| Q |
24 |
ctctctctcaaatttcacatactcattttctagcataa---ctaacacccctgtttttattagccttcatttttacccaacttcataccaaaactttgat |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| | ||||| || || ||||| || ||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
4815581 |
ctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttgaa |
4815680 |
T |
 |
| Q |
121 |
ccctccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaacttcagccctt------------attatgagaaggaaaaaatca |
208 |
Q |
| |
|
|||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| || |||| || | | ||| |
|
|
| T |
4815681 |
acctcttatgcacttttctctgttgaagtaaacaacaacattacccttcttaaaaacttcaacccttcactttggcttcatcatgatgagaatcatatcg |
4815780 |
T |
 |
| Q |
209 |
ccaaagaatattgcattcaaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatccttattatgctttcattaa |
308 |
Q |
| |
|
||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||| ||||||| ||| || | | |||| ||||||||||||||| |
|
|
| T |
4815781 |
tcaaagaatattccatccaaatcaaaccaaacgagaagctaaacataactttcattcccaacaacacaaaccaattgagtcctagttatgctttcattaa |
4815880 |
T |
 |
| Q |
309 |
cggaatcgaaattgtgtctatgccttcttctctc |
342 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||| |
|
|
| T |
4815881 |
cggaatcgaagttgtgtctatgccttcttttctc |
4815914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 342
Target Start/End: Complemental strand, 4644477 - 4644152
Alignment:
| Q |
17 |
cacgtatctctctctcaaatttcacatactcattttctagcataactaacacccctgtttttattagccttcatttttacccaacttcataccaaaactt |
116 |
Q |
| |
|
||||| ||||| |||||||||| |||||||||||||||||||| ||| ||||||||||| || ||||| |||||||||| | || || ||||| || |
|
|
| T |
4644477 |
cacgtgtctctttctcaaattttacatactcattttctagcatcactgtttcccctgtttttcttcgcctttatttttaccctgcatcgtatcaaaattt |
4644378 |
T |
 |
| Q |
117 |
tgatccctccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaacttcagccctt------------attatgagaaggaaaaa |
204 |
Q |
| |
|
||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| || |||| || | || |
|
|
| T |
4644377 |
tgaaccctcaaatgcacttttctctgtcaaagtaaacaacaatctcacccttcttcaaaacttcaacccttcactttggcttcatcatgatgagaataat |
4644278 |
T |
 |
| Q |
205 |
atcaccaaagaatattgcattcaaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatccttattatgctttca |
304 |
Q |
| |
|
|||| |||||| |||||||| ||||| ||| ||||||||||||||| ||||||||||||||| ||| |||||| | ||||||||||| |
|
|
| T |
4644277 |
atcatcaaagagtattgcatccaaattaaaacaaatgagaagctaaacataactttcattcc-caca-----------tcaaatgttagttatgctttca |
4644190 |
T |
 |
| Q |
305 |
ttaacggaatcgaaattgtgtctatgccttcttctctc |
342 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
4644189 |
ttaacggaatcgaagttgtgtctatgccttcttttctc |
4644152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 4663472 - 4663310
Alignment:
| Q |
17 |
cacgtatctctctctcaaatttcacatactcattttctagcataactaacacccctgtttttattagccttcatttttacccaacttcataccaaaactt |
116 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||| ||| ||| |||||||||| || |||||||||||||| |||| || || ||||||| |
|
|
| T |
4663472 |
cacgtatctcgctctcaaatttcacatactcatttcctaccatccctagttgccctgtttttcttcgccttcatttttactcaacatcttataaaaactt |
4663373 |
T |
 |
| Q |
117 |
tgatccctccaatgctcttttctctgtcaaagtaaacaacaatcttacccttcttaaaaactt |
179 |
Q |
| |
|
||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
4663372 |
tgaaccctccaatgcacttttctctgtcaaactaaacgacaatcttacccttcttaaaaactt |
4663310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 4631513 - 4631451
Alignment:
| Q |
204 |
aatcaccaaagaatattgcattcaaatcaaaccaaatgagaagctaagcataactttcattcc |
266 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
4631513 |
aatcaccaaagaatattgcatacaaattgctccaaatgagaagctaaacataactttcattcc |
4631451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 4667668 - 4667550
Alignment:
| Q |
69 |
ccctgtttttattagccttcatttttacccaacttcataccaaaactttgatccctccaatgctcttttctctgtcaaagtaaacaacaatcttaccctt |
168 |
Q |
| |
|
|||||||||| || |||| |||||||||||||| || || ||||||||||| ||||||| ||||| ||| | ||||||||| | ||| ||||||||| |
|
|
| T |
4667668 |
ccctgtttttcttcgcctccatttttacccaacatcgtatcaaaactttgaaacctccaacgctctcttcacagtcaaagtaggaaccaaccttaccctt |
4667569 |
T |
 |
| Q |
169 |
cttaaaaacttcagccctt |
187 |
Q |
| |
|
|| ||| |||| ||||||| |
|
|
| T |
4667568 |
ctcaaagactttagccctt |
4667550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 4631416 - 4631372
Alignment:
| Q |
298 |
gctttcattaacggaatcgaaattgtgtctatgccttcttctctc |
342 |
Q |
| |
|
|||||||| |||||||| || ||||||||||||||||||| |||| |
|
|
| T |
4631416 |
gctttcatcaacggaattgagattgtgtctatgccttcttttctc |
4631372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 342
Target Start/End: Original strand, 18925280 - 18925392
Alignment:
| Q |
227 |
aaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatccttattatgctttcattaacggaatcgaaattgtgtc |
326 |
Q |
| |
|
|||| ||||||| ||||||| ||| ||||||||||||||||||| ||||||||| |||| | |||||||||||| |||||||| || || ||||| |
|
|
| T |
18925280 |
aaatgaaaccaactgagaagttaaatataactttcattccaaacaccataaatcaaccaaaggc---ttatgctttcatcaacggaattgagatcgtgtc |
18925376 |
T |
 |
| Q |
327 |
tatgccttcttctctc |
342 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
18925377 |
catgccttcttttctc |
18925392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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