View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11033_high_28 (Length: 257)
Name: NF11033_high_28
Description: NF11033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11033_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 11477756 - 11477518
Alignment:
| Q |
1 |
tacaccgctagagatggtatacgtaggaaaaagcaacaagcgagatcaagtacaaaaagtatgcgacactataatccgcgaaaagctctacactcacagt |
100 |
Q |
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| T |
11477756 |
tacacctctagagatggtatacgtaggaaaaagcaacaagcgagatcaagtacaaaaagtatgcgacactataatccgcgaaaagctctacactcacagc |
11477657 |
T |
|
| Q |
101 |
tggtcagaacaaagcatgatatggttcttctggacacgtctccaaagcatgcttttctccaaaatccaactgaaacaagtcgatgacaacgaccttgtga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
11477656 |
tggtcagaacaaagcatgatatggttcttctggacacgtctccaaagcatgctcttctccaaaatccaactgaaacaagtcgatgacaacgaccgtgtga |
11477557 |
T |
|
| Q |
201 |
tgcaagaaatcaaaaaacttcttagctatgacaaacaag |
239 |
Q |
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||||||||||||| || || |||||||| |||||||||| |
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| T |
11477556 |
tgcaagaaatcaagaagctccttagctacgacaaacaag |
11477518 |
T |
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