View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11033_high_42 (Length: 205)
Name: NF11033_high_42
Description: NF11033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11033_high_42 |
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Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 10119520 - 10119691
Alignment:
| Q |
29 |
ctcaaaattcaatttttcgtatatacactattatttttgcgatttcgcacattttgataaataaatagaaaatcaagacaaaggcgtgattgcttttatt |
128 |
Q |
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| T |
10119520 |
ctcaaaattcaaattttcgtatatacactattatttttgcgattttgcacattttgataaatgaatagaaaatcaagacaaaggcgtgattggttttatt |
10119619 |
T |
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| Q |
129 |
gaataatggtgttaaatatatggttcctgtttagggtaggctctgaaaaatgtggtgccatatagggcaact |
200 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10119620 |
aaataatggcgttaaatatatggttcctgtttagggtaggctctgaaaaatgtggtgccatatagggcaact |
10119691 |
T |
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