View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11035_high_3 (Length: 464)
Name: NF11035_high_3
Description: NF11035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11035_high_3 |
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Alignment Details
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 191 - 434
Target Start/End: Original strand, 33102969 - 33103212
Alignment:
| Q |
191 |
tattttgttgtgagtcatgttattttaacatgatatgtggttattgtgcagtctttggcttataacagaacaaaaagcaaaacagatactccccgattag |
290 |
Q |
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| T |
33102969 |
tattttattgtgagtcatgttattttaacatgatatgaggtcattgtgcagtctttggcttataacagaacaaaaagcaaaacagatactccccgattag |
33103068 |
T |
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| Q |
291 |
gccaaacggtttttctttgcaatccgcatggcatgatatgcatatctatacggtaaccaaacatgtcatgtccttcatatgttcatcacatacaataatg |
390 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33103069 |
gccaaacggtttttctttgcaatccgcatggcatgatatgcatatctatacggtaaccaaacatgtcatgtccttcatatgttcatcacatacaataatg |
33103168 |
T |
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| Q |
391 |
tacacacaaataattaattattccaatcattactcattaattgt |
434 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33103169 |
tacacacaaataattaattattccaatcattactcattaattgt |
33103212 |
T |
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