View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11035_low_13 (Length: 247)
Name: NF11035_low_13
Description: NF11035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11035_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 16961701 - 16961935
Alignment:
| Q |
1 |
gttgcagaaatctgtggtgctgcttaaggtttttagtgatgaagggtagccaagaatttcttgaagtttgtaaagtgtttgagactgagaaaattgtaac |
100 |
Q |
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| T |
16961701 |
gttgcagaaatctgtggtgctgcttaatgtttttagtgatgaagggtagccaagaatttcttgaagtttgtaaagtgtttgagactgagaaaattgtaac |
16961800 |
T |
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| Q |
101 |
tgttgtgagagatgaatggtggaaaggaagaagatgaagaggagtaggtgttgtgaatgtggaaatggttttgccattatttcttcaagtggagaaaaaa |
200 |
Q |
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| T |
16961801 |
tgttgtgagagatgaatggtggaaaggaagaagatgaagaggagtaggtgttgtgaatgtggaaatggttttgccattatttcttcaagtggagaaaaaa |
16961900 |
T |
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| Q |
201 |
gatagagttggataaataagtacactacacaggtt |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
16961901 |
gatagagttggataaataagtacactacacaggtt |
16961935 |
T |
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