View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11036_high_12 (Length: 567)

Name: NF11036_high_12
Description: NF11036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11036_high_12
NF11036_high_12
[»] chr2 (35 HSPs)
chr2 (19-321)||(9669772-9670074)
chr2 (337-464)||(45080591-45080718)
chr2 (337-464)||(2110220-2110347)
chr2 (337-464)||(43370674-43370801)
chr2 (333-461)||(29193984-29194112)
chr2 (337-464)||(4828262-4828389)
chr2 (339-464)||(28585856-28585981)
chr2 (362-459)||(8381494-8381591)
chr2 (462-559)||(2110380-2110477)
chr2 (462-559)||(28585726-28585823)
chr2 (462-559)||(29194148-29194245)
chr2 (337-464)||(1779245-1779372)
chr2 (337-444)||(31922032-31922139)
chr2 (337-456)||(42847088-42847207)
chr2 (462-559)||(4828132-4828229)
chr2 (462-559)||(43370834-43370931)
chr2 (334-464)||(16964810-16964943)
chr2 (462-559)||(8381359-8381456)
chr2 (372-460)||(39646503-39646591)
chr2 (337-444)||(25898463-25898570)
chr2 (462-556)||(1779118-1779212)
chr2 (462-559)||(45080463-45080558)
chr2 (462-559)||(9370534-9370631)
chr2 (482-559)||(31921664-31921741)
chr2 (462-554)||(43377256-43377346)
chr2 (498-559)||(30422588-30422649)
chr2 (462-527)||(42846984-42847047)
chr2 (335-370)||(29194255-29194290)
chr2 (482-558)||(39646348-39646426)
chr2 (306-340)||(9670075-9670109)
chr2 (462-559)||(16970316-16970411)
chr2 (337-366)||(42038523-42038552)
chr2 (337-370)||(43370941-43370974)
chr2 (337-370)||(45080420-45080453)
chr2 (487-559)||(25898766-25898838)
[»] chr4 (42 HSPs)
chr4 (335-559)||(51744562-51744786)
chr4 (337-464)||(40071622-40071749)
chr4 (334-464)||(54438330-54438460)
chr4 (337-464)||(925309-925436)
chr4 (337-464)||(17493753-17493880)
chr4 (334-460)||(34408834-34408960)
chr4 (340-460)||(37064930-37065050)
chr4 (337-464)||(39787992-39788120)
chr4 (344-464)||(47199493-47199613)
chr4 (337-464)||(20789673-20789800)
chr4 (337-464)||(21240326-21240453)
chr4 (462-559)||(39788153-39788250)
chr4 (360-459)||(3172197-3172296)
chr4 (335-464)||(32218110-32218239)
chr4 (462-559)||(40071492-40071589)
chr4 (463-559)||(17493914-17494010)
chr4 (344-464)||(46870614-46870734)
chr4 (462-556)||(37064799-37064893)
chr4 (462-559)||(20789833-20789929)
chr4 (462-555)||(54438204-54438297)
chr4 (337-444)||(10441143-10441251)
chr4 (366-464)||(33800956-33801053)
chr4 (462-559)||(925179-925276)
chr4 (462-559)||(33800826-33800923)
chr4 (462-559)||(47199646-47199743)
chr4 (337-459)||(41555462-41555584)
chr4 (462-559)||(34408700-34408797)
chr4 (462-559)||(32217980-32218077)
chr4 (342-458)||(28910335-28910452)
chr4 (372-464)||(53509815-53509907)
chr4 (397-464)||(52101108-52101175)
chr4 (461-559)||(52101207-52101305)
chr4 (462-559)||(21240486-21240583)
chr4 (342-444)||(28690088-28690189)
chr4 (462-554)||(53509690-53509782)
chr4 (462-556)||(28910204-28910296)
chr4 (462-559)||(3172063-3172159)
chr4 (337-370)||(54438157-54438190)
chr4 (462-537)||(46870767-46870840)
chr4 (337-370)||(17494020-17494053)
chr4 (337-370)||(34408657-34408690)
chr4 (337-370)||(40071449-40071482)
[»] scaffold0318 (3 HSPs)
scaffold0318 (331-464)||(16351-16484)
scaffold0318 (462-559)||(16517-16601)
scaffold0318 (334-370)||(16611-16647)
[»] chr7 (35 HSPs)
chr7 (337-464)||(40232288-40232415)
chr7 (336-464)||(29737404-29737532)
chr7 (337-464)||(24300317-24300444)
chr7 (337-464)||(41427821-41427948)
chr7 (337-461)||(27596261-27596385)
chr7 (337-464)||(4040947-4041074)
chr7 (339-451)||(25943831-25943943)
chr7 (337-464)||(6392271-6392398)
chr7 (337-460)||(31689530-31689653)
chr7 (337-460)||(38276722-38276845)
chr7 (337-464)||(21442971-21443098)
chr7 (462-559)||(6392431-6392528)
chr7 (462-559)||(4041107-4041204)
chr7 (462-559)||(27596129-27596226)
chr7 (462-559)||(40232158-40232255)
chr7 (468-559)||(31689396-31689487)
chr7 (462-559)||(29737565-29737662)
chr7 (360-464)||(48838082-48838187)
chr7 (462-559)||(25943690-25943787)
chr7 (462-559)||(38276588-38276685)
chr7 (337-444)||(22337710-22337818)
chr7 (462-559)||(41427691-41427788)
chr7 (461-558)||(21442844-21442939)
chr7 (337-428)||(22619524-22619615)
chr7 (496-559)||(24300197-24300260)
chr7 (482-559)||(22338148-22338225)
chr7 (511-559)||(22619959-22620007)
chr7 (462-532)||(48838220-48838288)
chr7 (335-366)||(31466590-31466621)
chr7 (337-399)||(44341008-44341068)
chr7 (337-366)||(22338239-22338268)
chr7 (337-370)||(25943649-25943682)
chr7 (337-370)||(27596086-27596119)
chr7 (337-366)||(47713734-47713763)
chr7 (337-366)||(47713811-47713840)
[»] chr3 (25 HSPs)
chr3 (337-464)||(41346047-41346174)
chr3 (337-464)||(54014237-54014364)
chr3 (337-464)||(51545662-51545789)
chr3 (337-461)||(50676475-50676599)
chr3 (337-464)||(12568181-12568308)
chr3 (337-464)||(13544645-13544772)
chr3 (337-464)||(40496773-40496900)
chr3 (333-464)||(48169720-48169851)
chr3 (346-460)||(24709019-24709133)
chr3 (462-559)||(40496933-40497030)
chr3 (462-559)||(51545822-51545919)
chr3 (462-559)||(24709170-24709267)
chr3 (337-444)||(30459806-30459913)
chr3 (463-559)||(54014398-54014494)
chr3 (462-556)||(13542838-13542932)
chr3 (462-559)||(41346207-41346304)
chr3 (462-559)||(48169884-48169981)
chr3 (462-559)||(50676634-50676730)
chr3 (462-559)||(48737686-48737783)
chr3 (372-464)||(48737561-48737653)
chr3 (337-385)||(16338962-16339010)
chr3 (482-559)||(30462848-30462925)
chr3 (337-370)||(40497040-40497073)
chr3 (337-370)||(48169991-48170024)
chr3 (337-370)||(50676740-50676773)
[»] chr1 (29 HSPs)
chr1 (337-464)||(1929389-1929516)
chr1 (337-461)||(46370927-46371051)
chr1 (337-464)||(28036874-28037001)
chr1 (333-460)||(39151074-39151201)
chr1 (337-464)||(46862556-46862683)
chr1 (337-464)||(32045833-32045960)
chr1 (337-464)||(38321645-38321772)
chr1 (337-464)||(50776997-50777124)
chr1 (337-464)||(8229063-8229190)
chr1 (340-464)||(38817777-38817901)
chr1 (462-559)||(38321805-38321902)
chr1 (337-464)||(40562607-40562734)
chr1 (462-559)||(1929260-1929357)
chr1 (462-559)||(50777157-50777254)
chr1 (462-559)||(46862716-46862813)
chr1 (337-452)||(1207636-1207750)
chr1 (462-559)||(39150940-39151037)
chr1 (462-559)||(32045993-32046090)
chr1 (475-559)||(46371094-46371178)
chr1 (462-559)||(28036743-28036841)
chr1 (462-559)||(1207495-1207592)
chr1 (462-559)||(8229223-8229321)
chr1 (462-559)||(40562479-40562574)
chr1 (364-464)||(9129575-9129675)
chr1 (462-556)||(9129447-9129542)
chr1 (334-370)||(50777264-50777300)
chr1 (337-370)||(46862823-46862856)
chr1 (401-446)||(47603764-47603809)
chr1 (330-366)||(50876357-50876393)
[»] chr8 (27 HSPs)
chr8 (337-464)||(27820773-27820900)
chr8 (337-464)||(17493526-17493653)
chr8 (337-464)||(38070068-38070195)
chr8 (337-464)||(11254500-11254627)
chr8 (337-464)||(18575028-18575155)
chr8 (337-460)||(39906911-39907033)
chr8 (337-464)||(17336143-17336270)
chr8 (337-459)||(9753770-9753892)
chr8 (462-559)||(17493686-17493783)
chr8 (462-559)||(18575188-18575285)
chr8 (462-559)||(27820933-27821030)
chr8 (462-554)||(11254660-11254752)
chr8 (340-464)||(12738539-12738663)
chr8 (337-459)||(13243724-13243846)
chr8 (462-559)||(38069938-38070035)
chr8 (462-559)||(39907068-39907165)
chr8 (462-559)||(12738409-12738506)
chr8 (462-542)||(17336030-17336110)
chr8 (462-559)||(9753930-9754026)
chr8 (337-444)||(11146770-11146877)
chr8 (482-559)||(11147829-11147906)
chr8 (462-555)||(13243594-13243686)
chr8 (337-399)||(20244683-20244743)
chr8 (337-399)||(20248418-20248478)
chr8 (337-370)||(11254767-11254800)
chr8 (337-370)||(17493793-17493826)
chr8 (337-370)||(18575295-18575328)
[»] chr5 (20 HSPs)
chr5 (337-464)||(36982186-36982313)
chr5 (337-464)||(14044056-14044183)
chr5 (335-459)||(2970842-2970966)
chr5 (337-464)||(42897547-42897668)
chr5 (462-559)||(42897417-42897514)
chr5 (462-559)||(36982346-36982443)
chr5 (337-444)||(33403194-33403301)
chr5 (462-554)||(14044216-14044307)
chr5 (337-444)||(36768782-36768889)
chr5 (482-559)||(33404409-33404486)
chr5 (462-559)||(36767919-36768014)
chr5 (462-559)||(2970709-2970805)
chr5 (486-559)||(5712600-5712673)
chr5 (337-370)||(14044322-14044355)
chr5 (337-370)||(36982453-36982486)
chr5 (337-366)||(40512912-40512941)
chr5 (337-370)||(42897374-42897407)
chr5 (338-366)||(5364421-5364449)
chr5 (372-428)||(5712261-5712317)
chr5 (330-366)||(37304377-37304413)
[»] scaffold0047 (3 HSPs)
scaffold0047 (337-462)||(69753-69878)
scaffold0047 (462-558)||(69913-70009)
scaffold0047 (337-370)||(70020-70053)
[»] chr6 (27 HSPs)
chr6 (335-464)||(1241107-1241236)
chr6 (337-461)||(13041972-13042096)
chr6 (337-464)||(28541760-28541887)
chr6 (337-458)||(16435779-16435900)
chr6 (337-460)||(12350272-12350395)
chr6 (335-461)||(29182589-29182715)
chr6 (337-464)||(30736419-30736546)
chr6 (337-464)||(7271251-7271379)
chr6 (462-559)||(12350432-12350529)
chr6 (462-559)||(28541630-28541727)
chr6 (462-559)||(29182751-29182848)
chr6 (462-559)||(30736579-30736676)
chr6 (337-456)||(1870533-1870653)
chr6 (360-464)||(31013668-31013772)
chr6 (462-559)||(7271121-7271218)
chr6 (346-455)||(31833747-31833856)
chr6 (462-559)||(16435939-16436032)
chr6 (462-559)||(1241269-1241365)
chr6 (383-464)||(13210390-13210471)
chr6 (462-559)||(13042132-13042227)
chr6 (462-558)||(31013539-31013635)
chr6 (464-559)||(13210506-13210598)
chr6 (462-559)||(1870694-1870788)
chr6 (337-370)||(28541587-28541620)
chr6 (337-370)||(12350539-12350572)
chr6 (337-370)||(16436042-16436075)
chr6 (462-559)||(31833634-31833726)
[»] scaffold0061 (2 HSPs)
scaffold0061 (337-464)||(10190-10317)
scaffold0061 (462-559)||(10060-10157)
[»] scaffold0519 (3 HSPs)
scaffold0519 (337-464)||(10766-10893)
scaffold0519 (462-554)||(10641-10733)
scaffold0519 (337-370)||(10593-10626)
[»] scaffold0532 (2 HSPs)
scaffold0532 (357-460)||(3834-3937)
scaffold0532 (462-559)||(3974-4071)
[»] scaffold1194 (2 HSPs)
scaffold1194 (337-464)||(978-1106)
scaffold1194 (462-542)||(1130-1208)
[»] scaffold0016 (2 HSPs)
scaffold0016 (462-556)||(92215-92309)
scaffold0016 (337-383)||(92374-92420)
[»] scaffold0459 (1 HSPs)
scaffold0459 (337-366)||(12752-12781)
[»] scaffold0366 (2 HSPs)
scaffold0366 (337-366)||(10393-10422)
scaffold0366 (337-366)||(14059-14088)


Alignment Details
Target: chr2 (Bit Score: 291; Significance: 1e-163; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 19 - 321
Target Start/End: Original strand, 9669772 - 9670074
Alignment:
Q  19 gaacgtccatgtggagtccaattagatgtttaatggtcatgttaatagttgagacagccttaactcacgcacgaagttccatggaatgactaatttaagg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9669772 gaacgtccatgtggagtccaattagatgtttaatggtcatgttaatagttgagacagccttaattcacgcacgaagttccatggaatgactaatttaagg 9669871  T
Q  119 ctaatttacagaattatagatcaattttatggtttgttccttttgtattctttatctaatgactaagacttccaactagaaccataaacgatacactcaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9669872 ctaatttacagaattatagatcaattttatggtttgttccttttgtattctttatctaatgactaagacttccaactagaaccataaacgatacactcaa 9669971  T
Q  219 tggactcgtcatcaagtaatacaatgtttagtcgcagacatttgcatgcagaagactgagaatgagaaatattttacggagctgtggaccaatttgaaat 318  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9669972 tggactcgtcatcaagtaatacaatgtctagtcgcagacatttgcatgcagaagactgagaatgagaaatattttacggagttgtggaccaatttgaaat 9670071  T
Q  319 att 321  Q
    |||    
T  9670072 att 9670074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 45080718 - 45080591
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45080718 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatttacc 45080619  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  45080618 ccttataaatactttttgtggtccccat 45080591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 2110220 - 2110347
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  2110220 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttatcagatttctaagcaaaatttgacagatttacc 2110319  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  2110320 ccttataaatactttttgtggtccccat 2110347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 43370674 - 43370801
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  43370674 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttcttagatttctaagcaaaatttgacagatttacc 43370773  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  43370774 ccttataaatactttttgtggtccccat 43370801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 29193984 - 29194112
Alignment:
Q  333 aaactactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatt 432  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29193984 aaactactccctccgtccctgaataagtgacctatttgtaaaaaaaatgtgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatt 29194083  T
Q  433 taccccttataaatactttttgtggtccc 461  Q
    |||||||||||||||||||||||||||||    
T  29194084 taccccttataaatactttttgtggtccc 29194112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 4828389 - 4828262
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  4828389 tactccctccgtccctcaataagtgacatatttgtaaaaaatatttgtcccacaatatttgaccttctcaaatttctaagcaaaatttgacaaatttacc 4828290  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  4828289 ccttataaatactttttgtggtccccat 4828262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 339 - 464
Target Start/End: Complemental strand, 28585981 - 28585856
Alignment:
Q  339 ctccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacccc 438  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||     
T  28585981 ctccctccgtccctgaataagtgacctatttgtaaaaaatatttatcccacaatacttaaccttctcagatttctaagcaaaatttgacagatttaccct 28585882  T
Q  439 ttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||    
T  28585881 ttataaatactttttgtggtccccat 28585856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 362 - 459
Target Start/End: Complemental strand, 8381591 - 8381494
Alignment:
Q  362 acctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtggtc 459  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  8381591 acctatttgtaaaaaatatttgtcccacgatacttgaccttctcaaatttctaaataaaatttgacagatttaccccttataaatactttttgtggtc 8381494  T

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Target: chr2; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 2110380 - 2110477
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  2110380 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 2110477  T

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Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 28585823 - 28585726
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  28585823 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatctttacacttttcttaatctgtg 28585726  T

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Target: chr2; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 29194148 - 29194245
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  29194148 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatttgtg 29194245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 1779372 - 1779245
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||  |||||||||   | ||||||||||||||||||| | ||| ||||||| ||||||||||| ||||| |||||||||||    
T  1779372 tactccctccgtccctcaatacttgacctattaaaagaaaatatttgtcccacaatgcctgatcttctcagatttctaagcagaatttaacagatttacc 1779273  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    | ||||||||||||||||||||||||||    
T  1779272 ctttataaatactttttgtggtccccat 1779245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 337 - 444
Target Start/End: Complemental strand, 31922139 - 31922032
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    ||||| ||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||  |||||||||||||||  ||||||    
T  31922139 tactctctccgtccctaaataagtgacatatttgtaaaaaaaaattgtcccaaaatacttgaccttctcaaattttaaagcaaaatttgacaattttacc 31922040  T
Q  437 ccttataa 444  Q
    ||||||||    
T  31922039 ccttataa 31922032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 337 - 456
Target Start/End: Complemental strand, 42847207 - 42847088
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||| ||||||||| | ||||  ||||||||||| ||||||||||||||||| ||||||||||||| ||| |||| |||||| ||||||||| |||||||    
T  42847207 tactacctccgtcctttaatatttgacctatttgaaaaaaatatttgtcccataatacttgaccttttcagatttttaagcagaatttgacaaatttacc 42847108  T
Q  437 ccttataaatactttttgtg 456  Q
    ||||||||||||||||||||    
T  42847107 ccttataaatactttttgtg 42847088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 4828229 - 4828132
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||  |||||||| ||||||||||||||||    
T  4828229 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctttttcttttatctttacacttttcttaatctgtg 4828132  T

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Target: chr2; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 43370834 - 43370931
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||  || ||||| ||||||||||||||||    
T  43370834 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatttttacacttttcttaatctgtg 43370931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 334 - 464
Target Start/End: Original strand, 16964810 - 16964943
Alignment:
Q  334 aactactccctccgtccctaaataagtgacctatttgta---aaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacaga 430  Q
    ||||||||||||||||||| ||||  ||||  ||||| |   ||||| ||| ||||||||||||||||||||||||||||| |||| |||||||||||      
T  16964810 aactactccctccgtccctcaatacttgactcatttggaaagaaaaaaattcgtcccacaatacttgaccttctcaaatttttaagtaaaatttgacaag 16964909  T
Q  431 tttaccccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||| ||||    
T  16964910 tttaccccttataaatactttttgtggtctccat 16964943  T

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Target: chr2; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 8381456 - 8381359
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||  |||||||||||||||    
T  8381456 cattacttaaaaatgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctatttctttcatctttacatttttcttaatctgtg 8381359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 372 - 460
Target Start/End: Complemental strand, 39646591 - 39646503
Alignment:
Q  372 aaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtggtcc 460  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||  | ||||||||| |||||||||||||||||||||||||||||||    
T  39646591 aaaaaatatttgtcccacaatatttgacattctcagatttctaaatagaatttgacaaatttaccccttataaatactttttgtggtcc 39646503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 25898463 - 25898570
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||||||||||||||||| | || ||||| |||||| |||||||||||||||  ||||||||||||| |  |||||     
T  25898463 tactccctccgtccctgaataagtgacctatttgtaaaaaaaaattatcccaaaatactcgaccttctcaaattttaaagcaaaatttgataattttact 25898562  T
Q  437 ccttataa 444  Q
    ||||||||    
T  25898563 ccttataa 25898570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 462 - 556
Target Start/End: Complemental strand, 1779212 - 1779118
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatct 556  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| | ||||||| ||||| | |||||||| ||||||||| |||||||||||||    
T  1779212 cattacttaaaagtgaaaaagtttcaaaataatgacaaagacaattcagtaaaaatatcattatctttctttcatctttacacttttcttaatct 1779118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 45080558 - 45080463
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| ||||||||| ||||||| |||| ||||| |||||||||||||  ||||||||| ||||||||| ||||||||||||||||    
T  45080558 cattacttaaaagtgaaaaagtttcaacataatgataagggcaactcagtaaaagtatca--ctctttctttcatctttacacttttcttaatctgtg 45080463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 9370534 - 9370631
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | |||||||  |||| | ||||| || ||||||||| ||||||||||||||||    
T  9370534 cattacttaaaagtgaaaaagtttcaaaataatgacaaggacaattcagtaaaaaaatcattttctttttttcatctttacacttttcttaatctgtg 9370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 482 - 559
Target Start/End: Complemental strand, 31921741 - 31921664
Alignment:
Q  482 gtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||| |||||||| | |||| ||| ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  31921741 gtttaaaaataataataagggcaatttagtaaaaatatcactctctttctttcatctttacacttttcttaatctgtg 31921664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 43377346 - 43377256
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaat 554  Q
    |||||||||||||||||   ||||||||||||| ||||| |||| | ||||||||||||| | |||||||| ||||||||| |||||||||||    
T  43377346 cattacttaaaagtgaag--gtttcaaaataataacaagtacaattcagtaaaagtatcattttctttctttcatctttacacttttcttaat 43377256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 498 - 559
Target Start/End: Original strand, 30422588 - 30422649
Alignment:
Q  498 aaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||| ||||| |||||||||||||||||||||||| |||| |||| ||||||||||||||||    
T  30422588 aagggcaactcagtaaaagtatcactctctttctttcatcgttacacttttcttaatctgtg 30422649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 527
Target Start/End: Complemental strand, 42847047 - 42846984
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctct 527  Q
    ||||||||||||||||| |  |||||||||||| |||||||||| ||||||||| ||||| |||||    
T  42847047 cattacttaaaagtgaaga--tttcaaaataataacaaggacaatttagtaaaaatatcattctct 42846984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 370
Target Start/End: Complemental strand, 29194290 - 29194255
Alignment:
Q  335 actactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||||| |||||||||||||||||    
T  29194290 actactccctccgtccctgaataagtgacctatttg 29194255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 558
Target Start/End: Complemental strand, 39646426 - 39646348
Alignment:
Q  482 gtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttac--tcttttcttaatctgt 558  Q
    ||||||||||||| |||||| ||| | ||||||| ||||| |||||||||| ||| |||||  | ||||||||||||||    
T  39646426 gtttcaaaataataacaagggcaattcagtaaaaatatcattctctttctttcatttttacatttttttcttaatctgt 39646348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 306 - 340
Target Start/End: Original strand, 9670075 - 9670109
Alignment:
Q  306 accaatttgaaatattcatatccttataaactact 340  Q
    ||||||||||||||||||||| |||||||||||||    
T  9670075 accaatttgaaatattcatattcttataaactact 9670109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 16970316 - 16970411
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||||||||   |||| |||||||| | |||| ||| | ||||||| ||||| | ||||||||  |||||||| ||||||||||| ||||    
T  16970316 cattacttaaaagtgaag--gtttaaaaataataataagggcaattcagtaaaaatatcattatctttcttttatctttacacttttcttaatatgtg 16970411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 366
Target Start/End: Original strand, 42038523 - 42038552
Alignment:
Q  337 tactccctccgtccctaaataagtgaccta 366  Q
    ||||||||||||||||||||||||||||||    
T  42038523 tactccctccgtccctaaataagtgaccta 42038552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 43370974 - 43370941
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  43370974 tactccctccgtcccttaataagtgacctatttg 43370941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 45080420 - 45080453
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  45080420 tactccctccgtccctgaataagtgacctatttg 45080453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 559
Target Start/End: Original strand, 25898766 - 25898838
Alignment:
Q  487 aaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||| | |||| ||| | ||||||| ||||||| | |||||| ||||||||| || |||||||||||||    
T  25898766 aaaataataataagggcaattcagtaaaaatatcactttttttctttcatctttacactcttcttaatctgtg 25898838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 213; Significance: 1e-116; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 335 - 559
Target Start/End: Complemental strand, 51744786 - 51744562
Alignment:
Q  335 actactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagattta 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51744786 actactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagattta 51744687  T
Q  435 ccccttataaatactttttgtggtccccattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttac 534  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  51744686 ccccttataaatactttttgtggtccccattacttaaaagtgaacaagtttcaaaataatgacaagggcaacttagtaaaagtatcactctctttctcac 51744587  T
Q  535 atctttactcttttcttaatctgtg 559  Q
    |||||||| ||||||||||||||||    
T  51744586 atctttacacttttcttaatctgtg 51744562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 40071749 - 40071622
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40071749 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatttacc 40071650  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  40071649 ccttataaatactttttgtggtccccat 40071622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 334 - 464
Target Start/End: Complemental strand, 54438460 - 54438330
Alignment:
Q  334 aactactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagattt 433  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  54438460 aactactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgatcttctcagatttctaagcaaaatttgacagattt 54438361  T
Q  434 accccttataaatactttttgtggtccccat 464  Q
    |||||||||||||||||||||||||||||||    
T  54438360 accccttataaatactttttgtggtccccat 54438330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 925436 - 925309
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  925436 tactcccaccgtccctgaataagtgacctatttgtaaaaaatatttatcctacaatacttgaccttctcagatttctaagcaaaatttgacagatttacc 925337  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  925336 ccttataaatactttttgtggtccccat 925309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 17493753 - 17493880
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  17493753 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtctcacaatacttgatcttctcagatttctaagcaaaatttgacagatttacc 17493852  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||| ||||||||||||||||||    
T  17493853 ccttataaaaactttttgtggtccccat 17493880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 334 - 460
Target Start/End: Complemental strand, 34408960 - 34408834
Alignment:
Q  334 aactactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagattt 433  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||    
T  34408960 aactactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccataatacttgaccttctcagatttctaggtaaaatttgacagattt 34408861  T
Q  434 accccttataaatactttttgtggtcc 460  Q
    |||||||||||||||||||||||||||    
T  34408860 accccttataaatactttttgtggtcc 34408834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 340 - 460
Target Start/End: Complemental strand, 37065050 - 37064930
Alignment:
Q  340 tccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacccct 439  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  37065050 tccctccgtccctgaataagtgacttatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacatatttacccct 37064951  T
Q  440 tataaatactttttgtggtcc 460  Q
    |||||||||||||||||||||    
T  37064950 tataaatactttttgtggtcc 37064930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 39787992 - 39788120
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaa-aatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttac 435  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  39787992 tactccctccgtctctaaataagtgacctatttgtaaaaaaatatttgttccacaatacttgaccttatcagatttctaagcaaaatttgacagatttac 39788091  T
Q  436 cccttataaatactttttgtggtccccat 464  Q
    |||||||||||||||||||||||||||||    
T  39788092 cccttataaatactttttgtggtccccat 39788120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 344 - 464
Target Start/End: Original strand, 47199493 - 47199613
Alignment:
Q  344 tccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttata 443  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||    
T  47199493 tccgtccgtgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaggcaaaatttaacagatttaccccatata 47199592  T
Q  444 aatactttttgtggtccccat 464  Q
    |||||||||||||||||||||    
T  47199593 aatactttttgtggtccccat 47199613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 20789673 - 20789800
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    ||||| |||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||||| |    
T  20789673 tactctctccgtccctgaataaatgatctatttgtaaaaaatatttgtcccataatacttgatcttctcagatttctaagtaaaatttgacagatttatc 20789772  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  20789773 ccttataaatactttttgtggtccccat 20789800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 21240326 - 21240453
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||| | |||||||||||||||||    
T  21240326 tactccctccgtccctcaatacttgacctatttgaaaaaaatatttgtcccataatacttgaccttctcagacttctaagtagaatttgacagatttacc 21240425  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    || |||||||||||||||||||||||||    
T  21240426 ccatataaatactttttgtggtccccat 21240453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 39788153 - 39788250
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  39788153 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 39788250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 360 - 459
Target Start/End: Complemental strand, 3172296 - 3172197
Alignment:
Q  360 tgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtggtc 459  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||  |||||||||||||||||||||    
T  3172296 tgacctatttgaaaaaaatatttgtcccacaatacttgactttctcaaatttctaagcagaatttgacaaatttaccttttataaatactttttgtggtc 3172197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 32218239 - 32218110
Alignment:
Q  335 actactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagattta 434  Q
    ||||||| |||||||||| ||||  | ||||||||| ||||||||||||||| | |||||||||  |||||| |||| |||||| |||||||||||||||    
T  32218239 actactctctccgtccctcaatacttcacctatttgaaaaaaatatttgtcctataatacttgattttctcagatttttaagcagaatttgacagattta 32218140  T
Q  435 ccccttataaatactttttgtggtccccat 464  Q
    |||||||||||||||||||||||| |||||    
T  32218139 ccccttataaatactttttgtggttcccat 32218110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 40071589 - 40071492
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  40071589 cattgcttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 40071492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 463 - 559
Target Start/End: Original strand, 17493914 - 17494010
Alignment:
Q  463 attacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| | |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  17493914 attacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcaataaaagtatcactctctttctttcatctttacacttttcttaatctgtg 17494010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 344 - 464
Target Start/End: Original strand, 46870614 - 46870734
Alignment:
Q  344 tccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttata 443  Q
    ||||||||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||| |||| |||| | ||||||||| ||||| ||||||||    
T  46870614 tccgtccctcaatacttgacctatttagaaaaaatatttgtcccacaatacttgacctgctcagatttttaagtacaatttgacaaatttatcccttata 46870713  T
Q  444 aatactttttgtggtccccat 464  Q
    |||||||||||||||||||||    
T  46870714 aatactttttgtggtccccat 46870734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 462 - 556
Target Start/End: Complemental strand, 37064893 - 37064799
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatct 556  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  37064893 cattacttaaaagtgaaaaagtttcaaaaaaatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatct 37064799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 20789833 - 20789929
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  20789833 cattacttaaaagtgaaaaagtttcaaaataatgacaagg-cagctcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 20789929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 555
Target Start/End: Complemental strand, 54438297 - 54438204
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatc 555  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  54438297 cattacttaaaagtgaaaaagttttaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatc 54438204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 10441143 - 10441251
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaata-tttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttac 435  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||  |||||||||||||||  |||||    
T  10441143 tactccctccgtccctgaataagtgacctatttgtaaaaaaaaatttgtcccaaaatacttgaccttctcaaattttaaagcaaaatttgacaattttac 10441242  T
Q  436 cccttataa 444  Q
    | |||||||    
T  10441243 ctcttataa 10441251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 366 - 464
Target Start/End: Complemental strand, 33801053 - 33800956
Alignment:
Q  366 atttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||| | | ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  33801053 atttgtaaaaaatatttgttctataatacttgaccttctcagatttctaagtaaaatttgacagatttacctcttataaatac-ttttgtggtccccat 33800956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 925276 - 925179
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| | ||||||  |||||||| ||||||||||||||||    
T  925276 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactttatttcttttatctttacacttttcttaatctgtg 925179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 33800923 - 33800826
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||| ||||||||||| |||||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  33800923 cattatttaaaagtgaaaaagtttcaaaatgatgacaagggcaactcagtaaaagtatcactctctttcttccatctttacacttttctgaatctgtg 33800826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 47199646 - 47199743
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||| | ||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  47199646 cattacttaaaagtgaaaaagttttaaaataatgacaagggcaactcaataaaaatatcactctctttctttcatctttacacttttcttaatctgtg 47199743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 41555462 - 41555584
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||  ||||  ||||||||||| |||||| ||||||||| ||||| ||||||||||||||||| |||||  |||||||||  ||||||    
T  41555462 tactccctccgtcccgcaatacttgacctatttggaaaaaaaatttgtcccgcaataattgaccttctcaaatttttaagcttaatttgacaagtttacc 41555561  T
Q  437 ccttataaatactttttgtggtc 459  Q
    |||||||  ||||||||||||||    
T  41555562 ccttatagttactttttgtggtc 41555584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 34408797 - 34408700
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| | ||||||||||| |||||||||| ||||||||| |||||| |||| ||||    
T  34408797 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcaataaaagtatcattctctttctttcatctttacacttttcctaatatgtg 34408700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 32218077 - 32217980
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||||| | | ||||||| ||| | |||||||||| ||||||||| || |||||||||||||    
T  32218077 cattacttaaaagtgaaaaagtttcaaaataatgacaaggactattcagtaaaaatataattctctttctttcatctttacactcttcttaatctgtg 32217980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 342 - 458
Target Start/End: Complemental strand, 28910452 - 28910335
Alignment:
Q  342 cctccgtccctaaataagtgacctatttgtaaaaaa-tatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacccctt 440  Q
    |||||||||||  |||  ||||||||||| |||||| ||||||| | ||| || || ||||||||| |||| |||||| ||||||||| |||||||||||    
T  28910452 cctccgtccctcgatatttgacctatttgaaaaaaaatatttgttctacagtatttaaccttctcagatttttaagcagaatttgacaaatttacccctt 28910353  T
Q  441 ataaatactttttgtggt 458  Q
    ||||||||||||||||||    
T  28910352 ataaatactttttgtggt 28910335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 372 - 464
Target Start/End: Complemental strand, 53509907 - 53509815
Alignment:
Q  372 aaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtggtccccat 464  Q
    ||||||||||||| |||||||| |||||||| ||| ||||||||| | ||||||||| |||||  |||||||||||||||||||| |||||||    
T  53509907 aaaaaatatttgttccacaatatttgaccttatcagatttctaaggagaatttgacatatttattccttataaatactttttgtgatccccat 53509815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 52101108 - 52101175
Alignment:
Q  397 gaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtggtccccat 464  Q
    |||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  52101108 gaccttctcagatttataagcaaaatttgacagatttaccctttataaatactttttgtggttcccat 52101175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 461 - 559
Target Start/End: Original strand, 52101207 - 52101305
Alignment:
Q  461 ccattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||||||||| || ||||||||||||||||||  ||| | ||||||| ||||| | | |||||| ||||||||| ||||||||||||||||    
T  52101207 ccattacttaaaagtgaaaaaatttcaaaataatgacaagtgcaattcagtaaaaatatcattatatttctttcatctttacacttttcttaatctgtg 52101305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 21240486 - 21240583
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||| |||| ||||||||||||| |||||| | ||| | ||||||| ||||| |||||||||| ||||| ||| ||||||||||||||||    
T  21240486 cattacttaaaaatgaaaaagtttcaaaatagtgacaatgtcaattcagtaaaaatatcattctctttctttcatctctacacttttcttaatctgtg 21240583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 342 - 444
Target Start/End: Complemental strand, 28690189 - 28690088
Alignment:
Q  342 cctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacccctta 441  Q
    ||||||||||| ||||| |||| ||||||||||||| ||| ||| || |||| |||||||||||||||||  |||||||||||||||  |||| ||||||    
T  28690189 cctccgtccctgaataactgacatatttgtaaaaaaaatt-gtcgcaaaatatttgaccttctcaaattttaaagcaaaatttgacaattttatccctta 28690091  T
Q  442 taa 444  Q
    |||    
T  28690090 taa 28690088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 53509782 - 53509690
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaat 554  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||| | ||||| | ||||| ||| |||||| ||||||||| |||||| ||||    
T  53509782 cattatttaaaagtgaaaaagtttcaaaataatgacaatgacaattcagtaacaatatcattctttttctttcatctttacacttttcataat 53509690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 462 - 556
Target Start/End: Complemental strand, 28910296 - 28910204
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatct 556  Q
    |||||||||||||||||   ||||||||||||| |||||||||| | ||||||| ||||| |||||||||| ||||||| |  ||||||||||||    
T  28910296 cattacttaaaagtgaag--gtttcaaaataataacaaggacaattcagtaaaaatatcattctctttctttcatctttgcatttttcttaatct 28910204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 3172159 - 3172063
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatga-caaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||||||||   ||||||||||||| | ||||||||| | ||||||| ||||| | ||||| || |||||||||  |||||||||||||||    
T  3172159 cattacttaaaagtgaag--gtttcaaaataattaacaaggacaattcagtaaaaatatcattatctttttttcatctttacatttttcttaatctgtg 3172063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 54438157 - 54438190
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    ||||||||||||||||||||||||||||||||||    
T  54438157 tactccctccgtccctaaataagtgacctatttg 54438190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 537
Target Start/End: Original strand, 46870767 - 46870840
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatc 537  Q
    |||||||||||||||||   ||||||||||||| |||||||| | | ||||||| ||||| |||||||||| ||||    
T  46870767 cattacttaaaagtgaag--gtttcaaaataataacaaggactattcagtaaaaatatcattctctttctttcatc 46870840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 17494053 - 17494020
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  17494053 tactccctccgtcccttaataagtgacctatttg 17494020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 34408657 - 34408690
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  34408657 tactccctccgtccctgaataagtgacctatttg 34408690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 40071449 - 40071482
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  40071449 tactccctccgtcccttaataagtgacctatttg 40071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 126; Significance: 1e-64; HSPs: 3)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 331 - 464
Target Start/End: Original strand, 16351 - 16484
Alignment:
Q  331 ataaactactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacaga 430  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16351 ataaactactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacaga 16450  T
Q  431 tttaccccttataaatactttttgtggtccccat 464  Q
    ||||||| ||||||||||||||||||||||||||    
T  16451 tttaccctttataaatactttttgtggtccccat 16484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 16517 - 16601
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||             ||||||||||||| ||||||||| ||||||||||||||||    
T  16517 cattacttaaaagtgaaaaagtttcaaaataatgacaaaggcaac-------------cactctctttctttcatctttacacttttcttaatctgtg 16601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 16647 - 16611
Alignment:
Q  334 aactactccctccgtccctaaataagtgacctatttg 370  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16647 aactattccctccgtccctaaataagtgacctatttg 16611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 4e-61; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 40232415 - 40232288
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40232415 tactccctccgtccttgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 40232316  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  40232315 ccttataaatactttttgtggtccccat 40232288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 336 - 464
Target Start/End: Original strand, 29737404 - 29737532
Alignment:
Q  336 ctactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttac 435  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  29737404 ctactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttcttagatttctaagcaaaatttgacagatttac 29737503  T
Q  436 cccttataaatactttttgtggtccccat 464  Q
    |||||||||||||||||||||||||||||    
T  29737504 cccttataaatactttttgtggtccccat 29737532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 24300444 - 24300317
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24300444 tactccctccgtctttgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttatcaaatttctaagcaaaatttgacagatttacc 24300345  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  24300344 ccttataaatactttttgtggtccccat 24300317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 41427948 - 41427821
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  41427948 tactccctccgtccttaaataagtgacctatttgtaaaaaatatttgtcccacaatatttgatcttctcagatttctaagcaaaatttgacagatttacc 41427849  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  41427848 ccttataaatactttttgtggtccccat 41427821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 27596385 - 27596261
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27596385 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaggcaaaatttgacagatttacc 27596286  T
Q  437 ccttataaatactttttgtggtccc 461  Q
    | |||||||||||||||||||||||    
T  27596285 ctttataaatactttttgtggtccc 27596261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 4040947 - 4041074
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  4040947 tactccctccgtctctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacggatttacc 4041046  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    |||||||||||||| |||||||||||||    
T  4041047 ccttataaatacttgttgtggtccccat 4041074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 339 - 451
Target Start/End: Complemental strand, 25943943 - 25943831
Alignment:
Q  339 ctccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacccc 438  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25943943 ctccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatttacccc 25943844  T
Q  439 ttataaatacttt 451  Q
    |||||||||||||    
T  25943843 ttataaatacttt 25943831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 6392271 - 6392398
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  6392271 tacttcctccgttccttaataagtgatctatttgtaaaaaatatttgtcccacaatactttaccttctcagatttctaagcaaaatttgacagatttacc 6392370  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  6392371 ccttataaatactttttgtggtccccat 6392398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 337 - 460
Target Start/End: Complemental strand, 31689653 - 31689530
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31689653 tactcccttcgtccctgaataagtgacctatttgtaaaaaatatctgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatttacc 31689554  T
Q  437 ccttataaatactttttgtggtcc 460  Q
    ||||||| ||||||||||||||||    
T  31689553 ccttatatatactttttgtggtcc 31689530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 337 - 460
Target Start/End: Complemental strand, 38276845 - 38276722
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  38276845 tactccctccgtccctcaatacttgacctatttgaaaaaaatatttgtcccacaatacttgaccttttcatatttctaagcagaatttgacagatttacc 38276746  T
Q  437 ccttataaatactttttgtggtcc 460  Q
    ||||||||||||||||||||||||    
T  38276745 ccttataaatactttttgtggtcc 38276722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 21443098 - 21442971
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| | ||||||||| ||||| |    
T  21443098 tactccctccgtccctcaatacttgacctatttgaaaaaaatatttgtcccacaatacttgaccttctcagatttttaagtagaatttgacaaatttatc 21442999  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||| ||||    
T  21442998 ccttataaatactttttgtggtctccat 21442971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 6392431 - 6392528
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  6392431 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaacttagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 6392528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 4041107 - 4041204
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  4041107 cattacttaaaagtgaaaaagtttcaaaataatgacaaggacaactcagtaaaagtatcactccctttctttcatctttacacttttcttaatctgtg 4041204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 27596226 - 27596129
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  27596226 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaacccagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 27596129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 40232255 - 40232158
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  40232255 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatctttacacttttcttaatctgtg 40232158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 468 - 559
Target Start/End: Complemental strand, 31689487 - 31689396
Alignment:
Q  468 ttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  31689487 ttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 31689396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 29737565 - 29737662
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||  || ||||| ||||||||||||||||    
T  29737565 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatttttacacttttcttaatctgtg 29737662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 360 - 464
Target Start/End: Original strand, 48838082 - 48838187
Alignment:
Q  360 tgacctatttgtaaaa-aatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtggt 458  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||||    
T  48838082 tgacctatttgaaaaaaaatatttgtcccacaatacttgactttctcagatttttaagcagaatttgacaaatttaccccttataaatactttttgtggt 48838181  T
Q  459 ccccat 464  Q
    | ||||    
T  48838182 ctccat 48838187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 25943787 - 25943690
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||| | ||| | |||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  25943787 cattacttaaaagtgaaaaagtttcaaaataatgacaatggcaattcagtaaaagtatcactctctttctttcatctttacaattttcttaatctgtg 25943690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 38276685 - 38276588
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| | |||||||  |||| |||||||||| ||||||||||||||||||||||||||    
T  38276685 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcagtaaaaacatcattctctttctttcatctttactcttttcttaatctgtg 38276588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 22337710 - 22337818
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatat-ttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttac 435  Q
    |||||||||||||||| |||||||||||||||||||||||| |  |||||||| ||||||||||||||||||||||  |||||||| ||||||  |||||    
T  22337710 tactccctccgtccctgaataagtgacctatttgtaaaaaaaaaattgtcccaaaatacttgaccttctcaaattttaaagcaaaaattgacaattttac 22337809  T
Q  436 cccttataa 444  Q
    |||||||||    
T  22337810 cccttataa 22337818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 41427788 - 41427691
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| | | ||||||||| |||||||||||| ||||||||| ||||| ||||||||||    
T  41427788 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcaataaaagtattactctctttctttcatctttacactttttttaatctgtg 41427691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 461 - 558
Target Start/End: Complemental strand, 21442939 - 21442844
Alignment:
Q  461 ccattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgt 558  Q
    ||||||||||||||||||  |||||||||||||| |||||| ||| ||||||||| ||||| ||| ||| || ||||||||| |||||||||||||||    
T  21442939 ccattacttaaaagtgaa--agtttcaaaataataacaagggcaatttagtaaaaatatcattctatttttttcatctttacacttttcttaatctgt 21442844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 337 - 428
Target Start/End: Original strand, 22619524 - 22619615
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgaca 428  Q
    |||||||||||| ||| |||||||||||||||||||||| | | ||||  || ||||||||| ||||||||||||  |||||||||||||||    
T  22619524 tactccctccgttcctgaataagtgacctatttgtaaaataaaattgtttcaaaatacttgatcttctcaaattttaaagcaaaatttgaca 22619615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 496 - 559
Target Start/End: Complemental strand, 24300260 - 24300197
Alignment:
Q  496 acaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  24300260 acaagggcaactcagtaaaagtatcactctctttctttcatcttcacacttttcttaatctgtg 24300197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 482 - 559
Target Start/End: Original strand, 22338148 - 22338225
Alignment:
Q  482 gtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||| |||||||| | |||| ||| | ||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  22338148 gtttaaaaataataataagggcaattcagtaaaaatatcactctctttctttcatctttacacttttcttaatctgtg 22338225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 511 - 559
Target Start/End: Original strand, 22619959 - 22620007
Alignment:
Q  511 taaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  22619959 taaaaatatcactctctttctttcatctttacacttttcttaatctgtg 22620007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 532
Target Start/End: Original strand, 48838220 - 48838288
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttctt 532  Q
    ||||||||||||||||  |||||| |||||||| |||||||||| ||||||||| ||||| | ||||||||    
T  48838220 cattacttaaaagtga--aagttttaaaataataacaaggacaatttagtaaaaatatcattttctttctt 48838288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 366
Target Start/End: Complemental strand, 31466621 - 31466590
Alignment:
Q  335 actactccctccgtccctaaataagtgaccta 366  Q
    ||||||||||||||||||||||||||||||||    
T  31466621 actactccctccgtccctaaataagtgaccta 31466590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 44341008 - 44341068
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgac 399  Q
    |||||||||||||||  ||||||  ||| ||||||||||||||||||||||| |||| |||||    
T  44341008 tactccctccgtcccataataag--acccatttgtaaaaaatatttgtcccaaaataattgac 44341068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 366
Target Start/End: Complemental strand, 22338268 - 22338239
Alignment:
Q  337 tactccctccgtccctaaataagtgaccta 366  Q
    ||||||||||||||||||||||||||||||    
T  22338268 tactccctccgtccctaaataagtgaccta 22338239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 25943649 - 25943682
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  25943649 tactccctccgtccctgaataagtgacctatttg 25943682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 27596086 - 27596119
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    ||||||||||||||||||||||||||| ||||||    
T  27596086 tactccctccgtccctaaataagtgacttatttg 27596119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 366
Target Start/End: Complemental strand, 47713763 - 47713734
Alignment:
Q  337 tactccctccgtccctaaataagtgaccta 366  Q
    ||||||||||||||||||||||||||||||    
T  47713763 tactccctccgtccctaaataagtgaccta 47713734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 366
Target Start/End: Complemental strand, 47713840 - 47713811
Alignment:
Q  337 tactccctccgtccctaaataagtgaccta 366  Q
    ||||||||||||||||||||||||||||||    
T  47713840 tactccctccgtccctaaataagtgaccta 47713811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 4e-61; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 41346047 - 41346174
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41346047 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatttacc 41346146  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  41346147 ccttataaatactttttgtggtccccat 41346174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 54014237 - 54014364
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  54014237 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatttacc 54014336  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  54014337 ccttataaatactttttgtggtccccat 54014364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 51545662 - 51545789
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  51545662 tactccctccgttcctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatttacc 51545761  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  51545762 ccttataaatactttttgtggtccccat 51545789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 50676475 - 50676599
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  50676475 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttttaagcaaaatttgacagatttacc 50676574  T
Q  437 ccttataaatactttttgtggtccc 461  Q
    |||||||||||||||||||||||||    
T  50676575 ccttataaatactttttgtggtccc 50676599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 12568308 - 12568181
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  12568308 tactccctccgtccctgaataagtgacatatttgtaaaaaatatttgtcccacaatacttgactttctcagatttctaagcaaaatttgacagatttacc 12568209  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  12568208 ccttataaatactttttgtggtccccat 12568181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 13544772 - 13544645
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  13544772 tactccctccgtccctgaataagtgacatatttgtaaaaaatatttgtcccacaatacttgactttctcagatttctaagcaaaatttgacagatttacc 13544673  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  13544672 ccttataaatactttttgtggtccccat 13544645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 40496773 - 40496900
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  40496773 tactccctccgtccttgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaaacaaaatttgacagatttacc 40496872  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  40496873 ccttataaatactttttgtggtccccat 40496900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 333 - 464
Target Start/End: Original strand, 48169720 - 48169851
Alignment:
Q  333 aaactactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatt 432  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  48169720 aaactactccctccgtctctgaataagtgacctatttgtaaaaaatatttgtcccataatacttgaccttctcagatttctaagcaaaatttgacagatt 48169819  T
Q  433 taccccttataaatactttttgtggtccccat 464  Q
    || |||||||||||||||||||||||||||||    
T  48169820 tatcccttataaatactttttgtggtccccat 48169851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 346 - 460
Target Start/End: Original strand, 24709019 - 24709133
Alignment:
Q  346 cgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaa 445  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| || |||||||    
T  24709019 cgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttataagcaaaatttgacagatttatcctttataaa 24709118  T
Q  446 tactttttgtggtcc 460  Q
    |||||||||||||||    
T  24709119 tactttttgtggtcc 24709133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 40496933 - 40497030
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  40496933 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 40497030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 51545822 - 51545919
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  51545822 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 51545919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 24709170 - 24709267
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  24709170 cattacttaaaagtgaaaaaatttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 24709267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 30459806 - 30459913
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||||||  ||||||||||||||||||||||  |||||||||||||||  ||||||    
T  30459806 tactccctccgtccctgaataagtgacctatttgtaaaaaaaaattgtccctaaatacttgaccttctcaaattttaaagcaaaatttgacaattttacc 30459905  T
Q  437 ccttataa 444  Q
    ||||||||    
T  30459906 ccttataa 30459913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 463 - 559
Target Start/End: Original strand, 54014398 - 54014494
Alignment:
Q  463 attacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  54014398 attacttaaaagtgaaaaagtttcaaaataatgataagggcaactcagtaaaagtatcactctctttcttttatctttacacttttcttaatctgtg 54014494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 462 - 556
Target Start/End: Complemental strand, 13542932 - 13542838
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatct 556  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  13542932 cattacttaaaagtgaaaaagttttaaaataatgacaagggcaactcagtaaaagtatcaatctctttctttcatctttacacttttcttaatct 13542838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 41346207 - 41346304
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||||||||  ||||||| ||||||||| ||||||||||||||||    
T  41346207 cattacttaaaagtgaaaaagttttaaaataatgacaagggcaactcagtaaaagtatcacttactttctttcatctttacacttttcttaatctgtg 41346304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 48169884 - 48169981
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| || || ||||| ||||||||||||||||||  |||||||| ||||||||||||||||    
T  48169884 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcagctcagtaatagtatcactctctttcttttatctttacacttttcttaatctgtg 48169981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 50676634 - 50676730
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||  |||||||| ||||||||||||||||    
T  50676634 cattacttaaaagtgaaaaagttttaaaataatgacaagg-caactcagtaaaaatatcactctctttcttttatctttacacttttcttaatctgtg 50676730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 48737686 - 48737783
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| | ||||||| ||||| | |||||||| ||||| ||| ||||||||||||||||    
T  48737686 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcagtaaaaatatcattttctttctttcatctctacacttttcttaatctgtg 48737783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 372 - 464
Target Start/End: Original strand, 48737561 - 48737653
Alignment:
Q  372 aaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||  | ||||||||| ||| ||| |||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  48737561 aaaaaatatttgtcttataatacttgatcttttcagatttttaagcagaatttgacaaatttaccctttataaatactttttgtggtccccat 48737653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 385
Target Start/End: Original strand, 16338962 - 16339010
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtc 385  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  16338962 tactctctctgtccctaaataagtgacatatttgtaaaaaatatttgtc 16339010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 559
Target Start/End: Original strand, 30462848 - 30462925
Alignment:
Q  482 gtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||| |||||||| | |||| ||| | ||||||| ||||||||| |||||| ||||||||  ||||||||||||||||    
T  30462848 gtttaaaaataataataagggcaattcagtaaaaatatcactctatttctttcatctttatacttttcttaatctgtg 30462925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 40497073 - 40497040
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  40497073 tactccctccgtcccttaataagtgacctatttg 40497040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 48170024 - 48169991
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  48170024 tactccctccgtcccttaataagtgacctatttg 48169991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 50676773 - 50676740
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  50676773 tactccctccgtcccttaataagtgacctatttg 50676740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 4e-61; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 1929516 - 1929389
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1929516 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcatatttctaagcaaaatttgacagatttacc 1929417  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||| ||||||||||||||||    
T  1929416 ccttataaatattttttgtggtccccat 1929389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 46370927 - 46371051
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  46370927 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacaaatttacc 46371026  T
Q  437 ccttataaatactttttgtggtccc 461  Q
    |||||||||||||||||||||||||    
T  46371027 ccttataaatactttttgtggtccc 46371051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 28037001 - 28036874
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  28037001 tactccctccgtcccttaataaatgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatttatc 28036902  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  28036901 ccttataaatactttttgtggtccccat 28036874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 333 - 460
Target Start/End: Complemental strand, 39151201 - 39151074
Alignment:
Q  333 aaactactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatt 432  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  39151201 aaactactctctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttcttagatttctaagcaaaatttgacagatt 39151102  T
Q  433 taccccttataaatactttttgtggtcc 460  Q
    ||||||||||||||||||||||||||||    
T  39151101 taccccttataaatactttttgtggtcc 39151074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 46862556 - 46862683
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||    
T  46862556 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttcttagatttttaagcaaaatttgacagatttacc 46862655  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  46862656 ccttataaatactttttgtggtccccat 46862683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 32045833 - 32045960
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  32045833 tactccctccgtccctgaataagtgatctatttgtaaaaaatatttgttccacaatacttgaccttctcagatttctaagcaaaatttgaaagatttacc 32045932  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  32045933 ccttataaatactttttgtggtccccat 32045960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 38321645 - 38321772
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| |    
T  38321645 tactccctccgtccctgaataactgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttaaaagatttaac 38321744  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  38321745 ccttataaatactttttgtggtccccat 38321772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 50776997 - 50777124
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    ||||| || |||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  50776997 tactctcttcgtctctaaataagtgacttatttgtaaaaaatatttgtcccataatacttgaccttcttaaatttctaagcaaaatttgacagatttacc 50777096  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    |||||||||||||||||| |||||||||    
T  50777097 ccttataaatactttttggggtccccat 50777124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 8229063 - 8229190
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||| ||||||| | |||| |||||||||||||||| |||||||    
T  8229063 tactccctccgtccctgaataagtgacctatttataaaaaatatttgttcctcaatacttaaccttcttagatttttaagcaaaatttgacaaatttacc 8229162  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  8229163 ccttataaatactttttgtggtccccat 8229190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 340 - 464
Target Start/End: Original strand, 38817777 - 38817901
Alignment:
Q  340 tccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacccct 439  Q
    |||||| |||||| ||||  ||| ||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||| | ||||||||||    
T  38817777 tccctctgtccctcaatacttgatctatttgaaaaaaatatttgtcccataatatttgactttctcaaatttctaagcaaaatttgataaatttacccct 38817876  T
Q  440 tataaatactttttgtggtccccat 464  Q
    |||||||||||||||||||||||||    
T  38817877 tataaatactttttgtggtccccat 38817901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 38321805 - 38321902
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  38321805 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 38321902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 40562734 - 40562607
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||| ||| ||||  ||||||||||| |||||||||||||||||||||||||||| |||||| |||| |||||| ||||||| | |||||||    
T  40562734 tactccctccgtacctcaatacttgacctatttgaaaaaaatatttgtcccacaatacttgacattctcatatttttaagcagaatttgataaatttacc 40562635  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||| ||||||||| ||||    
T  40562634 ccttataaatactctttgtggtctccat 40562607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 1929357 - 1929260
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  1929357 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctttttctttcatctttacacttttcttaatctgtg 1929260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 50777157 - 50777254
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  50777157 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatctttacacttttcttaatctgtg 50777254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 46862716 - 46862813
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| || |||||||||||||||||||||  |||||||| ||||||||||||||||    
T  46862716 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcaggaaaagtatcactctctttcttttatctttacacttttcttaatctgtg 46862813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 337 - 452
Target Start/End: Complemental strand, 1207750 - 1207636
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||| | ||||  ||||||||||| ||||||||||||||  | ||||||||||||||||| ||||||||||| ||||||||||||||| |    
T  1207750 tactccctccgtccttcaatatttgacctatttgaaaaaaatatttgtcttataatacttgaccttctcagatttctaagcagaatttgacagattta-c 1207652  T
Q  437 ccttataaatactttt 452  Q
    ||||||||||||||||    
T  1207651 ccttataaatactttt 1207636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 39151037 - 39150940
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||  ||||||||  |||||||||||||||    
T  39151037 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcattctctttcttttatctttacatttttcttaatctgtg 39150940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 32045993 - 32046090
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||  |||||||||||||| |||||||| ||| ||||| ||||||||||||||||    
T  32045993 cattacttaaaagtgaaaaagtttcaaaataacgacaagggcaactcggtaaaagtatcactttctttctttcatttttacacttttcttaatctgtg 32046090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 475 - 559
Target Start/End: Original strand, 46371094 - 46371178
Alignment:
Q  475 tgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||| |||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  46371094 tgaaaaagtttcaaaataatgacaagggcaattcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 46371178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 28036841 - 28036743
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagt-aaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||  |||||||| ||||||||||| ||||    
T  28036841 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaaaatatcactctctttcttttatctttacacttttcttaatttgtg 28036743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 1207592 - 1207495
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| | ||||||| ||||| | |||||||| ||||| ||| ||||||||||||||||    
T  1207592 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcagtaaaaatatcattatctttctttcatctctacacttttcttaatctgtg 1207495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 8229223 - 8229321
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactc-tctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||| |||||||| | ||| || ||||||||| ||||||||||||||||    
T  8229223 cattacttaaaagtgaaaaagttttaaaataatgacaagggcaactcagtaaaaatatcactcttttttttttcatctttacacttttcttaatctgtg 8229321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 40562574 - 40562479
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||||| ||  |||||||||||||| |||||| ||| | ||||||| ||||| |||||||||| ||||||||| ||||||||||||||||    
T  40562574 cattacttaaaagtaaa--agtttcaaaataataacaagggcaattcagtaaaaatatcattctctttctttcatctttacacttttcttaatctgtg 40562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 364 - 464
Target Start/End: Complemental strand, 9129675 - 9129575
Alignment:
Q  364 ctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtggtcccca 463  Q
    ||||||| ||||||||||| || || |||| || ||||||||| |||| |||||| ||||||| | |||||||||||||||||| ||||||||||| |||    
T  9129675 ctatttgaaaaaaatatttatctcataatattttaccttctcagatttttaagcagaatttgataaatttaccccttataaatattttttgtggtctcca 9129576  T
Q  464 t 464  Q
    |    
T  9129575 t 9129575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 556
Target Start/End: Complemental strand, 9129542 - 9129447
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaa---agtatcactctctttcttacatctttactcttttcttaatct 556  Q
    ||||||||||||||||  |||||| |||||||| |||||||||| | ||||||   | ||||| ||||||||||  |||||||| ||||| |||||||    
T  9129542 cattacttaaaagtga--aagtttaaaaataataacaaggacaattgagtaaaaatattatcattctctttcttttatctttacacttttgttaatct 9129447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 50777300 - 50777264
Alignment:
Q  334 aactactccctccgtccctaaataagtgacctatttg 370  Q
    ||||||||||||||||||| |||||||||||||||||    
T  50777300 aactactccctccgtcccttaataagtgacctatttg 50777264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 46862856 - 46862823
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  46862856 tactccctccgtcccttaataagtgacctatttg 46862823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 47603809 - 47603764
Alignment:
Q  401 ttctcaaatttctaagcaaaatttgacagatttaccccttataaat 446  Q
    ||||||||||| |||||| |||||||||  ||||||||||||||||    
T  47603809 ttctcaaatttttaagcagaatttgacaagtttaccccttataaat 47603764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 366
Target Start/End: Original strand, 50876357 - 50876393
Alignment:
Q  330 tataaactactccctccgtccctaaataagtgaccta 366  Q
    |||||| |||||||||||||||||||||| |||||||    
T  50876357 tataaattactccctccgtccctaaataaatgaccta 50876393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 1e-58; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 27820773 - 27820900
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27820773 tactccctctgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatttacc 27820872  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  27820873 ccttataaatactttttgtggtccccat 27820900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 17493526 - 17493653
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  17493526 tacttcctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgatcttctcagatttctaaacaaaatttgacagatttacc 17493625  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  17493626 ccttataaatactttttgtggtccccat 17493653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 38070195 - 38070068
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  38070195 tactccctctgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttctaggcaaaatttgacagatttacc 38070096  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    | ||||||||||||||||||||||||||    
T  38070095 cattataaatactttttgtggtccccat 38070068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 11254500 - 11254627
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  11254500 tactccctccgtccctgaataagtgacctatttgtaaaaaaaaattgtcccacaatacttgaccttatcagatttctaagcaaaatttgacagatttacc 11254599  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    | ||||||||||||||||||||||||||    
T  11254600 ctttataaatactttttgtggtccccat 11254627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 18575028 - 18575155
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||| ||||| |    
T  18575028 tactccctccgtccctgaataagtgacctatttgtaaaaaaaaattgtcccacaatactcgaccttctcagatttctaagcaaaatttgacaaatttatc 18575127  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
     |||||||||||||||||||||||||||    
T  18575128 tcttataaatactttttgtggtccccat 18575155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 337 - 460
Target Start/End: Original strand, 39906911 - 39907033
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||| ||||||||||| ||||||||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39906911 tacttcctccgtccctgaataagtgatctatttataaaa-atatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatttacc 39907009  T
Q  437 ccttataaatactttttgtggtcc 460  Q
    ||||||||||||||||||||||||    
T  39907010 ccttataaatactttttgtggtcc 39907033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 17336270 - 17336143
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    ||||||||||||| || ||||  ||||||||||  ||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||    
T  17336270 tactccctccgtctctcaatacttgacctattttgaaaaaatatttgtcccataatacttgaccttcttagatttctaagcagaatttgacagatttacc 17336171  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    |||||||||||||||||||||| |||||    
T  17336170 ccttataaatactttttgtggttcccat 17336143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 9753770 - 9753892
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||  ||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  9753770 tactccctccgtccctcaatacttgacctatttaaaaaaaatatttgtcccataatacttgaccttctcaaatttctaagcagaatttgacaaatttacc 9753869  T
Q  437 ccttataaatactttttgtggtc 459  Q
     |||||||||| |||||||||||    
T  9753870 tcttataaatattttttgtggtc 9753892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 17493686 - 17493783
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  17493686 cattacttaaaaatgaaaaagtttcaaaataatgacaagggcaacttagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 17493783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 18575188 - 18575285
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  18575188 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatttgtg 18575285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 27820933 - 27821030
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  27820933 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatctttacacttttcttaatctgtg 27821030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 462 - 554
Target Start/End: Original strand, 11254660 - 11254752
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaat 554  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| |||||||||||    
T  11254660 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaat 11254752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 340 - 464
Target Start/End: Complemental strand, 12738663 - 12738539
Alignment:
Q  340 tccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacccct 439  Q
    |||||||||| || ||||  ||| ||||||| ||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||| ||||||||||    
T  12738663 tccctccgtctctcaatacttgatctatttggaaaaaatatttgtcccataatacttgaccttatcagatttctaagcagaatttgacaaatttacccct 12738564  T
Q  440 tataaatactttttgtggtccccat 464  Q
    |||||||| |||||||| |||||||    
T  12738563 tataaatattttttgtgatccccat 12738539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 13243846 - 13243724
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||| ||||||||| ||||  | || |||||| ||||||||| |||| ||||||| |||||||||||||||||||||||| ||||||||| ||| |||    
T  13243846 tactccatccgtccctcaatacttaacttatttggaaaaaatatatgtctcacaatatttgaccttctcaaatttctaagcagaatttgacaaattcacc 13243747  T
Q  437 ccttataaatactttttgtggtc 459  Q
    |||||||||||||||||||||||    
T  13243746 ccttataaatactttttgtggtc 13243724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 38070035 - 38069938
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  38070035 cattacttaaaaatgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactatctttctttcatctttacacttttcttaatctgtg 38069938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 39907068 - 39907165
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| || |||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  39907068 cattacttaaaagtgaaaaaatttcaaaataatgataagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 39907165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 12738506 - 12738409
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| | ||||||| ||||| | ||||||||  |||||||| ||||||||||||||||    
T  12738506 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcagtaaaaatatcattatctttcttttatctttacacttttcttaatctgtg 12738409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 462 - 542
Target Start/End: Complemental strand, 17336110 - 17336030
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttac 542  Q
    ||||||||||||||||| |||||||||||||||||||||||||  | ||||||| ||||| |||||||||| |||||||||    
T  17336110 cattacttaaaagtgaaaaagtttcaaaataatgacaaggacagttcagtaaaaatatcattctctttctttcatctttac 17336030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 9753930 - 9754026
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatga-caaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||||||||   ||||||||||||| | ||||||||| | ||||||| ||||| | |||||||| ||||||||| ||||||||||||||||    
T  9753930 cattacttaaaagtgaag--gtttcaaaataattaacaaggacaattcagtaaaaatatcattatctttctttcatctttacacttttcttaatctgtg 9754026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 11146770 - 11146877
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||| ||||||| | ||||||||| |||||||||||||| | ||||  || ||||||||||||| ||||||||  || ||||||||||||  |||||     
T  11146770 tactccttccgtccttgaataagtgatctatttgtaaaaaaaaattgtttcaaaatacttgaccttatcaaattttaaaacaaaatttgacaattttact 11146869  T
Q  437 ccttataa 444  Q
    ||||||||    
T  11146870 ccttataa 11146877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 559
Target Start/End: Original strand, 11147829 - 11147906
Alignment:
Q  482 gtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||| |||||||| | |||| ||| | ||||||| ||||| |||||| ||| ||||||||| ||||||||||||||||    
T  11147829 gtttaaaaataataataagggcaattcagtaaaaatatcattctcttcctttcatctttacacttttcttaatctgtg 11147906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 555
Target Start/End: Complemental strand, 13243686 - 13243594
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatga-caaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatc 555  Q
    |||||||||||| ||||   ||||||||||||| | ||||||||| | ||||||| ||||| | ||||||||  |||||||| ||||||||||||    
T  13243686 cattacttaaaaatgaag--gtttcaaaataattaacaaggacaattcagtaaaaatatcattatctttcttttatctttacacttttcttaatc 13243594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 20244683 - 20244743
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgac 399  Q
    |||||||||||||||  ||||||  ||| ||||||||||||||||||||||| |||| |||||    
T  20244683 tactccctccgtcccataataag--acccatttgtaaaaaatatttgtcccaaaataattgac 20244743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 20248478 - 20248418
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgac 399  Q
    |||||||||||||||  ||||||  ||| ||||||||||||||||||||||| |||| |||||    
T  20248478 tactccctccgtcccataataag--acccatttgtaaaaaatatttgtcccaaaataattgac 20248418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 11254800 - 11254767
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  11254800 tactccctccgtccctgaataagtgacctatttg 11254767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 17493826 - 17493793
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  17493826 tactccctccgtccctgaataagtgacctatttg 17493793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 18575328 - 18575295
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  18575328 tactccctccgtccctgaataagtgacctatttg 18575295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 1e-58; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 36982186 - 36982313
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  36982186 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcatatttctaggcaaaatttgacagatttacc 36982285  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  36982286 ccttataaatactttttgtggtccccat 36982313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 14044056 - 14044183
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  14044056 tactccctccgtccctgaataagtgacctatttgtaaaaaatatttgtcccataatatttgaccttctcagatttctaagcaaaatttgacagatttacc 14044155  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
     |||||||||||||||||||||||||||    
T  14044156 tcttataaatactttttgtggtccccat 14044183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 335 - 459
Target Start/End: Complemental strand, 2970966 - 2970842
Alignment:
Q  335 actactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagattta 434  Q
    |||||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||    
T  2970966 actactccctccgtccctcaatacttgacctatttgaaaaaaatatttgtcccacaatacttgacattctcaaatttctaagcagaatttgacaaattta 2970867  T
Q  435 ccccttataaatactttttgtggtc 459  Q
    |||| ||||||||||||||||||||    
T  2970866 ccccgtataaatactttttgtggtc 2970842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 42897668 - 42897547
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||| ||||||| ||||||||||      ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42897668 tactcccttcgtccctgaataagtgac------gtaaaaaatatttgtcccacaatacttgaccttctcagatttctaagcaaaatttgacagatttacc 42897575  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  42897574 ccttataaatactttttgtggtccccat 42897547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 42897514 - 42897417
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  42897514 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 42897417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 36982346 - 36982443
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  36982346 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctttttctttcatctttacacttttcttaatctgtg 36982443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 33403194 - 33403301
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| ||||||||| |||||||||||||| | |||||| | ||||||||||||||||||||||  |||||||||||||||  ||||||    
T  33403194 tactccctccgtccctgaataagtgatctatttgtaaaaaaaaattgtcctaaaatacttgaccttctcaaattttaaagcaaaatttgacaattttacc 33403293  T
Q  437 ccttataa 444  Q
    ||||||||    
T  33403294 ccttataa 33403301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 462 - 554
Target Start/End: Original strand, 14044216 - 14044307
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaat 554  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  14044216 cattatttaaaagtgaaaaagtttcaaaataatgacaagggcaacttagt-aaagtatcactctctttctttcatctttacacttttcttaat 14044307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 337 - 444
Target Start/End: Complemental strand, 36768889 - 36768782
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||||||||| |  |||| | |||||||| |||||| |||||| ||||||||  |||||||||||||||  ||||||    
T  36768889 tactccctccgtccctgaataagtgacctatttttttaaaaaaattgtcccaaaatactcgaccttatcaaattttaaagcaaaatttgacaattttacc 36768790  T
Q  437 ccttataa 444  Q
    ||||||||    
T  36768789 ccttataa 36768782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 482 - 559
Target Start/End: Original strand, 33404409 - 33404486
Alignment:
Q  482 gtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||| |||||||| | |||| ||| | ||||||| |||||||||||||||| |||||||||  |||||||||||||||    
T  33404409 gtttaaaaataataataagggcaattcagtaaaaatatcactctctttctttcatctttacatttttcttaatctgtg 33404486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 36768014 - 36767919
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||| |||||||||||   |||| |||||||| | |||| ||| | ||||||| |||||||||||||||| ||||||||| || || ||||||||||    
T  36768014 cattatttaaaagtgaag--gtttaaaaataataataagggcaattcagtaaaaatatcactctctttctttcatctttacactctttttaatctgtg 36767919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 2970805 - 2970709
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatga-caaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||||||||   ||||||||||||| | ||||| ||| | ||| ||| ||||| | |||||||| |||||||||  |||||||||||||||    
T  2970805 cattacttaaaagtgaag--gtttcaaaataattaacaagggcaattcagtgaaaatatcattatctttctttcatctttacatttttcttaatctgtg 2970709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 559
Target Start/End: Original strand, 5712600 - 5712673
Alignment:
Q  486 caaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||| | |||| ||| | || |||| ||||||| |||||||| |||||||||  |||||||||||||||    
T  5712600 caaaataataataagggcaattcagaaaaaatatcactttctttctttcatctttacatttttcttaatctgtg 5712673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 14044355 - 14044322
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  14044355 tactccctccgtccctgaataagtgacctatttg 14044322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 36982486 - 36982453
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  36982486 tactccctccgtccctgaataagtgacctatttg 36982453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 366
Target Start/End: Complemental strand, 40512941 - 40512912
Alignment:
Q  337 tactccctccgtccctaaataagtgaccta 366  Q
    ||||||||||||||||||||||||||||||    
T  40512941 tactccctccgtccctaaataagtgaccta 40512912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 42897374 - 42897407
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  42897374 tactccctccgtccctgaataagtgacctatttg 42897407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 366
Target Start/End: Original strand, 5364421 - 5364449
Alignment:
Q  338 actccctccgtccctaaataagtgaccta 366  Q
    |||||||||||||||||||||||||||||    
T  5364421 actccctccgtccctaaataagtgaccta 5364449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 5712261 - 5712317
Alignment:
Q  372 aaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgaca 428  Q
    |||||| | |||||| | |||| |||||||||||||||||  |||||||||||||||    
T  5712261 aaaaaaaaattgtcctaaaataattgaccttctcaaattttaaagcaaaatttgaca 5712317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 366
Target Start/End: Complemental strand, 37304413 - 37304377
Alignment:
Q  330 tataaactactccctccgtccctaaataagtgaccta 366  Q
    |||| |||||||||||||||||| |||||||||||||    
T  37304413 tatatactactccctccgtccctgaataagtgaccta 37304377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 110; Significance: 4e-55; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 337 - 462
Target Start/End: Original strand, 69753 - 69878
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  69753 tactccctccgtccctgaataagtgacatatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 69852  T
Q  437 ccttataaatactttttgtggtcccc 462  Q
     ||||||||||||||||||| |||||    
T  69853 gcttataaatactttttgtgatcccc 69878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 462 - 558
Target Start/End: Original strand, 69913 - 70009
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgt 558  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||| |||||||||||||||    
T  69913 cattacttaaaagtgaaaaagtttcaaaataatgacaaggacaactcagtaaaattatcactctctttctttcatctttacacttttcttaatctgt 70009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 70053 - 70020
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    ||||||||||||||||||||||||||| ||||||    
T  70053 tactccctccgtccctaaataagtgacttatttg 70020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 4e-55; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 1241107 - 1241236
Alignment:
Q  335 actactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagattta 434  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  1241107 actactccctccgtccctgaataagtgatctatttgtaaaaaatatttgtcccacaatacttgaacttctcagatttctaagcaaaatttgacagattta 1241206  T
Q  435 ccccttataaatactttttgtggtccccat 464  Q
    || |||||||||||||||||||||||||||    
T  1241207 cctcttataaatactttttgtggtccccat 1241236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 13041972 - 13042096
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  13041972 tactccctccgtccttgaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcagatttttaagcaaaatttgacagatttacc 13042071  T
Q  437 ccttataaatactttttgtggtccc 461  Q
    |||||||||||||||||||||||||    
T  13042072 ccttataaatactttttgtggtccc 13042096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 28541887 - 28541760
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    ||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  28541887 tactccctccgtctctgaataagtgacttatttgtaaaaaatatttatcccacaatacttgaccttctcagatttctaggcaaaatttgacagatttacc 28541788  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  28541787 ccttataaatactttttgtggtccccat 28541760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 337 - 458
Target Start/End: Original strand, 16435779 - 16435900
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16435779 tacttcctccgtccctaaataaatgacttatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaaggaaaatttgacagatttacc 16435878  T
Q  437 ccttataaatactttttgtggt 458  Q
    || |||||||||||||||||||    
T  16435879 ccatataaatactttttgtggt 16435900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 337 - 460
Target Start/End: Original strand, 12350272 - 12350395
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||| |||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12350272 tacttcctccgtctctgaataagtgacctatttgtaaaaagtatttgtcccacaatatttgaccttctcaaatttctaagcaaaatttgacagatttacc 12350371  T
Q  437 ccttataaatactttttgtggtcc 460  Q
    ||||||| ||||||||||||||||    
T  12350372 ccttatatatactttttgtggtcc 12350395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 29182589 - 29182715
Alignment:
Q  335 actactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagattta 434  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  29182589 actactccctctgtccctgaataagtgacctatttgtaaaaaatatttgtcctacaatacttgaccttctcagatttctaggcaaaatttgacagattta 29182688  T
Q  435 ccccttataaatactttttgtggtccc 461  Q
    || ||||||||||| ||||||||||||    
T  29182689 cctcttataaatacattttgtggtccc 29182715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 30736419 - 30736546
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||| ||||||||||| ||||  ||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  30736419 tacttcctccgtccctcaatacttgacctatttgaaaaaaatatttgtcccacaatatttgatcttctcagatttctaagcaaaatttgacagatttacc 30736518  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    |||||||||||||||||||  |||||||    
T  30736519 ccttataaatactttttgtaatccccat 30736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 7271379 - 7271251
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaa-tatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttac 435  Q
    ||||| |||| ||||| ||||  ||||||||||| |||||| ||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||    
T  7271379 tactcactccatccctcaatacttgacctatttgaaaaaaaatatttgtcccataatacttgaccttcttagatttctaagcagaatttgacagatttac 7271280  T
Q  436 cccttataaatactttttgtggtccccat 464  Q
    |||||||||||||||||||| ||||||||    
T  7271279 cccttataaatactttttgttgtccccat 7271251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 12350432 - 12350529
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  12350432 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagcatcactctctttctttcatctttacacttttcttaatctgtg 12350529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 28541727 - 28541630
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  28541727 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaacccagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtg 28541630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 29182751 - 29182848
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||||| |||||||||  |||||||||||||||    
T  29182751 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaaatatcactctctttctttcatctttacatttttcttaatctgtg 29182848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 30736579 - 30736676
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | ||||||| ||||| |||||||||| ||||||||| ||||||||||||||||    
T  30736579 cattacttaaaagtgaaaaagtttcaaaataatgacaaggacaattcagtaaaaatatcattctctttctttcatctttacacttttcttaatctgtg 30736676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 337 - 456
Target Start/End: Original strand, 1870533 - 1870653
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaa-aatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttac 435  Q
    |||| ||||||||||| ||||  ||||||||||| |||| ||||||||| | ||||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  1870533 tacttcctccgtcccttaatacttgacctatttggaaaaaaatatttgttcaacaatacttgaccttctcagatttttaagcagaatttgacaaatttac 1870632  T
Q  436 cccttataaatactttttgtg 456  Q
    |||||||||||||||||||||    
T  1870633 cccttataaatactttttgtg 1870653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 360 - 464
Target Start/End: Complemental strand, 31013772 - 31013668
Alignment:
Q  360 tgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtggtc 459  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||| |||||||| |||||| |||||||||||| ||||||||| |    
T  31013772 tgacctatttgaaaaaaatatttgttccacaatacttgatcttctcagatttctaagcagaatttgacggatttatcccttataaatattttttgtggcc 31013673  T
Q  460 cccat 464  Q
    |||||    
T  31013672 cccat 31013668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 7271218 - 7271121
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| | ||||||| ||||| ||| |||||| ||||||||| ||||||||||||||||    
T  7271218 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcagtaaaaatatcattctatttctttcatctttacacttttcttaatctgtg 7271121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 346 - 455
Target Start/End: Complemental strand, 31833856 - 31833747
Alignment:
Q  346 cgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaa 445  Q
    ||||||| ||||  ||| ||||||| |||||||||||||||||| |||||||||||||||| |||| |||||| ||||||||| ||||| |||||| |||    
T  31833856 cgtccctcaatacttgatctatttgaaaaaaatatttgtcccacgatacttgaccttctcagatttttaagcataatttgacaaatttatcccttaaaaa 31833757  T
Q  446 tactttttgt 455  Q
    ||||||||||    
T  31833756 tactttttgt 31833747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 16435939 - 16436032
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||    ||||||| ||||||||| ||||||||||||||||    
T  16435939 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatca----ctttctttcatctttacacttttcttaatctgtg 16436032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 1241269 - 1241365
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||| ||| |||||  |||||||||| ||||    
T  1241269 cattacttaaaa-tgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactttctttctttcatttttacatttttcttaatttgtg 1241365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 13210390 - 13210471
Alignment:
Q  383 gtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtggtccccat 464  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  13210390 gtccctcaatacttgaccttctcaaatttttaagcagaatttgacaaatttacccattataaatattttttgtggtctccat 13210471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 13042132 - 13042227
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| || |||  |||||||||||||| ||||| ||||||| |||||||||||||||| ||||||||| ||||| ||||||||||    
T  13042132 cattacttaaaagtgaa-aattttttaaataatgacaagggcaactcagtaaaaatatcactctctttctttcatctttacactttt-ttaatctgtg 13042227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 462 - 558
Target Start/End: Complemental strand, 31013635 - 31013539
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgt 558  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||| | ||||||| ||||| | |||||||| | | ||||| |||||||||||||||    
T  31013635 cattacttaaaagtgaaaaagtttcaaaataatgataagggcaattcagtaaaaatatcattatctttctttcgtttttacacttttcttaatctgt 31013539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 559
Target Start/End: Original strand, 13210506 - 13210598
Alignment:
Q  464 ttacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||||||  |||||||||||| | |||||| | | | |||||||  |||| |||||||||| ||||||||| ||||||||||||||||    
T  13210506 ttacttaaaagtgaa--agtttcaaaata-taacaagggcgattcagtaaaataatcattctctttctttcatctttacacttttcttaatctgtg 13210598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 1870694 - 1870788
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||||||||   | ||||||||||| |||||| ||| ||||||||| ||||| || ||||||| ||||||||  |||||| |||||||||    
T  1870694 cattacttaaaagtgaag--gcttcaaaataataacaagggcaatttagtaaaaatatcattccctttctttcatctttatacttttc-taatctgtg 1870788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 28541587 - 28541620
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    ||||||||||||||||||||||||||||||||||    
T  28541587 tactccctccgtccctaaataagtgacctatttg 28541620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 12350572 - 12350539
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||| |||||||||||||||||||    
T  12350572 tactccctccgtccataaataagtgacctatttg 12350539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 16436075 - 16436042
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  16436075 tactccctccgtccctgaataagtgacctatttg 16436042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 31833726 - 31833634
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    |||||||||||| ||||   |||||||||||||   |||| ||| ||||||||| ||||| | | |||||| ||||||||| ||||||||||| ||||    
T  31833726 cattacttaaaaatgaag--gtttcaaaataat---aagggcaatttagtaaaaatatcattatttttctttcatctttacacttttcttaatttgtg 31833634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 108; Significance: 6e-54; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 10317 - 10190
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  10317 tactccctccgttcctgaataagtgatctatttgtaaaaaatatttgtcccacaatacttgaccttctcatatttctaagcaaaatttgacagatttatc 10218  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    ||||||||||||||||||||||||||||    
T  10217 ccttataaatactttttgtggtccccat 10190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 10157 - 10060
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||  |||||||| ||||||||||||||||    
T  10157 cattacttaaaagtgaaaaagtttcaaaataataacaagggcaactcagtaaaaatatcactctctttcttttatctttacacttttcttaatctgtg 10060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 337 - 464
Target Start/End: Complemental strand, 10893 - 10766
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttacc 436  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  10893 tactccctccgtccctgaataagtgacctatttgtaaaaaaaaattgtcccacaatacttgaccttatcagatttctaagcaaaatttgacagatttacc 10794  T
Q  437 ccttataaatactttttgtggtccccat 464  Q
    | ||||||||||||||||||||||||||    
T  10793 ctttataaatactttttgtggtccccat 10766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 10733 - 10641
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaat 554  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| |||||||||||    
T  10733 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaat 10641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 10593 - 10626
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttg 370  Q
    |||||||||||||||| |||||||||||||||||    
T  10593 tactccctccgtccctgaataagtgacctatttg 10626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 3834 - 3937
Alignment:
Q  357 aagtgacctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttaccccttataaatactttttgtg 456  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  3834 aagtgacctatttgtaaaaaatatttgtcccataatacttgaccttctcagatttctaagcaaaatttgacagatttacctcttataaatactttttgcg 3933  T
Q  457 gtcc 460  Q
    ||||    
T  3934 gtcc 3937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 462 - 559
Target Start/End: Original strand, 3974 - 4071
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatctgtg 559  Q
    ||||||||||||||||| |||||| |||||||||||||||  |||| |||||||||| | |||| ||| || ||||||||| ||||||||||||||||    
T  3974 cattacttaaaagtgaaaaagttttaaaataatgacaagggtaactcagtaaaagtagcgctctttttttttcatctttacccttttcttaatctgtg 4071  T

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Target: scaffold1194 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold1194
Description:

Target: scaffold1194; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 337 - 464
Target Start/End: Original strand, 978 - 1106
Alignment:
Q  337 tactccctccgtccctaaataagtga-cctatttgtaaaaaatatttgtcccacaatacttgaccttctcaaatttctaagcaaaatttgacagatttac 435  Q
    ||||||||| |||||| ||||  ||| |||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||||  |||||||| ||||||    
T  978 tactccctcagtccctcaatacttgaacctatttggaaaaaatatttgtcccacaatacttgagcttctcagatttttaagcaggatttgacaaatttac 1077  T
Q  436 cccttataaatactttttgtggtccccat 464  Q
    |||||||||||||||||||||||| ||||    
T  1078 cccttataaatactttttgtggtctccat 1106  T

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Target: scaffold1194; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 542
Target Start/End: Original strand, 1130 - 1208
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttac 542  Q
    |||||||||||||||||   ||||||||||||| |||||  ||| | ||||||| ||||| |||||||||| |||||||||    
T  1130 cattacttaaaagtgaag--gtttcaaaataataacaagagcaattcagtaaaaatatcattctctttctttcatctttac 1208  T

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Target: scaffold0016 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 462 - 556
Target Start/End: Complemental strand, 92309 - 92215
Alignment:
Q  462 cattacttaaaagtgaacaagtttcaaaataatgacaaggacaacttagtaaaagtatcactctctttcttacatctttactcttttcttaatct 556  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||| |||||||||||||    
T  92309 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtgtcactctctttctttcatctttacacttttcttaatct 92215  T

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Target: scaffold0016; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 92420 - 92374
Alignment:
Q  337 tactccctccgtccctaaataagtgacctatttgtaaaaaatatttg 383  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||    
T  92420 tactccctccgtctctgaataagtgatctatttgtaaaaaatatttg 92374  T

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Target: scaffold0459 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 366
Target Start/End: Original strand, 12752 - 12781
Alignment:
Q  337 tactccctccgtccctaaataagtgaccta 366  Q
    ||||||||||||||||||||||||||||||    
T  12752 tactccctccgtccctaaataagtgaccta 12781  T

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Target: scaffold0366 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 366
Target Start/End: Original strand, 10393 - 10422
Alignment:
Q  337 tactccctccgtccctaaataagtgaccta 366  Q
    ||||||||||||||||||||||||||||||    
T  10393 tactccctccgtccctaaataagtgaccta 10422  T

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Target: scaffold0366; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 366
Target Start/End: Original strand, 14059 - 14088
Alignment:
Q  337 tactccctccgtccctaaataagtgaccta 366  Q
    ||||||||||||||||||||||||||||||    
T  14059 tactccctccgtccctaaataagtgaccta 14088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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