View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11036_high_46 (Length: 325)
Name: NF11036_high_46
Description: NF11036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11036_high_46 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 50 - 312
Target Start/End: Complemental strand, 30144157 - 30143896
Alignment:
| Q |
50 |
taattgaatgtaatctggatatagtgttggtgtccaaccctgacacgtgtcgaacacgggacaaaaaagctaatatatagttgacattgcatgagaaaat |
149 |
Q |
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| T |
30144157 |
taattgaatgtaatctggatatagtgttggtgtccgaccctgacacgtgtcgaacaccgga-aacaaagctaatatatagttgacattgcatgagaaaat |
30144059 |
T |
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| Q |
150 |
gcacgatctcaagttacaaagcaatatacctgaagaagaagcatcatgaatggaacgatcttgagcgtccaaataaactgaattatcactaaatgaagag |
249 |
Q |
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| T |
30144058 |
gcacgatctcaagttacaaagcaatatacctgaagaagaagcatcatgaacggaacgatcttgagcgtccaaataaactgaattatcactaaatgaagag |
30143959 |
T |
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| Q |
250 |
tctgaacggttgaaattatcattactcgccattttggaagaacgaagaaggaacgaaaaatgt |
312 |
Q |
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| T |
30143958 |
tctgaacggttgaaattatcattactcgccattttggaagaacgaagaaggaacgaaaaatgt |
30143896 |
T |
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