View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11036_low_48 (Length: 319)
Name: NF11036_low_48
Description: NF11036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11036_low_48 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 37186278 - 37186565
Alignment:
| Q |
1 |
agcctaaatatgtttttagttttataaaaaagcctaaatatgtttagtattttgttttgatatgattcaaaaatcaaaattatgacaaccaactcttgga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
37186278 |
agcctaaatatgtttttagttttataaaaaagcctaaatatgtttagtattttgttttgatatgattcaaaaatcaaaattatgacaaccgactcttgga |
37186377 |
T |
|
| Q |
101 |
ttagagcacgtgactatgaatcaggatgtatgtcaggagttcgaatccctccagcaaatagggaaagatttgggggtaagaaaacaattatgaattatga |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37186378 |
ttagagcacgtgactatgaatcacgatgtatgtcaggagttcgaatccctccagcaaatagggaaagatttgggggtaagaaaacaattatgaattatga |
37186477 |
T |
|
| Q |
201 |
tcaggttaatggaagcaaagctatggaacatccataggttctttcaagctatcactnnnnnnnctatggaaactaagattataactaa |
288 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||| |
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| T |
37186478 |
tcaggttaatggaagcaaagctatggaacatccataggttctttcaagctatcgctaaaaaaactatggaaactaagattgtaactaa |
37186565 |
T |
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