View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11036_low_88 (Length: 232)
Name: NF11036_low_88
Description: NF11036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11036_low_88 |
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Alignment Details
Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 30746653 - 30746849
Alignment:
| Q |
16 |
gacatcatgttcaagaggtccaaaaacctacaatgtggaatttcccagccagatccaactacccgcgtttccacccgcctagcaaaggaagaagaagtcg |
115 |
Q |
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| T |
30746653 |
gacatcatgttcaagaggtccaaaaacctacaatgtggaatttcccagccagatccaactacccgcgtttccacccgcctagcaaag---gaagaagtcg |
30746749 |
T |
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| Q |
116 |
agtgaagttaatgtgtcacatcatcttcttagagctaaccaaacaccaccatagcaggcaatcatatcctactacatgtcatcacaaacacaacacctca |
215 |
Q |
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||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
30746750 |
agtgaagttaatgtgtcacatcatcttgttag-cctaaccaaacaccactatagcaggcaatcatatcctactacatgtcatcaaaaacacaacacctca |
30746848 |
T |
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