View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11037_high_3 (Length: 254)
Name: NF11037_high_3
Description: NF11037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11037_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 31674333 - 31674093
Alignment:
| Q |
1 |
ttttagtggaagccaaactgaaattcacgtaacaagaatttttaagtaaaaccgtgaaattagcttgttttctggccattcatatttaaccgttttgatt |
100 |
Q |
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| T |
31674333 |
ttttagtggaagccaaactgaaattcacgtaacaagaatttttaagtaaaaccgtgaaattagcttgttttctggtcattcatatttaaccgttttgatt |
31674234 |
T |
|
| Q |
101 |
ttaaggaattctaaaagtaaaactagtcaccacattagtgnnnnnnnnttcttgttgatacgtaaaacctttttattttaactgttttcggtaatgttgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31674233 |
ttaaggaattctaaaagtaaaactagtcaccacattagtg-aaaaaaattcttgttgatacgtaaaacctttttattttaactgttttcggtaatgttgt |
31674135 |
T |
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| Q |
201 |
aagaaaaagtctttcggtaaaatcggtaataaccttcttctc |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
31674134 |
aagaaaaagtctttcggtaaaatcggtaataaccttcttctc |
31674093 |
T |
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