View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11039_high_27 (Length: 241)
Name: NF11039_high_27
Description: NF11039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11039_high_27 |
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Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 33701274 - 33701497
Alignment:
| Q |
1 |
agtagattgatcttcaaaaataccaacatatgaaaatttaaaatttagtttttccaaatgtcggatactttcgagaaccaatgcaccaaaagttattaca |
100 |
Q |
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| T |
33701274 |
agtagattgatcttcaaaaataccaacatatgaaaatttaaaatttagtttttccaaatgtcggatactttcgagaaccaatgcaccaaaagttattaca |
33701373 |
T |
|
| Q |
101 |
taccataaccacttttataaactaagtggagatcgcataatatacatttcatttttgggtctaaacagttgcagcataagggtgttttataagtaaatct |
200 |
Q |
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||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
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| T |
33701374 |
tactataaccacttttataaactaagtggagatagcataatatacatttcatttttgggtctaaacagttgcagcacaagggtcttttataagtaaatct |
33701473 |
T |
|
| Q |
201 |
tcttattgttgtttaagcactatt |
224 |
Q |
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|||||| ||||||||||||||||| |
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| T |
33701474 |
tcttatcgttgtttaagcactatt |
33701497 |
T |
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