View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11039_low_19 (Length: 317)
Name: NF11039_low_19
Description: NF11039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11039_low_19 |
 |  |
|
| [»] scaffold1439 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 282; Significance: 1e-158; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 22 - 311
Target Start/End: Original strand, 22620962 - 22621251
Alignment:
| Q |
22 |
caacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatccatggtccatacatc |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22620962 |
caacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatctatggtccatacatc |
22621061 |
T |
 |
| Q |
122 |
atcaaatacaaaaacatacctcttttgttgcaagtggtttctcaacttagaaatcaatgaccctagatccatttcagagatatcttgagaagggtcgtct |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22621062 |
atcaaatacaaaaacatacctcttttgttgcaagtggtttctcaacttagaaatcaatgaccctagatccatttcagagatatcttgagaagggtcgtct |
22621161 |
T |
 |
| Q |
222 |
cctttttgttggtaaatctccttcaacatgtatctcagcaacccctctatattgtatgattgtgacactgtgacccatacacgatattcg |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22621162 |
cctttttgttggtaaatctccttcaacatgtatctcagcaacccctctatatcgtatgattgtgacactgtgacccatacacgatattcg |
22621251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 22 - 310
Target Start/End: Original strand, 22657114 - 22657402
Alignment:
| Q |
22 |
caacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatccatggtccatacatc |
121 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||||||||| |||| ||| ||| || || |||| ||||||| || |||||||||| |
|
|
| T |
22657114 |
caacatccatatttcttgttgtaataaatatcttactcccatttttatgatcaccaacagcatattcaatctcatcccaaaaacttttgttccatacatc |
22657213 |
T |
 |
| Q |
122 |
atcaaatacaaaaacatacctcttttgttgcaagtggtttctcaacttagaaatcaatgaccctagatccatttcagagatatcttgagaagggtcgtct |
221 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||| ||||||| || ||||||||||| ||| |||||||||||| ||||||||||| ||| | |||| |
|
|
| T |
22657214 |
atcaaacacaaaaacatacctctttttctgcaagtattttctcagctcagaaatcaatgcgcctcgatccatttcagtgatatcttgaggaggattgtct |
22657313 |
T |
 |
| Q |
222 |
cctttttgttggtaaatctccttcaacatgtatctcagcaacccctctatattgtatgattgtgacactgtgacccatacacgatattc |
310 |
Q |
| |
|
|||||||||| ||||| ||||||||||||| ||||| |||| | ||||||||||| |||||||||||||||| ||| |||||| |||| |
|
|
| T |
22657314 |
cctttttgtttgtaaagctccttcaacatgcgtctcaacaacacttctatattgtaagattgtgacactgtgatccaaacacgacattc |
22657402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 132 - 310
Target Start/End: Original strand, 22648317 - 22648494
Alignment:
| Q |
132 |
aaaacatacctcttttgttgcaagtggtttctcaacttagaaatcaatgaccctagatccatttcagagatatcttgagaagggtcgtctcctttttgtt |
231 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| || ||||||||| |||||| |||||||| |||||| ||| || ||| || ||||||||||||| |
|
|
| T |
22648317 |
aaaacatacctcttttgttgcaagtagtttctcagctcagaaatcaacgaccctc-atccattttcgagatacctttaggaggctcttctcctttttgtt |
22648415 |
T |
 |
| Q |
232 |
ggtaaatctccttcaacatgtatctcagcaacccctctatattgtatgattgtgacactgtgacccatacacgatattc |
310 |
Q |
| |
|
||||| ||| ||||||||| |||||||||||| ||| ||| ||||||||| ||||| ||| |||||||||| |||| |
|
|
| T |
22648416 |
tgtaaagctcattcaacatgcctctcagcaacccttctgtatagtatgattgcaacactttgatccatacacgaaattc |
22648494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 22615316 - 22615457
Alignment:
| Q |
22 |
caacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatccatggtccatacatc |
121 |
Q |
| |
|
||||||| ||| | |||||||| || ||||||||||| ||||||||||||||||| ||| || || || ||||||||||||| |||| |||||||||| |
|
|
| T |
22615316 |
caacatctatattccttgttgttataaatatcttacttccatttttattatcaattacagcagattcaatctcattccaaaaatgcatgttccatacatc |
22615415 |
T |
 |
| Q |
122 |
atcaaatacaaaaacatacctcttttgttgcaagtggtttct |
163 |
Q |
| |
|
|||||| |||| ||| ||||||||||| ||||||| |||||| |
|
|
| T |
22615416 |
atcaaacacaacaacgtacctcttttgctgcaagtagtttct |
22615457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 22648232 - 22648288
Alignment:
| Q |
22 |
caacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaatca |
78 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
22648232 |
caacatccatatttcttgttgtaataaatatcttactcccatttttattatcaatca |
22648288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 22034936 - 22034881
Alignment:
| Q |
21 |
acaacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaat |
76 |
Q |
| |
|
||||||||||| |||||||||| || ||||||||||| ||||||||| ||||||| |
|
|
| T |
22034936 |
acaacatccatgtttcttgttgttataaatatcttacttccatttttactatcaat |
22034881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 22115504 - 22115449
Alignment:
| Q |
21 |
acaacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaat |
76 |
Q |
| |
|
||||||||||| |||||||||| || ||||||||||| ||||||||| ||||||| |
|
|
| T |
22115504 |
acaacatccatgtttcttgttgttataaatatcttacttccatttttactatcaat |
22115449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 22458537 - 22458680
Alignment:
| Q |
22 |
caacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatccatggtccatacatc |
121 |
Q |
| |
|
|||||||||| |||||||||| || |||||||||| || |||||||||||||||| | || | || |||| |||||||| | | |||||||||| |
|
|
| T |
22458537 |
caacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagctccatacatc |
22458636 |
T |
 |
| Q |
122 |
atcaaatacaaaaacatacctcttttgttgcaagtggtttctca |
165 |
Q |
| |
|
|||||| || | ||||||||| |||| ||||||| ||| |||| |
|
|
| T |
22458637 |
atcaaaaactataacataccttttttcctgcaagtagttcctca |
22458680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 22481518 - 22481661
Alignment:
| Q |
22 |
caacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatccatggtccatacatc |
121 |
Q |
| |
|
|||||||||| |||||||||| || |||||||||| || |||||||||||||||| | || | || |||| |||||||| | | |||||||||| |
|
|
| T |
22481518 |
caacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagctccatacatc |
22481617 |
T |
 |
| Q |
122 |
atcaaatacaaaaacatacctcttttgttgcaagtggtttctca |
165 |
Q |
| |
|
|||||| || | ||||||||| |||| ||||||| ||| |||| |
|
|
| T |
22481618 |
atcaaaaactataacataccttttttcctgcaagtagttcctca |
22481661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 305
Target Start/End: Original strand, 30989365 - 30989636
Alignment:
| Q |
34 |
ttcttgttgtaatcaatatcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatccatggtccatacatcatcaaatacaaa |
133 |
Q |
| |
|
|||||||||| || ||||||||||| ||||||||||||||||| ||| || || || |||| |||||||| | |||| ||||||||||| |||| |
|
|
| T |
30989365 |
ttcttgttgtgataaatatcttacttccatttttattatcaattacagcaaattcaatatcatcccaaaaatgtacactccaaacatcatcaaacacaac |
30989464 |
T |
 |
| Q |
134 |
aacatacctcttttgttgcaagtggtttctcaacttagaaatcaatgaccctagatccatttcagagatatcttgagaagggtcgtctcctttttgttgg |
233 |
Q |
| |
|
|||||||| ||| |||||| |||||||| | | | ||||||||||| ||||||||| | | ||||| | || ||| || ||| | ||||||| | |
|
|
| T |
30989465 |
gacatacctttttaaccgcaagtagtttctcacttcatcagtcaatgaccctcgatccatttgaaaaatatccttaggaggatcttcttcgttttgtttg |
30989564 |
T |
 |
| Q |
234 |
taaatctccttcaacatgtatctcagcaacccctctatattgtatgattgtgacactgtgacccatacacga |
305 |
Q |
| |
|
|||| || |||||||| |||| |||||| || | | | |||||||| |||||| ||| |||||||||| |
|
|
| T |
30989565 |
taaaactttagcaacatgtccctcaacaacccttcaacagtatatgattgagacactatgatccatacacga |
30989636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 22358141 - 22358193
Alignment:
| Q |
113 |
ccatacatcatcaaatacaaaaacatacctcttttgttgcaagtggtttctca |
165 |
Q |
| |
|
||||||||||||||| || | ||||||||| |||| |||||||| |||||||| |
|
|
| T |
22358141 |
ccatacatcatcaaacactacaacataccttttttcttgcaagtagtttctca |
22358193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 22442878 - 22442930
Alignment:
| Q |
113 |
ccatacatcatcaaatacaaaaacatacctcttttgttgcaagtggtttctca |
165 |
Q |
| |
|
||||||||||||||| || | ||||||||| |||| |||||||| |||||||| |
|
|
| T |
22442878 |
ccatacatcatcaaacactacaacataccttttttcttgcaagtagtttctca |
22442930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 22635642 - 22635694
Alignment:
| Q |
113 |
ccatacatcatcaaatacaaaaacatacctcttttgttgcaagtggtttctca |
165 |
Q |
| |
|
||||||||||||||| || ||||||||||| ||| ||| ||||||||||||| |
|
|
| T |
22635642 |
ccatacatcatcaaacactaaaacatacctttttccttgaaagtggtttctca |
22635694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 310
Target Start/End: Complemental strand, 34980551 - 34980292
Alignment:
| Q |
51 |
atcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatccatggtccatacatcatcaaatacaaaaacatacctcttttgtt |
150 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||| || || |||| ||||||| || |||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
34980551 |
atcttactaccatttttattatcactcacaacatattcaatctcatcccaaaaacttgtgttccatacatcatcaaacacaaaaacatacctctttttct |
34980452 |
T |
 |
| Q |
151 |
gcaagtggtttctcaacttagaaatcaatgaccctagatccatttcagagatatcttgagaagggtcgtctcctttttgttggtaaatctccttcaacat |
250 |
Q |
| |
|
|||||| |||||||||| | ||||||||| || |||||||||||| |||||||| | ||| | ||||||||||||| ||||| || ||||||||| |
|
|
| T |
34980451 |
gcaagtaatttctcaactcataaatcaatgcatctcgatccatttcagtgatatcttcaagaggatgttctcctttttgttcgtaaagcttcttcaacat |
34980352 |
T |
 |
| Q |
251 |
gtatctcagcaacccctctatattgtatgattgtgacactgtgacccatacacgatattc |
310 |
Q |
| |
|
| ||||||||| | || ||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
34980351 |
gcgtctcagcaatacttcaatattgtatgattgtgacactgtgatccatacacgacattc |
34980292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 22 - 310
Target Start/End: Complemental strand, 34989635 - 34989347
Alignment:
| Q |
22 |
caacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatccatggtccatacatc |
121 |
Q |
| |
|
|||||||| || ||||||| ||||| ||||||||||| ||||||||||||||| ||||||||| || || |||| ||||||| || |||||||||| |
|
|
| T |
34989635 |
caacatccttatttcttgtggtaataaatatcttactaccatttttattatcactcacaacatattcaatctcatcccaaaaacttgtgttccatacatc |
34989536 |
T |
 |
| Q |
122 |
atcaaatacaaaaacatacctcttttgttgcaagtggtttctcaacttagaaatcaatgaccctagatccatttcagagatatcttgagaagggtcgtct |
221 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||| ||| |||||||||||| ||| ||| || ||| | ||| |
|
|
| T |
34989535 |
atcaaacacaaaaacatacctctttttctgcaagtactttctcaactcagaaatcaatgcacctcgatccatttcagtgattcctttaggaggtttttct |
34989436 |
T |
 |
| Q |
222 |
cctttttgttggtaaatctccttcaacatgtatctcagcaacccctctatattgtatgattgtgacactgtgacccatacacgatattc |
310 |
Q |
| |
|
||||||||| ||||| || || |||||||| |||| ||| | || | |||| ||||||||||||||||| |||||||||| |||| |
|
|
| T |
34989435 |
cctttttgtccgtaaagcttctccaacatgtgtctcgacaatacttcagtgttgtttgattgtgacactgtgatccatacacgacattc |
34989347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 310
Target Start/End: Original strand, 2305533 - 2305821
Alignment:
| Q |
22 |
caacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatccatggtccatacatc |
121 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||||||||| |||||||||| |||| ||| | ||| || || |||| ||||||| || ||||||||| |
|
|
| T |
2305533 |
caacatccatatttcttgtggtaataaatatcttactaccatttttatgatcactcatagcatattcaatctcatcccaaaaacttgtgttccatacatt |
2305632 |
T |
 |
| Q |
122 |
atcaaatacaaaaacatacctcttttgttgcaagtggtttctcaacttagaaatcaatgaccctagatccatttcagagatatcttgagaagggtcgtct |
221 |
Q |
| |
|
|||||| ||||||||||||||||| | ||||||| |||||||||| | |||||||| ||| ||||||||||| ||||||||| || | ||| |
|
|
| T |
2305633 |
atcaaacacaaaaacatacctcttattctgcaagtactttctcaactcaaaaatcaattcacctcgatccatttcatagatatctttaggtagaaattct |
2305732 |
T |
 |
| Q |
222 |
cctttttgttggtaaatctccttcaacatgtatctcagcaacccctctatattgtatgattgtgacactgtgacccatacacgatattc |
310 |
Q |
| |
|
||||||||| || || || |||||||||| |||||| ||| | |||||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
2305733 |
actttttgttcgtgaagcttcttcaacatgcatctcaacaagacttctatattgtatgattgtgacattgtgatccatacacgacattc |
2305821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 50 - 310
Target Start/End: Complemental strand, 34975772 - 34975512
Alignment:
| Q |
50 |
tatcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatccatggtccatacatcatcaaatacaaaaacatacctcttttgt |
149 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||| || || |||| ||||||| || |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
34975772 |
tatcttactaccatttttattatcactcacaacatattcaatctcatcccaaaaacttgtgttccatacatcatcaaacacaaaaacatacctctttttc |
34975673 |
T |
 |
| Q |
150 |
tgcaagtggtttctcaacttagaaatcaatgaccctagatccatttcagagatatcttgagaagggtcgtctcctttttgttggtaaatctccttcaaca |
249 |
Q |
| |
|
||||||| |||||||||| ||||||||||| ||| |||||||||||| ||| ||| || ||| | |||||||||||| ||||| || || ||||| |
|
|
| T |
34975672 |
tgcaagtactttctcaactcagaaatcaatgcacctcgatccatttcagtgattcctttaggaggtttttctcctttttgtccgtaaagcttctccaaca |
34975573 |
T |
 |
| Q |
250 |
tgtatctcagcaacccctctatattgtatgattgtgacactgtgacccatacacgatattc |
310 |
Q |
| |
|
||| |||| ||| | || | |||| ||||||||||||||||| |||||||||| |||| |
|
|
| T |
34975572 |
tgtgtctcgacaatacttcagtgttgtgtgattgtgacactgtgatccatacacgacattc |
34975512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1439 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold1439
Description:
Target: scaffold1439; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 1714 - 1808
Alignment:
| Q |
51 |
atcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatccatggtccatacatcatcaaatacaaaaacatacctctt |
145 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||| || || |||| ||||||| || |||||||||||||||| ||||||||||||||||| |
|
|
| T |
1714 |
atcttactaccatttttattatcactcacaacatattcaatctcatcccaaaaacttgtgttccatacatcatcaaacacaaaaacatacctctt |
1808 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1439; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 1641 - 1686
Alignment:
| Q |
22 |
caacatccatacttcttgttgtaatcaatatcttactcccattttt |
67 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||||||||| |||||||| |
|
|
| T |
1641 |
caacatccatatttcttgtggtaataaatatcttactaccattttt |
1686 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 40580406 - 40580354
Alignment:
| Q |
22 |
caacatccatacttcttgttgtaatcaatatcttactcccatttttattatca |
74 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||| ||||||||||||||| |
|
|
| T |
40580406 |
caacatccatacttcttgaggtaataaatatcttactaccatttttattatca |
40580354 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 27372863 - 27372821
Alignment:
| Q |
112 |
tccatacatcatcaaatacaaaaacatacctcttttgttgcaa |
154 |
Q |
| |
|
||||||||||| ||||||| | ||||||||||||||||||||| |
|
|
| T |
27372863 |
tccatacatcaccaaatacgataacatacctcttttgttgcaa |
27372821 |
T |
 |
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Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 29610855 - 29610903
Alignment:
| Q |
258 |
agcaacccctctatattgtatgattgtgacactgtgacccatacacgat |
306 |
Q |
| |
|
||||| || |||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
29610855 |
agcaatccttctatattgtatgattgtgatactgtgatccatacacgat |
29610903 |
T |
 |
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