View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11039_low_20 (Length: 313)
Name: NF11039_low_20
Description: NF11039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11039_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 5 - 295
Target Start/End: Complemental strand, 8411732 - 8411442
Alignment:
| Q |
5 |
gaggagcagagaggtatgcaaggacctcaattttcgaattcaaggagaggagtcaagcaacactttttatgataaaactcataggataaagatggcgttg |
104 |
Q |
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| T |
8411732 |
gaggaacaaagaggtatgcaaggacctcaattttcgaattcaaggagaggagtcaagcaacactttttatgataaaactcagaggataaagatggcgttg |
8411633 |
T |
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| Q |
105 |
aacgtgaattggttggctagtttgtgatagatgagattaacatcttggatcacatcacattagcgtgagtaataattttataaattaacatttggttgac |
204 |
Q |
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| T |
8411632 |
aacgtgaattggttggctagtttgtgatagatgagattaacatcttggatcacatcacattagcgtgagtaatagttttataaattaacacttggttgac |
8411533 |
T |
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| Q |
205 |
tcaaatgataagcgacacaagtatcttaaataaacattgtatttaagattcaaactttttctatttatttaatgataaatgttattagata |
295 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8411532 |
tcaaatgataagcgatccaagtatcttaaataaacattgtatttaagattcaaactttttctatttatttaatgataaatgttattagata |
8411442 |
T |
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